Pregenerated sensors for NCKIPSD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032598Ensembl transcript IDs: ENSMUST00000035218.9, ENSMUST00000192678.2, ENSMUST00000194819.2, ENSMUST00000195323.2
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTaGCTGCCGCTGGGCCCTAGAGGAAGCACAGCAGGGAGGCCAGTC | + |
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Preference number: 1 (lower is better) Translates to: PKRERYLQVCPRVRG*LPLGPRGSTAGRPV Trigger: GACTGGCCTCCCTGCTGTGCTTCCTCTAGGGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 90 bp | AAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTaGCGCTGGGCCCTAGAGGAAGCACAGCAGGGAGGCCAGTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: KGKDTYRCVPGCVAA*RWALEEAQQGGQSG Trigger: ACCAGACTGGCCTCCCTGCTGTGCTTCCTCTAGGGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CCA 90 bp | GGTCAAGGACCATCACCTCTTTGGGCTGCAGATAGCAGTTTAAGCTaGAGCTGTGAGGTCCTGAGCCCCCGCCACCCTCCCCGTCGTCTC | + |
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Preference number: 1 (lower is better) Translates to: GQGPSPLWAADSSLS*SCEVLSPRHPPRRL Trigger: GAGACGACGGGGAGGGTGGCGGGGGCTCAGGACCTCACAGCTCCAGCTTAAACTGCTATCTGCAGCCCAAAGAGGTGATGGTCCTTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CCA 90 bp | GAAGCACAGCAGGGAGGCCAGTCTGGTCAAGGACCATCACCTCTTTaGGCTGCAGATAGCAGTTTAAGCTGGAGCTGTGAGGTCCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: EAQQGGQSGQGPSPL*AADSSLSWSCEVLS Trigger: GCTCAGGACCTCACAGCTCCAGCTTAAACTGCTATCTGCAGCCCAAAGAGGTGATGGTCCTTGACCAGACTGGCCTCCCTGCTGTGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 90 bp | ACAGCAGTCCCTATGGGGGAAGGGCTGCACATGAGCAACACTCACTaGAAAGCTAAGGCAAAGAACAGAGCTGGCAGAAGGTGCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: TAVPMGEGLHMSNTH*KAKAKNRAGRRCLP Trigger: AGGGAGGCACCTTCTGCCAGCTCTGTTCTTTGCCTTAGCTTTGCAGTGAGTGTTGCTCATGTGCAGCCCTTCCCCCATAGGGACTGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 90 bp | CGCTGTTCCAGGCTGTACTTGCCGCCATCTCGCATGGCTGTGTTGTaGACAGCCTCAATGGCACGGTCAATAGCTTGGAGGACATCTTGT | + |
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Preference number: 1 (lower is better) Translates to: RCSRLYLPPSRMAVL*TASMARSIAWRTSC Trigger: ACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACACAGCCATGCGAGATGGCGGCAAGTACAGCCTGGAACAGCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
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| 3UTR CCA 90 bp | CAAAGAACAGAGCTGGCAGAAGGTGCCTCCCTCACCCTAAGGACATaGCTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: QRTELAEGASLTLRT*LAEGQDSDQTAGRD Trigger: ATCCCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAGCCATGTCCTTAGGGTGAGGGAGGCACCTTCTGCCAGCTCTGTTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CCA 90 bp | GCTTTCTCAGCACCATCATCCTGTTCCATGGGGCTGCAGGACGGATaGCCTGTCTCTAGGATCCCACTTTCAAGGCAACAGTCTGGCCAA | + |
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Preference number: 1 (lower is better) Translates to: AFSAPSSCSMGLQDG*PVSRIPLSRQQSGQ Trigger: TTGGCCAGACTGTTGCCTTGAAAGTGGGATCCTAGAGACAGGCCATCCGTCCTGCAGCCCCATGGAACAGGATGATGGTGCTGAGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 90 bp | CAGCCTACCAGCAAACAGAGGGTATTCAGCCTTGCGCATTTCCTCTaGCCCAATACAGTTCCCAGACTGTGGTCCCCAATCCTACATCTG | + |
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Preference number: 1 (lower is better) Translates to: QPTSKQRVFSLAHFL*PNTVPRLWSPILHL Trigger: CAGATGTAGGATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTGAATACCCTCTGTTTGCTGGTAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 90 bp | TTCTATCATTGGCTTTCTCAGCACCATCATCCTGTTCCATGGGGCTaGAGGACGGATGGCCTGTCTCTAGGATCCCACTTTCAAGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: FYHWLSQHHHPVPWG*RTDGLSLGSHFQGN Trigger: GTTGCCTTGAAAGTGGGATCCTAGAGACAGGCCATCCGTCCTGCAGCCCCATGGAACAGGATGATGGTGCTGAGAAAGCCAATGATAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CCA 90 bp | AATAGATTCTATCATTGGCTTTCTCAGCACCATCATCCTGTTCCATaGGGCTGCAGGACGGATGGCCTGTCTCTAGGATCCCACTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: NRFYHWLSQHHHPVP*GCRTDGLSLGSHFQ Trigger: TTGAAAGTGGGATCCTAGAGACAGGCCATCCGTCCTGCAGCCCCATGGAACAGGATGATGGTGCTGAGAAAGCCAATGATAGAATCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGGGCCTTCAAGGCAACAGTCTaGCCAAGGCCTCTGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GKDTYRCVPGCVAACRWAFKATV*PRPLGL Trigger: CAGCCCCAGAGGCCTTGGCCAGACTGTTGCCTTGAA...GGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGGGCCCATCATCCTGTTCCATaGGGCTGCAGGACGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: GKDTYRCVPGCVAACRWAHHPVP*GCRTDG Trigger: GCCATCCGTCCTGCAGCCCCATGGAACAGGATGATG...GGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR CCA 90 bp | AAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGAGTGGGGGATGGGGGTaGCATGCTGAAGAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: KRERYLQVCPRVRGCLPLSGGWG*HAEEAA Trigger: GGCTGCCTCTTCAGCATGCCACCCCCATCCCCCACT...CAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGATGGCAGCAGCCCAGTATGCACATGGGAGTaGGGGATGGGGGTGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: LAEGQDSDQTAGRDGSSPVCTWE*GMGVAC Trigger: GCATGCCACCCCCATCCCCCACTCCCATGTGCATAC...TGGGCTGCTGCCATCCCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGGCACCCTCCCAGGGCTaGAGAGAAGGGAGTAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: KRERYLQVCPRVRGCLPLAPSQG*REGSKE Trigger: CTCTTTACTCCCTTCTCTGCAGCCCTGGGAGGGTGC...CAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CAA 90 bp | CCACGCTGTTCCAGGCTGTACTTGCCGCCATCTCGCATGGCTGTGTaGTGCACAGCCTCAATGGCACGGTCAATAGCTTGGAGGACATCT | + |
|
