Pregenerated sensors for NCL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026234Ensembl transcript IDs: ENSMUST00000027438.8
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCAGGACAGCCAGGGCTACACAGAGAAACTTGGGGCTGGTGGATaGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCCC | + |
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Preference number: 1 (lower is better) Translates to: FQDSQGYTEKLGAGG*LSKGPEFKSQPPCP Trigger: GGGGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCCCAAGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR TCA 90 bp | CTACACAGAGAAACTTGGGGCTGGTGGATGGCTCAGCAAAGGTCCTaGGTTCAAATCCCAGCCACCATGCCCCAGATTTCATGGCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: LHRETWGWWMAQQRS*VQIPATMPQISWLR Trigger: CCTAAGCCATGAAATCTGGGGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCCCAAGTTTCTCTGTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR GCA 90 bp | GGACCTTGGGTCCCTGGAACTAGTTACAGTCAAGCAGCATCTGGATaGTGGGAAGTGAACTGGGGTTCTCTGCATGTAAACAGCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: GPWVPGTSYSQAASG*WEVNWGSLHVNSQC Trigger: ACACTGGCTGTTTACATGCAGAGAACCCCAGTTCACTTCCCAGCATCCAGATGCTGCTTGACTGTAACTAGTTCCAGGGACCCAAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR TCA 90 bp | GTGGTCTTTAAGATTTACCAGCGAGAACCTGATGACCAGGACCCCTaGAACCCAGATAAGGCCACTGAAATGGCATGCATTGCTAATCCC | + |
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Preference number: 1 (lower is better) Translates to: VVFKIYQREPDDQDP*NPDKATEMACIANP Trigger: GGGATTAGCAATGCATGCCATTTCAGTGGCCTTATCTGGGTTTCAGGGGTCCTGGTCATCAGGTTCTCGCTGGTAAATCTTAAAGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR GCA 90 bp | AAATCTAATGCCCACGCCATCCTCACTTTTAGACAGGACTGCGACTaGAATGGTCATACCACATACTCAAGCCACCAGACAGGTGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: KSNAHAILTFRQDCD*NGHTTYSSHQTGAK Trigger: CTTAGCACCTGTCTGGTGGCTTGAGTATGTGGTATGACCATTGCAGTCGCAGTCCTGTCTAAAAGTGAGGATGGCGTGGGCATTAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR TCA 90 bp | CACAGGCCAAGGGCCACTGTATTATCCCTAGTTAAACTGGACCTCTaGCAACCTTTAAGTCAAAAAGGCCACTGTTCCCTCTGTTGGAAC | + |
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Preference number: 1 (lower is better) Translates to: HRPRATVLSLVKLDL*QPLSQKGHCSLCWN Trigger: GTTCCAACAGAGGGAACAGTGGCCTTTTTGACTTAAAGGTTGTCAGAGGTCCAGTTTAACTAGGGATAATACAGTGGCCCTTGGCCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CCA 90 bp | TCCCATGGGATTGGATTACGTCACTCCCAGCTTGCTGCTGAGACTTaGTACTCAGTGGCTAAAACTCTGTATTTGGTTGTCTGTGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: SHGIGLRHSQLAAET*YSVAKTLYLVVCEV Trigger: AACCTCACAGACAACCAAATACAGAGTTTTAGCCACTGAGTACCAAGTCTCAGCAGCAAGCTGGGAGTGACGTAATCCAATCCCATGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR GCA 90 bp | GTGACCAGCTGCTTCAAGCTTCTGGCATCATGTCGTCCTTGTCCCTaGCATGATGGACTATATTCTGGAACTGTGAATCAAAATAAACCC | + |
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Preference number: 1 (lower is better) Translates to: VTSCFKLLASCRPCP*HDGLYSGTVNQNKP Trigger: GGGTTTATTTTGATTCACAGTTCCAGAATATAGTCCATCATGGCAGGGACAAGGACGACATGATGCCAGAAGCTTGAAGCAGCTGGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CCA 90 bp | GATAGAATAGAGACAAAAGATTATCAAAATTGCTTTACCAGGCGGTaGCGGCGCACACCTTTAATCCCAGCACTTGGGAGGCAGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: DRIETKDYQNCFTRR*RRTPLIPALGRQKQ Trigger: CTGTTTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCGCCACCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTCTATTCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CCA 90 bp | GCTAAGCGCAACCCTACAGAGGGTCTTTGGTTGAGAATAGCTGACTaGTCTTTCTTGAAAATCAGTTTGTTGGGAGTGGGACTTGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: AKRNPTEGLWLRIAD*SFLKISLLGVGLGK Trigger: TTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAAAGACCCTCTGTAGGGTTGCGCTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CCA 90 bp | GGAACTAGTTACAGTCAAGCAGCATCTGGATGCTGGGAAGTGAACTaGGGTTCTCTGCATGTAAACAGCCAGTGTTTAATCACTGAAACT | + |
|
Preference number: 1 (lower is better) Translates to: GTSYSQAASGCWEVN*GSLHVNSQCLITET Trigger: AGTTTCAGTGATTAAACACTGGCTGTTTACATGCAGAGAACCCCAGTTCACTTCCCAGCATCCAGATGCTGCTTGACTGTAACTAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR TCA 90 bp | AGCTACTCTACCACCAGAATAAGAGCTTTGTGTTTATCTATTAGGTaGAGGCAGATTAACTGCCTTCCCTCCACCCTTTCTTCAGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SYSTTRIRALCLSIR*RQINCLPSTLSSVL Trigger: GAGAACTGAAGAAAGGGTGGAGGGAAGGCAGTTAATCTGCCTTCACCTAATAGATAAACACAAAGCTCTTATTCTGGTGGTAGAGTAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR TCA 90 bp | TCCCACAAGCACACACAGGTTAAGTGGCCTATAAGTCCTCACTGTTaGGTATTTCTTGGAATCAGTTCCATCCTCTCCATCACTTATCAT | + |
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Preference number: 1 (lower is better) Translates to: SHKHTQVKWPISPHC*VFLGISSILSITYH Trigger: ATGATAAGTGATGGAGAGGATGGAACTGATTCCAAGAAATACTCAACAGTGAGGACTTATAGGCCACTTAACCTGTGTGTGCTTGTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR TCA 90 bp | ATCAAACACAGGCTGTCAGGTTTGGTGGCAGGCACCTTTACTAATTaGACTCACTGGCCCCCTTTACAGATATTTTTAACCAACAAATGC | + |
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Preference number: 1 (lower is better) Translates to: IKHRLSGLVAGTFTN*THWPPLQIFLTNKC Trigger: GCATTTGTTGGTTAAAAATATCTGTAAAGGGGGCCAGTGAGTTCAATTAGTAAAGGTGCCTGCCACCAAACCTGACAGCCTGTGTTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR GCA 90 bp | CCAGTAATCACATGGTGGCTCTCAATAATCTGTAATGGGATTCTATaGCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCATAT | + |
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Preference number: 1 (lower is better) Translates to: PVITWWLSIICNGIL*PLLVCLKTATVYSY Trigger: ATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATAGAATCCCATTACAGATTATTGAGAGCCACCATGTGATTACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CCA 90 bp | ATTTCATGGCTTAGGGTGAGTGTTTGTAGTTCAGCTAGTCCTTTCTaGAAATACTCACACACACACCCTAGAGTATGCCAAACCACATTG | + |
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Preference number: 1 (lower is better) Translates to: ISWLRVSVCSSASPF*KYSHTHPRVCQTTL Trigger: CAATGTGGTTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACTACAAACACTCACCCTAAGCCATGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR GCA 90 bp | AAGCTAGCTGAATACAAGCATCCATCAACTTTTTCTAACTATAGATaGAATGTGACCAGCTGCTTCAAGCTTCTGGCATCATGTCGTCCT | + |
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Preference number: 1 (lower is better) Translates to: KLAEYKHPSTFSNYR*NVTSCFKLLASCRP Trigger: AGGACGACATGATGCCAGAAGCTTGAAGCAGCTGGTCACATTGCATCTATAGTTAGAAAAAGTTGATGGATGCTTGTATTCAGCTAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CCA 90 bp | AGAATCATGATGAAGCTGTTCCCCACCAATTTCCACATTTGTAGCTaGGAATTCTTGAAAGCAGTAGGAACACAACTGAAATTCCCACTG | + |
