Pregenerated sensors for NCS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062661Ensembl transcript IDs: ENSMUST00000000199.8, ENSMUST00000150670.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTGGAGGCTCAAGGGCGGCTGGCTTTGTGGAGATGAGGAAGGCTaGGTGGGCACAGGGGCGGTGTCAGGCTGCGGTGGCCTCATGGCA | + |
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Preference number: 1 (lower is better) Translates to: AWRLKGGWLCGDEEG*VGTGAVSGCGGLMA Trigger: TGCCATGAGGCCACCGCAGCCTGACACCGCCCCTGTGCCCACCCAGCCTTCCTCATCTCCACAAAGCCAGCCGCCCTTGAGCCTCCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | CACAGCCCCCACCTTGGCCTTCCCACCTCTAGCCTCACCTCTGGCTaGACCACTGCATCCCCGGGTGCCACTGCGGCTCATCACCACCAG | + |
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Preference number: 1 (lower is better) Translates to: HSPHLGLPTSSLTSG*TTASPGATAAHHHQ Trigger: CTGGTGGTGATGAGCCGCAGTGGCACCCGGGGATGCAGTGGTCCAGCCAGAGGTGAGGCTAGAGGTGGGAAGGCCAAGGTGGGGGCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | GGGAGCAGGGAGGAGACCCGGACATGCGACAAAGCCTATCACCCTTaGCCTGCACCACCAGGCGAGGGCCTCCCTATGTCCCCCAAGACA | + |
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Preference number: 1 (lower is better) Translates to: GSREETRTCDKAYHP*PAPPGEGLPMSPKT Trigger: TGTCTTGGGGGACATAGGGAGGCCCTCGCCTGGTGGTGCAGGCCAAGGGTGATAGGCTTTGTCGCATGTCCGGGTCTCCTCCCTGCTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | AAGGCTGGGTGGGCACAGGGGCGGTGTCAGGCTGCGGTGGCCTCATaGCACAGAAAGAGGCTAGTGGTTCCCACACATCACAGCTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: KAGWAQGRCQAAVAS*HRKRLVVPTHHSSG Trigger: CCCAGAGCTGTGATGTGTGGGAACCACTAGCCTCTTTCTGTGCCATGAGGCCACCGCAGCCTGACACCGCCCCTGTGCCCACCCAGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR GCA 90 bp | CAGGGAGGAGACCCGGACATGCGACAAAGCCTATCACCCTTGGCCTaGACCACCAGGCGAGGGCCTCCCTATGTCCCCCAAGACATAGAC | + |
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Preference number: 1 (lower is better) Translates to: QGGDPDMRQSLSPLA*TTRRGPPYVPQDID Trigger: GTCTATGTCTTGGGGGACATAGGGAGGCCCTCGCCTGGTGGTGCAGGCCAAGGGTGATAGGCTTTGTCGCATGTCCGGGTCTCCTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | GTGGCTGCCGAGGGAGACAGCCGGGCGCTCAGTTTTGCAGAGGGCTaGAGCCTTTCCGTTTCGGTTTGTCGTTGTTTTGGACAAGCGGAG | + |
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Preference number: 1 (lower is better) Translates to: VAAEGDSRALSFAEG*SLSVSVCRCFGQAE Trigger: CTCCGCTTGTCCAAAACAACGACAAACCGAAACGGAAAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | GATAGGCTCCCAAGTCACCGTCGACACAAGGTGGGCAGCAGATGCTaGGAAGAGGGGGTCACAGCATTCCTGGCCCTAGAAAGGAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: DRLPSHRRHKVGSRC*EEGVTAFLALERRV Trigger: GACCCTCCTTTCTAGGGCCAGGAATGCTGTGACCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGGGAGCCTATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR GCA 90 bp | CACCTACCCAGCCTCTTAGCATCAGGGAGGCTGAGGCCAGCAGTTTaGAGGGAAACCCACTTCATACGCTCTCTACTGTGTGCCGGACAC | + |
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Preference number: 1 (lower is better) Translates to: HLPSLLASGRLRPAV*RETHFIRSLLCAGH Trigger: GTGTCCGGCACACAGTAGAGAGCGTATGAAGTGGGTTTCCCTGCAAACTGCTGGCCTCAGCCTCCCTGATGCTAAGAGGCTGGGTAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR GCA 90 bp | GGTCCTCAGGCTGCACAGAAGAGGCCTGGCCTCAGATTCTGGGCGTaGTGTGTGCCTCAGCTAACTGCTGGTGAAAGAGAGACAGACATC | + |
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Preference number: 1 (lower is better) Translates to: GPQAAQKRPGLRFWA*CVPQLTAGERETDI Trigger: GATGTCTGTCTCTCTTTCACCAGCAGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGCAGCCTGAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR GCA 90 bp | GAACCCCTAGGAGCACCAACCCACACAACGCTGGCCTGTCACCCCTaGAAGGTGGCTGACCTCTTTCTGAGGCATGGAGAAACAGATCCA | + |
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Preference number: 1 (lower is better) Translates to: EPLGAPTHTTLACHP*KVADLFLRHGETDP Trigger: TGGATCTGTTTCTCCATGCCTCAGAAAGAGGTCAGCCACCTTGCAGGGGTGACAGGCCAGCGTTGTGTGGGTTGGTGCTCCTAGGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | TGGAGAGGTCCTCAGGCTGCACAGAAGAGGCCTGGCCTCAGATTCTaGGCGTGCTGTGTGCCTCAGCTAACTGCTGGTGAAAGAGAGACA | + |
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Preference number: 1 (lower is better) Translates to: WRGPQAAQKRPGLRF*ACCVPQLTAGERET Trigger: TGTCTCTCTTTCACCAGCAGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGCAGCCTGAGGACCTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | TGGCCTCACTGGCTGGACCACACCCCTAAAGAAAGCAGCATCAGATaGGGTGGGGCCTCTGTGGAAATGAACTTGGAGAGGTCCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: WPHWLDHTPKESSIR*GGASVEMNLERSSG Trigger: GCCTGAGGACCTCTCCAAGTTCATTTCCACAGAGGCCCCACCCCATCTGATGCTGCTTTCTTTAGGGGTGTGGTCCAGCCAGTGAGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR TCA 90 bp | AGACTACAAAGTCCCAGAGAAGCCATGGTTGCCCGCTCCTCCTGGTaGCAAGTATGGAGCCATCTCTCTGGCTCTGGACCCAGTCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: RLQSPREAMVARSSW*QVWSHLSGSGPSPE Trigger: CTCAGGACTGGGTCCAGAGCCAGAGAGATGGCTCCATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR GCA 90 bp | CATCAGTCAGCACGCGTCCTTGAACAAAAACAGTGTCCCACACCCTaGCAGGAAAAGGCAGCCCAGGGCTGTCTCAAAGTCCGAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: HQSARVLEQKQCPTP*QEKAAQGCLKVRGL Trigger: CAAGCCTCGGACTTTGAGACAGCCCTGGGCTGCCTTTTCCTGGCAGGGTGTGGGACACTGTTTTTGTTCAAGGACGCGTGCTGACTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR TCA 90 bp | CCTTTCCGTTTCGGTTTGTCGTTGTTTTGGACAAGCGGAGGTTGTTaGCGATTGGAACCAGTGGCTTCAGGCGGCAGGTGGATGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: PFRFGLSLFWTSGGC*RLEPVASGGRWMQG Trigger: GCCCTGCATCCACCTGCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACAAACCGAAACGGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR TCA 90 bp | CTGGTGACAAGTATGGAGCCATCTCTCTGGCTCTGGACCCAGTCCTaGGGACCAACAGGGCCTGGTGTTATCCTCCTACCCCTTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LVTSMEPSLWLWTQS*GPTGPGVILLPLLS Trigger: AGAAAGAAGGGGTAGGAGGATAACACCAGGCCCTGTTGGTCCTCAGGACTGGGTCCAGAGCCAGAGAGATGGCTCCATACTTGTCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR GCA 90 bp | CTGATCGAGAAGGGAAAGACTACAAAGTCCCAGAGAAGCCATGGTTaGCCGCTCCTCCTGGTGACAAGTATGGAGCCATCTCTCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: LIEKGKTTKSQRSHG*PLLLVTSMEPSLWL Trigger: GAGCCAGAGAGATGGCTCCATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTTCTCGATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR TCA 90 bp | GGACAGCTGAGTCTCCAGAGACCAGAGAGAGGGCCTCTCAACCTATaGCACCACATCTACTCTCTAGGACATGTCAGGGATCAAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: GQLSLQRPERGPLNL*HHIYSLGHVRDQAG Trigger: TCCTGCTTGATCCCTGACATGTCCTAGAGAGTAGATGTGGTGTCATAGGTTGAGAGGCCCTCTCTCTGGTCTCTGGAGACTCAGCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | ACACATCTTGTCCATCATGGCAAAGATCCGGTCCACCCTCTTCTCTaGTGTGTTCTCTTCTTCTGGGAGCTCCACGGTGTTCCCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: THLVHHGKDPVHPLL*CVLFFWELHGVPHH Trigger: ATGGTGGGGAACACCGTGGAGCTCCCAGAAGAAGAGAACACACCAGAGAAGAGGGTGGACCGGATCTTTGCCATGATGGACAAGATGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