Preference number: 2 (lower is better) Translates to: PRCSRLYLPPSRMAV*CTASMARSIAWRTS Trigger: AGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACACAGCCATGCGAGATGGCGGCAAGTACAGCCTGGAACAGCGTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATTTAGAGCCAAGCCCCTaGGTTCTCTGCACCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: QPCAFPLPQYSSQTVVPNLEPSP*VLCTLP Trigger: TGGGAGGGTGCAGAGAACTCAGGGGCTTGGCTCTAA...ATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR TCA 90 bp | GAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTTTTAAGCTGGAGCTGTaGGGTCCTGAGCCCCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: EWNPKGKDTYRCVPGCVAFKLEL*GPEPPP Trigger: TGGCGGGGGCTCAGGACCTCACAGCTCCAGCTTAAA...AGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR GCA 90 bp | GCCCTAGAGGAAGCACAGCAGGGAGGCCAGTCTGGTCAAGGACCATCACCTCTTATGAGCAACACTCACTaGAAAGCTAAGGCAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: ALEEAQQGGQSGQGPSPLMSNTH*KAKAKN Trigger: GTTCTTTGCCTTAGCTTTGCAGTGAGTGTTGCTCAT...AAGAGGTGATGGTCCTTGACCAGACTGGCCTCCCTGCTGTGCTTCCTCTAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR CCA 90 bp | AAGATAAGAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCTCTGGGTATGCACATaGGAGTGGGGGATGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: KIRMEPKRERYLQVCPRVLWVCT*EWGMGV Trigger: CACCCCCATCCCCCACTCCCATGTGCATACCCAGAG...CACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCACCACAGTGGCCAAGAAGATAAGAATGGAACCCAAAAGGGAAAGATACCTGCAGGACTCTGGGTATaGACATGGGAGTGGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: VHHSGQEDKNGTQKGKIPAGLWV*TWEWGM Trigger: CATCCCCCACTCCCATGTGCATACCCAGAGTCCTGC...AGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTTCTTGGCCACTGTGGTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR CCA 90 bp | AAGATAAGAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCCCCAATCCTACATCTaGCCCCTTACCCTGACTCTC | + |
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Preference number: 2 (lower is better) Translates to: KIRMEPKRERYLQVCPRVPQSYI*PLTLTL Trigger: GAGAGTCAGGGTAAGGGGCCAGATGTAGGATTGGGG...CACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCTAGAGGAAGCACAGCAGGGAGGCCAGTCTGGTCAAGGACCATCACCTCTTAATAGATTCTATCATTaGCTTTCTCAGCACCATCAT | + |
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Preference number: 2 (lower is better) Translates to: ALEEAQQGGQSGQGPSPLNRFYH*LSQHHH Trigger: ATGATGGTGCTGAGAAAGCCAATGATAGAATCTATT...AAGAGGTGATGGTCCTTGACCAGACTGGCCTCCCTGCTGTGCTTCCTCTAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR-3UTR CCA 90 bp | AAGATAAGAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGACAGTTCCCAGACTGTaGTCCCCAATCCTACATCTG | + |
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Preference number: 2 (lower is better) Translates to: KIRMEPKRERYLQVCPRVTVPRL*SPILHL Trigger: CAGATGTAGGATTGGGGACCACAGTCTGGGAACTGT...CACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CCA 72 bp | TACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTaGGCCCTAGAGGAAGCACAGCAGGGAGGCCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: YRCVPGCVAACR*ALEEAQQGGQS Trigger: AGACTGGCCTCCCTGCTGTGCTTCCTCTAGGGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 72 bp | GAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTaGCTGCCGCTGGGCCCTAGAGGAAGCACAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: ERYLQVCPRVRG*LPLGPRGSTAG Trigger: CCCTGCTGTGCTTCCTCTAGGGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 72 bp | CCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTaGGTGGCTGCCTGCCGCTGGGCCCTAGAGGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: PKGKDTYRCVPG*VAACRWALEEA Trigger: TGCTTCCTCTAGGGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CCA 72 bp | CCATCACCTCTTTGGGCTGCAGATAGCAGTTTAAGCTaGAGCTGTGAGGTCCTGAGCCCCCGCCACCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PSPLWAADSSLS*SCEVLSPRHPP Trigger: GGGAGGGTGGCGGGGGCTCAGGACCTCACAGCTCCAGCTTAAACTGCTATCTGCAGCCCAAAGAGGTGATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 72 bp | AGGCTGTACTTGCCGCCATCTCGCATGGCTGTGTTGTaGACAGCCTCAATGGCACGGTCAATAGCTTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RLYLPPSRMAVL*TASMARSIAWR Trigger: CCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACACAGCCATGCGAGATGGCGGCAAGTACAGCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
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| 3UTR CCA 72 bp | GCACCATCATCCTGTTCCATGGGGCTGCAGGACGGATaGCCTGTCTCTAGGATCCCACTTTCAAGGCAACAG | + |
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Preference number: 3 (lower is better) Translates to: APSSCSMGLQDG*PVSRIPLSRQQ Trigger: CTGTTGCCTTGAAAGTGGGATCCTAGAGACAGGCCATCCGTCCTGCAGCCCCATGGAACAGGATGATGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR TCA 72 bp | AGGGGACAGCAGTCCCTATGGGGGAAGGGCTGCACATaGGCAACACTCACTGCAAAGCTAAGGCAAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: RGQQSLWGKGCT*ATLTAKLRQRT Trigger: TGTTCTTTGCCTTAGCTTTGCAGTGAGTGTTGCTCATGTGCAGCCCTTCCCCCATAGGGACTGCTGTCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 72 bp | GAGGCAGCCTACCAGCAAACAGAGGGTATTCAGCCTTaGGCATTTCCTCTGCCCCAATACAGTTCCCAGACT | + |
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Preference number: 3 (lower is better) Translates to: EAAYQQTEGIQP*AFPLPQYSSQT Trigger: AGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTGAATACCCTCTGTTTGCTGGTAGGCTGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CCA 72 bp | TATCATTGGCTTTCTCAGCACCATCATCCTGTTCCATaGGGCTGCAGGACGGATGGCCTGTCTCTAGGATCC | + |
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Preference number: 3 (lower is better) Translates to: YHWLSQHHHPVP*GCRTDGLSLGS Trigger: GGATCCTAGAGACAGGCCATCCGTCCTGCAGCCCCATGGAACAGGATGATGGTGCTGAGAAAGCCAATGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CCA 72 bp | GTGTTGTGCACAGCCTCAATGGCACGGTCAATAGCTTaGAGGACATCTTGTTCCATGCCCTGGGACTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VLCTASMARSIA*RTSCSMPWDSV Trigger: CACAGAGTCCCAGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
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| 3UTR GCA 72 bp | AGCAAACAGAGGGTATTCAGCCTTGCGCATTTCCTCTaGCCCAATACAGTTCCCAGACTGTGGTCCCCAATC | + |
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Preference number: 3 (lower is better) Translates to: SKQRVFSLAHFL*PNTVPRLWSPI Trigger: GATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTGAATACCCTCTGTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR GCA 72 bp | TCTGTCTCTGCCTCCCAGGTGCTGGCATTAAAGGTGTaGACCACAGTGGCCAAGAAGATAAGAATGGAACCC | + |