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Preference number: 1 (lower is better) Translates to: RIMMKLFPTNFHICS*EFLKAVGTQLKFPL Trigger: CAGTGGGAATTTCAGTTGTGTTCCTACTGCTTTCAAGAATTCCCAGCTACAAATGTGGAAATTGGTGGGGAACAGCTTCATCATGATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR TCA 90 bp | AGTTTACCTTGTGGATGTGAATCATTCCGATGTTTAATTACTGTATaGGTGATATGCATGTTCAGGTACATGCTTGCTACAGAGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SLPCGCESFRCLITV*VICMFRYMLATERP Trigger: TGGCCTCTCTGTAGCAAGCATGTACCTGAACATGCATATCACTCATACAGTAATTAAACATCGGAATGATTCACATCCACAAGGTAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR GCA 90 bp | ATGTTTAATTACTGTATGAGTGATATGCATGTTCAGGTACATGCTTaGTACAGAGAGGCCAGACAAACCTATTGTTTCTCTCCTTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: MFNYCMSDMHVQVHA*YREARQTYCFSPSA Trigger: AGCTGAAGGAGAGAAACAATAGGTTTGTCTGGCCTCTCTGTAGCAAGCATGTACCTGAACATGCATATCACTCATACAGTAATTAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR TCA 90 bp | GAAATGGCATGCATTGCTAATCCCATTCGTATTGCCAGAAGTACTTaGAAGCTTGTAGTGAGTAAGAAAATAAGAGACCCTGCTTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: EMACIANPIRIARST*KLVVSKKIRDPASK Trigger: TTTTGAAGCAGGGTCTCTTATTTTCTTACTCACTACAAGCTTTCAAGTACTTCTGGCAATACGAATGGGATTAGCAATGCATGCCATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCTTCTATAATGGAGCCTaGCATGGTGGCACAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GLVDGSAKVLSSNPSHHAFYNGA*HGGTGL Trigger: AAGGCCTGTGCCACCATGTCAGGCTCCATTATAGAA...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCGAAAGGAAAGCTAGCTaGATACAAGCATCCATCAAC | + |
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Preference number: 2 (lower is better) Translates to: GLVDGSAKVLSSNPSHHAERKAS*IQASIN Trigger: GTTGATGGATGCTTGTATTCAGCTAGCTTTCCTTTC...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCTGCTTTAGCCTCCCATaGGATTGGATTACGTCACTC | + |
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Preference number: 2 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSCFSLP*DWITSL Trigger: GAGTGACGTAATCCAATCCCATGGGAGGCTAAAGCA...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCGAATTAGCACATGGCTaGCCTCTAAATATGGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: GLVDGSAKVLSSNPSHHAELAHG*PLNMGQ Trigger: TTGACCCATATTTAGAGGCCAGCCATGTGCTAATTC...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCAGACTTGGTACTCAGTaGCTAAAACTCTGTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: GLVDGSAKVLSSNPSHHARLGTQ*LKLCIW Trigger: CCAAATACAGAGTTTTAGCCACTGAGTACCAAGTCT...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCGGATCTTTACTGTCTTaGAATGTCCTTAGAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSGSLLS*NVLRRL Trigger: GAGCCTTCTAAGGACATTCCAAGACAGTAAAGATCC...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCAATTTTTCAACCCAATaGGGTACCATTCCTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSNFSTQ*GTIPCP Trigger: TGGACAAGGAATGGTACCCCATTGGGTTGAAAAATT...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACAACTGTTTGTAACATGGTGGGTCTGACTCCTCACACACATAAAGACCAAAGGCGGCTGGTGAGATaGCTCAGTAGTTCAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LTTVCNMVGLTPHTHKDQRRLVR*LSSSEH Trigger: GTGCTCTGAACTACTGAGCCATCTCACCAGCCGCCT...TTGGTCTTTATGTGTGTGAGGAGTCAGACCCACCATGTTACAAACAGTTGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CAA 90 bp | AGCCACCAGACAGGTGCTAAGCGCAACCCTACAGAGGGTCTTTGGTaGAGAATAGCTGACTGGTCTTTCTTGAAAATCAGTTTGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SHQTGAKRNPTEGLW*RIADWSFLKISLLG Trigger: TCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAAAGACCCTCTGTAGGGTTGCGCTTAGCACCTGTCTGGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAACAAGCAGCATCTGGATaGTGGGAAGTGAACTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SSASPFWKYSHTHPRVCQQAASG*WEVNWG Trigger: ACCCCAGTTCACTTCCCAGCATCCAGATGCTGCTTG...TTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAAAGATCCACCCTCTTCTaGCCTCCTGTGGCATTGCAT | + |
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Preference number: 2 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKRSTLF*PPVALH Trigger: ATGCAATGCCACAGGAGGCCAGAAGAGGGTGGATCT...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAATCACCTAATTATATGTACAAACCAAGGTCCTGGTCTAATTCCAAGCACCCTGGATGCTGGGAAGTaGACTGGGGTTCTCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: CNHLIICTNQGPGLIPSTLDAGK*TGVLCM Trigger: CATGCAGAGAACCCCAGTTCACTTCCCAGCATCCAG...GGTGCTTGGAATTAGACCAGGACCTTGGTTTGTACATATAATTAGGTGATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR CCA 90 bp | AGAATAGAGACAAAAGATTATCAAAATTGCTTTACCAGGCGGTGGCGGCGCACATGGAGCCTGACATGGTaGCACAGGCCTTTAATGCAA | + |
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Preference number: 2 (lower is better) Translates to: RIETKDYQNCFTRRWRRTWSLTW*HRPLMQ Trigger: TTGCATTAAAGGCCTGTGCCACCATGTCAGGCTCCA...TGTGCGCCGCCACCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTCTATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CAA 90 bp | GTCTTCTGTGTAGCACTGGCTATTCTGGAATTCCTTAGCCTCAAATaGGTCTGCCTTCTAGGATTAATGACAGCTGAGTGCCTTCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: VFCVALAILEFLSLK*VCLLGLMTAECLQL Trigger: TAGCTGAAGGCACTCAGCTGTCATTAATCCTAGAAGGCAGACCAATTTGAGGCTAAGGAATTCCAGAATAGCCAGTGCTACACAGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAAAGTAGTTCAGAGCACTaGCTGCTCTTTCAGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKSSSEH*LLFQRS Trigger: TGACCTCTGAAAGAGCAGTCAGTGCTCTGAACTACT...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAGGGCAGAGTTGGTCTTaGCAAGCTCTTAAGCAACAA | + |
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Preference number: 2 (lower is better) Translates to: SSASPFWKYSHTHPRVCQGQSWS*QALKQQ Trigger: TTGTTGCTTAAGAGCTTGGCAAGACCAACTCTGCCC...TTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CAA 90 bp | ATGAAGCTGTTCCCCACCAATTTCCACATTTGTAGCTGGGAATTCTaGAAAGCAGTAGGAACACAACTGAAATTCCCACTGGGCAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: MKLFPTNFHICSWEF*KAVGTQLKFPLGRV Trigger: AACTCTGCCCAGTGGGAATTTCAGTTGTGTTCCTACTGCTTTCAAGAATTCCCAGCTACAAATGTGGAAATTGGTGGGGAACAGCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAGAATGCCAGTACAAAATGTACTTGAATTAGCACATGGCTGGCCTCTAAATGATGACCAGGACCCCTaGAACCCAGATAAGGCCACT | + |
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Preference number: 2 (lower is better) Translates to: LRMPVQNVLELAHGWPLNDDQDP*NPDKAT Trigger: AGTGGCCTTATCTGGGTTTCAGGGGTCCTGGTCATC...ATTTAGAGGCCAGCCATGTGCTAATTCAAGTACATTTTGTACTGGCATTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAAACTATAGATGCAATGTaGCCAGCTGCTTCAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKTIDAM*PAASSF Trigger: GAAGCTTGAAGCAGCTGGTCACATTGCATCTATAGT...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CAA 90 bp | AACCCTACAGAGGGTCTTTGGTTGAGAATAGCTGACTGGTCTTTCTaGAAAATCAGTTTGTTGGGAGTGGGACTTGGAAAAACACCTACA | + |
