Pregenerated sensors for NCLN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020238Ensembl transcript IDs: ENSMUST00000020463.14, ENSMUST00000118498.8, ENSMUST00000124437.2
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCGGCTTCTGGGACCCAGCCACTGGGGAGGCCAACACTAGTGTGTaGCCCTTCAGTGCACGTGGCCCGGGCCATCATTCCATCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: TGFWDPATGEANTSV*PFSARGPGHHSIPV Trigger: CACTGGGATGGAATGATGGCCCGGGCCACGTGCACTGAAGGGCCACACACTAGTGTTGGCCTCCCCAGTGGCTGGGTCCCAGAAGCCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR CCA 90 bp | CAGGCTGACAGCGGATGCCTCTGCACAACCGCAGAGACCGGCTTCTaGGACCCAGCCACTGGGGAGGCCAACACTAGTGTGTGGCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: QADSGCLCTTAETGF*DPATGEANTSVWPF Trigger: GAAGGGCCACACACTAGTGTTGGCCTCCCCAGTGGCTGGGTCCCAGAAGCCGGTCTCTGCGGTTGTGCAGAGGCATCCGCTGTCAGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR CCA 90 bp | GTGGGGGTGGGCCAGGCCTCAGCAGGCGTGAGGGACAGAAGCAGCTaGTCTTCAGCTGGTCCCCAGCCTGACACCTCTTGGGTCATATTG | + |
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Preference number: 1 (lower is better) Translates to: VGVGQASAGVRDRSS*SSAGPQPDTSWVIL Trigger: CAATATGACCCAAGAGGTGTCAGGCTGGGGACCAGCTGAAGACCAGCTGCTTCTGTCCCTCACGCCTGCTGAGGCCTGGCCCACCCCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 90 bp | GTAAGAGTAGAAAGAACAAGAGTGCCCAGGGCCAGGGCAGCAGGCTaGGCCCTCTCGCTCTACGACACGCATGCCACGAGGGTGGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: VRVERTRVPRARAAG*ALSLYDTHATRVAA Trigger: GGCTGCCACCCTCGTGGCATGCGTGTCGTAGAGCGAGAGGGCTCAGCCTGCTGCCCTGGCCCTGGGCACTCTTGTTCTTTCTACTCTTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 90 bp | ACTCCAGAACAGGACCAACTCCTGCCCAGTCACCAGCGTCAGGACTaGGCGAAGGGACACTTGCAGGAGGGGACAGAACCTCAGGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TPEQDQLLPSHQRQD*AKGHLQEGTEPQGA Trigger: AGCCCCCTGAGGTTCTGTCCCCTCCTGCAAGTGTCCCTTCGCTCAGTCCTGACGCTGGTGACTGGGCAGGAGTTGGTCCTGTTCTGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR CCA 90 bp | AGGTCAACCGTCAGCACTAGTGTCCCCCTCCCAAGGCCATCCTGTTaGGGACATCCAGGGCTGTGCTGGGCCTGGCTGTTCCATCAGACA | + |
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Preference number: 1 (lower is better) Translates to: RSTVSTSVPLPRPSC*GHPGLCWAWLFHQT Trigger: TGTCTGATGGAACAGCCAGGCCCAGCACAGCCCTGGATGTCCCCAACAGGATGGCCTTGGGAGGGGGACACTAGTGCTGACGGTTGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 90 bp | GGTATGTCCAGTGGTGGAGGATGTGACAACAGGCAGGGCGGGGTATaGGGAGGAAAAGCAGGGAGACACTGTCAGGTGCTGGCCAGCGCT | + |
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Preference number: 1 (lower is better) Translates to: GMSSGGGCDNRQGGV*GGKAGRHCQVLASA Trigger: AGCGCTGGCCAGCACCTGACAGTGTCTCCCTGCTTTTCCTCCTCATACCCCGCCCTGCCTGTTGTCACATCCTCCACCACTGGACATACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR CCA 90 bp | GCTGTGCTGGGCCTGGCTGTTCCATCAGACACTATGACAGAGGGGTaGACTCCCCAGAATGTATCACAGGTAGGGAAACTGAGGCTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: AVLGLAVPSDTMTEG*TPQNVSQVGKLRLG Trigger: CCCCAGCCTCAGTTTCCCTACCTGTGATACATTCTGGGGAGTCCACCCCTCTGTCATAGTGTCTGATGGAACAGCCAGGCCCAGCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 90 bp | GCTGGTCCCCAGCCTGACACCTCTTGGGTCATATTGCTATTGAATTaGTTCACCGTGGGGTCCCTGAGGTCAACCGTCAGCACTAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: AGPQPDTSWVILLLN*FTVGSLRSTVSTSV Trigger: GACACTAGTGCTGACGGTTGACCTCAGGGACCCCACGGTGAATCAATTCAATAGCAATATGACCCAAGAGGTGTCAGGCTGGGGACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 90 bp | AGGCGTGAGGGACAGAAGCAGCTGGTCTTCAGCTGGTCCCCAGCCTaGCACCTCTTGGGTCATATTGCTATTGAATTGATTCACCGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: RREGQKQLVFSWSPA*HLLGHIAIELIHRG Trigger: CCCACGGTGAATCAATTCAATAGCAATATGACCCAAGAGGTGTCAGGCTGGGGACCAGCTGAAGACCAGCTGCTTCTGTCCCTCACGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 90 bp | AAGGAAGCAGTGTTCATTGAACAGTCCAGGGTAGATGGCCGGGCCTaGTGTGACACCGCCAGAGACCAAGGACAGCAGCACAATAGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: KEAVFIEQSRVDGRA*CDTARDQGQQHNSG Trigger: TCCACTATTGTGCTGCTGTCCTTGGTCTCTGGCGGTGTCACATCAGGCCCGGCCATCTACCCTGGACTGTTCAATGAACACTGCTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
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| 3UTR CCA 90 bp | ATAGTGGATGTTCCTCAGGACACCTGGAGGCTCGGTCCTTCAATATaGCTTTTATTTTGTAACCCACCAACTGCAGACCCACGGCCACCC | + |
|
Preference number: 1 (lower is better) Translates to: IVDVPQDTWRLGPSI*LLFCNPPTADPRPP Trigger: GGGTGGCCGTGGGTCTGCAGTTGGTGGGTTACAAAATAAAAGCCATATTGAAGGACCGAGCCTCCAGGTGTCCTGAGGAACATCCACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
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| 3UTR CCA 90 bp | GAGACCAAGGACAGCAGCACAATAGTGGATGTTCCTCAGGACACCTaGAGGCTCGGTCCTTCAATATGGCTTTTATTTTGTAACCCACCA | + |
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Preference number: 1 (lower is better) Translates to: ETKDSSTIVDVPQDT*RLGPSIWLLFCNPP Trigger: TGGTGGGTTACAAAATAAAAGCCATATTGAAGGACCGAGCCTCCAGGTGTCCTGAGGAACATCCACTATTGTGCTGCTGTCCTTGGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
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| 3UTR-3UTR TCA 90 bp | GGGCCATCCATCCCCATGCCCTGTGAGGACAGAGGAAGGGGGCGTGCCCTGTGTGCCAGGGCAGCAGGCTaGGCCCTCTCGCTCTACGAC | + |
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Preference number: 2 (lower is better) Translates to: GPSIPMPCEDRGRGRALCARAAG*ALSLYD Trigger: GTCGTAGAGCGAGAGGGCTCAGCCTGCTGCCCTGGC...ACACAGGGCACGCCCCCTTCCTCTGTCCTCACAGGGCATGGGGATGGATGGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGGGCAGCAGGCTGAGCCCTCTCGCTCTACGACACGCATGCCACGAGGGTAGGCAGGGCGGGGTATaGGGAGGAAAAGCAGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GQGSRLSPLALRHACHEGRQGGV*GGKAGR Trigger: TCTCCCTGCTTTTCCTCCTCATACCCCGCCCTGCCT...ACCCTCGTGGCATGCGTGTCGTAGAGCGAGAGGGCTCAGCCTGCTGCCCTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCCATCCATCCCCATGCCCTGTGAGGACAGAGGAAGGGGGCGTGCCCTGTGTGGAGACACTGTCAGGTaGTGGCCAGCGCTAGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: GPSIPMPCEDRGRGRALCGDTVR*WPALGG Trigger: TCCCCCTAGCGCTGGCCAGCACCTGACAGTGTCTCC...ACACAGGGCACGCCCCCTTCCTCTGTCCTCACAGGGCATGGGGATGGATGGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGAAGGGACACTTGCAGGAGGGGACAGAACCTCAGGGGGCTCAGATCAGCTGGCAGAGACCGGCTTCTaGGACCCAGCCACTGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SEGTLAGGDRTSGGSDQLAETGF*DPATGE Trigger: CTCCCCAGTGGCTGGGTCCCAGAAGCCGGTCTCTGC...CAGCTGATCTGAGCCCCCTGAGGTTCTGTCCCCTCCTGCAAGTGTCCCTTCGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAAAGCAGGGAGACACTGTCAGGTGCTGGCCAGCGCTAGGGGGAGGCAGGCTGCCAACACTAGTGTGTaGCCCTTCAGTGCACGTGGC | + |
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Preference number: 2 (lower is better) Translates to: GKAGRHCQVLASARGRQAANTSV*PFSARG Trigger: GCCACGTGCACTGAAGGGCCACACACTAGTGTTGGC...AGCCTGCCTCCCCCTAGCGCTGGCCAGCACCTGACAGTGTCTCCCTGCTTTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGCACACTCCAGAACAGGACCAACTCCTGCCCAGTCACCAGCGTCAGGACTGCAGTGGTGGAGGATGTaGCAACAGGCAGGGCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: TAHSRTGPTPAQSPASGLQWWRM*QQAGRG Trigger: ACCCCGCCCTGCCTGTTGTCACATCCTCCACCACTG...CAGTCCTGACGCTGGTGACTGGGCAGGAGTTGGTCCTGTTCTGGAGTGTGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR GCA 72 bp | CTGGCCAGCGCTAGGGGGAGGCAGGCTGACAGCGGATaGCTCTGCACAACCGCAGAGACCGGCTTCTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: LASARGRQADSG*LCTTAETGFWD Trigger: GTCCCAGAAGCCGGTCTCTGCGGTTGTGCAGAGGCATCCGCTGTCAGCCTGCCTCCCCCTAGCGCTGGCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR CCA 72 bp | TGGGACCCAGCCACTGGGGAGGCCAACACTAGTGTGTaGCCCTTCAGTGCACGTGGCCCGGGCCATCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: WDPATGEANTSV*PFSARGPGHHS Trigger: GGAATGATGGCCCGGGCCACGTGCACTGAAGGGCCACACACTAGTGTTGGCCTCCCCAGTGGCTGGGTCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
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| 3UTR CCA 72 bp | GGCCAGGCCTCAGCAGGCGTGAGGGACAGAAGCAGCTaGTCTTCAGCTGGTCCCCAGCCTGACACCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: GQASAGVRDRSS*SSAGPQPDTSW Trigger: CCAAGAGGTGTCAGGCTGGGGACCAGCTGAAGACCAGCTGCTTCTGTCCCTCACGCCTGCTGAGGCCTGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 72 bp | GAAAGAACAAGAGTGCCCAGGGCCAGGGCAGCAGGCTaGGCCCTCTCGCTCTACGACACGCATGCCACGAGG | + |