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Preference number: 3 (lower is better) Translates to: SVSASQVLALKV*TTVAKKIRMEP Trigger: GGGTTCCATTCTTATCTTCTTGGCCACTGTGGTGCACACCTTTAATGCCAGCACCTGGGAGGCAGAGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | ACCCTCCCCGTCGTCTCCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCAGGGGGCTCAGGGGATaGTGCCTTGGAGGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TLPVVSPHHHTGKPSSWCRGLRG*CLGGRG Trigger: CCCTCTCCCTCCAAGGCACCATCCCCTGAGCCCCCT...GCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGGAGACGACGGGGAGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR TCA 90 bp | GGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGGGCCGCTGGGGCTCATGTCTaGAGATACGCACAGGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: GKDTYRCVPGCVAACRWAAGAHV*RYAQGR Trigger: ACGACCCTGTGCGTATCTTCAGACATGAGCCCCAGC...GGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | GGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGGGCCGCAGCGTCCAAATGGTaGTCACTGGTGGATGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GKDTYRCVPGCVAACRWAAASKW*SLVDGV Trigger: GACCCCATCCACCAGTGACCACCATTTGGACGCTGC...GGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | AAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGTCGGCGCTTCACCGGTaGGGGTGGGGTGGTAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KRERYLQVCPRVRGCLPLSALHR*GWGGRS Trigger: GCTCCTACCACCCCACCCCCACCGGTGAAGCGCCGA...CAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR TCA 90 bp | GGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGGGCCCATCCTGCAGGAACTTaGGGACAGAGTGTGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GKDTYRCVPGCVAACRWAHPAGT*GQSVVA Trigger: AGCCACCACACTCTGTCCTCAAGTTCCTGCAGGATG...GGCCCAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | ACCCTCCCCGTCGTCTCCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGGCAGCTGCTCCGTaGTGTCCATTGGAAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TLPVVSPHHHTGKPSSWCLAAAP*CPLEGH Trigger: ATGGCCTTCCAATGGACACCACGGAGCAGCTGCCAG...GCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGGAGACGACGGGGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | GCCCTAGAGGAAGCACAGCAGGGAGGCCAGTCTGGTCAAGGACCATCACCTCTTACCAGTGCGTGCTGCTaGGCTCCAGCACCAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ALEEAQQGGQSGQGPSPLTSACC*APAPGR Trigger: CCTTCCTGGTGCTGGAGCGCAGCAGCACGCACTGGT...AAGAGGTGATGGTCCTTGACCAGACTGGCCTCCCTGCTGTGCTTCCTCTAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGGGAGAGGGCTGGGGCTaGGACACAGTAGTGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLGEGWG*DTVVWA Trigger: GGCCCACACTACTGTGTCCCAGCCCCAGCCCTCTCC...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR TCA 90 bp | GCCCTAGAGGAAGCACAGCAGGGAGGCCAGTCTGGTCAAGGACCATCACCTCTTGGGCTCAGGGCATCCTaGGCTTCCAAGTCATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ALEEAQQGGQSGQGPSPLGLRAS*ASKSSG Trigger: CCCTGATGACTTGGAAGCTCAGGATGCCCTGAGCCC...AAGAGGTGATGGTCCTTGACCAGACTGGCCTCCCTGCTGTGCTTCCTCTAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR TCA 90 bp | CTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGATGGCAGCAGCCCACATCTGGCACTGGGGTaGGGCCTCTTCCTCAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LAEGQDSDQTAGRDGSSPHLALG*GLFLSQ Trigger: CTGACTGAGGAAGAGGCCTCACCCCAGTGCCAGATG...TGGGCTGCTGCCATCCCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | CTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGATGGCAGCAGCCCACAGGAAGGTCTCGCCTaGAGCGAACGCCATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAEGQDSDQTAGRDGSSPQEGLA*SERHGV Trigger: AACGCCATGGCGTTCGCTGCAGGCGAGACCTTCCTG...TGGGCTGCTGCCATCCCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | GCTGTACTTGCCGCCATCTCGCATGGCTGTGTTGTGCACAGCCTCAATGGCACGCAGGAAGGTCTCGCCTaGAGCGAACGCCATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVLAAISHGCVVHSLNGTQEGLA*SERHGV Trigger: AACGCCATGGCGTTCGCTGCAGGCGAGACCTTCCTG...CGTGCCATTGAGGCTGTGCACAACACAGCCATGCGAGATGGCGGCAAGTACAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
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| CDS-3UTR GCA 90 bp | TGTACTTGCCGCCATCTCGCATGGCTGTGTTGTGCACAGCCTCAATGGCACGGTACCAGTGCGTGCTGCTaGGCTCCAGCACCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CTCRHLAWLCCAQPQWHGTSACC*APAPGR Trigger: CCTTCCTGGTGCTGGAGCGCAGCAGCACGCACTGGT...ACCGTGCCATTGAGGCTGTGCACAACACAGCCATGCGAGATGGCGGCAAGTACA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
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| CDS-3UTR GCA 90 bp | ACTCCACGCTGTTCCAGGCTGTACTTGCCGCCATCTCGCATGGCTGTGTTGTGCCTAACCACCAGTGCGTaGTGCTGCGCTCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TPRCSRLYLPPSRMAVLCLTTSA*CCAPAP Trigger: TGGTGCTGGAGCGCAGCAGCACGCACTGGTGGTTAG...GCACAACACAGCCATGCGAGATGGCGGCAAGTACAGCCTGGAACAGCGTGGAGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGGACGGATGGCCTGTCTCTAGGATCCCACTTTCAAGGCAACAGTCTGGCGCTGCTAACCACCAGTaGGTGCTGCTGCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQDGWPVSRIPLSRQQSGAANHQ*VLLRSS Trigger: GCTGGAGCGCAGCAGCACGCACTGGTGGTTAGCAGC...GCCAGACTGTTGCCTTGAAAGTGGGATCCTAGAGACAGGCCATCCGTCCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGGTGTGGGTGAGCAGCTaGGACCTAGCTCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLVWVSS*DLAQRG Trigger: GCCCCTCTGAGCTAGGTCCCAGCTGCTCACCCACAC...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | ACCCTAAGGACATGGCTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGTACCGGCGGGGGTGTaGGTGAGCAGCTGGGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: TLRTWLAEGQDSDQTAGRVPAGV*VSSWDL Trigger: TAGGTCCCAGCTGCTCACCCACACCCCCGCCGGTAC...CCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAGCCATGTCCTTAGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR TCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGTGTAGCCTGCAGGTCTaGCAGCCGATGTCGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLCSLQV*QPMSVL Trigger: CAGCACCGACATCGGCTGTCAGACCTGCAGGCTACA...