Pregenerated sensors for NCOA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056234Ensembl transcript IDs: ENSMUST00000111994.10, ENSMUST00000163336.8, ENSMUST00000168334.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGCTCGTTGGCTTTACACACTTCCTCTACTTTCCATGTGTCCTaGTGGTTCTGGGCAAGCCAGCCGTCGCTGATTGTTGCGCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: QGSLALHTSSTFHVS*WFWASQPSLIVAPG Trigger: CCCCGGCGCAACAATCAGCGACGGCTGGCTTGCCCAGAACCATCAGGACACATGGAAAGTAGAGGAAGTGTGTAAAGCCAACGAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR CCA 90 bp | GCCCTAAGAGTGGTCTTAAAACAAAGTCCCTTTCAAAGAGCTCACTaGATACTGGAAAGAAATAAAGGCAACAACTATAATAGCTTAATT | + |
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Preference number: 1 (lower is better) Translates to: ALRVVLKQSPFQRAH*ILERNKGNNYNSLI Trigger: AATTAAGCTATTATAGTTGTTGCCTTTATTTCTTTCCAGTATCCAGTGAGCTCTTTGAAAGGGACTTTGTTTTAAGACCACTCTTAGGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR CAA 90 bp | GGGTTCCTGAGGAGTCACCAACCAATCAGACAGGTCCAGCTCGTCTaGATCAAGGAGCTCTACATCTTCAGCCTTTTCAGCTTCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GFLRSHQPIRQVQLV*IKELYIFSLFSFRR Trigger: TCTCCTGAAGCTGAAAAGGCTGAAGATGTAGAGCTCCTTGATCAAGACGAGCTGGACCTGTCTGATTGGTTGGTGACTCCTCAGGAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGCACAGCCTGGTAATCAAGATGTCACTGCACTGTACTTTAGGAGGTTCATGTGCCACTGGATGCTaGCTTCTGCTCTGGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: VEHSLVIKMSLHCTLGGSCATGC*LLLWHL Trigger: CAGGTGCCAGAGCAGAAGTCAGCATCCAGTGGCACA...TGAACCTCCTAAAGTACAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | GATGACCAGTGGTTCGGGTACTGCATTCCTAACACTTTTTACCTTTCTGCTTTATGCCCCAGGCATCGCTaGAGAAACTGCAGGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: DDQWFGYCIPNTFYLSALCPRHR*RNCRLW Trigger: CCAGAGCCTGCAGTTTCTTCAGCGATGCCTGGGGCA...TAAAGCAGAAAGGTAAAAAGTGTTAGGAATGCAGTACCCGAACCACTGGTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGGGACGCTGGTTTCCCAGCTaGCATCCACAGGCTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TKLHCRVHNMVNTKQPLGRWFPS*HPQASP Trigger: TGGAGAAGCCTGTGGATGGCAGCTGGGAAACCAGCG...TCCCAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCATTTCTGGAAGGGCAGAGCCACAGTGTCAGGGACTCTCTGTGTTTCTCAGGAATGCACAATGGTTTaGCAAATCGCAGTCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: AHFWKGRATVSGTLCVSQECTMV*QIAVTQ Trigger: CTGAGTGACTGCGATTTGCCAAACCATTGTGCATTC...CTGAGAAACACAGAGAGTCCCTGACACTGTGGCTCTGCCCTTCCAGAAATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCACCAACCAATCAGACAGGTCCAGCTCGTCTTGATCAAGGAGCTCTACATCTCAGCTCAAGGATGTaGAATAATCTGCAGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: ESPTNQTGPARLDQGALHLSSRM*NNLQES Trigger: GCTTTCCTGCAGATTATTGCACATCCTTGAGCTGAG...ATGTAGAGCTCCTTGATCAAGACGAGCTGGACCTGTCTGATTGGTTGGTGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGCACAGCCTGGTAATCAAGATGTCACTGCACTGTACTTTAGGAGGTTCACTCAGCTCAAGGATGTaGAATAATCTGCAGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VEHSLVIKMSLHCTLGGSLSSRM*NNLQES Trigger: GCTTTCCTGCAGATTATTGCACATCCTTGAGCTGAG...TGAACCTCCTAAAGTACAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGGGAGAATGCACAATGGTTTaGCAAATCGCAGTCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TKLHCRVHNMVNTKQPLGECTMV*QIAVTQ Trigger: CTGAGTGACTGCGATTTGCCAAACCATTGTGCATTC...TCCCAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGGGAGAGGAACTAAGCTaGCTAGTCAGGCTTGGAATG | + |