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| 3UTR TCA 90 bp | TGGCCTCAGATTCTGGGCGTGCTGTGTGCCTCAGCTAACTGCTGGTaGAAGAGAGACAGACATCAGTCAGCACGCGTCCTTGAACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: WPQILGVLCASANCW*KRDRHQSARVLEQK Trigger: TTTTTGTTCAAGGACGCGTGCTGACTGATGTCTGTCTCTCTTTCACCAGCAGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR TCA 90 bp | AAAAACCCTCAGTTTCTCCACAAAACGCACAATACTGTTATCACGTaGGCCACTGCCACTAACACCCTTGCTGCCAGCAGCCTCACTGGC | + |
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Preference number: 1 (lower is better) Translates to: KNPQFLHKTHNTVIT*ATATNTLAASSLTG Trigger: GCCAGTGAGGCTGCTGGCAGCAAGGGTGTTAGTGGCAGTGGCTCACGTGATAACAGTATTGTGCGTTTTGTGGAGAAACTGAGGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | GATGACCCAAAGAGGTCTCAAAGAAAATTTCCCTGTGGGATCTGGTaGGCTAGCAATGGGCACAGCATGAGCAAAGGGTCTACCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: DDPKRSQRKFPCGIW*ASNGHSMSKGSTQE Trigger: TTCCTGGGTAGACCCTTTGCTCATGCTGTGCCCATTGCTAGCCCACCAGATCCCACAGGGAAATTTTCTTTGAGACCTCTTTGGGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | GGGCGTCCCCATGCATCTTTAGATCATGTAAATGCAGAAACACACTaGAAAGAATCTTGGAGGCTTTCTGCTTGGCCAGCAGTGGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GRPHASLDHVNAETH*KESWRLSAWPAVGA Trigger: AGCCCCCACTGCTGGCCAAGCAGAAAGCCTCCAAGATTCTTTCCAGTGTGTTTCTGCATTTACATGATCTAAAGATGCATGGGGACGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR GCA 90 bp | TCATGTAAATGCAGAAACACACTGGAAAGAATCTTGGAGGCTTTCTaGTTGGCCAGCAGTGGGGGCTTTCTCAGGAGAGATGCCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SCKCRNTLERILEAF*LASSGGFLRRDARD Trigger: ATCCCTGGCATCTCTCCTGAGAAAGCCCCCACTGCTGGCCAAGCAGAAAGCCTCCAAGATTCTTTCCAGTGTGTTTCTGCATTTACATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR TCA 90 bp | CACCACATCTACTCTCTAGGACATGTCAGGGATCAAGCAGGAAGATaGCCCAAAGAGGTCTCAAAGAAAATTTCCCTGTGGGATCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: HHIYSLGHVRDQAGR*PKEVSKKISLWDLV Trigger: CACCAGATCCCACAGGGAAATTTTCTTTGAGACCTCTTTGGGTCATCTTCCTGCTTGATCCCTGACATGTCCTAGAGAGTAGATGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | CAGAGCAGAAGAAAAATCCGGGAACCAATTTCCCCCTCTCAATGGTaGGCAGAGAGGTTACACAAACTAGAAGCAAGAACTGTGAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: QSRRKIREPISPSQW*AERLHKLEARTVSL Trigger: TAAGCTCACAGTTCTTGCTTCTAGTTTGTGTAACCTCTCTGCCCACCATTGAGAGGGGGAAATTGGTTCCCGGATTTTTCTTCTGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CCA 90 bp | CCACAGGTCATTAGCAAGGAAGATTTTGGTCTCCCAGAAGTATGCTaGAGATTACAGGAGAGTCAGAGCAGAAGAAAAATCCGGGAACCA | + |
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Preference number: 1 (lower is better) Translates to: PQVISKEDFGLPEVC*RLQESQSRRKIREP Trigger: TGGTTCCCGGATTTTTCTTCTGCTCTGACTCTCCTGTAATCTCCAGCATACTTCTGGGAGACCAAAATCTTCCTTGCTAATGACCTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CAA 90 bp | CGGGAGCAGGGAGGAGACCCGGACATGCGACAAAGCCTATCACCCTaGGCCTGCACCACCAGGCGAGGGCCTCCCTATGTCCCCCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: REQGGDPDMRQSLSP*ACTTRRGPPYVPQD Trigger: GTCTTGGGGGACATAGGGAGGCCCTCGCCTGGTGGTGCAGGCCAAGGGTGATAGGCTTTGTCGCATGTCCGGGTCTCCTCCCTGCTCCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCCAAGTCACCGTCGACACAAGGTGGGCAGCAGATGCTGGGAAGAGGGGGTGGAGATGAGGAAGGCTaGGTGGGCACAGGGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: APKSPSTQGGQQMLGRGGGDEEG*VGTGAV Trigger: CACCGCCCCTGTGCCCACCCAGCCTTCCTCATCTCC...ACCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCCAAGTCACCGTCGACACAAGGTGGGCAGCAGATGCTGGGAAGAGGGGGTAAGAGAACCAGGGCCTaGAGGCTCAAGGGCGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: APKSPSTQGGQQMLGRGGKRTRA*RLKGGW Trigger: CCAGCCGCCCTTGAGCCTCCAGGCCCTGGTTCTCTT...ACCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGGGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGTGGGGGCTTTCTCAGGAGAGATGCCAGGGATCCCCAGGGACTGCACACTGGCTTCTTGGCCGCTaGAGGCCACCATCCTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: QQWGLSQERCQGSPGTAHWLLGR*RPPSSQ Trigger: TTGGGAGGATGGTGGCCTGCAGCGGCCAAGAAGCCA...GTGTGCAGTCCCTGGGGATCCCTGGCATCTCTCCTGAGAAAGCCCCCACTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAGTCACCGTCGACACAAGGTGGGCAGCAGATGCTGGGAAGAGGGGGTCAATGAGGAAGGCTGGGTaGGCACAGGGGCGGTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SQVTVDTRWAADAGKRGSMRKAG*AQGRCQ Trigger: CTGACACCGCCCCTGTGCCCACCCAGCCTTCCTCAT...TGACCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTGGGGGCTTTCTCAGGAGAGATGCCAGGGATCCCCAGGGACTGCACACGTCCCAGAGAAGCCATaGTTGCCCGCTCCTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QQWGLSQERCQGSPGTAHVPEKP*LPAPPG Trigger: ACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGAC...GTGTGCAGTCCCTGGGGATCCCTGGCATCTCTCCTGAGAAAGCCCCCACTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTGGGGGCTTTCTCAGGAGAGATGCCAGGGATCCCCAGGGACTGCACACGCTGCGGTGGCCTCATaGCACAGAAAGAGGCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: QQWGLSQERCQGSPGTAHAAVAS*HRKRLV Trigger: CACTAGCCTCTTTCTGTGCCATGAGGCCACCGCAGC...GTGTGCAGTCCCTGGGGATCCCTGGCATCTCTCCTGAGAAAGCCCCCACTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGCCGAGGGAGACAGCCGGGCGCTCAGTTTTGCAGAGGGCTGGAGCCTTGAGGTTGTTGACGATTaGAACCAGTGGCTTCAGGCG | + |
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Preference number: 2 (lower is better) Translates to: VAAEGDSRALSFAEGWSLEVVDD*NQWLQA Trigger: CGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTC...AAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CAA 90 bp | GGAAGAATGGGGTGGCTGCCGAGGGAGACAGCCGGGCGCTCAGTTTaGCAGAGGGCTGGAGCCTTTCCGTTTCGGTTTGTCGTTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: GRMGWLPRETAGRSV*QRAGAFPFRFVVVL Trigger: CAAAACAACGACAAACCGAAACGGAAAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCACCCCATTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGTGGGGGCTTTCTCAGGAGAGATGCCAGGGATCCCCAGGGACTGCACACCTCAGATTCTGGGCGTaGTGTGTGCCTCAGCTAACT | + |