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATTGGTCGTGGCAGACCTaGCCTGAGGGTAGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPCAFPLPQYSSQTVVPNWSWQT*PEGRAV Trigger: CACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCA...ATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGTTGGAGGGAGAGGGCTaGGGCTGGGACACAGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLLEGEG*GWDTVV Trigger: CACTACTGTGTCCCAGCCCCAGCCCTCTCCCTCCAA...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTCCCCGTCGTCTCCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCACAGAGTGTGGTGGCTaGGGCTCATGTCTGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TLPVVSPHHHTGKPSSWCTECGG*GSCLKI Trigger: TATCTTCAGACATGAGCCCCAGCCACCACACTCTGT...GCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGGAGACGACGGGGAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGCGGTCCATCTGGCACTaGGGTGAGGCCTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLRSIWH*GEASSS Trigger: TGAGGAAGAGGCCTCACCCCAGTGCCAGATGGACCG...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGACGGATGGCCTGTCTCTAGGATCCCACTTTCAAGGCAACAGTCTGGCTGGCACCGAAACACTTaGGGAGCAGCAGCCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQDGWPVSRIPLSRQQSGWHRNT*GAAAVE Trigger: CTCTACGGCTGCTGCTCCTCAAGTGTTTCGGTGCCA...GCCAGACTGTTGCCTTGAAAGTGGGATCCTAGAGACAGGCCATCCGTCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | GAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTACCACCAGTGCGTGCTaGTGCGCTCCAGCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EWNPKGKDTYRCVPGCVATTSAC*CAPAPG Trigger: TCCTGGTGCTGGAGCGCAGCAGCACGCACTGGTGGT...AGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | GGCACGGTCAATAGCTTGGAGGACATCTTGTTCCATGCCCTGGGACTCTGTGATGCTGCTAACCACCAGTaGGTGCTGCTGCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTVNSLEDILFHALGLCDAANHQ*VLLRSS Trigger: GCTGGAGCGCAGCAGCACGCACTGGTGGTTAGCAGC...ATCACAGAGTCCCAGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
||
| CDS-3UTR GCA 90 bp | GATGGGGGTGGCATGCTGAAGAGGCAGCCTACCAGCAAACAGAGGGTATTCAGCGTGTGTCCATGGAGGTaGTGCTGGCTGATGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DGGGMLKRQPTSKQRVFSVCPWR*CWLMSH Trigger: GTGGCTCATCAGCCAGCAGCACCTCCATGGACACAC...GCTGAATACCCTCTGTTTGCTGGTAGGCTGCCTCTTCAGCATGCCACCCCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | CCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGTAATTTATTTCTGCGTACAGCGCCCAGCTaGGCTGCTGGGCGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRIIIQGSPAPGACNLFLRTAPS*AAGRHP Trigger: AGGATGACGCCCAGCAGCGCAGCTGGGCGCTGTACG...CAGAAATAAATTACAGGCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGCACCCTGGTCTGCATGTCCCGTaGCAATTCCACAGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVSVQNILRAKPLSSLHPGLHVP*QFHRQH Trigger: GTGCTGCCTGTGGAATTGGCACGGGACATGCAGACC...AGGGTGCAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGCCATGGAGAAGACCATaGCCAGGACGAGGGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLPWRRP*PGRGQS Trigger: ACTCTGCCCTCGTCCTGGCCATGGTCTTCTCCATGG...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGCACCCTCTGTGTGGTAGAAGATaGCGGCTGTGGCAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVSVQNILRAKPLSSLHPLCGRR*RLWQSC Trigger: GCAGCTCTGCCACAGCCGCCATCTTCTACCACACAG...AGGGTGCAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | TTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATCCTACGCTGCAGGTAGGGCGTaGAGCGGACCACAGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRISSAPIQFPDCGPQSYAAGRA*SGPQHA Trigger: TGCATGCTGTGGTCCGCTCCACGCCCTACCTGCAGC...GTAGGATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | AAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGATCATACGGTCCATCTaGCACTGGGGTGAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRERYLQVCPRVRGCLPLIIRSI*HWGEAS Trigger: AGAGGCCTCACCCCAGTGCCAGATGGACCGTATGAT...CAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR TCA 90 bp | CATGCTGAAGAGGCAGCCTACCAGCAAACAGAGGGTATTCAGCCTTGCGCATTTCTGCTCCATGATAGGTaGGCTGGCTGGCACGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HAEEAAYQQTEGIQPCAFLLHDR*AGWHGG Trigger: GCCACCGTGCCAGCCAGCTCACCTATCATGGAGCAG...AAATGCGCAAGGCTGAATACCCTCTGTTTGCTGGTAGGCTGCCTCTTCAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR TCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGCTGTGGCAGAGCTGCTaGACACATCCTGCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLLWQSC*THPAGT Trigger: AGTTCCTGCAGGATGTGTTCAGCAGCTCTGCCACAG...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | CCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGTAATTTATTTCTGTGGGGTGGTAGGAGCTaGTCGTCGAGGCTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRIIIQGSPAPGACNLFLWGGRS*SSRLWW Trigger: CCACCACAGCCTCGACGAGCAGCTCCTACCACCCCA...CAGAAATAAATTACAGGCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | GCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGCACCCTAACTGTCTCAGCGGCTaGCTTCTCCTCTGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVSVQNILRAKPLSSLHPNCLSG*LLLCGL Trigger: GAGACCACAGAGGAGAAGGCAGCCGCTGAGACAGTT...AGGGTGCAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | CTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGATGGCAGCAGCCCACAAGATGCTCAGAACTaGGCAGGCTATGCTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAEGQDSDQTAGRDGSSPQDAQN*AGYAAV Trigger: AACGGCAGCATAGCCTGCCCAGTTCTGAGCATCTTG...TGGGCTGCTGCCATCCCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | AAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGCTAGCTCAGAGGGGCTaGAGCCAGTATAGAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRERYLQVCPRVRGCLPLLAQRG*SQYRVC Trigger: ACACACTCTATACTGGCTCCAGCCCCTCTGAGCTAG...CAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | TTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATCCTACCTCCTCTGTGGTCTCTaGGCTCAGGGCATCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRISSAPIQFPDCGPQSYLLCGL*AQGILS Trigger: GCTCAGGATGCCCTGAGCCCAGAGACCACAGAGGAG...GTAGGATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | TCTGGTCAAGGACCATCACCTCTTTGGGCTGCAGATAGCAGTTTAAGCTGGAGCAGCTGGCTGGCACGGTaGCCTGGATGTGACCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SGQGPSPLWAADSSLSWSSWLAR*PGCDPP Trigger: TGGTGGGTCACATCCAGGCCACCGTGCCAGCCAGCT...GCTCCAGCTTAAACTGCTATCTGCAGCCCAAAGAGGTGATGGTCCTTGACCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| 3UTR CAA 72 bp | TCCAGGCTGTACTTGCCGCCATCTCGCATGGCTGTGTaGTGCACAGCCTCAATGGCACGGTCAATAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLYLPPSRMAV*CTASMARSIAW Trigger: CCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACACAGCCATGCGAGATGGCGGCAAGTACAGCCTGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195323.2 |