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Preference number: 2 (lower is better) Translates to: TFYLSALGFTLVKAEVCRGEELS*LVRLGM Trigger: CATTCCAAGCCTGACTAGTCAGCTTAGTTCCTCTCC...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATCACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTAAGAAATCCTTAGGATaGCCAGTGGTTCGGGTACTG | + |
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Preference number: 2 (lower is better) Translates to: IITKLHCRVHNMVNTKQPKKSLG*PVVRVL Trigger: CAGTACCCGAACCACTGGTCATCCTAAGGATTTCTT...AGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATCACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTGCTCTGGCAGAAGTCTaGCTATTCTCTGAAGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: IITKLHCRVHNMVNTKQPALAEV*LFSEVC Trigger: ACAGACTTCAGAGAATAGTCAGACTTCTGCCAGAGC...AGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGAGGTCCAGCTCGTCTTaGTCAAGGAGCTCTACATCT | + |
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Preference number: 2 (lower is better) Translates to: TFYLSALGFTLVKAEVCRRSSSS*SRSSTS Trigger: AGATGTAGAGCTCCTTGATCAAGACGAGCTGGACCT...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR GCA 90 bp | GATGACCAGTGGTTCGGGTACTGCATTCCTAACACTTTTTACCTTTCTGCTTTACTCAGCTCAAGGATGTaGAATAATCTGCAGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: DDQWFGYCIPNTFYLSALLSSRM*NNLQES Trigger: GCTTTCCTGCAGATTATTGCACATCCTTGAGCTGAG...TAAAGCAGAAAGGTAAAAAGTGTTAGGAATGCAGTACCCGAACCACTGGTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGGGAGAGGAACTAAGCTaGCTAGTCAGGCTTGGAATG | + |
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Preference number: 2 (lower is better) Translates to: LRDIRKYEVLFSYDLELQGEELS*LVRLGM Trigger: CATTCCAAGCCTGACTAGTCAGCTTAGTTCCTCTCC...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGAAGAAATCCTTAGGATaGCCAGTGGTTCGGGTACTG | + |
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Preference number: 2 (lower is better) Translates to: LRDIRKYEVLFSYDLELQKKSLG*PVVRVL Trigger: CAGTACCCGAACCACTGGTCATCCTAAGGATTTCTT...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGCACAGCCTGGTAATCAAGATGTCACTGCACTGTACTTTAGGAGGTTCACACTTTTTACCTTTCTaGTTTAGGGTTCACTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: VEHSLVIKMSLHCTLGGSHFLPF*FRVHFS Trigger: ACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGTG...TGAACCTCCTAAAGTACAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGTCAGGATGCTGTGCTTaGAGTAACAGGACATTGACT | + |
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Preference number: 2 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWSGCCA*SNRTLT Trigger: AGTCAATGTCCTGTTACTTCAAGCACAGCATCCTGA...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATCACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTGGTTCTTTTCAGCTATaGTTTGGAGCTTCAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: IITKLHCRVHNMVNTKQPGSFQL*FGASVK Trigger: CTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACC...AGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | TACAAAGTTCCCTGCAACCTAAAATGTTGGAAAGGCTCCTTAAATTGTCTTTACAGATGCTCAGGGATTTaGATGGTCTTAAGGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: YKVPCNLKCWKGSLNCLYRCSGI*MVLRDP Trigger: TGGATCCCTTAAGACCATTCAAATCCCTGAGCATCT...GTAAAGACAATTTAAGGAGCCTTTCCAACATTTTAGGTTGCAGGGAACTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGGAATGCACAATGGTTTaGCAAATCGCAGTCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWECTMV*QIAVTQ Trigger: CTGAGTGACTGCGATTTGCCAAACCATTGTGCATTC...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGCAGTGGTTCGGGTACTaGATTCCTAACACTTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWQWFGY*IPNTFY Trigger: GTAAAAAGTGTTAGGAATGCAGTACCCGAACCACTG...