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Preference number: 3 (lower is better) Translates to: ERTRVPRARAAG*ALSLYDTHATR Trigger: CCTCGTGGCATGCGTGTCGTAGAGCGAGAGGGCTCAGCCTGCTGCCCTGGCCCTGGGCACTCTTGTTCTTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR CCA 72 bp | AGCGGATGCCTCTGCACAACCGCAGAGACCGGCTTCTaGGACCCAGCCACTGGGGAGGCCAACACTAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SGCLCTTAETGF*DPATGEANTSV Trigger: CACACTAGTGTTGGCCTCCCCAGTGGCTGGGTCCCAGAAGCCGGTCTCTGCGGTTGTGCAGAGGCATCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR CCA 72 bp | AAGGGGGCGTGCCCTGTGTCCTTTCCCAGTGACAGGTaGCACTGGCCTCAGACCCATAACCAGCTGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: KGACPVSFPSDR*HWPQTHNQLPG Trigger: CCCTGGCAGCTGGTTATGGGTCTGAGGCCAGTGCCACCTGTCACTGGGAAAGGACACAGGGCACGCCCCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGGGCAGCAGGCTGAGCCCTCTCGCTCTACGACACGCATGCCACGAGGGTCAGGGAGAGGTGTCCTaGCATCCTAGTGACCCATCA | + |
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Preference number: 3 (lower is better) Translates to: GQGSRLSPLALRHACHEGQGEVS*HPSDPS Trigger: TGATGGGTCACTAGGATGCAAGGACACCTCTCCCTG...ACCCTCGTGGCATGCGTGTCGTAGAGCGAGAGGGCTCAGCCTGCTGCCCTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 72 bp | CAGGACCAACTCCTGCCCAGTCACCAGCGTCAGGACTaGGCGAAGGGACACTTGCAGGAGGGGACAGAACCT | + |
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Preference number: 3 (lower is better) Translates to: QDQLLPSHQRQD*AKGHLQEGTEP Trigger: AGGTTCTGTCCCCTCCTGCAAGTGTCCCTTCGCTCAGTCCTGACGCTGGTGACTGGGCAGGAGTTGGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR-3UTR CAA 90 bp | CCATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGCAGGGAGAGGTGTCCTaGCATCCTAGTGACCCATCA | + |
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Preference number: 3 (lower is better) Translates to: PSFHPSGLICRCAGLSSRQGEVS*HPSDPS Trigger: TGATGGGTCACTAGGATGCAAGGACACCTCTCCCTG...CCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
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| 3UTR TCA 72 bp | CTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGTGTaGATAGTACCTCCTGGGCCACCTGTACATGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LCGSFGLAAVGV*IVPPGPPVHGH Trigger: GTGGCCATGTACAGGTGGCCCAGGAGGTACTATTCACACACCCACAGCGGCCAGACCGAACGAACCACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
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| 3UTR TCA 72 bp | AGTGGTGGAGGATGTGACAACAGGCAGGGCGGGGTATaGGGAGGAAAAGCAGGGAGACACTGTCAGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SGGGCDNRQGGV*GGKAGRHCQVL Trigger: CAGCACCTGACAGTGTCTCCCTGCTTTTCCTCCTCATACCCCGCCCTGCCTGTTGTCACATCCTCCACCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR TCA 72 bp | GTGTTCATTGAACAGTCCAGGGTAGATGGCCGGGCCTaGTGTGACACCGCCAGAGACCAAGGACAGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: VFIEQSRVDGRA*CDTARDQGQQH Trigger: GTGCTGCTGTCCTTGGTCTCTGGCGGTGTCACATCAGGCCCGGCCATCTACCCTGGACTGTTCAATGAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
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| 3UTR GCA 72 bp | GCCATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTaGGGGGCTCTCCTCCAGGGTCATTCAACGAAATGG | + |
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Preference number: 3 (lower is better) Translates to: AIIPSQWAHLQV*GALLQGHSTKW Trigger: CCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
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| 3UTR CCA 72 bp | TGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTaGTTCGTTCGGTCTGGCCGCTGTGGGTGTGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: CPCILVTHQNPL*FVRSGRCGCVN Trigger: ATTCACACACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
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| 3UTR TCA 72 bp | CAGCCTGACACCTCTTGGGTCATATTGCTATTGAATTaGTTCACCGTGGGGTCCCTGAGGTCAACCGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: QPDTSWVILLLN*FTVGSLRSTVS Trigger: GCTGACGGTTGACCTCAGGGACCCCACGGTGAATCAATTCAATAGCAATATGACCCAAGAGGTGTCAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR GCA 72 bp | GGGTCATTCAACGAAATGGACAGGGAGAGGTGTCCTTaGATCCTAGTGACCCATCAAAACCCTCTGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: GSFNEMDRERCP*ILVTHQNPLWF Trigger: GAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCCCTGTCCATTTCGTTGAATGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
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| 3UTR TCA 72 bp | GGACAGAAGCAGCTGGTCTTCAGCTGGTCCCCAGCCTaGCACCTCTTGGGTCATATTGCTATTGAATTGATT | + |
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Preference number: 3 (lower is better) Translates to: GQKQLVFSWSPA*HLLGHIAIELI Trigger: AATCAATTCAATAGCAATATGACCCAAGAGGTGTCAGGCTGGGGACCAGCTGAAGACCAGCTGCTTCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| 3UTR CCA 72 bp | GTTCCTCAGGACACCTGGAGGCTCGGTCCTTCAATATaGCTTTTATTTTGTAACCCACCAACTGCAGACCCA | + |
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Preference number: 3 (lower is better) Translates to: VPQDTWRLGPSI*LLFCNPPTADP Trigger: TGGGTCTGCAGTTGGTGGGTTACAAAATAAAAGCCATATTGAAGGACCGAGCCTCCAGGTGTCCTGAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
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| 3UTR GCA 72 bp | TGTGGCATGTCCCCAACTTCTCTTCCACTGAGAACATaGCCAGTGCTAAGGAAGCAGTGTTCATTGAACAGT | + |
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Preference number: 3 (lower is better) Translates to: CGMSPTSLPLRT*PVLRKQCSLNS Trigger: ACTGTTCAATGAACACTGCTTCCTTAGCACTGGGCATGTTCTCAGTGGAAGAGAAGTTGGGGACATGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
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| 3UTR CCA 72 bp | GACAGCAGCACAATAGTGGATGTTCCTCAGGACACCTaGAGGCTCGGTCCTTCAATATGGCTTTTATTTTGT | + |
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Preference number: 3 (lower is better) Translates to: DSSTIVDVPQDT*RLGPSIWLLFC Trigger: ACAAAATAAAAGCCATATTGAAGGACCGAGCCTCCAGGTGTCCTGAGGAACATCCACTATTGTGCTGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
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| CDS-3UTR CCA 90 bp | AGGGTGGCAGCCATCACTGCTGAGCAGAGGCAGCCCACAGCGGGTGGGGGTGGGAAGCTGGGCGGCCCGTaGCTGGTTGGTGAGCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: RVAAITAEQRQPTAGGGGKLGGP*LVGEPV Trigger: GACTGGCTCACCAACCAGCCACGGGCCGCCCAGCTT...CCCACCCCCACCCGCTGTGGGCTGCCTCTGCTCAGCAGTGATGGCTGCCACCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR CCA 90 bp | GGCCAGGGCAGCAGGCTGAGCCCTCTCGCTCTACGACACGCATGCCACGAGGGTCTGCTCCGTGAACACTaGCATGTCTGGGGGCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GQGSRLSPLALRHACHEGLLREH*HVWGRP Trigger: GGGACGCCCCCAGACATGCCAGTGTTCACGGAGCAG...ACCCTCGTGGCATGCGTGTCGTAGAGCGAGAGGGCTCAGCCTGCTGCCCTGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR TCA 90 bp | CCATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGCATGCGGTACACGGTaGACTCGTGCGCGGCGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PSFHPSGLICRCAGLSSRACGTR*TRARRR Trigger: CCGACGCCGCGCACGAGTTCACCGTGTACCGCATGC...CCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR TCA 90 bp | CCAGCCACTGGGGAGGCCAACACTAGTGTGTGGCCCTTCAGTGCACGTGGCCCGTGCGGGCCTCTGTGTTaGGCACTGCATTCCGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: PATGEANTSVWPFSARGPCGPLC*ALHSAC Trigger: GCACGCGGAATGCAGTGCTCAACACAGAGGCCCGCA...CGGGCCACGTGCACTGAAGGGCCACACACTAGTGTTGGCCTCCCCAGTGGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR GCA 90 bp | GCGGATGCCTCTGCACAACCGCAGAGACCGGCTTCTGGGACCCAGCCACTGGGGCCGTATGGCTGGCCCTaGAGGTCGTACTGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: ADASAQPQRPASGTQPLGPYGWP*RSYCCM Trigger: CATGCAGCAGTACGACCTGCAGGGCCAGCCATACGG...CCCCAGTGGCTGGGTCCCAGAAGCCGGTCTCTGCGGTTGTGCAGAGGCATCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR GCA 90 bp | AGGGTGGCAGCCATCACTGCTGAGCAGAGGCAGCCCACAGCGGGTGGGGGTGGGTGCAGGTCGTACTGCTaGATGCGGTACACGGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: RVAAITAEQRQPTAGGGGCRSYC*MRYTVN Trigger: GTTCACCGTGTACCGCATGCAGCAGTACGACCTGCA...CCCACCCCCACCCGCTGTGGGCTGCCTCTGCTCAGCAGTGATGGCTGCCACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR GCA 90 bp | AGGGTGGCAGCCATCACTGCTGAGCAGAGGCAGCCCACAGCGGGTGGGGGTGGGCTTGCCCCCTCCGGATaGGAAGAACAGGAGGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: RVAAITAEQRQPTAGGGGLAPSG*EEQEVV Trigger: TACAACCTCCTGTTCTTCGCATCCGGAGGGGGCAAG...CCCACCCCCACCCGCTGTGGGCTGCCTCTGCTCAGCAGTGATGGCTGCCACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR CCA 90 bp | AGCGAAGGGACACTTGCAGGAGGGGACAGAACCTCAGGGGGCTCAGATCAGCTGGCAGAGGCAGAGCCCTaGGAGGCAGAGGCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SEGTLAGGDRTSGGSDQLAEAEP*EAEAAW Trigger: CCAGGCTGCCTCTGCCTCCCAGGGCTCTGCCTCTGC...CAGCTGATCTGAGCCCCCTGAGGTTCTGTCCCCTCCTGCAAGTGTCCCTTCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCTGGGCGGCCCGTGGCTaGTTGGTGAGCCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SFHPSGLICRCAGLSSRVWAARG*LVSQSM Trigger: CATGGACTGGCTCACCAACCAGCCACGGGCCGCCCA...GACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CCATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGAAGCTGGGCGGCCCGTaGCTGGTTGGTGAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSFHPSGLICRCAGLSSRKLGGP*LVGEPV