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| CDS-3UTR TCA 90 bp | ACCCTAAGGACATGGCTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGCGTAGCACTGGAAGCTaGGGTGCCTCTTCGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLRTWLAEGQDSDQTAGRRSTGS*GASSRQ Trigger: TTGTCTCGAAGAGGCACCTCAGCTTCCAGTGCTACG...CCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAGCCATGTCCTTAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | CCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGTAATTTATTTCTGCTAACCACCAGTGCGTaGTGCTGCGCTCCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PRIIIQGSPAPGACNLFLLTTSA*CCAPAP Trigger: TGGTGCTGGAGCGCAGCAGCACGCACTGGTGGTTAG...CAGAAATAAATTACAGGCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCTTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATGGACATCTTGTTCCATaGCCTGCAGGCGATGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPCAFPLPQYSSQTVVPNGHLVP*PAGDAG Trigger: ACCTGCATCGCCTGCAGGGCATGGAACAAGATGTCC...ATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | ACCCTAAGGACATGGCTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGATCACTTCCAGTCTCTaGTGGTCGTGGCAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRTWLAEGQDSDQTAGRITSSL*WSWQTC Trigger: GCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGAT...CCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAGCCATGTCCTTAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | GAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTAGCTTCTGGTGGTCCTaGGTGTCGGTCTGCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EWNPKGKDTYRCVPGCVASFWWS*VSVCMS Trigger: GGACATGCAGACCGACACGCAGGACCACCAGAAGCT...AGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGGCCATGATGACATTCTaGTCAGGAGCTGTCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLAMMTF*SGAVRC Trigger: GCACCTGACAGCTCCTGAGCAGAATGTCATCATGGC...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | AAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCGTGGCTGCCTGCCGCTGCTGCTGAACACATCCTaGAGGAACTTGAGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRERYLQVCPRVRGCLPLLLNTS*RNLRTE Trigger: CTCTGTCCTCAAGTTCCTGCAGGATGTGTTCAGCAG...CAGCGGCAGGCAGCCACGCACCCTGGGACACACCTGTAGGTATCTTTCCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | ACCCTAAGGACATGGCTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGGGAGAGGTACTCCATaGGTAGCTTGTCTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLRTWLAEGQDSDQTAGRGRGTP*VACLQV Trigger: CACCTGGAGACAAGCTACGCATGGAGTACCTCTCCC...CCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAGCCATGTCCTTAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTAGAGGAAGCACAGCAGGGAGGCCAGTCTGGTCAAGGACCATCACCTCTTATGCTTAGTAGGAACTaGGCAAAGGGTGTACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALEEAQQGGQSGQGPSPLMLSRN*AKGVPR Trigger: CCTGGGTACACCCTTTGCCCAGTTCCTACTAAGCAT...AAGAGGTGATGGTCCTTGACCAGACTGGCCTCCCTGCTGTGCTTCCTCTAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCTTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATGAGGACAGAGTGTGGTaGCTGGGGCTCATGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPCAFPLPQYSSQTVVPNEDRVW*LGLMSE Trigger: TTCAGACATGAGCCCCAGCCACCACACTCTGTCCTC...ATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTAAGGACATGGCTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGCTTGAGGACAGAGTGTaGTGGCTGGGGCTCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRTWLAEGQDSDQTAGRLEDRV*WLGLMS Trigger: AGACATGAGCCCCAGCCACCACACTCTGTCCTCAAG...CCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAGCCATGTCCTTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | TCTGGTCAAGGACCATCACCTCTTTGGGCTGCAGATAGCAGTTTAAGCTGGAGCGTTCCAGGCTGTACTTaGCGCCATCTCGCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGQGPSPLWAADSSLSWSVPGCT*RHLAWL Trigger: CAGCCATGCGAGATGGCGGCAAGTACAGCCTGGAAC...GCTCCAGCTTAAACTGCTATCTGCAGCCCAAAGAGGTGATGGTCCTTGACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR GCA 90 bp | GTGCACCACAGTGGCCAAGAAGATAAGAATGGAACCCAAAAGGGAAAGATACCTGGGCTCAGGGGATGGTaGCTTGGAGGGAGAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHHSGQEDKNGTQKGKIPGLRGW*LGGRGL Trigger: CAGCCCTCTCCCTCCAAGGCACCATCCCCTGAGCCC...AGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTTCTTGGCCACTGTGGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGACCATCACCTCTTTGGGCTGCAGATAGCAGTTTAAGCTGGAGCTGTGAGTGCCGCCATCTCGCATaGCTGTGTTGTGCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGPSPLWAADSSLSWSCECRHLA*LCCAQP Trigger: AGGCTGTGCACAACACAGCCATGCGAGATGGCGGCA...CTCACAGCTCCAGCTTAAACTGCTATCTGCAGCCCAAAGAGGTGATGGTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTAAGGACATGGCTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGTGGTCACTGGTGGATaGGGTCATAACCGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TLRTWLAEGQDSDQTAGRVVTGG*GHNRST Trigger: AGTGCTACGGTTATGACCCCATCCACCAGTGACCAC...CCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAGCCATGTCCTTAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CCA 90 bp | AAGATAAGAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCAGGGGATGGTGCCTTaGAGGGAGAGGGCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIRMEPKRERYLQVCPRVQGMVP*RERAGA Trigger: AGCCCCAGCCCTCTCCCTCCAAGGCACCATCCCCTG...CACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | CATGCTGAAGAGGCAGCCTACCAGCAAACAGAGGGTATTCAGCCTTGCGCATTTGTACCGCCTCTCCCATaGAGAAGACCATGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HAEEAAYQQTEGIQPCAFVPPLP*RRPWPG