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGATGGTAATGTCACTATaGGACCATAAAATTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ITKLHCRVHNMVNTKQPLMVMSL*DHKIFP Trigger: TGGGAAAATTTTATGGTCCCATAGTGACATTACCAT...CAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR TCA 90 bp | TACAAAGTTCCCTGCAACCTAAAATGTTGGAAAGGCTCCTTAAATTGTCTTTACGGTTCTTTTCAGCTATaGTTTGGAGCTTCAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: YKVPCNLKCWKGSLNCLYGSFQL*FGASVK Trigger: CTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACC...GTAAAGACAATTTAAGGAGCCTTTCCAACATTTTAGGTTGCAGGGAACTTTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR GCA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGAACTACAAAGTTCCCTaGAACCTAAAATGTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LRDIRKYEVLFSYDLELQNYKVP*NLKCWK Trigger: TTTCCAACATTTTAGGTTGCAGGGAACTTTGTAGTT...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CCA 90 bp | CCTACCAACTTTATAATACTCAGTGGCATCTTGAGGGACATAAGAAAATATGAGTGCAACCTAAAATGTTaGAAAGGCTCCTTAAATTGT | + |
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Preference number: 2 (lower is better) Translates to: PTNFIILSGILRDIRKYECNLKC*KGSLNC Trigger: ACAATTTAAGGAGCCTTTCCAACATTTTAGGTTGCA...CTCATATTTTCTTATGTCCCTCAAGATGCCACTGAGTATTATAAAGTTGGTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCATTTCTGGAAGGGCAGAGCCACAGTGTCAGGGACTCTCTGTGTTTCTCAGTCTAAGCCCTTCAGATaGCCCCAGGCATCGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: AHFWKGRATVSGTLCVSQSKPFR*PQASLK Trigger: CTTCAGCGATGCCTGGGGCAATCTGAAGGGCTTAGA...CTGAGAAACACAGAGAGTCCCTGACACTGTGGCTCTGCCCTTCCAGAAATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR TCA 72 bp | TGTGAAGTCTCGGTGAGACACTCCAAGGCACAGTGTTaGGCACAGCCTGGTAATCAAGATGTCACTGCACTG | + |
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Preference number: 3 (lower is better) Translates to: CEVSVRHSKAQC*AQPGNQDVTAL Trigger: CAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAACACTGTGCCTTGGAGTGTCTCACCGAGACTTCACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR TCA 72 bp | GGAGTCACCAACCAATCAGACAGGTCCAGCTCGTCTTaGTCAAGGAGCTCTACATCTTCAGCCTTTTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GVTNQSDRSSSS*SRSSTSSAFSA Trigger: AGCTGAAAAGGCTGAAGATGTAGAGCTCCTTGATCAAGACGAGCTGGACCTGTCTGATTGGTTGGTGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR TCA 72 bp | TTGAGTTCAATTCCCACAACCGTCTATAATGGGATCTaGTGCCCTCTTCTAGTGTGTGTCCAAGGCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LSSIPTTVYNGI*CPLLVCVQGSC Trigger: GCAGCTGCCTTGGACACACACTAGAAGAGGGCATCAGATCCCATTATAGACGGTTGTGGGAATTGAACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | ATCACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGAGTGGCCATGGAGCTTaGAAGCATCTCTTTGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: ITKLHCRVHNMVNTKQPLSGHGA*KHLFAS Trigger: GCTGGCAAAGAGATGCTTCAAAGCTCCATGGCCACT...CAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR TCA 72 bp | GCAGTTAAGAGCACTGACTGCTCTGCCAGAGGTTCTTaGGTTCAATTCCCACAACCGTCTATAATGGGATCT | + |
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Preference number: 3 (lower is better) Translates to: AVKSTDCSARGS*VQFPQPSIMGS Trigger: AGATCCCATTATAGACGGTTGTGGGAATTGAACTCAAGAACCTCTGGCAGAGCAGTCAGTGCTCTTAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR CCA 72 bp | CCAACATGGATGACATTAAACAACCTCAACATGGGATaGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGC | + |
