Pregenerated sensors for NCMAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043924Ensembl transcript IDs: ENSMUST00000064481.15, ENSMUST00000105857.8, ENSMUST00000105858.8, ENSMUST00000105859.8, ENSMUST00000105860.9, ENSMUST00000123632.2, ENSMUST00000154518.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACAGGTGAGGGTGGCTTCAAGCTGCAGGGGCTGTTTGAAGGGTaGCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: STGEGGFKLQGLFEG*LSLPNQKELGEAAS Trigger: GCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAACAGCCCCTGCAGCTTGAAGCCACCCTCACCTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR CCA 90 bp | TTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGTaGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAGAGCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: FSSGNRRNVLRALVE*QQGRGHSWGGQSTG Trigger: ACCTGTGCTCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR GCA 90 bp | ACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTaGTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTC | + |
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Preference number: 1 (lower is better) Translates to: TCEATTRLTPVSPAQ*FSSGNRRNVLRALV Trigger: GACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGGCCAGAGCACAGGTaGGGGTGGCTTCAAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SRRTCEATTRLTPVSPAQWPEHR*GWLQAA Trigger: TGCAGCTTGAAGCCACCCTCACCTGTGCTCTGGCCA...CTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAGAGCCCAGAAAGAACTTGGTaGAGCTGCCAGCAGAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RALVEWQQGRGHSWGGQSPERTW*SCQQSG Trigger: TCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGG...GCTCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAGAGCGGGCTGTTTGAAGGGTaGCTCAGTTTACCCAACCAG | + |
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Preference number: 2 (lower is better) Translates to: RALVEWQQGRGHSWGGQSGLFEG*LSLPNQ Trigger: CTGGTTGGGTAAACTGAGGCACCCTTCAAACAGCCC...GCTCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCAGAGCACAGGTGAGGGTGGCTTCAAGCTGCAGGGGCTGTTTGAAGGGTCCAGAAAGAACTTGGTaGAGCTGCCAGCAGAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VARAQVRVASSCRGCLKGPERTW*SCQQSG Trigger: TCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGG...ACCCTTCAAACAGCCCCTGCAGCTTGAAGCCACCCTCACCTGTGCTCTGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR CAA 90 bp | GCTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTaGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: AQCFSSGNRRNVLRA*VEWQQGRGHSWGGQ Trigger: CTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR TCA 90 bp | GCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTCCAGAAAGAACTTGGTaGAGCTGCCAGCAGAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: AVALVRRQPDSHQFPQLSPERTW*SCQQSG Trigger: TCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGG...ACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAGAGTCATCAAAGCTCTTTaGAGAGAGGCAGGAATGGCG | + |
|
Preference number: 2 (lower is better) Translates to: SELWSSGSRDVDIAGVARVIKAL*REAGMA Trigger: CGCCATTCCTGCCTCTCTGCAAAGAGCTTTGATGAC...TCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR TCA 90 bp | ACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGATGGCCAGAGCACAGGTaGGGGTGGCTTCAAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TRLTPVSPAQCFSSGNRRWPEHR*GWLQAA Trigger: TGCAGCTTGAAGCCACCCTCACCTGTGCTCTGGCCA...TCTTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR TCA 90 bp | CAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGCTGCAGGGGCTGTTTaGAGGGTGCCTCAGTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: QPDSHQFPQLSASRQVTEAAGAV*RVPQFT Trigger: GGTAAACTGAGGCACCCTTCAAACAGCCCCTGCAGC...TTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTTTCCCTGCATCTGGCTATGGGATTGAGGAAGCTGTGGACATGCCCTTATGGCCAGAGCACAGGTaGGGGTGGCTTCAAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VSFPASGYGIEEAVDMPLWPEHR*GWLQAA Trigger: TGCAGCTTGAAGCCACCCTCACCTGTGCTCTGGCCA...TAAGGGCATGTCCACAGCTTCCTCAATCCCATAGCCAGATGCAGGGAAACTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | CGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAAGGGTGGCTTCAAGCTaGAGGGGCTGTTTGAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: RQPDSHQFPQLSASRQVTRVASS*RGCLKG Trigger: ACCCTTCAAACAGCCCCTGCAGCTTGAAGCCACCCT...TGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | CAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAAGGGTGGCTTCAAGCTaGAGGGGCTGTTTGAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: QPDSHQFPQLSASRQVTERVASS*RGCLKG Trigger: ACCCTTCAAACAGCCCCTGCAGCTTGAAGCCACCCT...TTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | ACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAAGGGTGGCTTCAAGCTaGAGGGGCTGTTTGAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: TRLTPVSPAQCFSSGNRRRVASS*RGCLKG Trigger: ACCCTTCAAACAGCCCCTGCAGCTTGAAGCCACCCT...TCTTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | AATCCCAGTGTTCCCGCTTTTACTGAGCACTGTGATGACAGGCACGTGCCACTTAGGGTGGCTTCAAGCTaGAGGGGCTGTTTGAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: NPSVPAFTEHCDDRHVPLRVASS*RGCLKG Trigger: ACCCTTCAAACAGCCCCTGCAGCTTGAAGCCACCCT...AAGTGGCACGTGCCTGTCATCACAGTGCTCAGTAAAAGCGGGAACACTGGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CCA 90 bp | AATCCCAGTGTTCCCGCTTTTACTGAGCACTGTGATGACAGGCACGTGCCACTTTTGAGATGCTCCCAGTaGCTCCCTGGGGAACACTCT | + |
|
Preference number: 2 (lower is better) Translates to: NPSVPAFTEHCDDRHVPLLRCSQ*LPGEHS Trigger: AGAGTGTTCCCCAGGGAGCCACTGGGAGCATCTCAA...AAGTGGCACGTGCCTGTCATCACAGTGCTCAGTAAAAGCGGGAACACTGGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTTTCCCTGCATCTGGCTATGGGATTGAGGAAGCTGTGGACATGCCCTTACCAGAAAGAACTTGGTaGAGCTGCCAGCAGAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: VSFPASGYGIEEAVDMPLPERTW*SCQQSG Trigger: TCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGG...TAAGGGCATGTCCACAGCTTCCTCAATCCCATAGCCAGATGCAGGGAAACTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACGTCATCAAAGCTCTTTaGAGAGAGGCAGGAATGGCG | + |
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Preference number: 2 (lower is better) Translates to: CLSLPNQKELGEAASRVDVIKAL*REAGMA Trigger: CGCCATTCCTGCCTCTCTGCAAAGAGCTTTGATGAC...GTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | GTTAGTTTCCCTGCATCTGGCTATGGGATTGAGGAAGCTGTGGACATGCCCTTAGGGCTGTTTGAAGGGTaGCTCAGTTTACCCAACCAG | + |
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Preference number: 2 (lower is better) Translates to: VSFPASGYGIEEAVDMPLGLFEG*LSLPNQ Trigger: CTGGTTGGGTAAACTGAGGCACCCTTCAAACAGCCC...TAAGGGCATGTCCACAGCTTCCTCAATCCCATAGCCAGATGCAGGGAAACTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCCAGAGCAGCTACCACATAGCCCAGGACCTTGAGCAATGCAACAATTCTGTTTCCCCAGCTCAGTaGTTCTCGTCAGGTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: RAQSSYHIAQDLEQCNNSVSPAQ*FSSGNR Trigger: TCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAAC...AGAATTGTTGCATTGCTCAAGGTCCTGGGCTATGTGGTAGCTGCTCTGGGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGAAGGGTGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCGTCATCAAAGCTCTTTaGAGAGAGGCAGGAATGGCG | + |
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Preference number: 2 (lower is better) Translates to: FEGCLSLPNQKELGEAASVIKAL*REAGMA Trigger: CGCCATTCCTGCCTCTCTGCAAAGAGCTTTGATGAC...GCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCCAGAGCAGCTACCACATAGCCCAGGACCTTGAGCAATGCAACAATTCTAAGCTGCCAGCAGAGTaGACTTTCAGGTCATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RAQSSYHIAQDLEQCNNSKLPAE*TFRSSK Trigger: CTTTGATGACCTGAAAGTCCACTCTGCTGGCAGCTT...AGAATTGTTGCATTGCTCAAGGTCCTGGGCTATGTGGTAGCTGCTCTGGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CCA 90 bp | CAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAAAGCTGCCAGCAGAGTaGACTTTCAGGTCATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QPDSHQFPQLSASRQVTEKLPAE*TFRSSK Trigger: CTTTGATGACCTGAAAGTCCACTCTGCTGGCAGCTT...TTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR CCA 72 bp | GCTTTGGTCGAGTGGCAGCAGGGACGTGGACATAGCTaGGGTGGCCAGAGCACAGGTGAGGGTGGCTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: ALVEWQQGRGHS*GGQSTGEGGFK Trigger: CTTGAAGCCACCCTCACCTGTGCTCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CAA 90 bp | CGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCAATGTCCTCAGAGCTTaGGTCGAGTGGCAGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: RTCEATTRLTPVSPAQCFNVLRA*VEWQQG Trigger: TCCCTGCTGCCACTCGACCAAAGCTCTGAGGACATT...GAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CAA 90 bp | CGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCGGTCATCAAAGCTCTTaGCAGAGAGGCAGGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: RTCEATTRLTPVSPAQCFGHQSS*QRGRNG Trigger: GCCATTCCTGCCTCTCTGCAAAGAGCTTTGATGACC...GAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR CCA 72 bp | TCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTaGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SRQVTEEMSSEL*SSGSRDVDIAG Trigger: CCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR GCA 72 bp | GAGGGTGGCTTCAAGCTGCAGGGGCTGTTTGAAGGGTaGCTCAGTTTACCCAACCAGAAAGAACTTGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: EGGFKLQGLFEG*LSLPNQKELGE Trigger: TTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAACAGCCCCTGCAGCTTGAAGCCACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CAA 90 bp | GCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTGGTCATCAAAGCTCTTaGCAGAGAGGCAGGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: ASVYPTRKNLVKLPAEWTGHQSS*QRGRNG Trigger: GCCATTCCTGCCTCTCTGCAAAGAGCTTTGATGACC...AGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGGGTCATCAAAGCTCTTaGCAGAGAGGCAGGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: QLSASRQVTEEMSSELWSGHQSS*QRGRNG Trigger: GCCATTCCTGCCTCTCTGCAAAGAGCTTTGATGACC...CGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CAA 90 bp | TTTGAAGGGTGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCGGTCATCAAAGCTCTTaGCAGAGAGGCAGGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: FEGCLSLPNQKELGEAASGHQSS*QRGRNG Trigger: GCCATTCCTGCCTCTCTGCAAAGAGCTTTGATGACC...GCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR-3UTR CAA 90 bp | CTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGTAGCTGCAGGGGCTGTTaGAAGGGTGCCTCAGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: LSASRQVTEEMSSELWSSSCRGC*KGASVY Trigger: GTAAACTGAGGCACCCTTCAAACAGCCCCTGCAGCT...ACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR TCA 72 bp | AGGGTGCCTCAGTTTACCCAACCAGAAAGAACTTGGTaGAGCTGCCAGCAGAGTGGACTTTCAGGTCATCAA | + |
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Preference number: 3 (lower is better) Translates to: RVPQFTQPERTW*SCQQSGLSGHQ Trigger: TTGATGACCTGAAAGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR CCA 72 bp | CCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTaGACTTTCAGGTCATCAAAGCTCTTTGCAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: PTRKNLVKLPAE*TFRSSKLFAER Trigger: CCTCTCTGCAAAGAGCTTTGATGACCTGAAAGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| 3UTR GCA 72 bp | CAGAGCAGCTACCACATAGCCCAGGACCTTGAGCAATaGAACAATTCTTATCCTAGAGCTAGCCTATGCTTC | + |
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Preference number: 3 (lower is better) Translates to: QSSYHIAQDLEQ*NNSYPRASLCF Trigger: GAAGCATAGGCTAGCTCTAGGATAAGAATTGTTGCATTGCTCAAGGTCCTGGGCTATGTGGTAGCTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | GCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGTGGCTTTGGGCTCTTaGGCTCCAGCTCCCGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AVALVRRQPDSHQFPQLSVALGS*APAPAW Trigger: CCAGGCGGGAGCTGGAGCCCAAGAGCCCAAAGCCAC...ACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | TCAGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAGAGGCAGGAGGGACAGGTaGCTTTGGGCTCTTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SELWSSGSRDVDIAGVARGRRDR*LWALGL