Trigger: TCCTGGCCATGGTCTTCTCCATGGGAGAGGCGGTAC...AAATGCGCAAGGCTGAATACCCTCTGTTTGCTGGTAGGCTGCCTCTTCAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | TCTCCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGTAATTTATTTTGCCCCAATGGTCCTTaGCACAACTGTCTCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRIIIQGSPAPGACNLFCPNGP*HNCLSG Trigger: GCCGCTGAGACAGTTGTGCCAAGGACCATTGGGGCA...AAATAAATTACAGGCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR TCA 90 bp | TCTCCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGTAATTTATTTCTGTCAGGTGCAGGTTaGGAGCCAGAAGCAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRIIIQGSPAPGACNLFLSGAG*EPEAGS Trigger: TGAACCTGCTTCTGGCTCTCAACCTGCACCTGACAG...AAATAAATTACAGGCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGTCTTCGAGCCAGGTCTaGAAAAATCACTTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLAVSVQNILRAKPLSSLSSSQV*KNHFQS Trigger: AGACTGGAAGTGATTTTTGCAGACCTGGCTCGAAGA...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | CAGCCTTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATGCACGGTCAATAGCTTaGAGGACATCTTGTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QPCAFPLPQYSSQTVVPNARSIA*RTSCSM Trigger: CATGGAACAAGATGTCCTCCAAGCTATTGACCGTGC...ATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | TTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATCCTACTATAGAGTGTGTCCATaGAGGTGCTGCTGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRISSAPIQFPDCGPQSYYRVCP*RCCWLM Trigger: CATCAGCCAGCAGCACCTCCATGGACACACTCTATA...GTAGGATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | CATGCTGAAGAGGCAGCCTACCAGCAAACAGAGGGTATTCAGCCTTGCGCATTTGGCCATCCTCAACGATaGTTAGTAGGAACTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HAEEAAYQQTEGIQPCAFGHPQR*LVGTGQ Trigger: TTGCCCAGTTCCTACTAAGCATCGTTGAGGATGGCC...AAATGCGCAAGGCTGAATACCCTCTGTTTGCTGGTAGGCTGCCTCTTCAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | CTCAGGTCCCTTCTAATCTTTTATCACCTCGCAGTGTCGGTGCAGAACATCCTTCCAGAAGCAGGTTCATaGAGAGGTCTGGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSLLIFYHLAVSVQNILPEAGS*RGLAAA Trigger: AGCAGCTGCCAGACCTCTGCATGAACCTGCTTCTGG...AAGGATGTTCTGCACCGACACTGCGAGGTGATAAAAGATTAGAAGGGACCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | CTCAGGTCCCTTCTAATCTTTTATCACCTCGCAGTGTCGGTGCAGAACATCCTTACAGCAGCGTCCAAATaGTGGTCACTGGTGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSLLIFYHLAVSVQNILTAASK*WSLVDG Trigger: CCCATCCACCAGTGACCACCATTTGGACGCTGCTGT...AAGGATGTTCTGCACCGACACTGCGAGGTGATAAAAGATTAGAAGGGACCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | AAGATAAGAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGGAGTTCCATCAGCTCTaGCCCAATGGTCCTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KIRMEPKRERYLQVCPRVEFHQL*PNGPWH Trigger: GTGCCAAGGACCATTGGGGCAGAGCTGATGGAACTC...CACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR GCA 90 bp | AAGATAAGAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGAGCGAGAGGAGGACCTaGTCCATGATAGGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KIRMEPKRERYLQVCPRVSERRT*SMIGEL Trigger: CAGCTCACCTATCATGGAGCAGGTCCTCCTCTCGCT...CACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR TCA 90 bp | AAGATAAGAATGGAACCCAAAAGGGAAAGATACCTACAGGTGTGTCCCAGGGTGCAAGTCATCAGGGGTTaGGTTTGTCTCAGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KIRMEPKRERYLQVCPRVQVIRG*VCLSCH Trigger: GTGGCAGCTGAGACAAACTCAACCCCTGATGACTTG...CACCCTGGGACACACCTGTAGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CCA 90 bp | CCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGTAATTTATTTCTGAGAAGATCTTCACATTaGTGTGTCTGCTCAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRIIIQGSPAPGACNLFLRRSSH*CVCSRQ Trigger: CTGCCTTGAGCAGACACACCAATGTGAAGATCTTCT...CAGAAATAAATTACAGGCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 90 bp | GCAGGCGATGCAGGTAGGCAGGCGGCACGTACCCGGTCTCGCCACTaGGCGCCCGTGCTGCTAACCACCAGTGCGTGCTGCTGCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGDAGRQAARTRSRH*APVLLTTSACCCAP Trigger: TGGAGCGCAGCAGCACGCACTGGTGGTTAGCAGCACGGGCGCGCAGTGGCGAGACCGGGTACGTGCCGCCTGCCTACCTGCATCGCCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035218.9 ENSMUST00000195323.2 |
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| CDS GCA 90 bp | CGGTCTCGCCACTGCGCGCCCGTGCTGCTAACCACCAGTGCGTGCTaGTGCGCTCCAGCACCAGGAAGGTCTCGCCTGCAGCGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSRHCAPVLLTTSAC*CAPAPGRSRLQRTP Trigger: TGGCGTTCGCTGCAGGCGAGACCTTCCTGGTGCTGGAGCGCAGCAGCACGCACTGGTGGTTAGCAGCACGGGCGCGCAGTGGCGAGACCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035218.9 ENSMUST00000194819.2 ENSMUST00000195323.2 |
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| CDS GCA 90 bp | CCACCAGTGCGTGCTGCTGCGCTCCAGCACCAGGAAGGTCTCGCCTaGAGCGAACGCCATGGCGTTCGGCTCCGCGGAGCGGAACGCATA | + |
|
Preference number: 5 (lower is better) Translates to: PPVRAAALQHQEGLA*SERHGVRLRGAERI Trigger: TATGCGTTCCGCTCCGCGGAGCCGAACGCCATGGCGTTCGCTGCAGGCGAGACCTTCCTGGTGCTGGAGCGCAGCAGCACGCACTGGTGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035218.9 ENSMUST00000194819.2 ENSMUST00000195323.2 |
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| CDS GCA 90 bp | TCTCGCCACTGCGCGCCCGTGCTGCTAACCACCAGTGCGTGCTGCTaGGCTCCAGCACCAGGAAGGTCTCGCCTGCAGCGAACGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SRHCAPVLLTTSACC*APAPGRSRLQRTPW Trigger: CCATGGCGTTCGCTGCAGGCGAGACCTTCCTGGTGCTGGAGCGCAGCAGCACGCACTGGTGGTTAGCAGCACGGGCGCGCAGTGGCGAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035218.9 ENSMUST00000194819.2 ENSMUST00000195323.2 |
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| CDS CCA 90 bp | TGCTGCGCTCCAGCACCAGGAAGGTCTCGCCTGCAGCGAACGCCATaGCGTTCGGCTCCGCGGAGCGGAACGCATACAGCGCGCGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: CCAPAPGRSRLQRTP*RSAPRSGTHTARGT Trigger: TGTACCGCGCGCTGTATGCGTTCCGCTCCGCGGAGCCGAACGCCATGGCGTTCGCTGCAGGCGAGACCTTCCTGGTGCTGGAGCGCAGCA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035218.9 ENSMUST00000194819.2 ENSMUST00000195323.2 |