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Preference number: 3 (lower is better) Translates to: PTWMTLNNLNMG*RDGSAVKSTDC Trigger: GCAGTCAGTGCTCTTAACTGCTGAGCCATCTCTCCATCCCATGTTGAGGTTGTTTAATGTCATCCATGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGAGCACAGCCTGGTAATCAAGATGTCACTGCACTGTACTTTAGGAGGTTCAATGAATCACCTCCACTaGAAGCCTCTTTCACAGACT | + |
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Preference number: 3 (lower is better) Translates to: VEHSLVIKMSLHCTLGGSMNHLH*KPLSQT Trigger: AGTCTGTGAAAGAGGCTTCAAGTGGAGGTGATTCAT...TGAACCTCCTAAAGTACAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | ATCATCACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCAGGTCCAGCTCGTCTaGATCAAGGAGCTCTACATC | + |
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Preference number: 3 (lower is better) Translates to: IITKLHCRVHNMVNTKQPQVQLV*IKELYI Trigger: GATGTAGAGCTCCTTGATCAAGACGAGCTGGACCTG...AGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGGGATCCAGCAATTTCTTGTaGATGACTGTTAAGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TKLHCRVHNMVNTKQPLGSSNFL*MTVKEP Trigger: TGGCTCCTTAACAGTCATCAACAAGAAATTGCTGGA...TCCCAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGATGAATCACCTCCACTaGAAGCCTCTTTCACAGACT | + |
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Preference number: 3 (lower is better) Translates to: TFYLSALGFTLVKAEVCRMNHLH*KPLSQT Trigger: AGTCTGTGAAAGAGGCTTCAAGTGGAGGTGATTCAT...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGATGAATCACCTCCACTaGAAGCCTCTTTCACAGACT | + |
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Preference number: 3 (lower is better) Translates to: LRDIRKYEVLFSYDLELQMNHLH*KPLSQT Trigger: AGTCTGTGAAAGAGGCTTCAAGTGGAGGTGATTCAT...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR GCA 72 bp | AAACTAAAGGGAAAAGTGATCATCACAAAACTGCACTaGAGGGTGCATAACATGGTAAATACTAAGCAACCT | + |
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Preference number: 3 (lower is better) Translates to: KLKGKVIITKLH*RVHNMVNTKQP Trigger: AGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGATGATCACTTTTCCCTTTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGCTGCAACCTAAAATGTaGGAAAGGCTCCTTAAATTG | + |
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Preference number: 3 (lower is better) Translates to: LRDIRKYEVLFSYDLELQLQPKM*ERLLKL Trigger: CAATTTAAGGAGCCTTTCCAACATTTTAGGTTGCAG...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGATACTCAGTGGCATCTaGAGGGACATAAGAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: LRDIRKYEVLFSYDLELQILSGI*RDIRKY Trigger: ATATTTTCTTATGTCCCTCAAGATGCCACTGAGTAT...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | TACAAAGTTCCCTGCAACCTAAAATGTTGGAAAGGCTCCTTAAATTGTCTTTACATACTCAGTGGCATCTaGAGGGACATAAGAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: YKVPCNLKCWKGSLNCLYILSGI*RDIRKY Trigger: ATATTTTCTTATGTCCCTCAAGATGCCACTGAGTAT...GTAAAGACAATTTAAGGAGCCTTTCCAACATTTTAGGTTGCAGGGAACTTTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
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| 3UTR-3UTR CAA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGGAAAGGCTCCTTAAATaGTCTTTACCTACCAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRDIRKYEVLFSYDLELQERLLK*SLPTNF Trigger: AAAGTTGGTAGGTAAAGACAATTTAAGGAGCCTTTC...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGTTTTCCAGCAATTTCTaGTTGATGACTGTTAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWFSSNF*LMTVKE Trigger: CTCCTTAACAGTCATCAACAAGAAATTGCTGGAAAA...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