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Preference number: 2 (lower is better) Translates to: NPTEGLWLRIADWSF*KISLLGVGLGKTPT Trigger: TGTAGGTGTTTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAAAGACCCTCTGTAGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAACTGACTGGTCTTTCTTaGAAATCAGTTTGTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKLTGLS*KSVCWE Trigger: CTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAG...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGGTTAACATAATCAAGGGCTCCACTCCCCACAGCAAAAGAACCCACCAATTGGTTGAGAATAGCTaGCTGGTCTTTCTTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KEVNIIKGSTPHSKRTHQLVENS*LVFLEN Trigger: ATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAA...TTGGTGGGTTCTTTTGCTGTGGGGAGTGGAGCCCTTGATTATGTTAACCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAAGAAGTAAAGAGTACATaGTCCTCTTCCATTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKEVKST*SSSISP Trigger: AGGGGAAATGGAAGAGGAGCATGTACTCTTTACTTC...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTTCAATTTGGTTGGCTCAAGAAAATACACAGCTGGTATTCTCAGGATAAACACTCAGAAATCCACCTaGCTGTCTCCCAAGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TFNLVGSRKYTAGILRINTQKST*LSPKCW Trigger: CCAGCACTTGGGAGACAGGCAGGTGGATTTCTGAGT...GTTTATCCTGAGAATACCAGCTGTGTATTTTCTTGAGCCAACCAAATTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR CAA 90 bp | TTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAACCACATaGTCAACTGAACTGGATCTAGAAGGAAATAGACACGCTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: FWKYSHTHPRVCQTT*STELDLEGNRHASK Trigger: CTTAGAAGCGTGTCTATTTCCTTCTAGATCCAGTTCAGTTGACAATGTGGTTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAATGTTCCTTAAGAGTTaGAAAGGTTCAGGCAGATTG | + |
|
Preference number: 2 (lower is better) Translates to: SSASPFWKYSHTHPRVCQMFLKS*KGSGRL Trigger: CAATCTGCCTGAACCTTTTCAACTCTTAAGGAACAT...TTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAATACACCCTTAGCATCTaGCTATGTTCCTTAAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKYTLSI*LCSLRV Trigger: AACTCTTAAGGAACATAGGCAGATGCTAAGGGTGTA...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAACCTTTAAGTCAAAAAGGCCACTGTTCCCTCTGTTGGAACTTACAAACCTTCTTGCTGCTGAGACTTaGTACTCAGTGGCTAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: TTFKSKRPLFPLLELTNLLAAET*YSVAKT Trigger: AGTTTTAGCCACTGAGTACCAAGTCTCAGCAGCAAG...AAGGTTTGTAAGTTCCAACAGAGGGAACAGTGGCCTTTTTGACTTAAAGGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCACAACTGTTTGTAACATGGTGGGTCTGACTCCTCACACACATAAAGACCAAGGCATTGCATGCACATaGAGAAATACAGACACTATA | + |
|
Preference number: 2 (lower is better) Translates to: LTTVCNMVGLTPHTHKDQGIACT*RNTDTI Trigger: TATAGTGTCTGTATTTCTCCATGTGCATGCAATGCC...TTGGTCTTTATGTGTGTGAGGAGTCAGACCCACCATGTTACAAACAGTTGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 90 bp | CCATCCTGGCTATGTGAATTTTTCAACCCAATGGGGTACCATTCCTaGTCCAGGTCATTTCAGATTGCACTGTACTGTTTGTTCTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: PSWLCEFFNPMGYHS*SRSFQIALYCLFLL Trigger: TAATAAGAACAAACAGTACAGTGCAATCTGAAATGACCTGGACAAGGAATGGTACCCCATTGGGTTGAAAAATTCACATAGCCAGGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 90 bp | GGTCTTTGGTTGAGAATAGCTGACTGGTCTTTCTTGAAAATCAGTTaGTTGGGAGTGGGACTTGGAAAAACACCTACAGGAAAGTTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: GLWLRIADWSFLKIS*LGVGLGKTPTGKFL Trigger: TAGAAACTTTCCTGTAGGTGTTTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAAAGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAAAGCTTCACTAAAGGGCCTAACAGAAGAATCAGTGAACTAGAATCCAAATCAGTTTGTTGGGAGTaGGACTTGGAAAAACACCTA | + |
|
Preference number: 2 (lower is better) Translates to: PESFTKGPNRRISELESKSVCWE*DLEKHL Trigger: TAGGTGTTTTTCCAAGTCCCACTCCCAACAAACTGA...TTTGGATTCTAGTTCACTGATTCTTCTGTTAGGCCCTTTAGTGAAGCTTTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTTTCTAAAATGTCTGCCTCGTTTAGGGAGAGCTATTCAACTGTAAATCTTTGGTATTTCCAGCACTaGTCCATGTGCTCTATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: CFSKMSASFRESYSTVNLWYFQH*SMCSIN Trigger: GTTGATAGAGCACATGGATCAGTGCTGGAAATACCA...AAGATTTACAGTTGAATAGCTCTCCCTAAACGAGGCAGACATTTTAGAAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAATCACCTAATTATATGTACAAACCAAGGTCCTGGTCTAATTCCAAGCACCAAGGTTCAGGCAGATTaGACTGAAAACTACATTAGG | + |
|
Preference number: 2 (lower is better) Translates to: CNHLIICTNQGPGLIPSTKVQAD*TENYIR Trigger: CCTAATGTAGTTTTCAGTTCAATCTGCCTGAACCTT...GGTGCTTGGAATTAGACCAGGACCTTGGTTTGTACATATAATTAGGTGATTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAAAGCTTCACTAAAGGGCCTAACAGAAGAATCAGTGAACTAGAATCCAAAATTGCCAGAAGTACTTaGAAGCTTGTAGTGAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: PESFTKGPNRRISELESKIARST*KLVVSK Trigger: CTTACTCACTACAAGCTTTCAAGTACTTCTGGCAAT...TTTGGATTCTAGTTCACTGATTCTTCTGTTAGGCCCTTTAGTGAAGCTTTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAATCACCTAATTATATGTACAAACCAAGGTCCTGGTCTAATTCCAAGCACCCATGTGCAACCATCCTaGCTATGTGAATTTTTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: CNHLIICTNQGPGLIPSTHVQPS*LCEFFN Trigger: GTTGAAAAATTCACATAGCCAGGATGGTTGCACATG...GGTGCTTGGAATTAGACCAGGACCTTGGTTTGTACATATAATTAGGTGATTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATAGAGACAAAAGATTATCAAAATTGCTTTACCAGGCGGTGGCGGCGCACATCCTCACTTTCAATTTaGTTGGCTCAAGAAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: RIETKDYQNCFTRRWRRTSSLSI*LAQENT Trigger: TGTATTTTCTTGAGCCAACCAAATTGAAAGTGAGGA...TGTGCGCCGCCACCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTCTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 90 bp | CTTTGGTTGAGAATAGCTGACTGGTCTTTCTTGAAAATCAGTTTGTaGGGAGTGGGACTTGGAAAAACACCTACAGGAAAGTTTCTATTA | + |
|
Preference number: 2 (lower is better) Translates to: LWLRIADWSFLKISL*GVGLGKTPTGKFLL Trigger: TAATAGAAACTTTCCTGTAGGTGTTTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAAGAATGCCAGTACAAAATGTACTTGAATTAGCACATGGCTGGCCTCTAAATTCTCATGTTGCCACCTaGTGGAAGAATGAGAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRMPVQNVLELAHGWPLNSHVAT*WKNEKR Trigger: TCTTTTCTCATTCTTCCAGCAGGTGGCAACATGAGA...ATTTAGAGGCCAGCCATGTGCTAATTCAAGTACATTTTGTACTGGCATTCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTCAATTTGGTTGGCTCAAGAAAATACACAGCTGGTATTCTCAGGATAAACCATGTTGCCACCTGCTaGAAGAATGAGAAAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TFNLVGSRKYTAGILRINHVATC*KNEKRK Trigger: CTTTCTTTTCTCATTCTTCCAGCAGGTGGCAACATG...GTTTATCCTGAGAATACCAGCTGTGTATTTTCTTGAGCCAACCAAATTGAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAATCACCTAATTATATGTACAAACCAAGGTCCTGGTCTAATTCCAAGCACCAGCCCTTTTATTCTATaGCAAAGGGTTTTACCACTA | + |