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| CDS TCA 90 bp | CACAGAACTACCTCCAGAGGGTATGGCTGTGCGGCCACCACTCCCTaGGATCACCAGGGCCTCACGGTCTCGGCGCTTCACCGGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HRTTSRGYGCAATTP*DHQGLTVSALHRWG Trigger: CCCCCACCGGTGAAGCGCCGAGACCGTGAGGCCCTGGTGATCTCAGGGAGTGGTGGCCGCACAGCCATACCCTCTGGAGGTAGTTCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS TCA 90 bp | GGCCTCTTCCTCAGTCAGGATGCGCCGCAGTGTAGCCTGCAGGTCTaGCAGCCGATGTCGGTGCTGCAGGTAGGGCGTGGAGCGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLFLSQDAPQCSLQV*QPMSVLQVGRGADH Trigger: GTGGTCCGCTCCACGCCCTACCTGCAGCACCGACATCGGCTGTCAGACCTGCAGGCTACACTGCGGCGCATCCTGACTGAGGAAGAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 90 bp | CTCACGGTCTCGGCGCTTCACCGGTGGGGGTGGGGTGGTAGGAGCTaGTCGTCGAGGCTGTGGTGGAACCTGGTAGAGGGCTCCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTVSALHRWGWGGRS*SSRLWWNLVEGSIC Trigger: ACAGATGGAGCCCTCTACCAGGTTCCACCACAGCCTCGACGAGCAGCTCCTACCACCCCACCCCCACCGGTGAAGCGCCGAGACCGTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 90 bp | CCAGTCTCTGCTGGTCGTGGCAGACCTGCCCTGAGGGTAGGGCTGTaGTCAGGTCCACTCCCTGAGATCACCAGGGCCTCACGGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PVSAGRGRPALRVGL*SGPLPEITRASRSR Trigger: CCGAGACCGTGAGGCCCTGGTGATCTCAGGGAGTGGACCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGCAGAGACTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192678.2 |
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| CDS TCA 90 bp | GTCCTTGCCTTCTACCAGCGAGAGGAGGACCTGCTCCATGATAGGTaGGCTGGCTGGCACGGTGGCCTGGATGTGACCCACCACGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLAFYQREEDLLHDR*AGWHGGLDVTHHDA Trigger: GGCGTCGTGGTGGGTCACATCCAGGCCACCGTGCCAGCCAGCTCACCTATCATGGAGCAGGTCCTCCTCTCGCTGGTAGAAGGCAAGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS TCA 90 bp | CTGCATCCGTCAGGATGTGCAGCAGTTCTTCCAGATAGCAGCGGATaGCGTCCTCGTCCTCGTACAGCGCCCAGCTGCGCTGCTGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LHPSGCAAVLPDSSG*RPRPRTAPSCAAGR Trigger: ACGCCCAGCAGCGCAGCTGGGCGCTGTACGAGGACGAGGACGTCATCCGCTGCTATCTGGAAGAACTGCTGCACATCCTGACGGATGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | CTTCACCGGTGGGGGTGGGGTGGTAGGAGCTGCTCGTCGAGGCTGTaGTGGAACCTGGTAGAGGGCTCCATCTGTCCCAAGATGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHRWGWGGRSCSSRL*WNLVEGSICPKMLR Trigger: TCTGAGCATCTTGGGACAGATGGAGCCCTCTACCAGGTTCCACCACAGCCTCGACGAGCAGCTCCTACCACCCCACCCCCACCGGTGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 90 bp | CGCCCAGCTGCGCTGCTGGGCGTCATCCTTTCTTCGAGCCAGGTCTaGAAAAATCACTTCCAGTCTCTGCTGGTCGTGGCAGACCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPAALLGVILSSSQV*KNHFQSLLVVADLP Trigger: GGGCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCTGGCTCGAAGAAAGGATGACGCCCAGCAGCGCAGCTGGGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | AGCTGGCTGGCACGGTGGCCTGGATGTGACCCACCACGACGCCGATaGCTACACGGCATAACTCATGGCTTAGACCGGTGTTTCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SWLARWPGCDPPRRR*LHGITHGLDRCFSA Trigger: TGCGGAGAAACACCGGTCTAAGCCATGAGTTATGCCGTGTAGCCATCGGCGTCGTGGTGGGTCACATCCAGGCCACCGTGCCAGCCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | CGCATGGCTGTGTTGTGCACAGCCTCAATGGCACGGTCAATAGCTTaGAGGACATCTTGTTCCATGCCCCGGTCTCGCCACTGCGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RMAVLCTASMARSIA*RTSCSMPRSRHCAP Trigger: GGGCGCGCAGTGGCGAGACCGGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACACAGCCATGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194819.2 |
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| CDS TCA 90 bp | ACCTGCTCCATGATAGGTGAGCTGGCTGGCACGGTGGCCTGGATGTaGCCCACCACGACGCCGATGGCTACACGGCATAACTCATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TCSMIGELAGTVAWM*PTTTPMATRHNSWL Trigger: AAGCCATGAGTTATGCCGTGTAGCCATCGGCGTCGTGGTGGGTCACATCCAGGCCACCGTGCCAGCCAGCTCACCTATCATGGAGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | CAGCGGATGACGTCCTCGTCCTCGTACAGCGCCCAGCTGCGCTGCTaGGCGTCATCCTTTCTTCGAGCCAGGTCTGCAAAAATCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRMTSSSSYSAQLRC*ASSFLRARSAKITS Trigger: GGAAGTGATTTTTGCAGACCTGGCTCGAAGAAAGGATGACGCCCAGCAGCGCAGCTGGGCGCTGTACGAGGACGAGGACGTCATCCGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | CTTCGAGCCAGGTCTGCAAAAATCACTTCCAGTCTCTGCTGGTCGTaGCAGACCTGCCCTGAGGGTAGGGCTGTGCTCAGGTCCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRARSAKITSSLCWS*QTCPEGRAVLRSTP Trigger: GGGAGTGGACCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCTGGCTCGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192678.2 |
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| CDS-3UTR CAA 90 bp | GCCCTAGAGGAAGCACAGCAGGGAGGCCAGTCTGGTCAAGGACCATCACCTCTTGCTGTGCTCAGGTCCTaGCCTTCTACCAGCGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALEEAQQGGQSGQGPSPLAVLRS*PSTSER Trigger: CCTCTCGCTGGTAGAAGGCAAGGACCTGAGCACAGC...AAGAGGTGATGGTCCTTGACCAGACTGGCCTCCCTGCTGTGCTTCCTCTAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | GGTGTTTCTCCGCACGAGTTCCATCAGCTCTGCCCCAATGGTCCTTaGCACAACTGTCTCAGCGGCTGCCTTCTCCTCTGTGGTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GVSPHEFHQLCPNGP*HNCLSGCLLLCGLW Trigger: CCAGAGACCACAGAGGAGAAGGCAGCCGCTGAGACAGTTGTGCCAAGGACCATTGGGGCAGAGCTGATGGAACTCGTGCGGAGAAACACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | CTTCGAGCCAGGTCTGCAAAAATCACTTCCAGTCTCTGCTGGTCGTaGCAGACCTGCCCTGAGGGTAGGGCTGTGCTCAGGTCCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRARSAKITSSLCWS*QTCPEGRAVLRSLP Trigger: AGGCAAGGACCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCTGGCTCGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | GTTCATAGTGTGCGTAGGGTACCGCCTCTCCCATGGAGAAGACCATaGCCAGGACGAGGGCAGAGTAACAGAGCTTCTGGTGGTCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VHSVRRVPPLPWRRP*PGRGQSNRASGGPA Trigger: CGCAGGACCACCAGAAGCTCTGTTACTCTGCCCTCGTCCTGGCCATGGTCTTCTCCATGGGAGAGGCGGTACCCTACGCACACTATGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | GGCAGAGCTGCTGAACACATCCTGCAGGAACTTGAGGACAGAGTGTaGTGGCTGGGGCTCATGTCTGAAGATACGCACAGGGTCGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRAAEHILQELEDRV*WLGLMSEDTHRVVP Trigger: GGGGACGACCCTGTGCGTATCTTCAGACATGAGCCCCAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGATGTGTTCAGCAGCTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CAA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGCTGCCCCAATGGTCCTaGGCACAACTGTCTCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HLAVSVQNILRAKPLSSLLPQWS*AQLSQR Trigger: CCGCTGAGACAGTTGTGCCAAGGACCATTGGGGCAG...