Trigger: GACTGGCTCACCAACCAGCCACGGGCCGCCCAGCTT...CCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGAGGACAGAGGAAGGGGGCGTGCCCTGTGTCCTTTCCCAGTGACAGGTTGCGGGCCTCTGTGTTaGGCACTGCATTCCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCEDRGRGRALCPFPVTGCGPLC*ALHSAC Trigger: GCACGCGGAATGCAGTGCTCAACACAGAGGCCCGCA...ACCTGTCACTGGGAAAGGACACAGGGCACGCCCCCTTCCTCTGTCCTCACAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGGGGGAGGCAGGCTGACAGCGGATGCCTCTGCACAACCGCAGAGACCGGCGTACCATGGAGAAGCTaGCATCAGGGAACTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ARGRQADSGCLCTTAETGVPWRS*HQGTGA Trigger: CGCACCAGTTCCCTGATGTCAGCTTCTCCATGGTAC...GCCGGTCTCTGCGGTTGTGCAGAGGCATCCGCTGTCAGCCTGCCTCCCCCTAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGCCACTGGGGAGGCCAACACTAGTGTGTGGCCCTTCAGTGCACGTGGCCATTCCGCGTGCCGTATaGCTGGCCCTGCAGGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TQPLGRPTLVCGPSVHVAIPRAV*LALQVV Trigger: TACGACCTGCAGGGCCAGCCATACGGCACGCGGAAT...GGCCACGTGCACTGAAGGGCCACACACTAGTGTTGGCCTCCCCAGTGGCTGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAGGGCAGCAGGCTGAGCCCTCTCGCTCTACGACACGCATGCCACGAGGGTCGTAATGAGCCACGATaGCAATGGTGGGAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQGSRLSPLALRHACHEGRNEPR*QWWEGP Trigger: AGGACCTTCCCACCATTGTCATCGTGGCTCATTACG...ACCCTCGTGGCATGCGTGTCGTAGAGCGAGAGGGCTCAGCCTGCTGCCCTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCATCCATCCCCATGCCCTGTGAGGACAGAGGAAGGGGGCGTGCCCTGTGTCTTGCCCCCTCCGGATaGGAAGAACAGGAGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPSIPMPCEDRGRGRALCLAPSG*EEQEVV Trigger: TACAACCTCCTGTTCTTCGCATCCGGAGGGGGCAAG...ACACAGGGCACGCCCCCTTCCTCTGTCCTCACAGGGCATGGGGATGGATGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGAGCAGGCGCAGGTGGCTaGCACGTCCCACAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVCGALLQGHSTKWTGRAGAGG*HVPQCP Trigger: TGGACACTGTGGGACGTGGCAGCCACCTGCGCCTGC...TCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGGCAGGCGCAGGTGGCTaGCACGTCCCACAGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLQVCGALLQGHSTKWTGAGAGG*HVPQCP Trigger: TGGACACTGTGGGACGTGGCAGCCACCTGCGCCTGC...CCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | AGCGAAGGGACACTTGCAGGAGGGGACAGAACCTCAGGGGGCTCAGATCAGCTGGGAGGCTTGGACACATaGAGGCGCAGGTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEGTLAGGDRTSGGSDQLGGLDT*RRRWLP Trigger: TGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCC...CAGCTGATCTGAGCCCCCTGAGGTTCTGTCCCCTCCTGCAAGTGTCCCTTCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCACTGGGGAGGCCAACACTAGTGTGTGGCCCTTCAGTGCACGTGGCCCGGGACCACAGTCTCCATaGCCAGCATCTCAGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PATGEANTSVWPFSARGPGPQSP*PASQAQ Trigger: TTGAGCCTGAGATGCTGGCCATGGAGACTGTGGTCC...CGGGCCACGTGCACTGAAGGGCCACACACTAGTGTTGGCCTCCCCAGTGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | GCGGATGCCTCTGCACAACCGCAGAGACCGGCTTCTGGGACCCAGCCACTGGGGGGAAACCATTGGCTGTaGCCGTGTGCAGCAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: ADASAQPQRPASGTQPLGGNHWL*PCAAVL Trigger: AAGTACTGCTGCACACGGCCACAGCCAATGGTTTCC...CCCCAGTGGCTGGGTCCCAGAAGCCGGTCTCTGCGGTTGTGCAGAGGCATCCGC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGTGGGCGGCCCGTGGCTaGTTGGTGAGCCAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: WAHLQVCGALLQGHSTKWWAARG*LVSQSM Trigger: CATGGACTGGCTCACCAACCAGCCACGGGCCGCCCA...CCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCCAGGGCCAGGGCAGCAGGCACTGTGCCTTGGCCTTaGGCAGCAGTCTCTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: AARVRVERTRVPRARAAGTVPWP*AAVSAP Trigger: CGGTGCAGAGACTGCTGCTCAAGGCCAAGGCACAGT...GCCTGCTGCCCTGGCCCTGGGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCCAGGGCCAGGGCAGCAGGCGAGCCAATCGCTCACTaGCTGGCTCTGGGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AARVRVERTRVPRARAAGEPIAH*LALGST Trigger: AGTGGAGCCCAGAGCCAGGCAGTGAGCGATTGGCTC...GCCTGCTGCCCTGGCCCTGGGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GCGGATGCCTCTGCACAACCGCAGAGACCGGCTTCTGGGACCCAGCCACTGGGGTGTACGCTGCATGTGTaGGCTTGTATGTGTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADASAQPQRPASGTQPLGCTLHV*ACMCRG Trigger: GCCTCTACACATACAAGCGCACACATGCAGCGTACA...CCCCAGTGGCTGGGTCCCAGAAGCCGGTCTCTGCGGTTGTGCAGAGGCATCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCCTGTGAGGACAGAGGAAGGGGGCGTGCCCTGTGTCCTTTCCCAGTGACACAATCGCTCACTGCCTaGCTCTGGGCTCCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MPCEDRGRGRALCPFPVTQSLTA*LWAPLV Trigger: GACCAGTGGAGCCCAGAGCCAGGCAGTGAGCGATTG...TGTCACTGGGAAAGGACACAGGGCACGCCCCCTTCCTCTGTCCTCACAGGGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGAGGACAGAGGAAGGGGGCGTGCCCTGTGTCCTTTCCCAGTGACAGGTAGGCTGGAGTCTGTGTaGTCCAGGCTGTCCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCEDRGRGRALCPFPVTGRLESV*SRLSSS Trigger: GCTTGAGGACAGCCTGGACCACACAGACTCCAGCCT...ACCTGTCACTGGGAAAGGACACAGGGCACGCCCCCTTCCTCTGTCCTCACAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCCAGTGTCCCTTCCCGTaGAGGCTTGGACACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFHPSGLICRCAGLSSRVQCPFP*RLGHMQ Trigger: CTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTG...GACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGCGAGGCCCTGCACGGTaGCTCTCCAGATGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLQVCGALLQGHSTKWTGRGPAR*LSRCDS Trigger: GCTGTCACATCTGGAGAGCCACCGTGCAGGGCCTCG...CCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGCGAGGCCCTGCACGGTaGCTCTCCAGATGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSDPSKPSVVRSVWPLWVRGPAR*LSRCDS Trigger: GCTGTCACATCTGGAGAGCCACCGTGCAGGGCCTCG...CACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | GAGACCTCAGGACTGCACACTCCAGAACAGGACCAACTCCTGCCCAGTCACCAGTCCGAGTCAGGGTCTTaGAGTCCACCCGGGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETSGLHTPEQDQLLPSHQSESGS*SPPGTA Trigger: TGCGGTCCCGGGTGGACTCCAAGACCCTGACTCGGA...CTGGTGACTGGGCAGGAGTTGGTCCTGTTCTGGAGTGTGCAGTCCTGAGGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGCTGTCAGGTTGTAGATaGCCCTGGTCAGGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSDPSKPSVVRSVWPLWVLSGCR*PWSGPP Trigger: CGGAGGCCCTGACCAGGGTCATCTACAACCTGACAG...CACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | CATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGCTGTCAGGTTGTAGATaGCCCTGGTCAGGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLQVCGALLQGHSTKWTGLSGCR*PWSGPP Trigger: CGGAGGCCCTGACCAGGGTCATCTACAACCTGACAG...CCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCACACTCCAGAACAGGACCAACTCCTGCCCAGTCACCAGCGTCAGGACTGCCTGCATCTGCTCCGTaGACACTGGCATGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TAHSRTGPTPAQSPASGLPASAP*TLACLG Trigger: CCCCAGACATGCCAGTGTTCACGGAGCAGATGCAGG...CAGTCCTGACGCTGGTGACTGGGCAGGAGTTGGTCCTGTTCTGGAGTGTGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGAACTGTGCCTTGGCCTTaGGCAGCAGTCTCTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LQVCGALLQGHSTKWTGRTVPWP*AAVSAP Trigger: CGGTGCAGAGACTGCTGCTCAAGGCCAAGGCACAGT...TCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGCCGCTGTGGGTGTGTGAATAGTACCTCCTGGGCCACCTGTACATGGCCAACTGTGCCTTGGCCTTaGGCAGCAGTCTCTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SGRCGCVNSTSWATCTWPTVPWP*AAVSAP Trigger: CGGTGCAGAGACTGCTGCTCAAGGCCAAGGCACAGT...TGGCCATGTACAGGTGGCCCAGGAGGTACTATTCACACACCCACAGCGGCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGGGACCATCTGCTCCGTaGACACTGGCATGTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WAHLQVCGALLQGHSTKWGPSAP*TLACLG Trigger: CCCCAGACATGCCAGTGTTCACGGAGCAGATGGTCC...CCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CCATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGCTCTGTGTTGAGCACTaGATTCCGCGTGCCGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFHPSGLICRCAGLSSRLCVEH*IPRAVW Trigger: CCATACGGCACGCGGAATGCAGTGCTCAACACAGAG...CCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCAAAGGCTACGTTGTCCTaGAGGAGGCTGGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSIPVGSSAGVRGSPPGSKATLS*RRLESV Trigger: CACAGACTCCAGCCTCCTGCAGGACAACGTAGCCTT...TGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | GTGCACGTGGCCCGGGCCATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGAAACCATTGGCTGTaGCCGTGTGCAGCAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VHVARAIIPSQWAHLQVCGNHWL*PCAAVL Trigger: AAGTACTGCTGCACACGGCCACAGCCAATGGTTTCC...GCACACCTGCAGATGAGCCCACTGGGATGGAATGATGGCCCGGGCCACGTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGCAATCGCTCACTGCCTaGCTCTGGGCTCCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WAHLQVCGALLQGHSTKWQSLTA*LWAPLV Trigger: GACCAGTGGAGCCCAGAGCCAGGCAGTGAGCGATTG...CCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | GACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGTGTGAATGGTGCCCTGGTAGTTaGACTTGCCCCCTCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DPSKPSVVRSVWPLWVCEWCPGS*TCPLRM Trigger: CATCCGGAGGGGGCAAGTTCAACTACCAGGGCACCA...TTCACACACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGTGTGAACCCTGCAGGTCGTACTaGTGCATGCGGTACACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPSKPSVVRSVWPLWVCEPCRSY*CMRYTV Trigger: CACCGTGTACCGCATGCAGCAGTACGACCTGCAGGG...TTCACACACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCCGCAGGAAGGCATGCTaGAGTGTCCCTTCCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCILVTHQNPLWFVRSGRRRKAC*SVPSRG Trigger: TCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCG...GCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGGACGATAAAGCCGAGTaGCAGGCACGACGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSDPSKPSVVRSVWPLWVDDKAE*QARRLQ Trigger: CTGAAGGCGTCGTGCCTGCCACTCGGCTTTATCGTC...CACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCCAGTGCTAAGGAAGCAGTGTTCATTGAACAGTCCAGGGTAGATGGCCGGCGCGTGCCGTATGGCTaGCCCTGCAGGTCGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPSAKEAVFIEQSRVDGRRVPYG*PCRSYC Trigger: GCAGTACGACCTGCAGGGCCAGCCATACGGCACGCG...CCGGCCATCTACCCTGGACTGTTCAATGAACACTGCTTCCTTAGCACTGGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