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Preference number: 2 (lower is better) Translates to: QQWGLSQERCQGSPGTAHLRFWA*CVPQLT Trigger: AGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAG...GTGTGCAGTCCCTGGGGATCCCTGGCATCTCTCCTGAGAAAGCCCCCACTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | GCACAGAAGAGGCCTGGCCTCAGATTCTGGGCGTGCTGTGTGCCTCAGCTAACTTTCCCACCACAGGGATaGACAGGCAGCCAAAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AQKRPGLRFWACCVPQLTFPPQG*TGSQSH Trigger: GTGGCTTTGGCTGCCTGTCCATCCCTGTGGTGGGAA...AGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR TCA 90 bp | GGACTGCACACCCCACTATCTCCTAGAAGAGACAAGGTCCCCCAAAGTGCAAAGGTCTGCCTCTGCAGCTaGGAGGCTCACCCCGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GLHTPLSPRRDKVPQSAKVCLCS*EAHPGK Trigger: CTTTCCGGGGTGAGCCTCTCAGCTGCAGAGGCAGAC...CTTTGCACTTTGGGGGACCTTGTCTCTTCTAGGAGATAGTGGGGTGTGCAGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCACCAACCCACACAACGCTGGCCTGTCACCCCTGCAAGGTGGCTGACCTCAGGGAAGAAGACTACTaGAAAAAGCAGTCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GAPTHTTLACHPCKVADLREEDY*KKQSGQ Trigger: CTGCCCTGACTGCTTTTTGCAGTAGTCTTCTTCCCT...GAGGTCAGCCACCTTGCAGGGGTGACAGGCCAGCGTTGTGTGGGTTGGTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCATCAGGGAGGCTGAGGCCAGCAGTTTGCAGGGAAACCCACTTCATACGCGGACAGCAGGAAGAATaGGGTGGCTGCCGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LASGRLRPAVCRETHFIRGQQEE*GGCRGR Trigger: TCTCCCTCGGCAGCCACCCCATTCTTCCTGCTGTCC...GCGTATGAAGTGGGTTTCCCTGCAAACTGCTGGCCTCAGCCTCCCTGATGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAGGGCAAAGCTTCCCACTGTGCCCTTATGCCAACTACCTTGCCAGTCCCACCGTCGACACAAGGTaGGCAGCAGATGCTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LGGQSFPLCPYANYLASPTVDTR*AADAGK Trigger: CTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGT...GGGACTGGCAAGGTAGTTGGCATAAGGGCACAGTGGGAAGCTTTGCCCTCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CAA 90 bp | ACACCTACCCAGCCTCTTAGCATCAGGGAGGCTGAGGCCAGCAGTTaGCAGGGAAACCCACTTCATACGCTCTCTACTGTGTGCCGGACA | + |
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Preference number: 2 (lower is better) Translates to: TPTQPLSIREAEASS*QGNPLHTLSTVCRT Trigger: TGTCCGGCACACAGTAGAGAGCGTATGAAGTGGGTTTCCCTGCAAACTGCTGGCCTCAGCCTCCCTGATGCTAAGAGGCTGGGTAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR TCA 90 bp | GGACTGCACACCCCACTATCTCCTAGAAGAGACAAGGTCCCCCAAAGTGCAAAGCTGGCTTTGTGGAGATaGGGAAGGCTGGGTGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GLHTPLSPRRDKVPQSAKLALWR*GRLGGH Trigger: GTGCCCACCCAGCCTTCCTCATCTCCACAAAGCCAG...CTTTGCACTTTGGGGGACCTTGTCTCTTCTAGGAGATAGTGGGGTGTGCAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGGGGTGCCATCAGACACAGTCAGCCTCTGAGGCAGACCACACACTCCGGCCTGAGGCCAGCAGTTTaGAGGGAAACCCACTTCATA | + |
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Preference number: 2 (lower is better) Translates to: KGGAIRHSQPLRQTTHSGLRPAV*RETHFI Trigger: TATGAAGTGGGTTTCCCTGCAAACTGCTGGCCTCAG...GCCGGAGTGTGTGGTCTGCCTCAGAGGCTGACTGTGTCTGATGGCACCCCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGCATCAGGGAGGCTGAGGCCAGCAGTTTGCAGGGAAACCCACTTCATACGCGGTGTCAGGCTGCGGTaGCCTCATGGCACAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LASGRLRPAVCRETHFIRGVRLR*PHGTER Trigger: TCTTTCTGTGCCATGAGGCCACCGCAGCCTGACACC...GCGTATGAAGTGGGTTTCCCTGCAAACTGCTGGCCTCAGCCTCCCTGATGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR CAA 90 bp | GCCTTTCCGTTTCGGTTTGTCGTTGTTTTGGACAAGCGGAGGTTGTaGACGATTGGAACCAGTGGCTTCAGGCGGCAGGTGGATGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: AFPFRFVVVLDKRRL*TIGTSGFRRQVDAG Trigger: CCCTGCATCCACCTGCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACAAACCGAAACGGAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| 3UTR-3UTR CCA 90 bp | GCACAGAAGAGGCCTGGCCTCAGATTCTGGGCGTGCTGTGTGCCTCAGCTAACTAGTTTTGCAGAGGGCTaGAGCCTTTCCGTTTCGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AQKRPGLRFWACCVPQLTSFAEG*SLSVSV Trigger: AACCGAAACGGAAAGGCTCCAGCCCTCTGCAAAACT...AGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGAGGGCAAAGCTTCCCACTGTGCCCTTATGCCAACTACCTTGCCAGTCCCCAGCATCAGATGGGGTaGGGCCTCTGTGGAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: LGGQSFPLCPYANYLASPQHQMG*GLCGNE Trigger: TTCATTTCCACAGAGGCCCCACCCCATCTGATGCTG...GGGACTGGCAAGGTAGTTGGCATAAGGGCACAGTGGGAAGCTTTGCCCTCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 90 bp | GGAGCCTTTCCGTTTCGGTTTGTCGTTGTTTTGGACAAGCGGAGGTaGTTGACGATTGGAACCAGTGGCTTCAGGCGGCAGGTGGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: GAFPFRFVVVLDKRR*LTIGTSGFRRQVDA Trigger: TGCATCCACCTGCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACAAACCGAAACGGAAAGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 90 bp | GCTGATCGAGAAGGGAAAGACTACAAAGTCCCAGAGAAGCCATGGTaGCCCGCTCCTCCTGGTGACAAGTATGGAGCCATCTCTCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ADREGKDYKVPEKPW*PAPPGDKYGAISLA Trigger: AGCCAGAGAGATGGCTCCATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTTCTCGATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGGGGTGCCATCAGACACAGTCAGCCTCTGAGGCAGACCACACACTCCGGCTGCCCAGAGACTATATaGGGGTTGTACTGTCATTCA | + |
|
Preference number: 2 (lower is better) Translates to: KGGAIRHSQPLRQTTHSGCPETI*GLYCHS Trigger: TGAATGACAGTACAACCCTCATATAGTCTCTGGGCA...GCCGGAGTGTGTGGTCTGCCTCAGAGGCTGACTGTGTCTGATGGCACCCCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR GCA 90 bp | GACTACAAAGTCCCAGAGAAGCCATGGTTGCCCGCTCCTCCTGGTGACAAGTATACGCTCTCTACTGTGTaGCGGACACACTCTCCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: DYKVPEKPWLPAPPGDKYTLSTV*RTHSPS Trigger: GCTAGGAGAGTGTGTCCGGCACACAGTAGAGAGCGT...ATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAATGTCCACTGACAGAGGGACAGCTGAGTCTCCAGAGACCAGAGAGAGGGCCAGATTTTTGGCTTCTTaGCCGCTGCAGGCCACCATC | + |
|