Trigger: GAGCCCAAGAGCCCAAAGCCACCTGTCCCTCCTGCC...TCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR GCA 90 bp | AGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAGAGCGTCACAGTAGCAGGCTaGTGGCTGCCATTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RALVEWQQGRGHSWGGQSVTVAG*WLPLLL Trigger: CAGCAGCAATGGCAGCCAGCAGCCTGCTACTGTGAC...GCTCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | GCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTACAGTAGCAGGCTGCTaGCTGCCATTGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVALVRRQPDSHQFPQLSTVAGC*LPLLLG Trigger: CCCCAGCAGCAATGGCAGCCAGCAGCCTGCTACTGT...ACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR GCA 90 bp | CGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGCTGGCTGCCATTGCTaGTGGGGTCCAGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQPDSHQFPQLSASRQVTAGCHC*WGPGQE Trigger: CTCCTGCCCTGGACCCCAGCAGCAATGGCAGCCAGC...TGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR GCA 90 bp | GCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGTCACAGTAGCAGGCTaGTGGCTGCCATTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVALVRRQPDSHQFPQLSVTVAG*WLPLLL Trigger: CAGCAGCAATGGCAGCCAGCAGCCTGCTACTGTGAC...ACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | AGCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGGCTCCAGCTCCCGCCTaGTCCTCATTCTCCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRRTCEATTRLTPVSPAQAPAPA*SSFSCC Trigger: ACAACAGGAGAATGAGGACCAGGCGGGAGCTGGAGC...CTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | GCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTCCAGCTCCCGCCTaGTCCTCATTCTCCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVALVRRQPDSHQFPQLSAPAPA*SSFSCC Trigger: ACAACAGGAGAATGAGGACCAGGCGGGAGCTGGAGC...ACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | CGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCAGGGACAGGTGGCTTTaGGCTCTTGGGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTCEATTRLTPVSPAQCFRDRWL*ALGLQL Trigger: GAGCTGGAGCCCAAGAGCCCAAAGCCACCTGTCCCT...GAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | GTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACGGCTGCCATTGCTGCTaGGGTCCAGGGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTEEMSSELWSSGSRDVDGCHCC*GPGQEG Trigger: TCCCTCCTGCCCTGGACCCCAGCAGCAATGGCAGCC...GTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | CGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGGCTGCCATTGCTGCTaGGGTCCAGGGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQPDSHQFPQLSASRQVTGCHCC*GPGQEG Trigger: TCCCTCCTGCCCTGGACCCCAGCAGCAATGGCAGCC...TGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | TGTCTAGCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGACAGTAGCAGGCTGCTaGCTGCCATTGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CLAVALVRRQPDSHQFPQTVAGC*LPLLLG Trigger: CCCCAGCAGCAATGGCAGCCAGCAGCCTGCTACTGT...CTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGCTAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR GCA 90 bp | ACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAGCTGGCTGCCATTGCTaGTGGGGTCCAGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRLTPVSPAQCFSSGNRRAGCHC*WGPGQE Trigger: CTCCTGCCCTGGACCCCAGCAGCAATGGCAGCCAGC...TCTTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTGCTGGCTGCCATTGCTaGTGGGGTCCAGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASVYPTRKNLVKLPAEWTAGCHC*WGPGQE Trigger: CTCCTGCCCTGGACCCCAGCAGCAATGGCAGCCAGC...AGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAGTGGCTTTGGGCTCTTaGGCTCCAGCTCCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLTPVSPAQCFSSGNRRVALGS*APAPAW Trigger: CCAGGCGGGAGCTGGAGCCCAAGAGCCCAAAGCCAC...TCTTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | GTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACGGCAGGAGGGACAGGTaGCTTTGGGCTCTTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTEEMSSELWSSGSRDVDGRRDR*LWALGL