|
Preference number: 2 (lower is better) Translates to: CNHLIICTNQGPGLIPSTSPFIL*QRVLPL Trigger: TAGTGGTAAAACCCTTTGCCATAGAATAAAAGGGCT...GGTGCTTGGAATTAGACCAGGACCTTGGTTTGTACATATAATTAGGTGATTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTCAATTTGGTTGGCTCAAGAAAATACACAGCTGGTATTCTCAGGATAAACCCAGTAATCACATGGTaGCTCTCAATAATCTGTAAT | + |
|
Preference number: 2 (lower is better) Translates to: TFNLVGSRKYTAGILRINPVITW*LSIICN Trigger: ATTACAGATTATTGAGAGCCACCATGTGATTACTGG...GTTTATCCTGAGAATACCAGCTGTGTATTTTCTTGAGCCAACCAAATTGAAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | GCTGGCCTCGAACTCACTCAGAAAATCACTTGCCTCTaGCTCCCAAGTGCTGGGACTAAAGGCGTGCGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGLELTQKITCL*LPSAGTKGVRH Trigger: GTGGCGCACGCCTTTAGTCCCAGCACTTGGGAGGCAGAGGCAAGTGATTTTCTGAGTGAGTTCGAGGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | AGCCAGGGCTACACAGAGAAACTTGGGGCTGGTGGATaGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQGYTEKLGAGG*LSKGPEFKSQP Trigger: TGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCCCAAGTTTCTCTGTGTAGCCCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | GAAACTTGGGGCTGGTGGATGGCTCAGCAAAGGTCCTaGGTTCAAATCCCAGCCACCATGCCCCAGATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ETWGWWMAQQRS*VQIPATMPQIS Trigger: TGAAATCTGGGGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCCCAAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | GCCCACGCCATCCTCACTTTTAGACAGGACTGCGACTaGAATGGTCATACCACATACTCAAGCCACCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: AHAILTFRQDCD*NGHTTYSSHQT Trigger: TGTCTGGTGGCTTGAGTATGTGGTATGACCATTGCAGTCGCAGTCCTGTCTAAAAGTGAGGATGGCGTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | CCTGGCTGTCCTAGAACTCACTCTGTAGACCTAGGCTaGCCTCGAACTCACTCAGAAAATCACTTGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGCPRTHSVDLG*PRTHSENHLPL Trigger: CAGAGGCAAGTGATTTTCTGAGTGAGTTCGAGGCCAGCCTAGGTCTACAGAGTGAGTTCTAGGACAGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCCCACTGTTCCCTCTGTaGGAACTTACAAACCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSPLFPL*ELTNLV Trigger: AACAAGGTTTGTAAGTTCCAACAGAGGGAACAGTGG...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCTTGAAAATCAGTTTGTaGGGAGTGGGACTTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLVDGSAKVLSSNPSHHALKISL*GVGLGK Trigger: TTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAA...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | CCACTCTCTTTGATGCCAGCACTCAGAAGGCAGAGGTaGATGAACCTCTGGGAATTAAAGGCCAGCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLSLMPALRRQR*MNLWELKASWS Trigger: AGACCAGCTGGCCTTTAATTCCCAGAGGTTCATTCACCTCTGCCTTCTGAGTGCTGGCATCAAAGAGAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCATACCACACAAGCTCTaGTATGGTATTTCCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSIPHKL*YGISST Trigger: AGTGCTGGAAATACCATACAAGAGCTTGTGTGGTAT...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | AGCCTCTCCCTCCCAAGTGCTGGGGTTAAAGGCATGTaGAACCATCCTGGCTATGTGAATTTTTCAACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLPSAGVKGM*NHPGYVNFSTQ Trigger: TTGGGTTGAAAAATTCACATAGCCAGGATGGTTGCACATGCCTTTAACCCCAGCACTTGGGAGGGAGAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | GAGACAAAAGATTATCAAAATTGCTTTACCAGGCGGTaGCGGCGCACACCTTTAATCCCAGCACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ETKDYQNCFTRR*RRTPLIPALGR Trigger: CCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCGCCACCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | AAGATTTACCAGCGAGAACCTGATGACCAGGACCCCTaGAACCCAGATAAGGCCACTGAAATGGCATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: KIYQREPDDQDP*NPDKATEMACI Trigger: AATGCATGCCATTTCAGTGGCCTTATCTGGGTTTCAGGGGTCCTGGTCATCAGGTTCTCGCTGGTAAATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | CACCCAAGAAAGTGCCCAAAAAGCAGAAAAGGACCTTaGGTCCCTGGAACTAGTTACAGTCAAGCAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: HPRKCPKSRKGP*VPGTSYSQAAS Trigger: AGATGCTGCTTGACTGTAACTAGTTCCAGGGACCCAAGGTCCTTTTCTGCTTTTTGGGCACTTTCTTGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAAACGAATCCACTCTCTTaGATGCCAGCACTCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKTNPLS*MPALRR Trigger: CCTTCTGAGTGCTGGCATCAAAGAGAGTGGATTCGT...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | GTCACTCCCAGCTTGCTGCTGAGACTTGGTACTCAGTaGCTAAAACTCTGTATTTGGTTGTCTGTGAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VTPSLLLRLGTQ*LKLCIWLSVRF Trigger: AAACCTCACAGACAACCAAATACAGAGTTTTAGCCACTGAGTACCAAGTCTCAGCAGCAAGCTGGGAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | TACAGTCAAGCAGCATCTGGATGCTGGGAAGTGAACTaGGGTTCTCTGCATGTAAACAGCCAGTGTTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: YSQAASGCWEVN*GSLHVNSQCLI Trigger: GATTAAACACTGGCTGTTTACATGCAGAGAACCCCAGTTCACTTCCCAGCATCCAGATGCTGCTTGACTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCACAACTGTTTGTAACATGGTGGGTCTGACTCCTCACACACATAAAGACCAATCTTCAGTTCTCATGTaGCCACCTGCTGGAAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: LTTVCNMVGLTPHTHKDQSSVLM*PPAGRM Trigger: CATTCTTCCAGCAGGTGGCAACATGAGAACTGAAGA...TTGGTCTTTATGTGTGTGAGGAGTCAGACCCACCATGTTACAAACAGTTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCACAACTGTTTGTAACATGGTGGGTCTGACTCCTCACACACATAAAGACCAATGTGGTTGTACATACTaGCAGTCTCAGCACTTCGAG | + |
|
Preference number: 3 (lower is better) Translates to: LTTVCNMVGLTPHTHKDQCGCTY*QSQHFE Trigger: CTCGAAGTGCTGAGACTGCAAGTATGTACAACCACA...TTGGTCTTTATGTGTGTGAGGAGTCAGACCCACCATGTTACAAACAGTTGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | GCGCAACCCTACAGAGGGTCTTTGGTTGAGAATAGCTaGCTGGTCTTTCTTGAAAATCAGTTTGTTGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AQPYRGSLVENS*LVFLENQFVGS Trigger: ACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAAAGACCCTCTGTAGGGTTGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | CAGGCCTTTAATGCAACACTCAAGAGGCAGACATCTTaGGGTCAGCCTAGTCTACCTATTGAGTTCCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: QAFNATLKRQTS*GQPSLPIEFHD Trigger: ATCATGGAACTCAATAGGTAGACTAGGCTGACCTCAAGATGTCTGCCTCTTGAGTGTTGCATTAAAGGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | AGGCTGTCAGGTTTGGTGGCAGGCACCTTTACTAATTaGACTCACTGGCCCCCTTTACAGATATTTTTAACC | + |
|