||
| CDS-3UTR CCA 90 bp | GGACAGGGAGAGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGCGTGCCGTATGGCTaGCCCTGCAGGTCGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGEVSLHPSDPSKPSVVRVPYG*PCRSYC Trigger: GCAGTACGACCTGCAGGGCCAGCCATACGGCACGCG...AACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCCCTGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGCAGAGGCAGAGCCCTaGGAGGCAGAGGCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCPCILVTHQNPLWFVRSAEAEP*EAEAAW Trigger: CCAGGCTGCCTCTGCCTCCCAGGGCTCTGCCTCTGC...AGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | AGCGAAGGGACACTTGCAGGAGGGGACAGAACCTCAGGGGGCTCAGATCAGCTGCCATCTGGAAACCATTaGCTGTGGCCGTGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEGTLAGGDRTSGGSDQLPSGNH*LWPCAA Trigger: TGCTGCACACGGCCACAGCCAATGGTTTCCAGATGG...CAGCTGATCTGAGCCCCCTGAGGTTCTGTCCCCTCCTGCAAGTGTCCCTTCGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCCAGGGCCAGGGCAGCAGGCGGCTCTGGGCTCCACTaGTCACCATCTGGAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: AARVRVERTRVPRARAAGGSGLH*SPSGNH Trigger: ATGGTTTCCAGATGGTGACCAGTGGAGCCCAGAGCC...GCCTGCTGCCCTGGCCCTGGGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCCTCACTGCCTGGCTCTaGGCTCCACTGGTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PCILVTHQNPLWFVRSGRLTAWL*APLVTI Trigger: GATGGTGACCAGTGGAGCCCAGAGCCAGGCAGTGAG...GCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCCTGTGAGGACAGAGGAAGGGGGCGTGCCCTGTGTCCTTTCCCAGTGACACGTAATGAGCCACGATaGCAATGGTGGGAAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPCEDRGRGRALCPFPVTRNEPR*QWWEGP Trigger: AGGACCTTCCCACCATTGTCATCGTGGCTCATTACG...TGTCACTGGGAAAGGACACAGGGCACGCCCCCTTCCTCTGTCCTCACAGGGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGTGCAGGTCGTACTGCTaGATGCGGTACACGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLQVCGALLQGHSTKWTGCRSYC*MRYTVN Trigger: GTTCACCGTGTACCGCATGCAGCAGTACGACCTGCA...CCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCACACTCCAGAACAGGACCAACTCCTGCCCAGTCACCAGCGTCAGGACTGCTCTGTGTTGAGCACTaGATTCCGCGTGCCGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: TAHSRTGPTPAQSPASGLLCVEH*IPRAVW Trigger: CCATACGGCACGCGGAATGCAGTGCTCAACACAGAG...CAGTCCTGACGCTGGTGACTGGGCAGGAGTTGGTCCTGTTCTGGAGTGTGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGAGGCCAGCAGCACAGAGATaGCACTCCCATTTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGVRGSPPGSFNEMDRERPAAQR*HSHLSL Trigger: CAGACTCAAATGGGAGTGGCATCTCTGTGCTGCTGG...CCTCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTCAGACCCATAACCAGCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCGGAGGCTTGGACACATaGAGGCGCAGGTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRPITSCQGKSRKNKSAGGLDT*RRRWLP Trigger: TGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCC...GGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGCTGGTTATGGGTCTGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCGCAGGAAGGCATGCTaGAGTGTCCCTTCCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLHPSDPSKPSVVRSVWPRRKAC*SVPSRG Trigger: TCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCG...CGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCCAGGGCCAGGGCAGCAGGCGAAAGTGCTCCAGTGTaGTCAGGAATGTCCCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AARVRVERTRVPRARAAGESAPV*SGMSRP Trigger: AGGACGGGACATTCCTGAGCACACTGGAGCACTTTC...GCCTGCTGCCCTGGCCCTGGGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGATGCCCCAATGCACAATaGCAGCAGCAGGTCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSGLICRCAGLSSRVIQRCPNAQ*QQQVKD Trigger: ATCTTTGACCTGCTGCTGGCATTGTGCATTGGGGCA...TCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCTGCCCCAATGCACAATaGCAGCAGCAGGTCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFHPSGLICRCAGLSSRVCPNAQ*QQQVKD Trigger: ATCTTTGACCTGCTGCTGGCATTGTGCATTGGGGCA...GACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCCGCTGTGGGTGTGTGAATAGTACCTCCTGGGCCACCTGTACATGGCCAGGACCACAGTCTCCATaGCCAGCATCTCAGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRCGCVNSTSWATCTWPGPQSP*PASQAQ Trigger: TTGAGCCTGAGATGCTGGCCATGGAGACTGTGGTCC...TGGCCATGTACAGGTGGCCCAGGAGGTACTATTCACACACCCACAGCGGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CCGCCAGAGACCAAGGACAGCAGCACAATAGTGGATGTTCCTCAGGACACCTGGAGGCTGGAGTCTGTGTaGTCCAGGCTGTCCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPETKDSSTIVDVPQDTWRLESV*SRLSSS Trigger: GCTTGAGGACAGCCTGGACCACACAGACTCCAGCCT...CCAGGTGTCCTGAGGAACATCCACTATTGTGCTGCTGTCCTTGGTCTCTGGCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
||
| CDS-3UTR CCA 90 bp | GACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGTGTGAACAGTGTCCCTTCCCGTaGAGGCTTGGACACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPSKPSVVRSVWPLWVCEQCPFP*RLGHMQ Trigger: CTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTG...TTCACACACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAGACCCATAACCAGCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCCTGCTCCGTGAACACTaGCATGTCTGGGGGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLRPITSCQGKSRKNKSALLREH*HVWGRP Trigger: GGGACGCCCCCAGACATGCCAGTGTTCACGGAGCAG...GGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGCTGGTTATGGGTCTGAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | ATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTTTGTCAGCCTTCACATaGTGCTGTCGCACGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IIPSQWAHLQVCGALLQGLSAFT*CCRTSF Trigger: GAAGGACGTGCGACAGCACCATGTGAAGGCTGACAA...ACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | CATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCACGTCATCCGCTAGATTaGTCTTCTTGTGTACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HSIPVGSSAGVRGSPPGSRHPLD*SSCVPW Trigger: CCATGGTACACAAGAAGATCAATCTAGCGGATGACG...TGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | CATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCACAAAGATGGCTGGCTTaGCCCTGTAAGCATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: HSIPVGSSAGVRGSPPGSQRWLA*PCKHSS Trigger: TGATGAATGCTTACAGGGTCAAGCCAGCCATCTTTG...TGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGCCCTGCAGGTCGTACTaGTGCATGCGGTACACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERCPCILVTHQNPLWFVRPCRSY*CMRYTV Trigger: CACCGTGTACCGCATGCAGCAGTACGACCTGCAGGG...CCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGGAGAGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGAGCCAATCGCTCACTaGCTGGCTCTGGGCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DRERCPCILVTHQNPLWFEPIAH*LALGST Trigger: AGTGGAGCCCAGAGCCAGGCAGTGAGCGATTGGCTC...GAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGCCAGCAGCACAGAGATaGCACTCCCATTTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAHLQVCGALLQGHSTKWPAAQR*HSHLSL Trigger: CAGACTCAAATGGGAGTGGCATCTCTGTGCTGCTGG...CCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCGGCTCTGGGCTCCACTaGTCACCATCTGGAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PCILVTHQNPLWFVRSGRGSGLH*SPSGNH Trigger: ATGGTTTCCAGATGGTGACCAGTGGAGCCCAGAGCC...GCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCTCACTGCCTGGCTCTaGGCTCCACTGGTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSLHPSDPSKPSVVRSVWLTAWL*APLVTI Trigger: GATGGTGACCAGTGGAGCCCAGAGCCAGGCAGTGAG...CCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTTCCGAGTCAGGGTCTTaGAGTCCACCCGGGACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RCPCILVTHQNPLWFVRSSESGS*SPPGTA Trigger: TGCGGTCCCGGGTGGACTCCAAGACCCTGACTCGGA...AGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | AGCGAAGGGACACTTGCAGGAGGGGACAGAACCTCAGGGGGCTCAGATCAGCTGCAAAGATGGCTGGCTTaGCCCTGTAAGCATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SEGTLAGGDRTSGGSDQLQRWLA*PCKHSS