Preference number: 2 (lower is better) Translates to: KMSTDRGTAESPETRERARFLAS*PLQATI Trigger: GATGGTGGCCTGCAGCGGCCAAGAAGCCAAAAATCT...GGCCCTCTCTCTGGTCTCTGGAGACTCAGCTGTCCCTCTGTCAGTGGACATTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | GACTACAAAGTCCCAGAGAAGCCATGGTTGCCCGCTCCTCCTGGTGACAAGTATCTCCAGGGCAGAAGCTaGGGGAACAGTACATTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: DYKVPEKPWLPAPPGDKYLQGRS*GNSTLA Trigger: GGCTAATGTACTGTTCCCCCAGCTTCTGCCCTGGAG...ATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCACCAACCCACACAACGCTGGCCTGTCACCCCTGCAAGGTGGCTGACCTCAATGCAGAAACACACTaGAAAGAATCTTGGAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: GAPTHTTLACHPCKVADLNAETH*KESWRL Trigger: AAGCCTCCAAGATTCTTTCCAGTGTGTTTCTGCATT...GAGGTCAGCCACCTTGCAGGGGTGACAGGCCAGCGTTGTGTGGGTTGGTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGAGGGCAAAGCTTCCCACTGTGCCCTTATGCCAACTACCTTGCCAGTCCCAACCTGGCTAGATACTaGAAAGTCGTGATAGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGGQSFPLCPYANYLASPNLARY*KVVIGS Trigger: GGAGCCTATCACGACTTTTCAGTATCTAGCCAGGTT...GGGACTGGCAAGGTAGTTGGCATAAGGGCACAGTGGGAAGCTTTGCCCTCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGAAGAGGCCTGGCCTCAGATTCTGGGCGTGCTGTGTGCCTCAGCTAACTGAGGCCTTCTCCCAATaGTCAGTATCCTTTAGAACA | + |
|
Preference number: 2 (lower is better) Translates to: AQKRPGLRFWACCVPQLTEAFSQ*SVSFRT Trigger: TGTTCTAAAGGATACTGACCATTGGGAGAAGGCCTC...AGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCATTCATACGATCCTGTGCCCTCCAGACTAGAAAACCCAGCCATAGAACAGTGCCAGCAGCCTCACTaGCCCTGGTCACCACCACTT | + |
|
Preference number: 2 (lower is better) Translates to: CHSYDPVPSRLENPAIEQCQQPH*PWSPPL Trigger: AAGTGGTGGTGACCAGGGCCAGTGAGGCTGCTGGCA...CTGTTCTATGGCTGGGTTTTCTAGTCTGGAGGGCACAGGATCGTATGAATGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCTCAGCTAACTGCTGGTGAAAGAGAGACAGACATCAGTCAGCACGCGTCCATTTCCCCCTCTCAATaGTGGGCAGAGAGGTTACAC | + |
|
Preference number: 2 (lower is better) Translates to: VPQLTAGERETDISQHASISPSQ*WAERLH Trigger: GTGTAACCTCTCTGCCCACCATTGAGAGGGGGAAAT...GGACGCGTGCTGACTGATGTCTGTCTCTCTTTCACCAGCAGTTAGCTGAGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACTGCACACCCCACTATCTCCTAGAAGAGACAAGGTCCCCCAAAGTGCAAAGGATCAAGCAGGAAGATaGCCCAAAGAGGTCTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: GLHTPLSPRRDKVPQSAKDQAGR*PKEVSK Trigger: CTTTGAGACCTCTTTGGGTCATCTTCCTGCTTGATC...CTTTGCACTTTGGGGGACCTTGTCTCTTCTAGGAGATAGTGGGGTGTGCAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGCATCAGGGAGGCTGAGGCCAGCAGTTTGCAGGGAAACCCACTTCATACGCTCCCCTCTCCAAAAATaGGGCACAGTATCTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LASGRLRPAVCRETHFIRSPLQK*GTVSEK Trigger: TTTCTCAGATACTGTGCCCCATTTTTGGAGAGGGGA...GCGTATGAAGTGGGTTTCCCTGCAAACTGCTGGCCTCAGCCTCCCTGATGCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR TCA 90 bp | CACATCTTGTCCATCATGGCAAAGATCCGGTCCACCCTCTTCTCTGGTGTGTTCCCAAGTCATAAAGCTTaGAGGCCCATCGCAGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: HILSIMAKIRSTLFSGVFPSHKA*RPIAAF Trigger: AAAAGCTGCGATGGGCCTTCAAGCTTTATGACTTGG...GAACACACCAGAGAAGAGGGTGGACCGGATCTTTGCCATGATGGACAAGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
||
| 3UTR-3UTR CCA 90 bp | GATTACAGGAGAGTCAGAGCAGAAGAAAAATCCGGGAACCAATTTCCCCCTCTCAGAGGAAAAGATTTTTaGCTTCTTGGCCGCTGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: DYRRVRAEEKSGNQFPPLRGKDF*LLGRCR Trigger: CCTGCAGCGGCCAAGAAGCCAAAAATCTTTTCCTCT...GAGAGGGGGAAATTGGTTCCCGGATTTTTCTTCTGCTCTGACTCTCCTGTAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CCA 90 bp | GACATGTCAGGGATCAAGCAGGAAGATGACCCAAAGAGGTCTCAAAGAAAATTTAGGGACTCAAGAGTCTaGGAAATCCTAAAGAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: DMSGIKQEDDPKRSQRKFRDSRV*EILKRG Trigger: GCCCCTCTTTAGGATTTCCCAGACTCTTGAGTCCCT...AAATTTTCTTTGAGACCTCTTTGGGTCATCTTCCTGCTTGATCCCTGACATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | CTCAAGGGCGGCTGGCTTTGTGGAGATGAGGAAGGCTaGGTGGGCACAGGGGCGGTGTCAGGCTGCGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LKGGWLCGDEEG*VGTGAVSGCGG Trigger: GCCACCGCAGCCTGACACCGCCCCTGTGCCCACCCAGCCTTCCTCATCTCCACAAAGCCAGCCGCCCTTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | GGGGTCACAGCATTCCTGGCCCTAGAAAGGAGGGTCTaGCGAGGTACCAGGGGCCTGGCCTCACTGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GVTAFLALERRV*RGTRGLASLAG Trigger: TCCAGCCAGTGAGGCCAGGCCCCTGGTACCTCGGCAGACCCTCCTTTCTAGGGCCAGGAATGCTGTGACCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | GGTGGCTGCCGAGGGAGACAGCCGGGCGCTCAGTTTTaGAGAGGGCTGGAGCCTTTCCGTTTCGGTTTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: GGCRGRQPGAQF*RGLEPFRFGLS Trigger: CGACAAACCGAAACGGAAAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | AGCACACAGGCCGGACAGCAGGAAGAATGGGGTGGCTaGCGAGGGAGACAGCCGGGCGCTCAGTTTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: STQAGQQEEWGG*RGRQPGAQFCR Trigger: TCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCACCCCATTCTTCCTGCTGTCCGGCCTGTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | GACCCGGACATGCGACAAAGCCTATCACCCTTGGCCTaGACCACCAGGCGAGGGCCTCCCTATGTCCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DPDMRQSLSPLA*TTRRGPPYVPQ Trigger: TTGGGGGACATAGGGAGGCCCTCGCCTGGTGGTGCAGGCCAAGGGTGATAGGCTTTGTCGCATGTCCGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | GGGAAGAGAACCAGGGCCTGGAGGCTCAAGGGCGGCTaGCTTTGTGGAGATGAGGAAGGCTGGGTGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: GKRTRAWRLKGG*LCGDEEGWVGT Trigger: TGTGCCCACCCAGCCTTCCTCATCTCCACAAAGCCAGCCGCCCTTGAGCCTCCAGGCCCTGGTTCTCTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | GAGGAGACCCGGACATGCGACAAAGCCTATCACCCTTaGCCTGCACCACCAGGCGAGGGCCTCCCTATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EETRTCDKAYHP*PAPPGEGLPMS Trigger: GGACATAGGGAGGCCCTCGCCTGGTGGTGCAGGCCAAGGGTGATAGGCTTTGTCGCATGTCCGGGTCTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | TGGGCACAGGGGCGGTGTCAGGCTGCGGTGGCCTCATaGCACAGAAAGAGGCTAGTGGTTCCCACACATCAC | + |
|