Preference number: 3 (lower is better) Translates to: RLSGLVAGTFTN*THWPPLQIFLT Trigger: GGTTAAAAATATCTGTAAAGGGGGCCAGTGAGTTCAATTAGTAAAGGTGCCTGCCACCAAACCTGACAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | CTGGCTATTCTGGAATTCCTTAGCCTCAAATTGGTCTaGCTTCTAGGATTAATGACAGCTGAGTGCCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LAILEFLSLKLV*LLGLMTAECLQ Trigger: CTGAAGGCACTCAGCTGTCATTAATCCTAGAAGGCAGACCAATTTGAGGCTAAGGAATTCCAGAATAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | CCTCAGTATAGGGTCAAGACCTACACCCTTAGCATCTaGCTATGTTCCTTAAGAGTTGAAAAGGTTCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PQYRVKTYTLSI*LCSLRVEKVQA Trigger: TGCCTGAACCTTTTCAACTCTTAAGGAACATAGGCAGATGCTAAGGGTGTAGGTCTTGACCCTATACTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | ACATGGTGGCTCTCAATAATCTGTAATGGGATTCTATaGCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TWWLSIICNGIL*PLLVCLKTATV Trigger: CACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATAGAATCCCATTACAGATTATTGAGAGCCACCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | TGCTTCAAGCTTCTGGCATCATGTCGTCCTTGTCCCTaGCATGATGGACTATATTCTGGAACTGTGAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: CFKLLASCRPCP*HDGLYSGTVNQ Trigger: TTGATTCACAGTTCCAGAATATAGTCCATCATGGCAGGGACAAGGACGACATGATGCCAGAAGCTTGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | AACACAACTGAAATTCCCACTGGGCAGAGTTGGTCTTaGCAAGCTCTTAAGCAACAATCCAAATGTAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: NTTEIPTGQSWS*QALKQQSKCNL Trigger: GAGGTTACATTTGGATTGTTGCTTAAGAGCTTGGCAAGACCAACTCTGCCCAGTGGGAATTTCAGTTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATAGAGACAAAAGATTATCAAAATTGCTTTACCAGGCGGTGGCGGCGCACAGCTGACTGGTCTTTCTaGAAAATCAGTTTGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RIETKDYQNCFTRRWRRTADWSF*KISLLG Trigger: TCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGC...TGTGCGCCGCCACCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTCTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATAGAGACAAAAGATTATCAAAATTGCTTTACCAGGCGGTGGCGGCGCACAGTATGCCAAACCACATaGTCAACTGAACTGGATCTA | + |
|
Preference number: 3 (lower is better) Translates to: RIETKDYQNCFTRRWRRTVCQTT*STELDL Trigger: TAGATCCAGTTCAGTTGACAATGTGGTTTGGCATAC...TGTGCGCCGCCACCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTCTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | CATACCACACAAGCTCTTGTATGGTATTTCCAGCACTaGTCCATGTGCTCTATCAACCACTTTTCCAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: HTTQALVWYFQH*SMCSINHFSST Trigger: TGTACTGGAAAAGTGGTTGATAGAGCACATGGATCAGTGCTGGAAATACCATACAAGAGCTTGTGTGGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | ACCACCAGAATAAGAGCTTTGTGTTTATCTATTAGGTaGAGGCAGATTAACTGCCTTCCCTCCACCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TTRIRALCLSIR*RQINCLPSTLS Trigger: AGAAAGGGTGGAGGGAAGGCAGTTAATCTGCCTTCACCTAATAGATAAACACAAAGCTCTTATTCTGGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | CCTTTCTGGAAATACTCACACACACACCCTAGAGTATaGCAAACCACATTGTCAACTGAACTGGATCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PFWKYSHTHPRV*QTTLSTELDLE Trigger: TTCTAGATCCAGTTCAGTTGACAATGTGGTTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | CAACCTTTAAGTCAAAAAGGCCACTGTTCCCTCTGTTaGAACTTACAAACCTTGTTTCCCAAAGCTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: QPLSQKGHCSLC*NLQTLFPKASL Trigger: GAGAGAAGCTTTGGGAAACAAGGTTTGTAAGTTCCAACAGAGGGAACAGTGGCCTTTTTGACTTAAAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCAATCACCTAATTATATGTACAAACCAAGGTCCTGGTCTAATTCCAAGCACCCTGCTAGCACCAGAGTaGAACCTTTCCTTTGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: CNHLIICTNQGPGLIPSTLLAPE*NLSFAI Trigger: AATAGCAAAGGAAAGGTTCAACTCTGGTGCTAGCAG...GGTGCTTGGAATTAGACCAGGACCTTGGTTTGTACATATAATTAGGTGATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | GGGTTCTCTGCATGTAAACAGCCAGTGTTTAATCACTaGAACTCCTCACTTTCAATTTGGTTGGCTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GFSACKQPVFNH*NSSLSIWLAQE Trigger: TTCTTGAGCCAACCAAATTGAAAGTGAGGAGTTTCAGTGATTAAACACTGGCTGTTTACATGCAGAGAACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | TACTGTATGAGTGATATGCATGTTCAGGTACATGCTTaGTACAGAGAGGCCAGACAAACCTATTGTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: YCMSDMHVQVHA*YREARQTYCFS Trigger: AGAGAAACAATAGGTTTGTCTGGCCTCTCTGTAGCAAGCATGTACCTGAACATGCATATCACTCATACAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | ATGAAGCTGTTCCCCACCAATTTCCACATTTGTAGCTaGGAATTCTTGAAAGCAGTAGGAACACAACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MKLFPTNFHICS*EFLKAVGTQLK Trigger: TTTCAGTTGTGTTCCTACTGCTTTCAAGAATTCCCAGCTACAAATGTGGAAATTGGTGGGGAACAGCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR GCA 72 bp | AATGGGGTACCATTCCTTGTCCAGGTCATTTCAGATTaGACTGTACTGTTTGTTCTTATTATGCTGGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: NGVPFLVQVISD*TVLFVLIMLGI Trigger: TATTCCCAGCATAATAAGAACAAACAGTACAGTGCAATCTGAAATGACCTGGACAAGGAATGGTACCCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCAATTTGGTTGGCTCAAGAAAATACACAGCTGGTATTCTCAGGATAAACTGTAGCTGGGAATTCTaGAAAGCAGTAGGAACACAA | + |
|
Preference number: 3 (lower is better) Translates to: TFNLVGSRKYTAGILRINCSWEF*KAVGTQ Trigger: TTGTGTTCCTACTGCTTTCAAGAATTCCCAGCTACA...GTTTATCCTGAGAATACCAGCTGTGTATTTTCTTGAGCCAACCAAATTGAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTTCTAAAATGTCTGCCTCGTTTAGGGAGAGCTATTCAACTGTAAATCTTCCAGGTCATTTCAGATaGCACTGTACTGTTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CFSKMSASFRESYSTVNLPGHFR*HCTVCS Trigger: AGAACAAACAGTACAGTGCAATCTGAAATGACCTGG...AAGATTTACAGTTGAATAGCTCTCCCTAAACGAGGCAGACATTTTAGAAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | TGCATTGCTAATCCCATTCGTATTGCCAGAAGTACTTaGAAGCTTGTAGTGAGTAAGAAAATAAGAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: CIANPIRIARST*KLVVSKKIRDP Trigger: AGGGTCTCTTATTTTCTTACTCACTACAAGCTTTCAAGTACTTCTGGCAATACGAATGGGATTAGCAATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR TCA 72 bp | TGTGGATGTGAATCATTCCGATGTTTAATTACTGTATaGGTGATATGCATGTTCAGGTACATGCTTGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: CGCESFRCLITV*VICMFRYMLAT Trigger: TGTAGCAAGCATGTACCTGAACATGCATATCACTCATACAGTAATTAAACATCGGAATGATTCACATCCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CCA 72 bp | GTCTTTCTTGAAAATCAGTTTGTTGGGAGTGGGACTTaGAAAAACACCTACAGGAAAGTTTCTATTAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VFLENQFVGSGT*KNTYRKVSIKV Trigger: AACCTTAATAGAAACTTTCCTGTAGGTGTTTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCATCTTCCTCATCCTCTaGGGCAGGAGCAGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSIFLIL*GRSSRS Trigger: GCTCCTGCTGCTCCTGCCTCAGAGGATGAGGAAGAT...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCAGGAGCAGCAGGAGCTaGTTTTGCTGGCTTCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSRSSRS*FCWLHS Trigger: GGAGTGAAGCCAGCAAAAGCAGCTCCTGCTGCTCCT...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCAACCACCTTCTTTGCTaGGGTTGTGGTAGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVDGSAKVLSSNPSHHANHLLC*GCGSLF Trigger: AAAAAGGCTACCACAACCCCAGCAAAGAAGGTGGTT...