||
| CDS-3UTR TCA 90 bp | GTTGAGCACAGCCTGGTAATCAAGATGTCACTGCACTGTACTTTAGGAGGTTCATGCCCCAGGCATCGCTaGAGAAACTGCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VEHSLVIKMSLHCTLGGSCPRHR*RNCRLW Trigger: CCAGAGCCTGCAGTTTCTTCAGCGATGCCTGGGGCA...TGAACCTCCTAAAGTACAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR GCA 90 bp | GCTCATTTCTGGAAGGGCAGAGCCACAGTGTCAGGGACTCTCTGTGTTTCTCAGCCCTCCTTGCATCACTaGACCTCAGAAGAGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AHFWKGRATVSGTLCVSQPSLHH*TSEEFL Trigger: GAGAAACTCTTCTGAGGTGCAGTGATGCAAGGAGGG...CTGAGAAACACAGAGAGTCCCTGACACTGTGGCTCTGCCCTTCCAGAAATGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
||
| 3UTR CAA 72 bp | AGGAGTCACCAACCAATCAGACAGGTCCAGCTCGTCTaGATCAAGGAGCTCTACATCTTCAGCCTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSHQPIRQVQLV*IKELYIFSLFS Trigger: GCTGAAAAGGCTGAAGATGTAGAGCTCCTTGATCAAGACGAGCTGGACCTGTCTGATTGGTTGGTGACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168334.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGATCAAGTTACGCACGTTACGGCTTTCAAAAGAATGAATCACCTCCACTCTCCAGAGGGGAACTaGCTGAGGCTTCCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVDQVTHVTAFKRMNHLHSPEGN*LRLPTF Trigger: GAAAGTGGGAAGCCTCAGCCAGTTCCCCTCTGGAGA...GTGGAGGTGATTCATTCTTTTGAAAGCCGTAACGTGCGTAACTTGATCAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR GCA 90 bp | GTTGAGCACAGCCTGGTAATCAAGATGTCACTGCACTGTACTTTAGGAGGTTCACCCTCCTTGCATCACTaGACCTCAGAAGAGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VEHSLVIKMSLHCTLGGSPSLHH*TSEEFL Trigger: GAGAAACTCTTCTGAGGTGCAGTGATGCAAGGAGGG...TGAACCTCCTAAAGTACAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| CDS-3UTR GCA 90 bp | TACGGCTTTCAAAAGAATGAATCACCTCCACTTGAAGCCTCTTTCACAGACTTACGCTGGTTTCCCAGCTaGCATCCACAGGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YGFQKNESPPLEASFTDLRWFPS*HPQASP Trigger: TGGAGAAGCCTGTGGATGGCAGCTGGGAAACCAGCG...TAAGTCTGTGAAAGAGGCTTCAAGTGGAGGTGATTCATTCTTTTGAAAGCCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | GTTGAGCACAGCCTGGTAATCAAGATGTCACTGCACTGTACTTTAGGAGGTTCAGCTCTGGCAGAAGTCTaGCTATTCTCTGAAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VEHSLVIKMSLHCTLGGSALAEV*LFSEVC Trigger: ACAGACTTCAGAGAATAGTCAGACTTCTGCCAGAGC...TGAACCTCCTAAAGTACAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTGCCCCAGGCATCGCTaGAGAAACTGCAGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRDIRKYEVLFSYDLELQCPRHR*RNCRLW Trigger: CCAGAGCCTGCAGTTTCTTCAGCGATGCCTGGGGCA...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGATCAAGTTACGCACGTTACGGCTTTCAAAAGAATGAATCACCTCCACCCTGTGGGTTGGTACTaGGTACATAAGGAGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVDQVTHVTAFKRMNHLHPVGWY*VHKEPE Trigger: TTCAGGCTCCTTATGTACCCAGTACCAACCCACAGG...GTGGAGGTGATTCATTCTTTTGAAAGCCGTAACGTGCGTAACTTGATCAACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGGGACTGTTAGCTCATTTCTaGAAGGGCAGAGCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKLHCRVHNMVNTKQPLGLLAHF*KGRATV Trigger: CACTGTGGCTCTGCCCTTCCAGAAATGAGCTAACAG...TCCCAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTGTGCCACTGGATGCTaGCTTCTGCTCTGGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRDIRKYEVLFSYDLELQCATGC*LLLWHL Trigger: CAGGTGCCAGAGCAGAAGTCAGCATCCAGTGGCACA...