Trigger: GAGCCCAAGAGCCCAAAGCCACCTGTCCCTCCTGCC...GTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGCTGGCTGCCATTGCTaGTGGGGTCCAGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAQCFSSGNRRNVLRALVAGCHC*WGPGQE Trigger: CTCCTGCCCTGGACCCCAGCAGCAATGGCAGCCAGC...GACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | TCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCGTGGCTTTGGGCTCTTaGGCTCCAGCTCCCGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHQFPQLSASRQVTEEMSVALGS*APAPAW Trigger: CCAGGCGGGAGCTGGAGCCCAAGAGCCCAAAGCCAC...GGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | GTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACAGGGACAGGTGGCTTTaGGCTCTTGGGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTEEMSSELWSSGSRDVDRDRWL*ALGLQL Trigger: GAGCTGGAGCCCAAGAGCCCAAAGCCACCTGTCCCT...GTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTGGCAGGAGGGACAGGTaGCTTTGGGCTCTTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVYPTRKNLVKLPAEWTGRRDR*LWALGL Trigger: GAGCCCAAGAGCCCAAAGCCACCTGTCCCTCCTGCC...AGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | GTTAGTTTCCCTGCATCTGGCTATGGGATTGAGGAAGCTGTGGACATGCCCTTAGGCTGCCATTGCTGCTaGGGTCCAGGGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSFPASGYGIEEAVDMPLGCHCC*GPGQEG Trigger: TCCCTCCTGCCCTGGACCCCAGCAGCAATGGCAGCC...TAAGGGCATGTCCACAGCTTCCTCAATCCCATAGCCAGATGCAGGGAAACTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | TCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCGGCTGCCATTGCTGCTaGGGTCCAGGGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHQFPQLSASRQVTEEMSGCHCC*GPGQEG Trigger: TCCCTCCTGCCCTGGACCCCAGCAGCAATGGCAGCC...GGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | TTTGAAGGGTGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCGGCTGCCATTGCTGCTaGGGTCCAGGGCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FEGCLSLPNQKELGEAASGCHCC*GPGQEG Trigger: TCCCTCCTGCCCTGGACCCCAGCAGCAATGGCAGCC...GCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | AGAGCCCAGAGCAGCTACCACATAGCCCAGGACCTTGAGCAATGCAACAATTCTCGGCGTCCCCCAAAGTaGTGGCTGTGGTCATCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RAQSSYHIAQDLEQCNNSRRPPK*WLWSSR Trigger: GCGAGATGACCACAGCCACCACTTTGGGGGACGCCG...AGAATTGTTGCATTGCTCAAGGTCCTGGGCTATGTGGTAGCTGCTCTGGGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105860.9 |
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| CDS-3UTR GCA 90 bp | TCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTTTCGCTGCTGGCTGCCATTaGTGCTGGGGTCCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVYPTRKNLVKLPAEWTFAAGCH*CWGPGQ Trigger: CTGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAGC...GAAAGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | CGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGGGCGTCCTCTCCCCTaGTCATGTTCAGCGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQPDSHQFPQLSASRQVTGRPLP*SCSARR Trigger: TCTTCTCGCTGAACATGACCAGGGGAGAGGACGCCC...TGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTAGGGACAGGTGGCTTTaGGCTCTTGGGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVYPTRKNLVKLPAEWTRDRWL*ALGLQL Trigger: GAGCTGGAGCCCAAGAGCCCAAAGCCACCTGTCCCT...AGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACAGGGACAGGTGGCTTTaGGCTCTTGGGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSLPNQKELGEAASRVDRDRWL*ALGLQL Trigger: GAGCTGGAGCCCAAGAGCCCAAAGCCACCTGTCCCT...GTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | GCTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGGGCAGGAGGGACAGGTaGCTTTGGGCTCTTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQCFSSGNRRNVLRALVEGRRDR*LWALGL Trigger: GAGCCCAAGAGCCCAAAGCCACCTGTCCCTCCTGCC...CTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR GCA 90 bp | GCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTGTCACAGTAGCAGGCTaGTGGCTGCCATTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASVYPTRKNLVKLPAEWTVTVAG*WLPLLL Trigger: CAGCAGCAATGGCAGCCAGCAGCCTGCTACTGTGAC...AGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | ACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAGGGCGTCCTCTCCCCTaGTCATGTTCAGCGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLTPVSPAQCFSSGNRRGRPLP*SCSARR Trigger: TCTTCTCGCTGAACATGACCAGGGGAGAGGACGCCC...TCTTCTGTTACCTGACGAGAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | AGAGCCCAGAGCAGCTACCACATAGCCCAGGACCTTGAGCAATGCAACAATTCTGCTCCAGCTCCCGCCTaGTCCTCATTCTCCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAQSSYHIAQDLEQCNNSAPAPA*SSFSCC Trigger: ACAACAGGAGAATGAGGACCAGGCGGGAGCTGGAGC...AGAATTGTTGCATTGCTCAAGGTCCTGGGCTATGTGGTAGCTGCTCTGGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | CCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTTTCAGGTCATCAAGGGACAGGTGGCTTTaGGCTCTTGGGCTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTRKNLVKLPAEWTFRSSRDRWL*ALGLQL Trigger: GAGCTGGAGCCCAAGAGCCCAAAGCCACCTGTCCCT...TGATGACCTGAAAGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTGAAGGGTGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGGCAGGAGGGACAGGTaGCTTTGGGCTCTTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLKGASVYPTRKNLVKLPGRRDR*LWALGL Trigger: GAGCCCAAGAGCCCAAAGCCACCTGTCCCTCCTGCC...TGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCACAGTAGCAGGCTGCTaGCTGCCATTGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PAQCFSSGNRRNVLRALVTVAGC*LPLLLG Trigger: CCCCAGCAGCAATGGCAGCCAGCAGCCTGCTACTGT...GACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| 3UTR CAA 72 bp | ACAGGCACGTGCCACTTTATCCAGCCTCTGTACCCTTaGTTAAAGGGGGAGAGCGCTGACTGGCCATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGTCHFIQPLYP*LKGESADWPLG Trigger: TCCTAATGGCCAGTCAGCGCTCTCCCCCTTTAACAAAGGGTACAGAGGCTGGATAAAGTGGCACGTGCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR GCA 90 bp | CAGGGGCTGTTTGAAGGGTGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGTCACAGTAGCAGGCTaGTGGCTGCCATTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLFEGCLSLPNQKELGEVTVAG*WLPLLL Trigger: CAGCAGCAATGGCAGCCAGCAGCCTGCTACTGTGAC...TTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAACAGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGGCTGTTTGAAGGGTGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGGGCGTCCTCTCCCCTaGTCATGTTCAGCGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGLFEGCLSLPNQKELGEGRPLP*SCSARR Trigger: TCTTCTCGCTGAACATGACCAGGGGAGAGGACGCCC...TTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAACAGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGTACAGTAGCAGGCTGCTaGCTGCCATTGCTGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSASRQVTEEMSSELWSSTVAGC*LPLLLG Trigger: CCCCAGCAGCAATGGCAGCCAGCAGCCTGCTACTGT...ACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
||
| 3UTR CAA 72 bp | TTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTaGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSGNRRNVLRA*VEWQQGRGHSW Trigger: CCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | TGTTTGAAGGGTGCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGGGCGTCCTCTCCCCTaGTCATGTTCAGCGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: CLKGASVYPTRKNLVKLPGRPLP*SCSARR Trigger: TCTTCTCGCTGAACATGACCAGGGGAGAGGACGCCC...TGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | CTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGTGGGCGTCCTCTCCCCTaGTCATGTTCAGCGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LSASRQVTEEMSSELWSSGRPLP*SCSARR Trigger: TCTTCTCGCTGAACATGACCAGGGGAGAGGACGCCC...ACTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CCA 90 bp | GAGCAATGCAACAATTCTTATCCTAGAGCTAGCCTATGCTTCTCATCCTTGAGCACAGTAGCAGGCTGCTaGCTGCCATTGCTGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: EQCNNSYPRASLCFSSLSTVAGC*LPLLLG Trigger: CCCCAGCAGCAATGGCAGCCAGCAGCCTGCTACTGT...GCTCAAGGATGAGAAGCATAGGCTAGCTCTAGGATAAGAATTGTTGCATTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR GCA 90 bp | GCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTGCTCCCAGTACAAGATaGCACAGAAAACAGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ASVYPTRKNLVKLPAEWTAPSTR*HRKQGF Trigger: GAAACCCTGTTTTCTGTGGCATCTTGTACTGGGAGC...AGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105860.9 |