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCCTTTTTACCAGGAGTTaGTACCAACGCTTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLVDGSAKVLSSNPSHHALFTRS*YQRFCL Trigger: CAAGCAAAAGCGTTGGTACCAACTCCTGGTAAAAAG...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAACTCTGCCTCCACCTCTaGCTCCGAAACCTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKLCLHL*LRNLLC Trigger: GCAGAGGAGGTTTCGGAGGCAGAGGTGGAGGCAGAG...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAACTCCGAAACCTCCTCTaGCTCCACCTCGACCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSASPFWKYSHTHPRVCQLRNLL*LHLDHQ Trigger: TTGGTGGTCGAGGTGGAGGCAGAGGAGGTTTCGGAG...TTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | GTTGGAAGATCCACCCTCTTCTGGCCTCCTGTGGCATaGCATGCACATGGAGAAATACAGACACTATACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGRSTLFWPPVA*HAHGEIQTLYP Trigger: TGGGTATAGTGTCTGTATTTCTCCATGTGCATGCAATGCCACAGGAGGCCAGAAGAGGGTGGATCTTCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGTTAACATAATCAAGGGCTCCACTCCCCACAGCAAAAGAACCCACCAATACTGCCTTTTTGCCTaGGGTCACAGCTGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KEVNIIKGSTPHSKRTHQYCLFA*GHSCFL Trigger: AAGAAAGCAGCTGTGACCCCAGGCAAAAAGGCAGTA...TTGGTGGGTTCTTTTGCTGTGGGGAGTGGAGCCCTTGATTATGTTAACCTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCAAACAGAGTTTTGGATaGTTGACTTCTCGAATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSKQSFG*LTSRIG Trigger: TCCAATTCGAGAAGTCAACCATCCAAAACTCTGTTT...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAAGCTGCTTTCTTAGCTaGTGTGGGAACTGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSASPFWKYSHTHPRVCQSCFLS*CGNCSL Trigger: AAGGCTGCAGTTCCCACACCAGCTAAGAAAGCAGCT...TTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | GCACCAGAGTTGAACCTTTCCTTTGCTATTGTAGTCTaGGGGGTCTTCTGTGTAGCACTGGCTATTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: APELNLSFAIVV*GVFCVALAILE Trigger: TTCCAGAATAGCCAGTGCTACACAGAAGACCCCCAAGACTACAATAGCAAAGGAAAGGTTCAACTCTGGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | AGAATAGAGACAAAAGATTATCAAAATTGCTTTACCAGGCGGTGGCGGCGCACATGGTACCAACGCTTTTaGTTGTGCAGCTCCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIETKDYQNCFTRRWRRTWYQRF*LCSSLL Trigger: AAGAAGGGAGCTGCACAAGCAAAAGCGTTGGTACCA...TGTGCGCCGCCACCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTCTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAAGCAGGAGCTGCTTTTaGTGGCTTCACTCCTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSASPFWKYSHTHPRVCQSRSCF*WLHSFY Trigger: GTAAAAGGAGTGAAGCCAGCAAAAGCAGCTCCTGCT...TTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | AGAATAGAGACAAAAGATTATCAAAATTGCTTTACCAGGCGGTGGCGGCGCACAGGGCTTCTTTCTGCTTaGTCATCTCCTTCTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RIETKDYQNCFTRRWRRTGLLSA*SSPSSV Trigger: AACGGAAGAAGGAGATGACCAAGCAGAAAGAAGCCC...TGTGCGCCGCCACCGCCTGGTAAAGCAATTTTGATAATCTTTTGTCTCTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | GTAGCACTGGCTATTCTGGAATTCCTTAGCCTCAAATaGGTCTGCCTTCTAGGATTAATGACAGCTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VALAILEFLSLK*VCLLGLMTAEC Trigger: GCACTCAGCTGTCATTAATCCTAGAAGGCAGACCAATTTGAGGCTAAGGAATTCCAGAATAGCCAGTGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTTTCTAAAATGTCTGCCTCGTTTAGGGAGAGCTATTCAACTGTAAATCTTCCTCACCGTGGGTTTTaGCAGCCTTTGCGAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CFSKMSASFRESYSTVNLPHRGF*QPLRAS Trigger: TGAAGCTCGCAAAGGCTGGCAAAACCCACGGTGAGG...AAGATTTACAGTTGAATAGCTCTCCCTAAACGAGGCAGACATTTTAGAAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAACTTCCGTTTTCCAGGTaGTGCTTTAACAGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSASPFWKYSHTHPRVCQLPFSR*CFNRFF Trigger: GAAGAACCTGTTAAAGCAGCACCTGGAAAACGGAAG...TTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | TACCACACAAGCTCTTGTATGGTATTTCCAGCACTGATCCATGTGCTCTATCAACACCACTCCAAGTGCTaGTCTTTCCAGTTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YHTSSCMVFPALIHVLYQHHSKC*SFQFSL Trigger: AAGAGAGAACTGGAAAGACCAGCACTTGGAGTGGTG...TTGATAGAGCACATGGATCAGTGCTGGAAATACCATACAAGAGCTTGTGTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | CCTGAAACCCAGATAAGGCCACTGAAATGGCATGCATaGCTAATCCCATTCGTATTGCCAGAAGTACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PETQIRPLKWHA*LIPFVLPEVLE Trigger: TTCAAGTACTTCTGGCAATACGAATGGGATTAGCAATGCATGCCATTTCAGTGGCCTTATCTGGGTTTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR TCA 90 bp | CTCACAACTGTTTGTAACATGGTGGGTCTGACTCCTCACACACATAAAGACCAAAGGTGTAGTTGGTTCTaGGCCTTCTACTTTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTTVCNMVGLTPHTHKDQRCSWF*AFYFLF Trigger: AAACAGAAAGTAGAAGGCTCAGAACCAACTACACCT...TTGGTCTTTATGTGTGTGAGGAGTCAGACCCACCATGTTACAAACAGTTGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR TCA 90 bp | ACAACCTTTAAGTCAAAAAGGCCACTGTTCCCTCTGTTGGAACTTACAAACCTTCAGTTTCCCGATCAGTaGCTATTCTTGCACGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TTFKSKRPLFPLLELTNLQFPDQ*LFLHEQ Trigger: CTGTTCGTGCAAGAATAGTCACTGATCGGGAAACTG...AAGGTTTGTAAGTTCCAACAGAGGGAACAGTGGCCTTTTTGACTTAAAGGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGGTTAACATAATCAAGGGCTCCACTCCCCACAGCAAAAGAACCCACCAATGGAATGACTTTGGCTaGTGTAATGTTTTTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEVNIIKGSTPHSKRTHQWNDFG*CNVFLS Trigger: GCTAAGAAAAACATTACACCAGCCAAAGTCATTCCA...TTGGTGGGTTCTTTTGCTGTGGGGAGTGGAGCCCTTGATTATGTTAACCTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | GAGGGTCTTTGGTTGAGAATAGCTGACTGGTCTTTCTaGAAAATCAGTTTGTTGGGAGTGGGACTTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EGLWLRIADWSF*KISLLGVGLGK Trigger: TTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAACCAAAGACCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | ACAACCTTTAAGTCAAAAAGGCCACTGTTCCCTCTGTaGGAACTTACAAACCTTGTTTCCCAAAGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTFKSKRPLFPL*ELTNLVSQSFS Trigger: AGAGAAGCTTTGGGAAACAAGGTTTGTAAGTTCCAACAGAGGGAACAGTGGCCTTTTTGACTTAAAGGTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | AGAATAGCTGACTGGTCTTTCTTGAAAATCAGTTTGTaGGGAGTGGGACTTGGAAAAACACCTACAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RIADWSFLKISL*GVGLGKTPTGK Trigger: CTTTCCTGTAGGTGTTTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | TTGAGAATAGCTGACTGGTCTTTCTTGAAAATCAGTTaGTTGGGAGTGGGACTTGGAAAAACACCTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRIADWSFLKIS*LGVGLGKTPTG Trigger: TCCTGTAGGTGTTTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGAATGCCAGTACAAAATGTACTTGAATTAGCACATGGCTGGCCTCTAAATCCGTTTTCCAGGTGCTaGTTTAACAGGTTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRMPVQNVLELAHGWPLNPFSRC*FNRFFL Trigger: GAGGAAGAACCTGTTAAAGCAGCACCTGGAAAACGG...ATTTAGAGGCCAGCCATGTGCTAATTCAAGTACATTTTGTACTGGCATTCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | ATAGCTGACTGGTCTTTCTTGAAAATCAGTTTGTTGGGAGTGGGACTTGGAAAACAAAACCAAACCCTTTaGAAGAACCAGTTTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: IADWSFLKISLLGVGLGKQNQTL*KNQFPD Trigger: ATCGGGAAACTGGTTCTTCCAAAGGGTTTGGTTTTG...TTTTCCAAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTTTCTAAAATGTCTGCCTCGTTTAGGGAGAGCTATTCAACTGTAAATCTTCCTCAGACAGACCTTTaGCAAACAGAGTTTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CFSKMSASFRESYSTVNLPQTDL*QTEFWM Trigger: CATCCAAAACTCTGTTTGTCAAAGGTCTGTCTGAGG...AAGATTTACAGTTGAATAGCTCTCCCTAAACGAGGCAGACATTTTAGAAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGAATGCCAGTACAAAATGTACTTGAATTAGCACATGGCTGGCCTCTAAATCTCGAATTGGATCCTTaGAACTCCAGCCTGATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRMPVQNVLELAHGWPLNLELDP*NSSLIV Trigger: AACAATCAGGCTGGAGTTGCAAGGATCCAATTCGAG...ATTTAGAGGCCAGCCATGTGCTAATTCAAGTACATTTTGTACTGGCATTCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| 3UTR CAA 72 bp | ATCAGGTTAACTTCTGGCTATGCCTATGAGATTATCTaGAATTACCTCAGGTATGTAAAACCATCCCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IRLTSGYAYEII*NYLRYVKPSLG Trigger: ACCTAGGGATGGTTTTACATACCTGAGGTAATTCAAGATAATCTCATAGGCATAGCCAGAAGTTAACCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAATTTGGTTGGCTCAAGAAAATACACAGCTGGTATTCTCAGGATAAACAATGTTTTTCTTAGCTaGTGTGGCTACTGCCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFNLVGSRKYTAGILRINNVFLS*CGYCLF Trigger: AAAAAGGCAGTAGCCACACCAGCTAAGAAAAACATT...GTTTATCCTGAGAATACCAGCTGTGTATTTTCTTGAGCCAACCAAATTGAAAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTTTCTAAAATGTCTGCCTCGTTTAGGGAGAGCTATTCAACTGTAAATCTTAGCAAATTCTATAAATaGATACCCTTTAGGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFSKMSASFRESYSTVNLSKFYK*IPFRFA Trigger: GGCAAACCTAAAGGGTATGCATTTATAGAATTTGCT...AAGATTTACAGTTGAATAGCTCTCCCTAAACGAGGCAGACATTTTAGAAAAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCTCTTCCATGGCCTCCTaGGCAGCTTTGGCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLVDGSAKVLSSNPSHHASSMAS*AALASS Trigger: GGAAGATGCCAAAGCTGCCAAGGAGGCCATGGAAGA...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCCTTCGTCTTCTTTCCTaGTGGCTTGAAGTCTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLVDGSAKVLSSNPSHHALRLLS*WLEVSP Trigger: GGGGGAGACTTCAAGCCACAAGGAAAGAAGACGAAG...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS GCA 90 bp | TGGAGTGGCAGCTCCCTTTTTACCAGGAGTTGGTACCAACGCTTTTaGTTGTGCAGCTCCCTTCTTACCCGGTGTTGGAATGACTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WSGSSLFTRSWYQRF*LCSSLLTRCWNDFG Trigger: GCCAAAGTCATTCCAACACCGGGTAAGAAGGGAGCTGCACAAGCAAAAGCGTTGGTACCAACTCCTGGTAAAAAGGGAGCTGCCACTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGTGGATGGCTCAGCAAAGGTCCTGAGTTCAAATCCCAGCCACCATGCCAGTTCTCTCTTGCCTTaGACCTTTCTCTCCAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: GLVDGSAKVLSSNPSHHASSLLP*TFLSSI Trigger: TATACTGGAGAGAAAGGTCAAAGGCAAGAGAGAACT...GGCATGGTGGCTGGGATTTGAACTCAGGACCTTTGCTGAGCCATCCACCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | TACCACACAAGCTCTTGTATGGTATTTCCAGCACTGATCCATGTGCTCTATCAAGCCTCACCGTGGGTTTaGCCAGCCTTTGCGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: YHTSSCMVFPALIHVLYQASPWV*PAFASF Trigger: GAAGCTCGCAAAGGCTGGCAAAACCCACGGTGAGGC...TTGATAGAGCACATGGATCAGTGCTGGAAATACCATACAAGAGCTTGTGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | AAGGGGCGACTTAAGGGCACTGGTCACTCTTCCAGGGGACCCAAGTTCAATTCCTCATCCTCAGTGATGTaGAAAGAGAGGTTTTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: KGRLKGTGHSSRGPKFNSSSSVM*KERFLA Trigger: AGCCAAAAACCTCTCTTTCAACATCACTGAGGATGA...GGAATTGAACTTGGGTCCCCTGGAAGAGTGACCAGTGCCCTTAAGTCGCCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS TCA 90 bp | ATCATCTTCCTCATCATCTTCATCCTCATCATCTTCCTCATCCTCTaGGGCAGGAGCAGCAGGAGCTGCTTTTGCTGGCTTCACTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: IIFLIIFILIIFLIL*GRSSRSCFCWLHSF Trigger: AAAGGAGTGAAGCCAGCAAAAGCAGCTCCTGCTGCTCCTGCCTCAGAGGATGAGGAAGATGATGAGGATGAAGATGATGAGGAAGATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CCA 90 bp | TGGTACCAACGCTTTTGCTTGTGCAGCTCCCTTCTTACCCGGTGTTaGAATGACTTTGGCTGGTGTAATGTTTTTCTTAGCTGGTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: WYQRFCLCSSLLTRC*NDFGWCNVFLSWCG Trigger: GCCACACCAGCTAAGAAAAACATTACACCAGCCAAAGTCATTCCAACACCGGGTAAGAAGGGAGCTGCACAAGCAAAAGCGTTGGTACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | CAGCTTGCTGCTGAGACTTGGTACTCAGTGGCTAAAACTCTGTATTTGGTTGTCGGGGCTTCTTTCTGCTaGGTCATCTCCTTCTTCCGT | + |
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Preference number: 5 (lower is better) Translates to: QLAAETWYSVAKTLYLVVGASFC*VISFFR Trigger: ACGGAAGAAGGAGATGACCAAGCAGAAAGAAGCCCC...GACAACCAAATACAGAGTTTTAGCCACTGAGTACCAAGTCTCAGCAGCAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAAATACCAACGCTTTTGCTaGTGCAGCTCCCTTCTTACC | + |
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Preference number: 5 (lower is better) Translates to: VQLVLSGNTHTHTLEYAKYQRFC*CSSLLT Trigger: GGTAAGAAGGGAGCTGCACAAGCAAAAGCGTTGGTA...TTTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | AAGGAGGTTAACATAATCAAGGGCTCCACTCCCCACAGCAAAAGAACCCACCAATCTACTTTCTGTTTCTaGGCTTCAGGGGCTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: KEVNIIKGSTPHSKRTHQSTFCF*ASGASF Trigger: GAAAGAAGCCCCTGAAGCCAAGAAACAGAAAGTAGA...TTGGTGGGTTCTTTTGCTGTGGGGAGTGGAGCCCTTGATTATGTTAACCTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | TACCACACAAGCTCTTGTATGGTATTTCCAGCACTGATCCATGTGCTCTATCAATTCTTTCCTTGTGGCTaGAAGTCTCCCCCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: YHTSSCMVFPALIHVLYQFFPCG*KSPPPP Trigger: AGGAGGAGGGGGAGACTTCAAGCCACAAGGAAAGAA...TTGATAGAGCACATGGATCAGTGCTGGAAATACCATACAAGAGCTTGTGTGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | TACCACACAAGCTCTTGTATGGTATTTCCAGCACTGATCCATGTGCTCTATCAACAGCAGGAGCTGCTTTaGCTGGCTTCACTCCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: YHTSSCMVFPALIHVLYQQQELL*LASLLL Trigger: TAAAAGGAGTGAAGCCAGCAAAAGCAGCTCCTGCTG...TTGATAGAGCACATGGATCAGTGCTGGAAATACCATACAAGAGCTTGTGTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | CCTGAAAGCTTCACTAAAGGGCCTAACAGAAGAATCAGTGAACTAGAATCCAAATCTCGAATTGGATCCTaGCAACTCCAGCCTGATTGT | + |
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Preference number: 5 (lower is better) Translates to: PESFTKGPNRRISELESKSRIGS*QLQPDC Trigger: ACAATCAGGCTGGAGTTGCAAGGATCCAATTCGAGA...TTTGGATTCTAGTTCACTGATTCTTCTGTTAGGCCCTTTAGTGAAGCTTTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS TCA 90 bp | AGTCTACAAAACCAAACCCTTTGGAAGAACCAGTTTCCCGATCAGTaGCTATTCTTGCACGAACAGAGCCCTCAAATGATTCTTTTAAGG | + |