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTTGATCAAGTTACGCACGTTACGGCTTTCAAAAGAATGAATCACCTCCACGCTCTGGCAGAAGTCTaGCTATTCTCTGAAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVDQVTHVTAFKRMNHLHALAEV*LFSEVC Trigger: ACAGACTTCAGAGAATAGTCAGACTTCTGCCAGAGC...GTGGAGGTGATTCATTCTTTTGAAAGCCGTAACGTGCGTAACTTGATCAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR GCA 90 bp | TACAAAGTTCCCTGCAACCTAAAATGTTGGAAAGGCTCCTTAAATTGTCTTTACCGCTGGTTTCCCAGCTaGCATCCACAGGCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YKVPCNLKCWKGSLNCLYRWFPS*HPQASP Trigger: TGGAGAAGCCTGTGGATGGCAGCTGGGAAACCAGCG...GTAAAGACAATTTAAGGAGCCTTTCCAACATTTTAGGTTGCAGGGAACTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR GCA 90 bp | GATGACCAGTGGTTCGGGTACTGCATTCCTAACACTTTTTACCTTTCTGCTTTAACTCTGCAAAACTGGTaGAGGGCTCGTTGGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: DDQWFGYCIPNTFYLSALTLQNW*RARWLY Trigger: GTAAAGCCAACGAGCCCTGCACCAGTTTTGCAGAGT...TAAAGCAGAAAGGTAAAAAGTGTTAGGAATGCAGTACCCGAACCACTGGTCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR GCA 90 bp | ATCACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGACTCTGCAAAACTGGTaGAGGGCTCGTTGGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ITKLHCRVHNMVNTKQPLTLQNW*RARWLY Trigger: GTAAAGCCAACGAGCCCTGCACCAGTTTTGCAGAGT...CAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163336.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGGGAACCAGGAAGTGGCCATaGAGCTTTGAAGCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKLHCRVHNMVNTKQPLGTRKWP*SFEASL Trigger: AAGAGATGCTTCAAAGCTCCATGGCCACTTCCTGGT...TCCCAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTCTGGGAAGATGCTCAGGGATTTaGATGGTCTTAAGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKLHCRVHNMVNTKQPLGRCSGI*MVLRDP Trigger: TGGATCCCTTAAGACCATTCAAATCCCTGAGCATCT...TCCCAGAGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163336.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGCTCCAGCTCCCTCCTTaGATCACTGCACCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWLQLPP*ITAPQK Trigger: CTTCTGAGGTGCAGTGATGCAAGGAGGGAGCTGGAG...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGCTCCAGCTCCCTCCTTaGATCACTGCACCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRDIRKYEVLFSYDLELQLQLPP*ITAPQK Trigger: CTTCTGAGGTGCAGTGATGCAAGGAGGGAGCTGGAG...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGTCTCCAGAGGGGAACTaGCTGAGGCTTCCCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWSPEGN*LRLPTF Trigger: GAAAGTGGGAAGCCTCAGCCAGTTCCCCTCTGGAGA...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGGTGGCCATGGAGCTTTaGAGCATCTCTTTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWVAMEL*SISLPA Trigger: AGCTGGCAAAGAGATGCTTCAAAGCTCCATGGCCAC...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | CCTACCAACTTTATAATACTCAGTGGCATCTTGAGGGACATAAGAAAATATGAGGTGGCCATGGAGCTTTaGAGCATCTCTTTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTNFIILSGILRDIRKYEVAMEL*SISLPA Trigger: AGCTGGCAAAGAGATGCTTCAAAGCTCCATGGCCAC...CTCATATTTTCTTATGTCCCTCAAGATGCCACTGAGTATTATAAAGTTGGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGCCCTCCTTGCATCACTaGACCTCAGAAGAGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFYLSALGFTLVKAEVCRPSLHH*TSEEFL Trigger: GAGAAACTCTTCTGAGGTGCAGTGATGCAAGGAGGG...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTTGATCAAGTTACGCACGTTACGGCTTTCAAAAGAATGAATCACCTCCACAGTCTGACTATTCTCTaGAGTCTGTTTTGGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GVDQVTHVTAFKRMNHLHSLTIL*SLFWDK Trigger: CTTATCCCAAAACAGACTTCAGAGAATAGTCAGACT...GTGGAGGTGATTCATTCTTTTGAAAGCCGTAACGTGCGTAACTTGATCAACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGAGGTCCAGCTCGTCTTaGTCAAGGAGCTCTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWRSSSS*SRSSTS Trigger: AGATGTAGAGCTCCTTGATCAAGACGAGCTGGACCT...