Trigger: TGATGAATGCTTACAGGGTCAAGCCAGCCATCTTTG...CAGCTGATCTGAGCCCCCTGAGGTTCTGTCCCCTCCTGCAAGTGTCCCTTCGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGAGGCAAAGATGGCTGGCTTaGCCCTGTAAGCATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AGVRGSPPGSFNEMDRERQRWLA*PCKHSS Trigger: TGATGAATGCTTACAGGGTCAAGCCAGCCATCTTTG...CCTCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGATAGATGGACAGCAGTaGCTCGTCCTCCACAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WAHLQVCGALLQGHSTKWIDGQQ*LVLHSK Trigger: TTTGCTGTGGAGGACGAGGCACTGCTGTCCATCTAT...CCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGATGCCCCAATGCACAATaGCAGCAGCAGGTCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQVCGALLQGHSTKWTGRCPNAQ*QQQVKD Trigger: ATCTTTGACCTGCTGCTGGCATTGTGCATTGGGGCA...TCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGACGATAAAGCCGAGTaGCAGGCACGACGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GEVSLHPSDPSKPSVVRSDDKAE*QARRLQ Trigger: CTGAAGGCGTCGTGCCTGCCACTCGGCTTTATCGTC...CGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | ATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCAGGTCAAAGATGGCTaGCTTGACCCTGTAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IIPSQWAHLQVCGALLQGQVKDG*LDPVSI Trigger: AATGCTTACAGGGTCAAGCCAGCCATCTTTGACCTG...ACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCAGACCCATAACCAGCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCGTACCATGGAGAAGCTaGCATCAGGGAACTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLRPITSCQGKSRKNKSAVPWRS*HQGTGA Trigger: CGCACCAGTTCCCTGATGTCAGCTTCTCCATGGTAC...GGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGCTGGTTATGGGTCTGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTACGCTGCATGTGTaGGCTTGTATGTGTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PCILVTHQNPLWFVRSGRCTLHV*ACMCRG Trigger: GCCTCTACACATACAAGCGCACACATGCAGCGTACA...GCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCATCTGGAAACCATTaGCTGTGGCCGTGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLHPSDPSKPSVVRSVWPSGNH*LWPCAA Trigger: TGCTGCACACGGCCACAGCCAATGGTTTCCAGATGG...CCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCACACTCCAGAACAGGACCAACTCCTGCCCAGTCACCAGCGTCAGGACTGCAGGTCAAAGATGGCTaGCTTGACCCTGTAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TAHSRTGPTPAQSPASGLQVKDG*LDPVSI Trigger: AATGCTTACAGGGTCAAGCCAGCCATCTTTGACCTG...CAGTCCTGACGCTGGTGACTGGGCAGGAGTTGGTCCTGTTCTGGAGTGTGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTAAGGCTACGTTGTCCTaGAGGAGGCTGGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCPCILVTHQNPLWFVRSKATLS*RRLESV Trigger: CACAGACTCCAGCCTCCTGCAGGACAACGTAGCCTT...AGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GATGTGACACCGCCAGAGACCAAGGACAGCAGCACAATAGTGGATGTTCCTCAGGAAAGTGCTCCAGTGTaGTCAGGAATGTCCCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DVTPPETKDSSTIVDVPQESAPV*SGMSRP Trigger: AGGACGGGACATTCCTGAGCACACTGGAGCACTTTC...CTGAGGAACATCCACTATTGTGCTGCTGTCCTTGGTCTCTGGCGGTGTCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAGACCCATAACCAGCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCTCTATCTGCTCCTCCTaGACCATCTGCTCCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLRPITSCQGKSRKNKSASICSS*TICSVN Trigger: GTTCACGGAGCAGATGGTCCAGGAGGAGCAGATAGA...GGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGCTGGTTATGGGTCTGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGGAGAGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCATAGATGGACAGCAGTaGCTCGTCCTCCACAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DRERCPCILVTHQNPLWFIDGQQ*LVLHSK Trigger: TTTGCTGTGGAGGACGAGGCACTGCTGTCCATCTAT...GAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR GCA 90 bp | GGACAGGGAGAGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTATGACTGAGTCTATCTaGTCCTCCTGGACCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQGEVSLHPSDPSKPSVVMTESI*SSWTIC Trigger: GCAGATGGTCCAGGAGGAGCAGATAGACTCAGTCAT...AACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCCCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118498.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTTTGTCAGCCTTCACATaGTGCTGTCGCACGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCPCILVTHQNPLWFVRSLSAFT*CCRTSF Trigger: GAAGGACGTGCGACAGCACCATGTGAAGGCTGACAA...AGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTCGTCATCCGCTAGATTaGTCTTCTTGTGTACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RCPCILVTHQNPLWFVRSRHPLD*SSCVPW Trigger: CCATGGTACACAAGAAGATCAATCTAGCGGATGACG...AGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| 3UTR CAA 72 bp | AGGGTCATTCAACGAAATGGACAGGGAGAGGTGTCCTaGCATCCTAGTGACCCATCAAAACCCTCTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVIQRNGQGEVS*HPSDPSKPSVV Trigger: AACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCCCTGTCCATTTCGTTGAATGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS TCA 90 bp | CGTATGGCTGGCCCTGCAGGTCGTACTGCTGCATGCGGTACACGGTaGACTCGTGCGCGGCGTCGGCGGCGGGCAGCGGCGGCGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: RMAGPAGRTAACGTR*TRARRRRRAAAAPR Trigger: TCGTGGCGCCGCCGCTGCCCGCCGCCGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCAGCCATACG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | TGGCCCTGCAGGTCGTACTGCTGCATGCGGTACACGGTGAACTCGTaGGCGGCGTCGGCGGCGGGCAGCGGCGGCGCCACGAGCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: WPCRSYCCMRYTVNS*AASAAGSGGATSSN Trigger: GTTGCTGCTCGTGGCGCCGCCGCTGCCCGCCGCCGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | ACTGCATTCCGCGTGCCGTATGGCTGGCCCTGCAGGTCGTACTGCTaGATGCGGTACACGGTGAACTCGTGCGCGGCGTCGGCGGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TAFRVPYGWPCRSYC*MRYTVNSCAASAAG Trigger: GCCCGCCGCCGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCAGCCATACGGCACGCGGAATGCAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | AGCACTGCATTCCGCGTGCCGTATGGCTGGCCCTGCAGGTCGTACTaGTGCATGCGGTACACGGTGAACTCGTGCGCGGCGTCGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: STAFRVPYGWPCRSY*CMRYTVNSCAASAA Trigger: CGCCGCCGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCAGCCATACGGCACGCGGAATGCAGTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | GCGGATGCCTCTGCACAACCGCAGAGACCGGCTTCTGGGACCCAGCCACTGGGGGCGGCCCGTGGCTGGTaGGTGAGCCAGTCCATGACT | + |
|
Preference number: 5 (lower is better) Translates to: ADASAQPQRPASGTQPLGAARGW*VSQSMT Trigger: AGTCATGGACTGGCTCACCAACCAGCCACGGGCCGC...CCCCAGTGGCTGGGTCCCAGAAGCCGGTCTCTGCGGTTGTGCAGAGGCATCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS TCA 90 bp | AGCGGCGGCTCAGCACATCTGCGTCCACCGTGCGGGCCTCTGTGTTaGGCACTGCATTCCGCGTGCCGTATGGCTGGCCCTGCAGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SGGSAHLRPPCGPLC*ALHSACRMAGPAGR Trigger: ACGACCTGCAGGGCCAGCCATACGGCACGCGGAATGCAGTGCTCAACACAGAGGCCCGCACGGTGGACGCAGATGTGCTGAGCCGCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS GCA 90 bp | GGGAACTGGTGCGCAGCCACCGTCTCCAGCTCTCGCAGGAAGGCATaGTGCAGTGTCCCTTCCCGTGGAGGCTTGGACACATGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GNWCAATVSSSRRKA*CSVPSRGGLDTCRR Trigger: GCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCGAGAGCTGGAGACGGTGGCTGCGCACCAGTTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 90 bp | CGCCACGAGCAGCAACACGGCGGGCAAGAAGACGATAAAGCCGAGTaGCAGGCACGACGCCTTCAGCACGTTCTCGAGCACCTCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RHEQQHGGQEDDKAE*QARRLQHVLEHLAR Trigger: GCGGGCGAGGTGCTCGAGAACGTGCTGAAGGCGTCGTGCCTGCCACTCGGCTTTATCGTCTTCTTGCCCGCCGTGTTGCTGCTCGTGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS CCA 90 bp | CGTCTCCAGCTCTCGCAGGAAGGCATGCTGCAGTGTCCCTTCCCGTaGAGGCTTGGACACATGCAGGCGCAGGTGGCTGCCACGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLQLSQEGMLQCPFP*RLGHMQAQVAATSH Trigger: GTGGGACGTGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCGAGAGCTGGAGACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | GCTCAGCACATCTGCGTCCACCGTGCGGGCCTCTGTGTTGAGCACTaGATTCCGCGTGCCGTATGGCTGGCCCTGCAGGTCGTACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQHICVHRAGLCVEH*IPRAVWLALQVVLL Trigger: CAGCAGTACGACCTGCAGGGCCAGCCATACGGCACGCGGAATGCAGTGCTCAACACAGAGGCCCGCACGGTGGACGCAGATGTGCTGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | AACTGGTGCGCAGCCACCGTCTCCAGCTCTCGCAGGAAGGCATGCTaGAGTGTCCCTTCCCGTGGAGGCTTGGACACATGCAGGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NWCAATVSSSRRKAC*SVPSRGGLDTCRRR Trigger: CCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCGAGAGCTGGAGACGGTGGCTGCGCACCAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 90 bp | GCTCTCGCAGGAAGGCATGCTGCAGTGTCCCTTCCCGTGGAGGCTTaGACACATGCAGGCGCAGGTGGCTGCCACGTCCCACAGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALAGRHAAVSLPVEA*THAGAGGCHVPQCP Trigger: TGGACACTGTGGGACGTGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCGAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS TCA 90 bp | GAAGAGGCGAGCCAGCTCCAGCAGCACAGAGATGCCACTCCCATTTaGGTCTGCGCCCAGGGACAGCCATGGGGCTACCCCAAAGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: EEASQLQQHRDATPI*VCAQGQPWGYPKGV Trigger: GACGCCTTTGGGGTAGCCCCATGGCTGTCCCTGGGCGCAGACTCAAATGGGAGTGGCATCTCTGTGCTGCTGGAGCTGGCTCGCCTCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS TCA 90 bp | TGCTGCTGCGAGGCCCTGCACGGTGGCTCTCCAGATGTGACAGCGTaGAGGCAGGAAGCCTTCGGATGGCAAAGCGCTCGTGTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCCEALHGGSPDVTA*RQEAFGWQSARVPR Trigger: CCTGGGAACACGAGCGCTTTGCCATCCGAAGGCTTCCTGCCTTCACGCTGTCACATCTGGAGAGCCACCGTGCAGGGCCTCGCAGCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | AGGAAGGCATGCTGCAGTGTCCCTTCCCGTGGAGGCTTGGACACATaGAGGCGCAGGTGGCTGCCACGTCCCACAGTGTCCAGGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKACCSVPSRGGLDT*RRRWLPRPTVSRHR Trigger: TCTGTGCCTGGACACTGTGGGACGTGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 90 bp | CCTGGCTCTGGGCTCCACTGGTCACCATCTGGAAACCATTGGCTGTaGCCGTGTGCAGCAGTACTTCAGCGGCAGAGGCAGAGCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSGLHWSPSGNHWL*PCAAVLQRQRQSPG Trigger: CCCAGGGCTCTGCCTCTGCCGCTGAAGTACTGCTGCACACGGCCACAGCCAATGGTTTCCAGATGGTGACCAGTGGAGCCCAGAGCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 90 bp | CGCCCCTCCACGCTGGTGATGAGCCAATCGCTCACTGCCTGGCTCTaGGCTCCACTGGTCACCATCTGGAAACCATTGGCTGTGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPSTLVMSQSLTAWL*APLVTIWKPLAVAV Trigger: CACGGCCACAGCCAATGGTTTCCAGATGGTGACCAGTGGAGCCCAGAGCCAGGCAGTGAGCGATTGGCTCATCACCAGCGTGGAGGGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS CCA 90 bp | TGCAGTGTCCCTTCCCGTGGAGGCTTGGACACATGCAGGCGCAGGTaGCTGCCACGTCCCACAGTGTCCAGGCACAGAACGAAGGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: CSVPSRGGLDTCRRR*LPRPTVSRHRTKAT Trigger: CGTAGCCTTCGTTCTGTGCCTGGACACTGTGGGACGTGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | CCATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTGCGGGCCTCTGTGTaGAGCACTGCATTCCGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSFHPSGLICRCAGLSSRVRASV*STAFRV Trigger: CACGCGGAATGCAGTGCTCAACACAGAGGCCCGCAC...CCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCACTGGGATGGAATGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR CAA 90 bp | GGCCAGGGCAGCAGGCTGAGCCCTCTCGCTCTACGACACGCATGCCACGAGGGTCTCAATCTCCATGAATaGCCGGACGACATCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQGSRLSPLALRHACHEGLNLHE*PDDILG Trigger: CCCCAGGATGTCGTCCGGCAATTCATGGAGATTGAG...ACCCTCGTGGCATGCGTGTCGTAGAGCGAGAGGGCTCAGCCTGCTGCCCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | TGTAGAGGCGCGAGAAGAGGCGAGCCAGCTCCAGCAGCACAGAGATaGCACTCCCATTTGAGTCTGCGCCCAGGGACAGCCATGGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CRGARRGEPAPAAQR*HSHLSLRPGTAMGL Trigger: TAGCCCCATGGCTGTCCCTGGGCGCAGACTCAAATGGGAGTGGCATCTCTGTGCTGCTGGAGCTGGCTCGCCTCTTCTCGCGCCTCTACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS GCA 90 bp | GCTGTCGCACGTCCTTCAGGTAGCGGCTCAGAAAGTGCTCCAGTGTaGTCAGGAATGTCCCGTCCTTGTCGAGAAGCTGGGCGGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: AVARPSGSGSESAPV*SGMSRPCREAGRPV Trigger: CACGGGCCGCCCAGCTTCTCGACAAGGACGGGACATTCCTGAGCACACTGGAGCACTTTCTGAGCCGCTACCTGAAGGACGTGCGACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGACCTTCCCGTGGAGGCTaGGACACATGCAGGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQVCGALLQGHSTKWTGRPSRGG*DTCRRR Trigger: CCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGG...TCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGCCGCTGTGGGTGTGTGAATAGTACCTCCTGGGCCACCTGTACATGGCCACCTTCCCGTGGAGGCTaGGACACATGCAGGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGRCGCVNSTSWATCTWPPSRGG*DTCRRR Trigger: CCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGG...TGGCCATGTACAGGTGGCCCAGGAGGTACTATTCACACACCCACAGCGGCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCACACTCCAGAACAGGACCAACTCCTGCCCAGTCACCAGCGTCAGGACTGTTCCGAGTCAGGGTCTaGGAGTCCACCCGGGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: TAHSRTGPTPAQSPASGLFRVRV*ESTRDR Trigger: GCGGTCCCGGGTGGACTCCAAGACCCTGACTCGGAA...CAGTCCTGACGCTGGTGACTGGGCAGGAGTTGGTCCTGTTCTGGAGTGTGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR CAA 90 bp | TGGGCTCATCTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGGCGGCCCGTGGCTGGTaGGTGAGCCAGTCCATGACT | + |
|
Preference number: 5 (lower is better) Translates to: WAHLQVCGALLQGHSTKWAARGW*VSQSMT Trigger: AGTCATGGACTGGCTCACCAACCAGCCACGGGCCGC...CCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAGATGAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS CCA 90 bp | TCACTGCCTGGCTCTGGGCTCCACTGGTCACCATCTGGAAACCATTaGCTGTGGCCGTGTGCAGCAGTACTTCAGCGGCAGAGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPGSGLHWSPSGNH*LWPCAAVLQRQRQS Trigger: GCTCTGCCTCTGCCGCTGAAGTACTGCTGCACACGGCCACAGCCAATGGTTTCCAGATGGTGACCAGTGGAGCCCAGAGCCAGGCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS CCA 90 bp | CTCAGGAATGTCCCGTCCTTGTCGAGAAGCTGGGCGGCCCGTGGCTaGTTGGTGAGCCAGTCCATGACTGAGTCTATCTGCTCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRNVPSLSRSWAARG*LVSQSMTESICSSW Trigger: CCAGGAGGAGCAGATAGACTCAGTCATGGACTGGCTCACCAACCAGCCACGGGCCGCCCAGCTTCTCGACAAGGACGGGACATTCCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR CAA 90 bp | CTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGAGTGCGGGCCTCTGTGTaGAGCACTGCATTCCGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQVCGALLQGHSTKWTGRVRASV*STAFRV Trigger: CACGCGGAATGCAGTGCTCAACACAGAGGCCCGCAC...TCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS GCA 90 bp | GCGGCCCGTGGCTGGTTGGTGAGCCAGTCCATGACTGAGTCTATCTaGTCCTCCTGGACCTGCATCTGCTCCGTGAACACTGGCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AARGWLVSQSMTESI*SSWTCICSVNTGMS Trigger: AGACATGCCAGTGTTCACGGAGCAGATGCAGGTCCAGGAGGAGCAGATAGACTCAGTCATGGACTGGCTCACCAACCAGCCACGGGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
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| CDS CCA 90 bp | AGCCAATCGCTCACTGCCTGGCTCTGGGCTCCACTGGTCACCATCTaGAAACCATTGGCTGTGGCCGTGTGCAGCAGTACTTCAGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSLTAWLWAPLVTI*KPLAVAVCSSTSAA Trigger: TGCCGCTGAAGTACTGCTGCACACGGCCACAGCCAATGGTTTCCAGATGGTGACCAGTGGAGCCCAGAGCCAGGCAGTGAGCGATTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS CCA 90 bp | AAGTGCTCCAGTGTGCTCAGGAATGTCCCGTCCTTGTCGAGAAGCTaGGCGGCCCGTGGCTGGTTGGTGAGCCAGTCCATGACTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KCSSVLRNVPSLSRS*AARGWLVSQSMTES Trigger: AGACTCAGTCATGGACTGGCTCACCAACCAGCCACGGGCCGCCCAGCTTCTCGACAAGGACGGGACATTCCTGAGCACACTGGAGCACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS-3UTR CAA 90 bp | TCTGGCCGCTGTGGGTGTGTGAATAGTACCTCCTGGGCCACCTGTACATGGCCAACCATCTGGAAACCATaGGCTGTGGCCGTGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRCGCVNSTSWATCTWPTIWKP*AVAVCS Trigger: GCTGCACACGGCCACAGCCAATGGTTTCCAGATGGT...TGGCCATGTACAGGTGGCCCAGGAGGTACTATTCACACACCCACAGCGGCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGAAGATGCCACTCCCATTaGAGTCTGCGCCCAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LQVCGALLQGHSTKWTGRRCHSH*SLRPGT Trigger: TGTCCCTGGGCGCAGACTCAAATGGGAGTGGCATCT...TCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGGTGTGCGGGGCTCTCCTCCAGGGTCATTCAACGAAATGGACAGGGAGAGAGAACGAAGGCTACGTaGTCCTGCAGGAGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CRCAGLSSRVIQRNGQGERTKAT*SCRRLE Trigger: CTCCAGCCTCCTGCAGGACAACGTAGCCTTCGTTCT...CTCTCCCTGTCCATTTCGTTGAATGACCCTGGAGGAGAGCCCCGCACACCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | CAGTCTCTGCACCGTCTGGACGGCTGTGTACGCCATGCCAAGGTATaGCCCAATGCACAATGCCAGCAGCAGGTCAAAGATGGCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSLHRLDGCVRHAKV*PNAQCQQQVKDGWL Trigger: AAGCCAGCCATCTTTGACCTGCTGCTGGCATTGTGCATTGGGGCATACCTTGGCATGGCGTACACAGCCGTCCAGACGGTGCAGAGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124437.2 |
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| CDS-3UTR CAA 90 bp | GACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGTGTGAAAGATGCCACTCCCATTaGAGTCTGCGCCCAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DPSKPSVVRSVWPLWVCERCHSH*SLRPGT Trigger: TGTCCCTGGGCGCAGACTCAAATGGGAGTGGCATCT...TTCACACACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCAGAACGAAGGCTACGTaGTCCTGCAGGAGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PCILVTHQNPLWFVRSGRRTKAT*SCRRLE Trigger: CTCCAGCCTCCTGCAGGACAACGTAGCCTTCGTTCT...GCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTTTCCGAGTCAGGGTCTaGGAGTCCACCCGGGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: RCPCILVTHQNPLWFVRSFRVRV*ESTRDR Trigger: GCGGTCCCGGGTGGACTCCAAGACCCTGACTCGGAA...AGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | CCGCCAGAGACCAAGGACAGCAGCACAATAGTGGATGTTCCTCAGGACACCTGGTACTGTGCCTTGGCCTaGAGCAGCAGTCTCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PPETKDSSTIVDVPQDTWYCALA*SSSLCT Trigger: GGTGCAGAGACTGCTGCTCAAGGCCAAGGCACAGTA...CCAGGTGTCCTGAGGAACATCCACTATTGTGCTGCTGTCCTTGGTCTCTGGCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