Preference number: 3 (lower is better) Translates to: WAQGRCQAAVAS*HRKRLVVPTHH Trigger: GTGATGTGTGGGAACCACTAGCCTCTTTCTGTGCCATGAGGCCACCGCAGCCTGACACCGCCCCTGTGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | AGAAAGCACACAGGCCGGACAGCAGGAAGAATGGGGTaGCTGCCGAGGGAGACAGCCGGGCGCTCAGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RKHTGRTAGRMG*LPRETAGRSVL Trigger: CAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCACCCCATTCTTCCTGCTGTCCGGCCTGTGTGCTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | GGTCTGCCGAGGTACCAGGGGCCTGGCCTCACTGGCTaGACCACACCCCTAAAGAAAGCAGCATCAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLPRYQGPGLTG*TTPLKKAASDG Trigger: CCCATCTGATGCTGCTTTCTTTAGGGGTGTGGTCCAGCCAGTGAGGCCAGGCCCCTGGTACCTCGGCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | GGAGGGTCTGCCGAGGTACCAGGGGCCTGGCCTCACTaGCTGGACCACACCCCTAAAGAAAGCAGCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGSAEVPGAWPH*LDHTPKESSIR Trigger: TCTGATGCTGCTTTCTTTAGGGGTGTGGTCCAGCCAGTGAGGCCAGGCCCCTGGTACCTCGGCAGACCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | CTGTGCCCTTATGCCAACTACCTTGCCAGTCCCAGCTaGCCTAGCAGAGGTGTGGGTGGGAGGCATGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LCPYANYLASPS*PSRGVGGRHAA Trigger: GGCAGCATGCCTCCCACCCACACCTCTGCTAGGTCAGCTGGGACTGGCAAGGTAGTTGGCATAAGGGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | CTCCCAAGTCACCGTCGACACAAGGTGGGCAGCAGATaGTGGGAAGAGGGGGTCACAGCATTCCTGGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LPSHRRHKVGSR*WEEGVTAFLAL Trigger: TAGGGCCAGGAATGCTGTGACCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | AGTCCCAGAGAAGCCATGGTTGCCCGCTCCTCCTGGTaGCAAGTATGGAGCCATCTCTCTGGCTCTGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: SPREAMVARSSW*QVWSHLSGSGP Trigger: GGGTCCAGAGCCAGAGAGATGGCTCCATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | CCTCAGGCTGCACAGAAGAGGCCTGGCCTCAGATTCTaGGCGTGCTGTGTGCCTCAGCTAACTGCTGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PQAAQKRPGLRF*ACCVPQLTAGE Trigger: TTCACCAGCAGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGCAGCCTGAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | AACTTGGAGAGGTCCTCAGGCTGCACAGAAGAGGCCTaGCCTCAGATTCTGGGCGTGCTGTGTGCCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NLERSSGCTEEA*PQILGVLCASA Trigger: AGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGCAGCCTGAGGACCTCTCCAAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | CCAAGTCACCGTCGACACAAGGTGGGCAGCAGATGCTaGGAAGAGGGGGTCACAGCATTCCTGGCCCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSHRRHKVGSRC*EEGVTAFLALE Trigger: TTCTAGGGCCAGGAATGCTGTGACCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGTGGGGGCTTTCTCAGGAGAGATGCCAGGGATCCCCAGGGACTGCACACAAGATTTTTGGCTTCTaGGCCGCTGCAGGCCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QQWGLSQERCQGSPGTAHKIFGF*AAAGHH Trigger: ATGGTGGCCTGCAGCGGCCAAGAAGCCAAAAATCTT...GTGTGCAGTCCCTGGGGATCCCTGGCATCTCTCCTGAGAAAGCCCCCACTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | AGTATGGAGCCATCTCTCTGGCTCTGGACCCAGTCCTaGGGACCAACAGGGCCTGGTGTTATCCTCCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: SMEPSLWLWTQS*GPTGPGVILLP Trigger: GGGTAGGAGGATAACACCAGGCCCTGTTGGTCCTCAGGACTGGGTCCAGAGCCAGAGAGATGGCTCCATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | GCTGCACAGAAGAGGCCTGGCCTCAGATTCTGGGCGTaGTGTGTGCCTCAGCTAACTGCTGGTGAAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AAQKRPGLRFWA*CVPQLTAGERE Trigger: CTCTCTTTCACCAGCAGTTAGCTGAGGCACACAGCACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | GCCTCTGTGGAAATGAACTTGGAGAGGTCCTCAGGCTaGACAGAAGAGGCCTGGCCTCAGATTCTGGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: ASVEMNLERSSG*TEEAWPQILGV Trigger: CACGCCCAGAATCTGAGGCCAGGCCTCTTCTGTGCAGCCTGAGGACCTCTCCAAGTTCATTTCCACAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | CTGGCTCTGGACCCAGTCCTGAGGACCAACAGGGCCTaGTGTTATCCTCCTACCCCTTCTTTCTCAGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LALDPVLRTNRA*CYPPTPSFSDS Trigger: GGAGTCTGAGAAAGAAGGGGTAGGAGGATAACACCAGGCCCTGTTGGTCCTCAGGACTGGGTCCAGAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCCATCTCTCTGGCTCTGGACCCAGTCCTGAGGACCAACAGGGCCTGGTGTAAGAGGAAAAGATTTTaGGCTTCTTGGCCGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GAISLALDPVLRTNRAWCKRKRF*ASWPLQ Trigger: CTGCAGCGGCCAAGAAGCCAAAAATCTTTTCCTCTT...ACACCAGGCCCTGTTGGTCCTCAGGACTGGGTCCAGAGCCAGAGAGATGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | GCACGCGTCCTTGAACAAAAACAGTGTCCCACACCCTaGCAGGAAAAGGCAGCCCAGGGCTGTCTCAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ARVLEQKQCPTP*QEKAAQGCLKV Trigger: GACTTTGAGACAGCCCTGGGCTGCCTTTTCCTGGCAGGGTGTGGGACACTGTTTTTGTTCAAGGACGCGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | GAGGGAGACAGCCGGGCGCTCAGTTTTGCAGAGGGCTaGAGCCTTTCCGTTTCGGTTTGTCGTTGTTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EGDSRALSFAEG*SLSVSVCRCFG Trigger: TCCAAAACAACGACAAACCGAAACGGAAAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAAGTCACCGTCGACACAAGGTGGGCAGCAGATGCTGGGAAGAGGGGGTCATGGAATCACTGGGTCTaGATGCCACCAAAAATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQVTVDTRWAADAGKRGSWNHWV*MPPKMS Trigger: GGACATTTTTGGTGGCATCAAGACCCAGTGATTCCA...TGACCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | TGTCGTTGTTTTGGACAAGCGGAGGTTGTTGACGATTaGAACCAGTGGCTTCAGGCGGCAGGTGGATGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CRCFGQAEVVDD*NQWLQAAGGCR Trigger: CCTGCATCCACCTGCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | CGAGAAGGGAAAGACTACAAAGTCCCAGAGAAGCCATaGTTGCCCGCTCCTCCTGGTGACAAGTATGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: REGKDYKVPEKP*LPAPPGDKYGA Trigger: GGCTCCATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTTCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | TGGCTGGACCACACCCCTAAAGAAAGCAGCATCAGATaGGGTGGGGCCTCTGTGGAAATGAACTTGGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WLDHTPKESSIR*GGASVEMNLER Trigger: CCTCTCCAAGTTCATTTCCACAGAGGCCCCACCCCATCTGATGCTGCTTTCTTTAGGGGTGTGGTCCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | TTCGGTTTGTCGTTGTTTTGGACAAGCGGAGGTTGTTaGCGATTGGAACCAGTGGCTTCAGGCGGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FGLSLFWTSGGC*RLEPVASGGRW Trigger: CCACCTGCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACAAACCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | ATTCTGGGCGTGCTGTGTGCCTCAGCTAACTGCTGGTaGAAGAGAGACAGACATCAGTCAGCACGCGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ILGVLCASANCW*KRDRHQSARVL Trigger: AAGGACGCGTGCTGACTGATGTCTGTCTCTCTTTCACCAGCAGTTAGCTGAGGCACACAGCACGCCCAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | GCCACTGCGGCTCATCACCACCAGGGGGCGTCCCCATaGATCTTTAGATCATGTAAATGCAGAAACACACTG | + |
|