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CCA 90 bp | CCTACCAACTTTATAATACTCAGTGGCATCTTGAGGGACATAAGAAAATATGAGCTGTTAGCTCATTTCTaGAAGGGCAGAGCCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTNFIILSGILRDIRKYELLAHF*KGRATV Trigger: CACTGTGGCTCTGCCCTTCCAGAAATGAGCTAACAG...CTCATATTTTCTTATGTCCCTCAAGATGCCACTGAGTATTATAAAGTTGGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR GCA 90 bp | TACGGCTTTCAAAAGAATGAATCACCTCCACTTGAAGCCTCTTTCACAGACTTATTTGAAGCATCTCTTTaGCAGCTCTCTCCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YGFQKNESPPLEASFTDLFEASL*QLSPLY Trigger: ATACAGAGGAGAGAGCTGGCAAAGAGATGCTTCAAA...TAAGTCTGTGAAAGAGGCTTCAAGTGGAGGTGATTCATTCTTTTGAAAGCCGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGACCAGGAAGTGGCCATaGAGCTTTGAAGCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRDIRKYEVLFSYDLELQTRKWP*SFEASL Trigger: AAGAGATGCTTCAAAGCTCCATGGCCACTTCCTGGT...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR TCA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGAGATGCTCAGGGATTTaGATGGTCTTAAGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWRCSGI*MVLRDP Trigger: TGGATCCCTTAAGACCATTCAAATCCCTGAGCATCT...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CCA 90 bp | TACGGCTTTCAAAAGAATGAATCACCTCCACTTGAAGCCTCTTTCACAGACTTAGAACTGGTGCTACAATaGCTGTTACATTTTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YGFQKNESPPLEASFTDLELVLQ*LLHFEE Trigger: TTCCTCAAAATGTAACAGCCATTGTAGCACCAGTTC...TAAGTCTGTGAAAGAGGCTTCAAGTGGAGGTGATTCATTCTTTTGAAAGCCGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGGAACTGGTGCTACAATaGCTGTTACATTTTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRDIRKYEVLFSYDLELQELVLQ*LLHFEE Trigger: TTCCTCAAAATGTAACAGCCATTGTAGCACCAGTTC...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| 3UTR CAA 72 bp | TCTTTACCTACCAACTTTATAATACTCAGTGGCATCTaGAGGGACATAAGAAAATATGAGGTTCTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPTNFIILSGI*RDIRKYEVLFS Trigger: GCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAAGATGCCACTGAGTATTATAAAGTTGGTAGGTAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTTGATCAAGTTACGCACGTTACGGCTTTCAAAAGAATGAATCACCTCCACTCTAAGCCCTTCAGATaGCCCCAGGCATCGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GVDQVTHVTAFKRMNHLHSKPFR*PQASLK Trigger: CTTCAGCGATGCCTGGGGCAATCTGAAGGGCTTAGA...GTGGAGGTGATTCATTCTTTTGAAAGCCGTAACGTGCGTAACTTGATCAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CAA 90 bp | ATCATCACAAAACTGCACTGCAGGGTGCATAACATGGTAAATACTAAGCAACCTGCTCCAGCTCCCTCCTaGCATCACTGCACCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IITKLHCRVHNMVNTKQPAPAPS*HHCTSE Trigger: TTCTGAGGTGCAGTGATGCAAGGAGGGAGCTGGAGC...AGGTTGCTTAGTATTTACCATGTTATGCACCCTGCAGTGCAGTTTTGTGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGGCTCCAGCTCCCTCCTaGCATCACTGCACCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TFYLSALGFTLVKAEVCRAPAPS*HHCTSE Trigger: TTCTGAGGTGCAGTGATGCAAGGAGGGAGCTGGAGC...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| CDS-3UTR CAA 90 bp | GAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGTAAAGCTGTATGGGCTCCAGCTCCCTCCTaGCATCACTGCACCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ENMRFFSAMIWSFSKAVWAPAPS*HHCTSE Trigger: TTCTGAGGTGCAGTGATGCAAGGAGGGAGCTGGAGC...CCATACAGCTTTACTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 ENSMUST00000168334.