||
| CDS-3UTR CAA 90 bp | GACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGCCGCTGTGGGTGTGTGAACTCAATCTCCATGAATaGCCGGACGACATCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DPSKPSVVRSVWPLWVCELNLHE*PDDILG Trigger: CCCCAGGATGTCGTCCGGCAATTCATGGAGATTGAG...TTCACACACCCACAGCGGCCAGACCGAACGAACCACAGAGGGTTTTGATGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | AAGCCAGCGTTTGGTGCCCTGGTAGTTGAACTTGCCCCCTCCGGATaGGAAGAACAGGAGGTTGTACGCTGCATGTGTGCGCTTGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: KPAFGALVVELAPSG*EEQEVVRCMCALVC Trigger: ACATACAAGCGCACACATGCAGCGTACAACCTCCTGTTCTTCGCATCCGGAGGGGGCAAGTTCAACTACCAGGGCACCAAACGCTGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 90 bp | CTGGACGGCTGTGTACGCCATGCCAAGGTATGCCCCAATGCACAATaGCAGCAGCAGGTCAAAGATGGCTGGCTTGACCCTGTAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LDGCVRHAKVCPNAQ*QQQVKDGWLDPVSI Trigger: AATGCTTACAGGGTCAAGCCAGCCATCTTTGACCTGCTGCTGGCATTGTGCATTGGGGCATACCTTGGCATGGCGTACACAGCCGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS GCA 90 bp | CCGTCTTGTATAGCACGTGGAAGTGCTGGACGGCTGTGTACGCCATaGCAAGGTATGCCCCAATGCACAATGCCAGCAGCAGGTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSCIARGSAGRLCTP*QGMPQCTMPAAGQR Trigger: TCTTTGACCTGCTGCTGGCATTGTGCATTGGGGCATACCTTGGCATGGCGTACACAGCCGTCCAGCACTTCCACGTGCTATACAAGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTTCGGTCTGGTACTGTGCCTTGGCCTaGAGCAGCAGTCTCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: VSLHPSDPSKPSVVRSVWYCALA*SSSLCT Trigger: GGTGCAGAGACTGCTGCTCAAGGCCAAGGCACAGTA...CCAGACCGAACGAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGGAGAGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCTACTGTGCCTTGGCCTaGAGCAGCAGTCTCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: DRERCPCILVTHQNPLWFYCALA*SSSLCT Trigger: GGTGCAGAGACTGCTGCTCAAGGCCAAGGCACAGTA...GAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR CAA 90 bp | GTGCACGTGGCCCGGGCCATCATTCCATCCCAGTGGGCTCATCTGCAGGTGTGCGTAAGCATTCATCACTaGCTTCAACTGGTCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VHVARAIIPSQWAHLQVCVSIHH*LQLVIE Trigger: TTCTATGACCAGTTGAAGCAAGTGATGAATGCTTAC...GCACACCTGCAGATGAGCCCACTGGGATGGAATGATGGCCCGGGCCACGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTCAGACCCATAACCAGCTGCCAGGGTAAGAGTAGAAAGAACAAGAGTGCCGTAAGCATTCATCACTaGCTTCAACTGGTCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLRPITSCQGKSRKNKSAVSIHH*LQLVIE Trigger: TTCTATGACCAGTTGAAGCAAGTGATGAATGCTTAC...GGCACTCTTGTTCTTTCTACTCTTACCCTGGCAGCTGGTTATGGGTCTGAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS-3UTR CAA 90 bp | GACAGGGAGAGGTGTCCTTGCATCCTAGTGACCCATCAAAACCCTCTGTGGTTCGTAAGCATTCATCACTaGCTTCAACTGGTCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DRERCPCILVTHQNPLWFVSIHH*LQLVIE Trigger: TTCTATGACCAGTTGAAGCAAGTGATGAATGCTTAC...GAACCACAGAGGGTTTTGATGGGTCACTAGGATGCAAGGACACCTCTCCCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS TCA 72 bp | GGCCCTGCAGGTCGTACTGCTGCATGCGGTACACGGTaGACTCGTGCGCGGCGTCGGCGGCGGGCAGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GPAGRTAACGTR*TRARRRRRAAA Trigger: CGCCGCTGCCCGCCGCCGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | AGGTCGTACTGCTGCATGCGGTACACGGTGAACTCGTaGGCGGCGTCGGCGGCGGGCAGCGGCGGCGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: RSYCCMRYTVNS*AASAAGSGGAT Trigger: CGTGGCGCCGCCGCTGCCCGCCGCCGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 90 bp | CAGCGGCGGCTCAGCACATCTGCGTCCACCGTGCGGGCCTCTGTGTaGAGCACTGCATTCCGCGTGCCGTATGGCTGGCCCTGCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: QRRLSTSASTVRASV*STAFRVPYGWPCRS Trigger: CGACCTGCAGGGCCAGCCATACGGCACGCGGAATGCAGTGCTCAACACAGAGGCCCGCACGGTGGACGCAGATGTGCTGAGCCGCCGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | CGCGTGCCGTATGGCTGGCCCTGCAGGTCGTACTGCTaGATGCGGTACACGGTGAACTCGTGCGCGGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RVPYGWPCRSYC*MRYTVNSCAAS Trigger: CGACGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCAGCCATACGGCACGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | TTCCGCGTGCCGTATGGCTGGCCCTGCAGGTCGTACTaGTGCATGCGGTACACGGTGAACTCGTGCGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: FRVPYGWPCRSY*CMRYTVNSCAA Trigger: CGCCGCGCACGAGTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCAGCCATACGGCACGCGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | ATCTGCGTCCACCGTGCGGGCCTCTGTGTTGAGCACTaGATTCCGCGTGCCGTATGGCTGGCCCTGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ICVHRAGLCVEH*IPRAVWLALQV Trigger: GACCTGCAGGGCCAGCCATACGGCACGCGGAATGCAGTGCTCAACACAGAGGCCCGCACGGTGGACGCAGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | TGCTGCAGTGTCCCTTCCCGTGGAGGCTTGGACACATaGAGGCGCAGGTGGCTGCCACGTCCCACAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCSVPSRGGLDT*RRRWLPRPTVS Trigger: GGACACTGTGGGACGTGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | CCTTCCCGTGGAGGCTTGGACACATGCAGGCGCAGGTaGCTGCCACGTCCCACAGTGTCCAGGCACAGAACG | + |
|
Preference number: 6 (lower is better) Translates to: PSRGGLDTCRRR*LPRPTVSRHRT Trigger: CGTTCTGTGCCTGGACACTGTGGGACGTGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | CTCTCGCAGGAAGGCATGCTGCAGTGTCCCTTCCCGTaGAGGCTTGGACACATGCAGGCGCAGGTGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSQEGMLQCPFP*RLGHMQAQVAA Trigger: GGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCGAGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 72 bp | CTCAGCACATCTGCGTCCACCGTGCGGGCCTCTGTGTaGAGCACTGCATTCCGCGTGCCGTATGGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LSTSASTVRASV*STAFRVPYGWP Trigger: GGGCCAGCCATACGGCACGCGGAATGCAGTGCTCAACACAGAGGCCCGCACGGTGGACGCAGATGTGCTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 90 bp | AGCTCTCGCAGGAAGGCATGCTGCAGTGTCCCTTCCCGTGGAGGCTaGGACACATGCAGGCGCAGGTGGCTGCCACGTCCCACAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRRKACCSVPSRGG*DTCRRRWLPRPTVS Trigger: GGACACTGTGGGACGTGGCAGCCACCTGCGCCTGCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCGAGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS TCA 72 bp | TCAGCACATCTGCGTCCACCGTGCGGGCCTCTGTGTTaGGCACTGCATTCCGCGTGCCGTATGGCTGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAHLRPPCGPLC*ALHSACRMAGP Trigger: AGGGCCAGCCATACGGCACGCGGAATGCAGTGCTCAACACAGAGGCCCGCACGGTGGACGCAGATGTGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | GCGAGAAGAGGCGAGCCAGCTCCAGCAGCACAGAGATaGCACTCCCATTTGAGTCTGCGCCCAGGGACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARRGEPAPAAQR*HSHLSLRPGTA Trigger: GGCTGTCCCTGGGCGCAGACTCAAATGGGAGTGGCATCTCTGTGCTGCTGGAGCTGGCTCGCCTCTTCTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | GCAGCCACCGTCTCCAGCTCTCGCAGGAAGGCATGCTaGAGTGTCCCTTCCCGTGGAGGCTTGGACACATGC | + |
|
Preference number: 6 (lower is better) Translates to: AATVSSSRRKAC*SVPSRGGLDTC Trigger: GCATGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCGAGAGCTGGAGACGGTGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | TGCGCAGCCACCGTCTCCAGCTCTCGCAGGAAGGCATaGTGCAGTGTCCCTTCCCGTGGAGGCTTGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: CAATVSSSRRKA*CSVPSRGGLDT Trigger: TGTGTCCAAGCCTCCACGGGAAGGGACACTGCAGCATGCCTTCCTGCGAGAGCTGGAGACGGTGGCTGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 90 bp | CTGGTCAGGGCCTCCGCGATTATCCTCGTGTTCCGAGTCAGGGTCTaGGAGTCCACCCGGGACCGCACATCCATGATGCTGCTGCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVRASAIILVFRVRV*ESTRDRTSMMLLRG Trigger: GCCTCGCAGCAGCATCATGGATGTGCGGTCCCGGGTGGACTCCAAGACCCTGACTCGGAACACGAGGATAATCGCGGAGGCCCTGACCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 90 bp | AGAAGAGGCGAGCCAGCTCCAGCAGCACAGAGATGCCACTCCCATTaGAGTCTGCGCCCAGGGACAGCCATGGGGCTACCCCAAAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RRGEPAPAAQRCHSH*SLRPGTAMGLPQRR Trigger: ACGCCTTTGGGGTAGCCCCATGGCTGTCCCTGGGCGCAGACTCAAATGGGAGTGGCATCTCTGTGCTGCTGGAGCTGGCTCGCCTCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS TCA 72 bp | GAGGCCCTGCACGGTGGCTCTCCAGATGTGACAGCGTaGAGGCAGGAAGCCTTCGGATGGCAAAGCGCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: EALHGGSPDVTA*RQEAFGWQSAR Trigger: ACGAGCGCTTTGCCATCCGAAGGCTTCCTGCCTTCACGCTGTCACATCTGGAGAGCCACCGTGCAGGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | GTCCCGTCCTTGTCGAGAAGCTGGGCGGCCCGTGGCTaGTTGGTGAGCCAGTCCATGACTGAGTCTATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VPSLSRSWAARG*LVSQSMTESIC Trigger: GCAGATAGACTCAGTCATGGACTGGCTCACCAACCAGCCACGGGCCGCCCAGCTTCTCGACAAGGACGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | AGTGTGCTCAGGAATGTCCCGTCCTTGTCGAGAAGCTaGGCGGCCCGTGGCTGGTTGGTGAGCCAGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVLRNVPSLSRS*AARGWLVSQSM Trigger: CATGGACTGGCTCACCAACCAGCCACGGGCCGCCCAGCTTCTCGACAAGGACGGGACATTCCTGAGCACACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 72 bp | CCGTCCTTGTCGAGAAGCTGGGCGGCCCGTGGCTGGTaGGTGAGCCAGTCCATGACTGAGTCTATCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSLSRSWAARGW*VSQSMTESICS Trigger: GGAGCAGATAGACTCAGTCATGGACTGGCTCACCAACCAGCCACGGGCCGCCCAGCTTCTCGACAAGGACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 90 bp | TGGCTGCCACGTCCCACAGTGTCCAGGCACAGAACGAAGGCTACGTaGTCCTGCAGGAGGCTGGAGTCTGTGTGGTCCAGGCTGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WLPRPTVSRHRTKAT*SCRRLESVWSRLSS Trigger: TGAGGACAGCCTGGACCACACAGACTCCAGCCTCCTGCAGGACAACGTAGCCTTCGTTCTGTGCCTGGACACTGTGGGACGTGGCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 90 bp | AGGAATGTCCCGTCCTTGTCGAGAAGCTGGGCGGCCCGTGGCTGGTaGGTGAGCCAGTCCATGACTGAGTCTATCTGCTCCTCCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RNVPSLSRSWAARGW*VSQSMTESICSSWT Trigger: GGTCCAGGAGGAGCAGATAGACTCAGTCATGGACTGGCTCACCAACCAGCCACGGGCCGCCCAGCTTCTCGACAAGGACGGGACATTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | TTGAGCACTGCATTCCGCGTGCCGTATGGCTGGCCCTaGAGGTCGTACTGCTGCATGCGGTACACGGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSTAFRVPYGWP*RSYCCMRYTVN Trigger: GTTCACCGTGTACCGCATGCAGCAGTACGACCTGCAGGGCCAGCCATACGGCACGCGGAATGCAGTGCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | CAGCAACACGGCGGGCAAGAAGACGATAAAGCCGAGTaGCAGGCACGACGCCTTCAGCACGTTCTCGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QQHGGQEDDKAE*QARRLQHVLEH Trigger: GTGCTCGAGAACGTGCTGAAGGCGTCGTGCCTGCCACTCGGCTTTATCGTCTTCTTGCCCGCCGTGTTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | TCAGGCTCAATCTCCATGAATTGCCGGACGACATCCTaGGGCACGGCAGCCATGGCCCGGGGCAGGATGATA | + |
|
Preference number: 6 (lower is better) Translates to: SGSISMNCRTTS*GTAAMARGRMI Trigger: TATCATCCTGCCCCGGGCCATGGCTGCCGTGCCCCAGGATGTCGTCCGGCAATTCATGGAGATTGAGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | GGGCTCCACTGGTCACCATCTGGAAACCATTGGCTGTaGCCGTGTGCAGCAGTACTTCAGCGGCAGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLHWSPSGNHWL*PCAAVLQRQRQ Trigger: CTGCCTCTGCCGCTGAAGTACTGCTGCACACGGCCACAGCCAATGGTTTCCAGATGGTGACCAGTGGAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | GGCTCTGGGCTCCACTGGTCACCATCTGGAAACCATTaGCTGTGGCCGTGTGCAGCAGTACTTCAGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSGLHWSPSGNH*LWPCAAVLQRQ Trigger: CTGCCGCTGAAGTACTGCTGCACACGGCCACAGCCAATGGTTTCCAGATGGTGACCAGTGGAGCCCAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 72 bp | GCCTCCGCGATTATCCTCGTGTTCCGAGTCAGGGTCTaGGAGTCCACCCGGGACCGCACATCCATGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASAIILVFRVRV*ESTRDRTSMML Trigger: CAGCATCATGGATGTGCGGTCCCGGGTGGACTCCAAGACCCTGACTCGGAACACGAGGATAATCGCGGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 72 bp | AGAAAGTGCTCCAGTGTGCTCAGGAATGTCCCGTCCTaGTCGAGAAGCTGGGCGGCCCGTGGCTGGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKCSSVLRNVPS*SRSWAARGWLV Trigger: CACCAACCAGCCACGGGCCGCCCAGCTTCTCGACAAGGACGGGACATTCCTGAGCACACTGGAGCACTTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS TCA 72 bp | GGCTGTCCTCAAGCCAGCGTTTGGTGCCCTGGTAGTTaGACTTGCCCCCTCCGGATGCGAAGAACAGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GCPQASVWCPGS*TCPLRMRRTGG Trigger: ACCTCCTGTTCTTCGCATCCGGAGGGGGCAAGTTCAACTACCAGGGCACCAAACGCTGGCTTGAGGACAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS TCA 72 bp | TGTCTGGGGGCGTCCCCTTCTCTGTCAGGTTGTAGATaGCCCTGGTCAGGGCCTCCGCGATTATCCTCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CLGASPSLSGCR*PWSGPPRLSSC Trigger: ACACGAGGATAATCGCGGAGGCCCTGACCAGGGTCATCTACAACCTGACAGAGAAGGGGACGCCCCCAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | ACAGTGTCCAGGCACAGAACGAAGGCTACGTTGTCCTaGAGGAGGCTGGAGTCTGTGTGGTCCAGGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVSRHRTKATLS*RRLESVWSRLS Trigger: GGACAGCCTGGACCACACAGACTCCAGCCTCCTGCAGGACAACGTAGCCTTCGTTCTGTGCCTGGACACTGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | GCAGTCTCTGCACCGTCTGGACGGCTGTGTACGCCATaGCAAGGTATGCCCCAATGCACAATGCCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AVSAPSGRLCTP*QGMPQCTMPAA Trigger: TGCTGCTGGCATTGTGCATTGGGGCATACCTTGGCATGGCGTACACAGCCGTCCAGACGGTGCAGAGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124437.2 |
||
| CDS CAA 72 bp | TGGCTCTGGGCTCCACTGGTCACCATCTGGAAACCATaGGCTGTGGCCGTGTGCAGCAGTACTTCAGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WLWAPLVTIWKP*AVAVCSSTSAA Trigger: TGCCGCTGAAGTACTGCTGCACACGGCCACAGCCAATGGTTTCCAGATGGTGACCAGTGGAGCCCAGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | CAGTCCATGACTGAGTCTATCTGCTCCTCCTGGACCTaGATCTGCTCCGTGAACACTGGCATGTCTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSMTESICSSWT*ICSVNTGMSGG Trigger: GCCCCCAGACATGCCAGTGTTCACGGAGCAGATGCAGGTCCAGGAGGAGCAGATAGACTCAGTCATGGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020463.14 |
||
| CDS GCA 72 bp | CGTCCTTCAGGTAGCGGCTCAGAAAGTGCTCCAGTGTaGTCAGGAATGTCCCGTCCTTGTCGAGAAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPSGSGSESAPV*SGMSRPCREAG Trigger: CCCAGCTTCTCGACAAGGACGGGACATTCCTGAGCACACTGGAGCACTTTCTGAGCCGCTACCTGAAGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | GGACGGCTGTGTACGCCATGCCAAGGTATGCCCCAATaGACAATGCCAGCAGCAGGTCAAAGATGGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRLCTPCQGMPQ*TMPAAGQRWLA Trigger: AGCCAGCCATCTTTGACCTGCTGCTGGCATTGTGCATTGGGGCATACCTTGGCATGGCGTACACAGCCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 ENSMUST00000124437.2 |
||
| CDS GCA 72 bp | GGCTGGTTGGTGAGCCAGTCCATGACTGAGTCTATCTaGTCCTCCTGGACCATCTGCTCCGTGAACACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GWLVSQSMTESI*SSWTICSVNTG Trigger: GCCAGTGTTCACGGAGCAGATGGTCCAGGAGGAGCAGATAGACTCAGTCATGGACTGGCTCACCAACCAGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118498.8 |
||
| CDS CCA 72 bp | TATCTGCTCCTCCTGGACCATCTGCTCCGTGAACACTaGCATGTCTGGGGGCGTCCCCTTCTCTGTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: YLLLLDHLLREH*HVWGRPLLCQV Trigger: AACCTGACAGAGAAGGGGACGCCCCCAGACATGCCAGTGTTCACGGAGCAGATGGTCCAGGAGGAGCAGATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | CGGATGCGAAGAACAGGAGGTTGTACGCTGCATGTGTaGGCTTGTATGTGTAGAGGCGCGAGAAGAGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RMRRTGGCTLHV*ACMCRGARRGE Trigger: CTCGCCTCTTCTCGCGCCTCTACACATACAAGCGCACACATGCAGCGTACAACCTCCTGTTCTTCGCATCCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | TTTGGTGCCCTGGTAGTTGAACTTGCCCCCTCCGGATaGGAAGAACAGGAGGTTGTACGCTGCATGTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: FGALVVELAPSG*EEQEVVRCMCA Trigger: CGCACACATGCAGCGTACAACCTCCTGTTCTTCGCATCCGGAGGGGGCAAGTTCAACTACCAGGGCACCAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS GCA 72 bp | ATAGCACGTGGAAGTGCTGGACGGCTGTGTACGCCATaGCAAGGTATGCCCCAATGCACAATGCCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: IARGSAGRLCTP*QGMPQCTMPAA Trigger: TGCTGCTGGCATTGTGCATTGGGGCATACCTTGGCATGGCGTACACAGCCGTCCAGCACTTCCACGTGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 90 bp | CGCTCGTGTTCCCAGGCAAGCACGTCATCCGCTAGATTGATCTTCTaGTGTACCATGGAGAAGCTGACATCAGGGAACTGGTGCGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSCSQASTSSARLIF*CTMEKLTSGNWCAA Trigger: GGCTGCGCACCAGTTCCCTGATGTCAGCTTCTCCATGGTACACAAGAAGATCAATCTAGCGGATGACGTGCTTGCCTGGGAACACGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
||
| CDS CAA 90 bp | ATGGCAAAGCGCTCGTGTTCCCAGGCAAGCACGTCATCCGCTAGATaGATCTTCTTGTGTACCATGGAGAAGCTGACATCAGGGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: MAKRSCSQASTSSAR*IFLCTMEKLTSGNW Trigger: CCAGTTCCCTGATGTCAGCTTCTCCATGGTACACAAGAAGATCAATCTAGCGGATGACGTGCTTGCCTGGGAACACGAGCGCTTTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS CAA 72 bp | TCCCAGGCAAGCACGTCATCCGCTAGATTGATCTTCTaGTGTACCATGGAGAAGCTGACATCAGGGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: SQASTSSARLIF*CTMEKLTSGNW Trigger: CCAGTTCCCTGATGTCAGCTTCTCCATGGTACACAAGAAGATCAATCTAGCGGATGACGTGCTTGCCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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| CDS CAA 72 bp | CGCTCGTGTTCCCAGGCAAGCACGTCATCCGCTAGATaGATCTTCTTGTGTACCATGGAGAAGCTGACATCA | + |
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Preference number: 6 (lower is better) Translates to: RSCSQASTSSAR*IFLCTMEKLTS Trigger: TGATGTCAGCTTCTCCATGGTACACAAGAAGATCAATCTAGCGGATGACGTGCTTGCCTGGGAACACGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020463.14 ENSMUST00000118498.8 |
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