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Preference number: 5 (lower is better) Translates to: SLQNQTLWKNQFPDQ*LFLHEQSPQMILLR Trigger: CCTTAAAAGAATCATTTGAGGGCTCTGTTCGTGCAAGAATAGTCACTGATCGGGAAACTGGTTCTTCCAAAGGGTTTGGTTTTGTAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | AGTTCAGCTAGTCCTTTCTGGAAATACTCACACACACACCCTAGAGTATGCCAATTGAAAGAGAGGTTTTaGGCTAGAAGTGTTCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: SSASPFWKYSHTHPRVCQLKERF*ARSVLA Trigger: TGCAAGAACACTTCTAGCCAAAAACCTCTCTTTCAA...TTGGCATACTCTAGGGTGTGTGTGTGAGTATTTCCAGAAAGGACTAGCTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | ACTTTCAATTTGGTTGGCTCAAGAAAATACACAGCTGGTATTCTCAGGATAAACCCTTTTTACCAGGAGTaGGTACCAACGCTTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: TFNLVGSRKYTAGILRINPFYQE*VPTLLL Trigger: AAGCAAAAGCGTTGGTACCAACTCCTGGTAAAAAGG...GTTTATCCTGAGAATACCAGCTGTGTATTTTCTTGAGCCAACCAAATTGAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | TTGAGAATAGCTGACTGGTCTTTCTTGAAAATCAGTTTGTTGGGAGTGGGACTTTTAAAACCAAAGTCTTaGATTCACCACTCCAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: LRIADWSFLKISLLGVGLLKPKS*IHHSKC Trigger: GCACTTGGAGTGGTGAATCAAAGACTTTGGTTTTAA...AAGTCCCACTCCCAACAAACTGATTTTCAAGAAAGACCAGTCAGCTATTCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | TTAAGAATGCCAGTACAAAATGTACTTGAATTAGCACATGGCTGGCCTCTAAATGAACTGCAGCCTTTTTaGTTTGTGAAACAACCACCT | + |
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Preference number: 5 (lower is better) Translates to: LRMPVQNVLELAHGWPLNELQPF*FVKQPP Trigger: AGGTGGTTGTTTCACAAACAAAAAAGGCTGCAGTTC...ATTTAGAGGCCAGCCATGTGCTAATTCAAGTACATTTTGTACTGGCATTCTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | ACTTTCAATTTGGTTGGCTCAAGAAAATACACAGCTGGTATTCTCAGGATAAACCAGTCCAAGGTAACTTaGTTTCCGTCAATTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: TFNLVGSRKYTAGILRINQSKVT*FPSISP Trigger: TGGAGAAATTGACGGAAACAAAGTTACCTTGGACTG...GTTTATCCTGAGAATACCAGCTGTGTATTTTCTTGAGCCAACCAAATTGAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS-3UTR CAA 90 bp | AAACTGCAATCACCTAATTATATGTACAAACCAAGGTCCTGGTCTAATTCCAAGTTTCCAATGAACAGATaGAAAGGTGTAGTTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: KLQSPNYMYKPRSWSNSKFPMNR*KGVVGS Trigger: AGAACCAACTACACCTTTCAATCTGTTCATTGGAAA...CTTGGAATTAGACCAGGACCTTGGTTTGTACATATAATTAGGTGATTGCAGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CCA 72 bp | CTTAGCTGGAGTGGCAGCTCCCTTTTTACCAGGAGTTaGTACCAACGCTTTTGCTTGTGCAGCTCCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSWSGSSLFTRS*YQRFCLCSSLL Trigger: AAGAAGGGAGCTGCACAAGCAAAAGCGTTGGTACCAACTCCTGGTAAAAAGGGAGCTGCCACTCCAGCTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CAA 90 bp | CATCATCTTCCTCATCCTCTGAGGCAGGAGCAGCAGGAGCTGCTTTaGCTGGCTTCACTCCTTTTACTATTGGTGGCTCAAACTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: HHLPHPLRQEQQELL*LASLLLLLVAQTHP Trigger: AGGATGAGTTTGAGCCACCAATAGTAAAAGGAGTGAAGCCAGCAAAAGCAGCTCCTGCTGCTCCTGCCTCAGAGGATGAGGAAGATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS GCA 72 bp | AGCTCCCTTTTTACCAGGAGTTGGTACCAACGCTTTTaGTTGTGCAGCTCCCTTCTTACCCGGTGTTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: SSLFTRSWYQRF*LCSSLLTRCWN Trigger: ATTCCAACACCGGGTAAGAAGGGAGCTGCACAAGCAAAAGCGTTGGTACCAACTCCTGGTAAAAAGGGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CAA 72 bp | TGTGCAGCTCCCTTCTTACCCGGTGTTGGAATGACTTaGGCTGGTGTAATGTTTTTCTTAGCTGGTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CAAPFLPGVGMT*AGVMFFLAGVA Trigger: AGCCACACCAGCTAAGAAAAACATTACACCAGCCAAAGTCATTCCAACACCGGGTAAGAAGGGAGCTGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CAA 72 bp | GGTGTAGTTGGTTCTGAGCCTTCTACTTTCTGTTTCTaGGCTTCAGGGGCTTCTTTCTGCTTGGTCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: GVVGSEPSTFCF*ASGASFCLVIS Trigger: GGAGATGACCAAGCAGAAAGAAGCCCCTGAAGCCAAGAAACAGAAAGTAGAAGGCTCAGAACCAACTACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CAA 90 bp | GCTTTTGCTTGTGCAGCTCCCTTCTTACCCGGTGTTGGAATGACTTaGGCTGGTGTAATGTTTTTCTTAGCTGGTGTGGCTACTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: AFACAAPFLPGVGMT*AGVMFFLAGVATAF Trigger: AAAGGCAGTAGCCACACCAGCTAAGAAAAACATTACACCAGCCAAAGTCATTCCAACACCGGGTAAGAAGGGAGCTGCACAAGCAAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CCA 72 bp | CGCTTTTGCTTGTGCAGCTCCCTTCTTACCCGGTGTTaGAATGACTTTGGCTGGTGTAATGTTTTTCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: RFCLCSSLLTRC*NDFGWCNVFLS Trigger: GCTAAGAAAAACATTACACCAGCCAAAGTCATTCCAACACCGGGTAAGAAGGGAGCTGCACAAGCAAAAGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CAA 90 bp | AGATTGAAAGGTGTAGTTGGTTCTGAGCCTTCTACTTTCTGTTTCTaGGCTTCAGGGGCTTCTTTCTGCTTGGTCATCTCCTTCTTCCGT | + |
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Preference number: 6 (lower is better) Translates to: RLKGVVGSEPSTFCF*ASGASFCLVISFFR Trigger: ACGGAAGAAGGAGATGACCAAGCAGAAAGAAGCCCCTGAAGCCAAGAAACAGAAAGTAGAAGGCTCAGAACCAACTACACCTTTCAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CCA 72 bp | AGGAGCTGCTTTTGCTGGCTTCACTCCTTTTACTATTaGTGGCTCAAACTCATCCTCTTCCTCATCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RSCFCWLHSFYY*WLKLILFLIIF Trigger: GAAGATGATGAGGAAGAGGATGAGTTTGAGCCACCAATAGTAAAAGGAGTGAAGCCAGCAAAAGCAGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS TCA 72 bp | AACCAAACCCTTTGGAAGAACCAGTTTCCCGATCAGTaGCTATTCTTGCACGAACAGAGCCCTCAAATGATT | + |
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Preference number: 6 (lower is better) Translates to: NQTLWKNQFPDQ*LFLHEQSPQMI Trigger: AATCATTTGAGGGCTCTGTTCGTGCAAGAATAGTCACTGATCGGGAAACTGGTTCTTCCAAAGGGTTTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CCA 72 bp | AGCTGCTTTTGCTGGCTTCACTCCTTTTACTATTGGTaGCTCAAACTCATCCTCTTCCTCATCATCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: SCFCWLHSFYYW*LKLILFLIIFI Trigger: GATGAAGATGATGAGGAAGAGGATGAGTTTGAGCCACCAATAGTAAAAGGAGTGAAGCCAGCAAAAGCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CAA 72 bp | ACAGACTTGTTTGGATTAAGGTTTCCAATGAACAGATaGAAAGGTGTAGTTGGTTCTGAGCCTTCTACTTTC | + |
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Preference number: 6 (lower is better) Translates to: TDLFGLRFPMNR*KGVVGSEPSTF Trigger: GAAAGTAGAAGGCTCAGAACCAACTACACCTTTCAATCTGTTCATTGGAAACCTTAATCCAAACAAGTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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| CDS CAA 90 bp | AACACTTCCTTTAATTCATCCTCAGTGATGTTGAAAGAGAGGTTTTaGGCTAGAAGTGTTCTTGCAGCTCGAACTTTCTTACTATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: NTSFNSSSVMLKERF*ARSVLAARTFLLSL Trigger: AAGAGATAGTAAGAAAGTTCGAGCTGCAAGAACACTTCTAGCCAAAAACCTCTCTTTCAACATCACTGAGGATGAATTAAAGGAAGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027438.8 |
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