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGTCTAAGCCCTTCAGATaGCCCCAGGCATCGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TFYLSALGFTLVKAEVCRSKPFR*PQASLK Trigger: CTTCAGCGATGCCTGGGGCAATCTGAAGGGCTTAGA...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGGCAGGAGCCATAGCCTaGGGTGCCTTAGCTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TFYLSALGFTLVKAEVCRAGAIA*GALACS Trigger: AGAACAAGCTAAGGCACCCAAGGCTATGGCTCCTGC...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGCAGGTCCAGCTCGTCTaGATCAAGGAGCTCTACATC | + |
|
Preference number: 5 (lower is better) Translates to: TFYLSALGFTLVKAEVCRQVQLV*IKELYI Trigger: GATGTAGAGCTCCTTGATCAAGACGAGCTGGACCTG...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGGGACATAAGAAAATATGAGGTTCTTTTCAGCTATGATTTGGAGCTTCAGGCAGGAGCCATAGCCTaGGGTGCCTTAGCTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRDIRKYEVLFSYDLELQAGAIA*GALACS Trigger: AGAACAAGCTAAGGCACCCAAGGCTATGGCTCCTGC...CTGAAGCTCCAAATCATAGCTGAAAAGAACCTCATATTTTCTTATGTCCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTTACCTTTCTGCTTTAGGGTTCACTTTAGTTAAAGCCGAGGTTTGTAGGAGTGGCCATGGAGCTTaGAAGCATCTCTTTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFYLSALGFTLVKAEVCRSGHGA*KHLFAS Trigger: GCTGGCAAAGAGATGCTTCAAAGCTCCATGGCCACT...CCTACAAACCTCGGCTTTAACTAAAGTGAACCCTAAAGCAGAAAGGTAAAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTTGATCAAGTTACGCACGTTACGGCTTTCAAAAGAATGAATCACCTCCACTCCAGCAATTTCTTGTaGATGACTGTTAAGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GVDQVTHVTAFKRMNHLHSSNFL*MTVKEP Trigger: TGGCTCCTTAACAGTCATCAACAAGAAATTGCTGGA...GTGGAGGTGATTCATTCTTTTGAAAGCCGTAACGTGCGTAACTTGATCAACTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
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| CDS-3UTR CAA 90 bp | CCTACCAACTTTATAATACTCAGTGGCATCTTGAGGGACATAAGAAAATATGAGCAGGTCCAGCTCGTCTaGATCAAGGAGCTCTACATC | + |
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Preference number: 5 (lower is better) Translates to: PTNFIILSGILRDIRKYEQVQLV*IKELYI Trigger: GATGTAGAGCTCCTTGATCAAGACGAGCTGGACCTG...CTCATATTTTCTTATGTCCCTCAAGATGCCACTGAGTATTATAAAGTTGGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
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| CDS-3UTR CAA 90 bp | CCTACCAACTTTATAATACTCAGTGGCATCTTGAGGGACATAAGAAAATATGAGAGTGGCCATGGAGCTTaGAAGCATCTCTTTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PTNFIILSGILRDIRKYESGHGA*KHLFAS Trigger: GCTGGCAAAGAGATGCTTCAAAGCTCCATGGCCACT...CTCATATTTTCTTATGTCCCTCAAGATGCCACTGAGTATTATAAAGTTGGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
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| CDS-3UTR CAA 90 bp | GATGACCAGTGGTTCGGGTACTGCATTCCTAACACTTTTTACCTTTCTGCTTTATCCAGCAATTTCTTGTaGATGACTGTTAAGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: DDQWFGYCIPNTFYLSALSSNFL*MTVKEP Trigger: TGGCTCCTTAACAGTCATCAACAAGAAATTGCTGGA...TAAAGCAGAAAGGTAAAAAGTGTTAGGAATGCAGTACCCGAACCACTGGTCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
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| CDS-3UTR CAA 90 bp | GTTGAGCACAGCCTGGTAATCAAGATGTCACTGCACTGTACTTTAGGAGGTTCATTTTCCAGCAATTTCTaGTTGATGACTGTTAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: VEHSLVIKMSLHCTLGGSFSSNF*LMTVKE Trigger: CTCCTTAACAGTCATCAACAAGAAATTGCTGGAAAA...TGAACCTCCTAAAGTACAGTGCAGTGACATCTTGATTACCAGGCTGTGCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111994.10 ENSMUST00000163336.8 |
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