Preference number: 3 (lower is better) Translates to: ATAAHHHQGASP*IFRSCKCRNTL Trigger: CAGTGTGTTTCTGCATTTACATGATCTAAAGATGCATGGGGACGCCCCCTGGTGGTGATGAGCCGCAGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | GTCCATCATGGCAAAGATCCGGTCCACCCTCTTCTCTaGTGTGTTCTCTTCTTCTGGGAGCTCCACGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VHHGKDPVHPLL*CVLFFWELHGV Trigger: AACACCGTGGAGCTCCCAGAAGAAGAGAACACACCAGAGAAGAGGGTGGACCGGATCTTTGCCATGATGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
||
| 3UTR GCA 72 bp | AAGGGAAAGACTACAAAGTCCCAGAGAAGCCATGGTTaGCCGCTCCTCCTGGTGACAAGTATGGAGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: KGKTTKSQRSHG*PLLLVTSMEPS Trigger: AGATGGCTCCATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | CAGTTTCTCCACAAAACGCACAATACTGTTATCACGTaGGCCACTGCCACTAACACCCTTGCTGCCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QFLHKTHNTVIT*ATATNTLAASS Trigger: GCTGCTGGCAGCAAGGGTGTTAGTGGCAGTGGCTCACGTGATAACAGTATTGTGCGTTTTGTGGAGAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | ATCAACAAAGCCAACCACCAGGCCTTCCAGCCCTGCTaGTCGAGAAGGGAAAGACTACAAAGTCCCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: INKANHQAFQPC*SRRERLQSPRE Trigger: TTCTCTGGGACTTTGTAGTCTTTCCCTTCTCGATCAGCAGGGCTGGAAGGCCTGGTGGTTGGCTTTGTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | AGTCTCCAGAGACCAGAGAGAGGGCCTCTCAACCTATaGCACCACATCTACTCTCTAGGACATGTCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLQRPERGPLNL*HHIYSLGHVRD Trigger: ATCCCTGACATGTCCTAGAGAGTAGATGTGGTGTCATAGGTTGAGAGGCCCTCTCTCTGGTCTCTGGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR GCA 72 bp | TGCAGAAACACACTGGAAAGAATCTTGGAGGCTTTCTaGTTGGCCAGCAGTGGGGGCTTTCTCAGGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CRNTLERILEAF*LASSGGFLRRD Trigger: ATCTCTCCTGAGAAAGCCCCCACTGCTGGCCAAGCAGAAAGCCTCCAAGATTCTTTCCAGTGTGTTTCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | CCAAAGAGGTCTCAAAGAAAATTTCCCTGTGGGATCTaGTGGGCTAGCAATGGGCACAGCATGAGCAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PKRSQRKFPCGI*WASNGHSMSKG Trigger: CCCTTTGCTCATGCTGTGCCCATTGCTAGCCCACCAGATCCCACAGGGAAATTTTCTTTGAGACCTCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | AAGAGGTCTCAAAGAAAATTTCCCTGTGGGATCTGGTaGGCTAGCAATGGGCACAGCATGAGCAAAGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KRSQRKFPCGIW*ASNGHSMSKGS Trigger: AGACCCTTTGCTCATGCTGTGCCCATTGCTAGCCCACCAGATCCCACAGGGAAATTTTCTTTGAGACCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTATGACACCACATCTACTCTCTAGGACATGTCAGGGATCAAGCAGGAAGATGCGGTTTGTCGTTGTTTaGGACAAGCGGAGGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PMTPHLLSRTCQGSSRKMRFVVV*DKRRLL Trigger: CAACAACCTCCGCTTGTCCAAAACAACGACAAACCG...CATCTTCCTGCTTGATCCCTGACATGTCCTAGAGAGTAGATGTGGTGTCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR TCA 72 bp | TACTCTCTAGGACATGTCAGGGATCAAGCAGGAAGATaGCCCAAAGAGGTCTCAAAGAAAATTTCCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: YSLGHVRDQAGR*PKEVSKKISLW Trigger: CCACAGGGAAATTTTCTTTGAGACCTCTTTGGGTCATCTTCCTGCTTGATCCCTGACATGTCCTAGAGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | AGAAGAAAAATCCGGGAACCAATTTCCCCCTCTCAATaGTGGGCAGAGAGGTTACACAAACTAGAAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RRKIREPISPSQ*WAERLHKLEAR Trigger: TCTTGCTTCTAGTTTGTGTAACCTCTCTGCCCACCATTGAGAGGGGGAAATTGGTTCCCGGATTTTTCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CCA 72 bp | GAGACTGAGTTCTCTGAGACAGAGGCCTTCTCCCAATaGTCAGTATCCTTTAGAACAGAAGGTAGTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ETEFSETEAFSQ*SVSFRTEGSLF Trigger: AAACAAACTACCTTCTGTTCTAAAGGATACTGACCATTGGGAGAAGGCCTCTGTCTCAGAGAACTCAGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCACCAACCCACACAACGCTGGCCTGTCACCCCTGCAAGGTGGCTGACCTCATCCAGGGTCCCCCTTaGGGTCACCGACAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GAPTHTTLACHPCKVADLIQGPP*GHRQCL Trigger: CAGGCACTGTCGGTGACCTCAAGGGGGACCCTGGAT...GAGGTCAGCCACCTTGCAGGGGTGACAGGCCAGCGTTGTGTGGGTTGGTGCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 72 bp | GGGTGGCTGCCGAGGGAGACAGCCGGGCGCTCAGTTTaGCAGAGGGCTGGAGCCTTTCCGTTTCGGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWLPRETAGRSV*QRAGAFPFRFV Trigger: GACAAACCGAAACGGAAAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 72 bp | GGAGGAGACCCGGACATGCGACAAAGCCTATCACCCTaGGCCTGCACCACCAGGCGAGGGCCTCCCTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGDPDMRQSLSP*ACTTRRGPPYV Trigger: GACATAGGGAGGCCCTCGCCTGGTGGTGCAGGCCAAGGGTGATAGGCTTTGTCGCATGTCCGGGTCTCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAAGTCACCGTCGACACAAGGTGGGCAGCAGATGCTGGGAAGAGGGGGTCCGACAGTGCCTGGATaGACTCGGAGAACTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: APKSPSTQGGQQMLGRGGPTVPG*TRRTQS Trigger: GGATTGAGTTCTCCGAGTTCATCCAGGCACTGTCGG...ACCCCCTCTTCCCAGCATCTGCTGCCCACCTTGTGTCGACGGTGACTTGGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCATCTCTCTGGCTCTGGACCCAGTCCTGAGGACCAACAGGGCCTGGTGTTGGAGGGATCAGCCTTaGAGCCTTCCTGGAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAISLALDPVLRTNRAWCWRDQP*SLPGTP Trigger: AGGAGTTCCAGGAAGGCTCCAAGGCTGATCCCTCCA...ACACCAGGCCCTGTTGGTCCTCAGGACTGGGTCCAGAGCCAGAGAGATGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGCACAGGGGCGGTGTCAGGCTGCGGTGGCCTCATGGCACAGAAAGAGGCTAAGCCCTTGTACCACTaGTGTACTTCTTTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGTGAVSGCGGLMAQKEAKPLYH*CTSFSV Trigger: CACTGAGAAAGAAGTACAGCAGTGGTACAAGGGCTT...AGCCTCTTTCTGTGCCATGAGGCCACCGCAGCCTGACACCGCCCCTGTGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCAGCCCTGCTGATCGAGAAGGGAAAGACTACAAAGTCCCAGAGAAGCCATCCAGCGGCATCCAGCTaGCCGCTGGGGCAGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPALLIEKGKTTKSQRSHPAASS*PLGQSL Trigger: TAAGGACTGCCCCAGCGGGCAGCTGGATGCCGCTGG...ATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTTCTCGATCAGCAGGGCTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGGGGTGCCATCAGACACAGTCAGCCTCTGAGGCAGACCACACACTCCGGCCAAACGTGGCGAACTTaGTGGGGTCTCCAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGGAIRHSQPLRQTTHSGQTWRT*WGLQMG Trigger: TCCCATTTGGAGACCCCACCAAGTTCGCCACGTTTG...GCCGGAGTGTGTGGTCTGCCTCAGAGGCTGACTGTGTCTGATGGCACCCCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 72 bp | ATACTGTTATCACGTGAGCCACTGCCACTAACACCCTaGCTGCCAGCAGCCTCACTGGCCCTGGTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: ILLSREPLPLTP*LPAASLALVTT Trigger: GGTGGTGACCAGGGCCAGTGAGGCTGCTGGCAGCAAGGGTGTTAGTGGCAGTGGCTCACGTGATAACAGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR GCA 90 bp | GTAAATGGCGTCCACTATGTCGAGCATCTCGTTCCTGGTGATGTAGCCATCGTTCCAGCGGCATCCAGCTaGCCGCTGGGGCAGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VNGVHYVEHLVPGDVAIVPAASS*PLGQSL