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| 3UTR CAA 72 bp | TTGAAGGGTGCCTCAGTTTACCCAACCAGAAAGAACTaGGTGAAGCTGCCAGCAGAGTGGACTTTCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LKGASVYPTRKN*VKLPAEWTFRS Trigger: TGACCTGAAAGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGCACCCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS CCA 90 bp | CTGCTGGCTGCCATTGCTGCTGGGGTCCAGGGCAGGAGGGACAGGTaGCTTTGGGCTCTTGGGCTCCAGCTCCCGCCTGGTCCTCATTCT | + |
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Preference number: 5 (lower is better) Translates to: LLAAIAAGVQGRRDR*LWALGLQLPPGPHS Trigger: AGAATGAGGACCAGGCGGGAGCTGGAGCCCAAGAGCCCAAAGCCACCTGTCCCTCCTGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS GCA 90 bp | GTCTCCACATGGACATTGGCAGGGTCGAAGGTCACAGTAGCAGGCTaGTGGCTGCCATTGCTGCTGGGGTCCAGGGCAGGAGGGACAGGT | + |
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Preference number: 5 (lower is better) Translates to: VSTWTLAGSKVTVAG*WLPLLLGSRAGGTG Trigger: ACCTGTCCCTCCTGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAGCCTGCTACTGTGACCTTCGACCCTGCCAATGTCCATGTGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | TGTCTAGCCGTCGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGGGCTGCTGGCTGCCATaGCTGCTGGGGTCCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CLAVALVRRQPDSHQFPQGCWLP*LLGSRA Trigger: TGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAGCC...CTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCGACGGCTAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS CCA 90 bp | CAGCCACGATGGCTCCAGAGCTCTTATACAGGGCGTCCTCTCCCCTaGTCATGTTCAGCGAGAAGACGGCGTCCCCCAAAGTGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QPRWLQSSYTGRPLP*SCSARRRRPPKWWL Trigger: CAGCCACCACTTTGGGGGACGCCGTCTTCTCGCTGAACATGACCAGGGGAGAGGACGCCCTGTATAAGAGCTCTGGAGCCATCGTGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 ENSMUST00000123632.2 ENSMUST00000154518.2 |
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| CDS-3UTR CAA 90 bp | AGAGCCCAGAGCAGCTACCACATAGCCCAGGACCTTGAGCAATGCAACAATTCTGGTGGCTTTGGGCTCTaGGGCTCCAGCTCCCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RAQSSYHIAQDLEQCNNSGGFGL*GSSSRL Trigger: CAGGCGGGAGCTGGAGCCCAAGAGCCCAAAGCCACC...AGAATTGTTGCATTGCTCAAGGTCCTGGGCTATGTGGTAGCTGCTCTGGGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | GCCTCAGTTTACCCAACCAGAAAGAACTTGGTGAAGCTGCCAGCAGAGTGGACTGGCTGCTGGCTGCCATaGCTGCTGGGGTCCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: ASVYPTRKNLVKLPAEWTGCWLP*LLGSRA Trigger: TGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAGCC...AGTCCACTCTGCTGGCAGCTTCACCAAGTTCTTTCTGGTTGGGTAAACTGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | AGAGCCCAGAGCAGCTACCACATAGCCCAGGACCTTGAGCAATGCAACAATTCTGGCTGCTGGCTGCCATaGCTGCTGGGGTCCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RAQSSYHIAQDLEQCNNSGCWLP*LLGSRA Trigger: TGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAGCC...AGAATTGTTGCATTGCTCAAGGTCCTGGGCTATGTGGTAGCTGCTCTGGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | GCTCAGTGCTTCTCGTCAGGTAACAGAAGAAATGTCCTCAGAGCTTTGGTCGAGGGCTGCTGGCTGCCATaGCTGCTGGGGTCCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: AQCFSSGNRRNVLRALVEGCWLP*LLGSRA Trigger: TGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAGCC...CTCGACCAAAGCTCTGAGGACATTTCTTCTGTTACCTGACGAGAAGCACTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | AGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAGAGCGTCCTCATTCTCCTGTaGTACATCTTCAGCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: RALVEWQQGRGHSWGGQSVLILL*YIFSRI Trigger: GATCCTGCTGAAGATGTACAACAGGAGAATGAGGAC...GCTCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | TCAGAGCTTTGGTCGAGTGGCAGCAGGGACGTGGACATAGCTGGGGTGGCCAGAGTCCTCATTCTCCTGTaGTACATCTTCAGCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: SELWSSGSRDVDIAGVARVLILL*YIFSRI Trigger: GATCCTGCTGAAGATGTACAACAGGAGAATGAGGAC...TCTGGCCACCCCAGCTATGTCCACGTCCCTGCTGCCACTCGACCAAAGCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | GAGCAATGCAACAATTCTTATCCTAGAGCTAGCCTATGCTTCTCATCCTTGAGCGGCTGCTGGCTGCCATaGCTGCTGGGGTCCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: EQCNNSYPRASLCFSSLSGCWLP*LLGSRA Trigger: TGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAGCC...GCTCAAGGATGAGAAGCATAGGCTAGCTCTAGGATAAGAATTGTTGCATTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | CGCACTTGTGAGGCGACAACCAGACTCACACCAGTTTCCCCAGCTCAGTGCTTCGTCCTCATTCTCCTGTaGTACATCTTCAGCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: RTCEATTRLTPVSPAQCFVLILL*YIFSRI Trigger: GATCCTGCTGAAGATGTACAACAGGAGAATGAGGAC...GAAGCACTGAGCTGGGGAAACTGGTGTGAGTCTGGTTGTCGCCTCACAAGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS-3UTR CAA 90 bp | AATCCCAGTGTTCCCGCTTTTACTGAGCACTGTGATGACAGGCACGTGCCACTTGTCCTCATTCTCCTGTaGTACATCTTCAGCAGGATC | + |
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Preference number: 5 (lower is better) Translates to: NPSVPAFTEHCDDRHVPLVLILL*YIFSRI Trigger: GATCCTGCTGAAGATGTACAACAGGAGAATGAGGAC...AAGTGGCACGTGCCTGTCATCACAGTGCTCAGTAAAAGCGGGAACACTGGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064481.15 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS CCA 72 bp | GCCATTGCTGCTGGGGTCCAGGGCAGGAGGGACAGGTaGCTTTGGGCTCTTGGGCTCCAGCTCCCGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AIAAGVQGRRDR*LWALGLQLPPG Trigger: ACCAGGCGGGAGCTGGAGCCCAAGAGCCCAAAGCCACCTGTCCCTCCTGCCCTGGACCCCAGCAGCAATGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS GCA 72 bp | TGGACATTGGCAGGGTCGAAGGTCACAGTAGCAGGCTaGTGGCTGCCATTGCTGCTGGGGTCCAGGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WTLAGSKVTVAG*WLPLLLGSRAG Trigger: TCCTGCCCTGGACCCCAGCAGCAATGGCAGCCAGCAGCCTGCTACTGTGACCTTCGACCCTGCCAATGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 |
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| CDS CCA 72 bp | TCAGCGAGAAGACGGCGTCCCCCAAAGTGGTGGCTGTaGTCATCTCGCCCCTGCTCCCAGTACAAGATGCCA | + |
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Preference number: 6 (lower is better) Translates to: SARRRRPPKWWL*SSRPCSQYKMP Trigger: TGGCATCTTGTACTGGGAGCAGGGGCGAGATGACCACAGCCACCACTTTGGGGGACGCCGTCTTCTCGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105860.9 |
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| CDS CCA 72 bp | TGGTCATGTTCAGCGAGAAGACGGCGTCCCCCAAAGTaGTGGCTGTGGTCATCTCGCCCCTGCTCCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: WSCSARRRRPPK*WLWSSRPCSQY Trigger: GTACTGGGAGCAGGGGCGAGATGACCACAGCCACCACTTTGGGGGACGCCGTCTTCTCGCTGAACATGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105860.9 |
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| CDS CCA 72 bp | TGGCTCCAGAGCTCTTATACAGGGCGTCCTCTCCCCTaGTCATGTTCAGCGAGAAGACGGCGTCCCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: WLQSSYTGRPLP*SCSARRRRPPK Trigger: CTTTGGGGGACGCCGTCTTCTCGCTGAACATGACCAGGGGAGAGGACGCCCTGTATAAGAGCTCTGGAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 ENSMUST00000123632.2 ENSMUST00000154518.2 |
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| CDS CAA 90 bp | TTTGGGCTCTTGGGCTCCAGCTCCCGCCTGGTCCTCATTCTCCTGTaGTACATCTTCAGCAGGATCAGCACCAAGGTGACAATGATGATG | + |
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Preference number: 6 (lower is better) Translates to: FGLLGSSSRLVLILL*YIFSRISTKVTMMM Trigger: CATCATCATTGTCACCTTGGTGCTGATCCTGCTGAAGATGTACAACAGGAGAATGAGGACCAGGCGGGAGCTGGAGCCCAAGAGCCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000064481.15 ENSMUST00000105857.8 ENSMUST00000105858.8 ENSMUST00000105859.8 ENSMUST00000105860.9 ENSMUST00000123632.2 |
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