Trigger: TAAGGACTGCCCCAGCGGGCAGCTGGATGCCGCTGG...AACGATGGCTACATCACCAGGAACGAGATGCTCGACATAGTGGACGCCATTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGCCGAGGGAGACAGCCGGGCGCTCAGTTTTGCAGAGGGCTGGAGCCTTGTACTTCTTTCTCAGTaGAGTAGGTTTTTCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VAAEGDSRALSFAEGWSLVLLSQ*SRFFWS Trigger: TGACCAGAAAAACCTACTTCACTGAGAAAGAAGTAC...AAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGGGCAAAGCTTCCCACTGTGCCCTTATGCCAACTACCTTGCCAGTCCCGTCACCGACAGTGCCTaGATGAACTCGGAGAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGQSFPLCPYANYLASPVTDSA*MNSENS Trigger: TGAGTTCTCCGAGTTCATCCAGGCACTGTCGGTGAC...GGGACTGGCAAGGTAGTTGGCATAAGGGCACAGTGGGAAGCTTTGCCCTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGGGCAAAGCTTCCCACTGTGCCCTTATGCCAACTACCTTGCCAGTCCCTGTGTTCTCTTCTTCTaGGAGCTCCACGGTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGGQSFPLCPYANYLASPCVLFF*ELHGVP Trigger: GGGAACACCGTGGAGCTCCCAGAAGAAGAGAACACA...GGGACTGGCAAGGTAGTTGGCATAAGGGCACAGTGGGAAGCTTTGCCCTCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | GACTACAAAGTCCCAGAGAAGCCATGGTTGCCCGCTCCTCCTGGTGACAAGTATACAGCGCCTGCACAATaGAGGGATCAGCCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DYKVPEKPWLPAPPGDKYTAPAQ*RDQPWS Trigger: GCTCCAAGGCTGATCCCTCCATTGTGCAGGCGCTGT...ATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 72 bp | CGTGACTCCTCCAACGTCCTGAAGGAATCTGGAGACTaGGTCCGGGAATGCAGAGGTAAAGGGTGTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDSSNVLKESGD*VRECRGKGCWV Trigger: CACCCAACACCCTTTACCTCTGCATTCCCGGACCAAGTCTCCAGATTCCTTCAGGACGTTGGAGGAGTCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGTTCTCTTCTTCTGGGAGCTCCACGGTGTTCCCCACCATCTGGTAAATGGCCGACAGTGCCTGGATaGACTCGGAGAACTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VCSLLLGAPRCSPPSGKWPTVPG*TRRTQS Trigger: GGATTGAGTTCTCCGAGTTCATCCAGGCACTGTCGG...CCATTTACCAGATGGTGGGGAACACCGTGGAGCTCCCAGAAGAAGAGAACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
||
| 3UTR CAA 72 bp | CCGTTTCGGTTTGTCGTTGTTTTGGACAAGCGGAGGTaGTTGACGATTGGAACCAGTGGCTTCAGGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFRFVVVLDKRR*LTIGTSGFRRQ Trigger: CTGCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACAAACCGAAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 72 bp | GAAGGGAAAGACTACAAAGTCCCAGAGAAGCCATGGTaGCCCGCTCCTCCTGGTGACAAGTATGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EGKDYKVPEKPW*PAPPGDKYGAI Trigger: GATGGCTCCATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGCTCCACGGTGTTCCCCACCATCTGGTAAATGGCGTCCACTATGTCGAGGGTGGGGTCTCCAAATaGGAAGAACTGCTTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WELHGVPHHLVNGVHYVEGGVSK*EELLVD Trigger: ATCTACAAGCAGTTCTTCCCATTTGGAGACCCCACC...CTCGACATAGTGGACGCCATTTACCAGATGGTGGGGAACACCGTGGAGCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTCTTCTTCTGGGAGCTCCACGGTGTTCCCCACCATCTGGTAAATGGCGTCAAACGTGGCGAACTTaGTGGGGTCTCCAAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSLLLGAPRCSPPSGKWRQTWRT*WGLQMG Trigger: TCCCATTTGGAGACCCCACCAAGTTCGCCACGTTTG...ACGCCATTTACCAGATGGTGGGGAACACCGTGGAGCTCCCAGAAGAAGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTCAGCTAACTGCTGGTGAAAGAGAGACAGACATCAGTCAGCACGCGTCCCCACCATCTGGTAAATaGCGTCCACTATGTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPQLTAGERETDISQHASPPSGK*RPLCRA Trigger: TGCTCGACATAGTGGACGCCATTTACCAGATGGTGG...GGACGCGTGCTGACTGATGTCTGTCTCTCTTTCACCAGCAGTTAGCTGAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 72 bp | TTTCGGTTTGTCGTTGTTTTGGACAAGCGGAGGTTGTaGACGATTGGAACCAGTGGCTTCAGGCGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRFVVVLDKRRL*TIGTSGFRRQV Trigger: CACCTGCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACAAACCGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCAGCTAACTGCTGGTGAAAGAGAGACAGACATCAGTCAGCACGCGTCCCCAAGTCATAAAGCTTaGAGGCCCATCGCAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPQLTAGERETDISQHASPSHKA*RPIAAF Trigger: AAAAGCTGCGATGGGCCTTCAAGCTTTATGACTTGG...GGACGCGTGCTGACTGATGTCTGTCTCTCTTTCACCAGCAGTTAGCTGAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| 3UTR CAA 72 bp | AGGGCTGGAGCCTTTCCGTTTCGGTTTGTCGTTGTTTaGGACAAGCGGAGGTTGTTGACGATTGGAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGAFPFRFVVV*DKRRLLTIGTS Trigger: ACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAAACAACGACAAACCGAAACGGAAAGGCTCCAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCAGCCCTGCTGATCGAGAAGGGAAAGACTACAAAGTCCCAGAGAAGCCATGGTGGGGTCTCCAAATaGGAAGAACTGCTTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPALLIEKGKTTKSQRSHGGVSK*EELLVD Trigger: ATCTACAAGCAGTTCTTCCCATTTGGAGACCCCACC...ATGGCTTCTCTGGGACTTTGTAGTCTTTCCCTTCTCGATCAGCAGGGCTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGTGTTCTCTTCTTCTGGGAGCTCCACGGTGTTCCCCACCATCTGGTAAATTACAGTAGGTTTTTCTaGTCAGCTCCTCCACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: WCVLFFWELHGVPHHLVNYSRFF*SAPPQL Trigger: AAGTTGTGGAGGAGCTGACCAGAAAAACCTACTGTA...ATTTACCAGATGGTGGGGAACACCGTGGAGCTCCCAGAAGAAGAGAACACACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
||
| 3UTR CAA 72 bp | CAGCTGCTCATCCACAGGTCATTAGCAAGGAAGATTTaGGTCTCCCAGAAGTATGCTGGAGATTACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLIHRSLARKI*VSQKYAGDYRR Trigger: TCTCCTGTAATCTCCAGCATACTTCTGGGAGACCAAAATCTTCCTTGCTAATGACCTGTGGATGAGCAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CCA 90 bp | GACATGTCAGGGATCAAGCAGGAAGATGACCCAAAGAGGTCTCAAAGAAAATTTCATTCTTGTCCATCATaGCAAAGATCCGGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: DMSGIKQEDDPKRSQRKFHSCPS*QRSGPP Trigger: GGGTGGACCGGATCTTTGCCATGATGGACAAGAATG...AAATTTTCTTTGAGACCTCTTTGGGTCATCTTCCTGCTTGATCCCTGACATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGCCGAGGGAGACAGCCGGGCGCTCAGTTTTGCAGAGGGCTGGAGCCTTACAAACGTGGCGAACTaGGTGGGGTCTCCAAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAAEGDSRALSFAEGWSLTNVAN*VGSPNG Trigger: CCCATTTGGAGACCCCACCAAGTTCGCCACGTTTGT...AAGGCTCCAGCCCTCTGCAAAACTGAGCGCCCGGCTGTCTCCCTCGGCAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CAA 90 bp | GACTACAAAGTCCCAGAGAAGCCATGGTTGCCCGCTCCTCCTGGTGACAAGTATCATCCAGGGTCCCCCTaGAGGTCACCGACAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DYKVPEKPWLPAPPGDKYHPGSP*RSPTVP Trigger: AGGCACTGTCGGTGACCTCAAGGGGGACCCTGGATG...ATACTTGTCACCAGGAGGAGCGGGCAACCATGGCTTCTCTGGGACTTTGTAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS CCA 90 bp | CGCAGCTTTTCATCCAGGGTCCCCCTTGAGGTCACCGACAGTGCCTaGATGAACTCGGAGAACTCAATCCTGCCATCCTTGTTCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RSFSSRVPLEVTDSA*MNSENSILPSLFSS Trigger: CGACGAGAACAAGGATGGCAGGATTGAGTTCTCCGAGTTCATCCAGGCACTGTCGGTGACCTCAAGGGGGACCCTGGATGAAAAGCTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCCATCTCTCTGGCTCTGGACCCAGTCCTGAGGACCAACAGGGCCTGGTGTTTCCCATCAGCATTCTaGTCCATCATGGCAAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: GAISLALDPVLRTNRAWCFPSAF*SIMAKI Trigger: GATCTTTGCCATGATGGACAAGAATGCTGATGGGAA...ACACCAGGCCCTGTTGGTCCTCAGGACTGGGTCCAGAGCCAGAGAGATGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS TCA 90 bp | GCTTTTCATCCAGGGTCCCCCTTGAGGTCACCGACAGTGCCTGGATaGACTCGGAGAACTCAATCCTGCCATCCTTGTTCTCGTCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AFHPGSPLRSPTVPG*TRRTQSCHPCSRRR Trigger: TCTTCGACGAGAACAAGGATGGCAGGATTGAGTTCTCCGAGTTCATCCAGGCACTGTCGGTGACCTCAAGGGGGACCCTGGATGAAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGTTCTCTTCTTCTGGGAGCTCCACGGTGTTCCCCACCATCTGGTAAATGGACAAACGTGGCGAACTaGGTGGGGTCTCCAAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: VCSLLLGAPRCSPPSGKWTNVAN*VGSPNG Trigger: CCCATTTGGAGACCCCACCAAGTTCGCCACGTTTGT...CCATTTACCAGATGGTGGGGAACACCGTGGAGCTCCCAGAAGAAGAGAACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
||
| CDS TCA 90 bp | GCCTGCACAATGGAGGGATCAGCCTTGGAGCCTTCCTGGAACTCCTaGAGAGTCAGCTTCCCATCAGCATTCTTGTCCATCATGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ACTMEGSALEPSWNS*RVSFPSAFLSIMAK Trigger: CTTTGCCATGATGGACAAGAATGCTGATGGGAAGCTGACTCTTCAGGAGTTCCAGGAAGGCTCCAAGGCTGATCCCTCCATTGTGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS CCA 90 bp | AGCATTCTTGTCCATCATGGCAAAGATCCGGTCCACCCTCTTCTCTaGTGTGTTCTCTTCTTCTGGGAGCTCCACGGTGTTCCCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SILVHHGKDPVHPLL*CVLFFWELHGVPHH Trigger: ATGGTGGGGAACACCGTGGAGCTCCCAGAAGAAGAGAACACACCAGAGAAGAGGGTGGACCGGATCTTTGCCATGATGGACAAGAATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
||
| CDS CCA 90 bp | GAAGACGTTGAAAACAAACGTGGCGAACTTGGTGGGGTCTCCAAATaGGAAGAACTGCTTGTAGATCTTCTGGAAGCCAGCGGCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: EDVENKRGELGGVSK*EELLVDLLEASGIQ Trigger: CTGGATGCCGCTGGCTTCCAGAAGATCTACAAGCAGTTCTTCCCATTTGGAGACCCCACCAAGTTCGCCACGTTTGTTTTCAACGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000199.8 ENSMUST00000150670.2 |
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| CDS TCA 90 bp | ACTCGGAGAACTCAATCCTGCCATCCTTGTTCTCGTCGAAGACGTTaGAAACAAACGTGGCGAACTTGGTGGGGTCTCCAAATGGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: TRRTQSCHPCSRRRR*KQTWRTWWGLQMGR Trigger: TCTTCCCATTTGGAGACCCCACCAAGTTCGCCACGTTTGTTTTCAACGTCTTCGACGAGAACAAGGATGGCAGGATTGAGTTCTCCGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000199.8 ENSMUST00000150670.2 |
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| CDS-3UTR CAA 90 bp | TTCTGGGAGCTCCACGGTGTTCCCCACCATCTGGTAAATGGCGTCCACTATGTCTCCTTAATGAAGCCCTaGTACAGTAGGTTTTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FWELHGVPHHLVNGVHYVSLMKP*YSRFFW Trigger: CCAGAAAAACCTACTGTACAAGGGCTTCATTAAGGA...GACATAGTGGACGCCATTTACCAGATGGTGGGGAACACCGTGGAGCTCCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150670.2 |
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| CDS-3UTR CAA 90 bp | CCTATGACACCACATCTACTCTCTAGGACATGTCAGGGATCAAGCAGGAAGATGTCCTTAATGAAGCCCTaGTACCACTGCTGTACTTCT | + |
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Preference number: 5 (lower is better) Translates to: PMTPHLLSRTCQGSSRKMSLMKP*YHCCTS Trigger: AGAAGTACAGCAGTGGTACAAGGGCTTCATTAAGGA...CATCTTCCTGCTTGATCCCTGACATGTCCTAGAGAGTAGATGTGGTGTCATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| CDS CCA 72 bp | AGAGGGACAGCGCCTGCACAATGGAGGGATCAGCCTTaGAGCCTTCCTGGAACTCCTGAAGAGTCAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RGTAPAQWRDQP*SLPGTPEESAS Trigger: GGAAGCTGACTCTTCAGGAGTTCCAGGAAGGCTCCAAGGCTGATCCCTCCATTGTGCAGGCGCTGTCCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| CDS TCA 72 bp | CCAGGGTCCCCCTTGAGGTCACCGACAGTGCCTGGATaGACTCGGAGAACTCAATCCTGCCATCCTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: PGSPLRSPTVPG*TRRTQSCHPCS Trigger: AGAACAAGGATGGCAGGATTGAGTTCTCCGAGTTCATCCAGGCACTGTCGGTGACCTCAAGGGGGACCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| CDS CCA 72 bp | TCATCCAGGGTCCCCCTTGAGGTCACCGACAGTGCCTaGATGAACTCGGAGAACTCAATCCTGCCATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSRVPLEVTDSA*MNSENSILPSL Trigger: CAAGGATGGCAGGATTGAGTTCTCCGAGTTCATCCAGGCACTGTCGGTGACCTCAAGGGGGACCCTGGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| CDS TCA 72 bp | ATGGAGGGATCAGCCTTGGAGCCTTCCTGGAACTCCTaGAGAGTCAGCTTCCCATCAGCATTCTTGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: MEGSALEPSWNS*RVSFPSAFLSI Trigger: GATGGACAAGAATGCTGATGGGAAGCTGACTCTTCAGGAGTTCCAGGAAGGCTCCAAGGCTGATCCCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000199.8 |
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| CDS CAA 90 bp | AACTCGGAGAACTCAATCCTGCCATCCTTGTTCTCGTCGAAGACGTaGAAAACAAACGTGGCGAACTTGGTGGGGTCTCCAAATGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: NSENSILPSLFSSKT*KTNVANLVGSPNGK Trigger: CTTCCCATTTGGAGACCCCACCAAGTTCGCCACGTTTGTTTTCAACGTCTTCGACGAGAACAAGGATGGCAGGATTGAGTTCTCCGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000199.8 ENSMUST00000150670.2 |
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| CDS TCA 72 bp | ACTCAATCCTGCCATCCTTGTTCTCGTCGAAGACGTTaGAAACAAACGTGGCGAACTTGGTGGGGTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: TQSCHPCSRRRR*KQTWRTWWGLQ Trigger: TTGGAGACCCCACCAAGTTCGCCACGTTTGTTTTCAACGTCTTCGACGAGAACAAGGATGGCAGGATTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000199.8 ENSMUST00000150670.2 |
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| CDS CAA 72 bp | AACTCAATCCTGCCATCCTTGTTCTCGTCGAAGACGTaGAAAACAAACGTGGCGAACTTGGTGGGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: NSILPSLFSSKT*KTNVANLVGSP Trigger: TGGAGACCCCACCAAGTTCGCCACGTTTGTTTTCAACGTCTTCGACGAGAACAAGGATGGCAGGATTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000199.8 ENSMUST00000150670.2 |
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