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 90 bp | AGGTCTGCAAAAATCACTTCCAGTCTCTGCTGGTCGTGGCAGACCTaGCCTGAGGGTAGGGCTGTGCTCAGGTCCTTGCCTTCTACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSAKITSSLCWSWQT*PEGRAVLRSLPSTS Trigger: GCTGGTAGAAGGCAAGGACCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | TTAGACCGGTGTTTCTCCGCACGAGTTCCATCAGCTCTGCCCCAATaGTCCTTGGCACAACTGTCTCAGCGGCTGCCTTCTCCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LDRCFSARVPSALPQ*SLAQLSQRLPSPLW Trigger: CCACAGAGGAGAAGGCAGCCGCTGAGACAGTTGTGCCAAGGACCATTGGGGCAGAGCTGATGGAACTCGTGCGGAGAAACACCGGTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | TCCTTTCTTCGAGCCAGGTCTGCAAAAATCACTTCCAGTCTCTGCTaGTCGTGGCAGACCTGCCCTGAGGGTAGGGCTGTGCTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFLRARSAKITSSLC*SWQTCPEGRAVLRS Trigger: GGACCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCTGGCTCGAAGAAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035218.9 ENSMUST00000192678.2 |
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| CDS-3UTR CAA 90 bp | GATGGGGGTGGCATGCTGAAGAGGCAGCCTACCAGCAAACAGAGGGTATTCAGCGCTCCGTGGTGTCCATaGGAAGGCCATCCTCAACGA | + |
|
Preference number: 5 (lower is better) Translates to: DGGGMLKRQPTSKQRVFSAPWCP*EGHPQR Trigger: TCGTTGAGGATGGCCTTCCAATGGACACCACGGAGC...GCTGAATACCCTCTGTTTGCTGGTAGGCTGCCTCTTCAGCATGCCACCCCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS TCA 90 bp | CTTGTACATCTCTTGGACAATCATACGGTCCATCTGGCACTGGGGTaGGGCCTCTTCCTCAGTCAGGATGCGCCGCAGTGTAGCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVHLLDNHTVHLALG*GLFLSQDAPQCSLQ Trigger: CTGCAGGCTACACTGCGGCGCATCCTGACTGAGGAAGAGGCCTCACCCCAGTGCCAGATGGACCGTATGATTGTCCAAGAGATGTACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 90 bp | TCATCCTTTCTTCGAGCCAGGTCTGCAAAAATCACTTCCAGTCTCTaGTGGTCGTGGCAGACCTGCCCTGAGGGTAGGGCTGTGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFLRARSAKITSSL*WSWQTCPEGRAVLR Trigger: CCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCTGGCTCGAAGAAAGGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035218.9 ENSMUST00000192678.2 |
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| CDS GCA 90 bp | GTAACAGAGCTTCTGGTGGTCCTGCGTGTCGGTCTGCATGTCCCGTaGCAATTCCACAGGCAGCACGGAAGACACCAGAGTGGAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTELLVVLRVGLHVP*QFHRQHGRHQSGDD Trigger: ATCATCTCCACTCTGGTGTCTTCCGTGCTGCCTGTGGAATTGGCACGGGACATGCAGACCGACACGCAGGACCACCAGAAGCTCTGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | GTGGAACCTGGTAGAGGGCTCCATCTGTCCCAAGATGCTCAGAACTaGGCAGGCTATGCTGCCGTTCAAACCCAGTTCGACACACCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VEPGRGLHLSQDAQN*AGYAAVQTQFDTPH Trigger: ATGGGGTGTGTCGAACTGGGTTTGAACGGCAGCATAGCCTGCCCAGTTCTGAGCATCTTGGGACAGATGGAGCCCTCTACCAGGTTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | GTGTACCCAGGTGTTCATAGTGTGCGTAGGGTACCGCCTCTCCCATaGAGAAGACCATGGCCAGGACGAGGGCAGAGTAACAGAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VYPGVHSVRRVPPLP*RRPWPGRGQSNRAS Trigger: AGAAGCTCTGTTACTCTGCCCTCGTCCTGGCCATGGTCTTCTCCATGGGAGAGGCGGTACCCTACGCACACTATGAACACCTGGGTACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | CTGCTGAACACATCCTGCAGGAACTTGAGGACAGAGTGTGGTGGCTaGGGCTCATGTCTGAAGATACGCACAGGGTCGTCCCCTCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLNTSCRNLRTECGG*GSCLKIRTGSSPLF Trigger: GAACAGAGGGGACGACCCTGTGCGTATCTTCAGACATGAGCCCCAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGATGTGTTCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CCA 90 bp | AGAGCTGCTGAACACATCCTGCAGGAACTTGAGGACAGAGTGTGGTaGCTGGGGCTCATGTCTGAAGATACGCACAGGGTCGTCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAAEHILQELEDRVW*LGLMSEDTHRVVPS Trigger: AGAGGGGACGACCCTGTGCGTATCTTCAGACATGAGCCCCAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGATGTGTTCAGCAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CAA 90 bp | CACCTCGCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGTCTCGCATGGCTGTGTaGTGCACAGCCTCAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLAVSVQNILRAKPLSSLSRMAV*CTASMA Trigger: TGCCATTGAGGCTGTGCACAACACAGCCATGCGAGA...CAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGACGGATGGCCTGTCTCTAGGATCCCACTTTCAAGGCAACAGTCTGGCCATCAGGGGTTGAGTTaGTCTCAGCTGCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQDGWPVSRIPLSRQQSGHQGLS*SQLPPP Trigger: AGGAGGTGGCAGCTGAGACAAACTCAACCCCTGATG...GCCAGACTGTTGCCTTGAAAGTGGGATCCTAGAGACAGGCCATCCGTCCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGGACGGATGGCCTGTCTCTAGGATCCCACTTTCAAGGCAACAGTCTGGCCGCTCGGTGTTCCATTaGGTAATAGGCCACCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQDGWPVSRIPLSRQQSGRSVFH*VIGHQG Trigger: GCCTTGGTGGCCTATTACCAAATGGAACACCGAGCG...GCCAGACTGTTGCCTTGAAAGTGGGATCCTAGAGACAGGCCATCCGTCCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CAA 90 bp | GATGGGGGTGGCATGCTGAAGAGGCAGCCTACCAGCAAACAGAGGGTATTCAGCACATCCTGCAGGAACTaGAGGACAGAGTGTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DGGGMLKRQPTSKQRVFSTSCRN*RTECGG Trigger: GCCACCACACTCTGTCCTCAAGTTCCTGCAGGATGT...GCTGAATACCCTCTGTTTGCTGGTAGGCTGCCTCTTCAGCATGCCACCCCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 90 bp | AGGGCTCCATCTGTCCCAAGATGCTCAGAACTGGGCAGGCTATGCTaGCGTTCAAACCCAGTTCGACACACCCCATTGGGCTGTCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RAPSVPRCSELGRLC*RSNPVRHTPLGCLD Trigger: ATCTAGACAGCCCAATGGGGTGTGTCGAACTGGGTTTGAACGGCAGCATAGCCTGCCCAGTTCTGAGCATCTTGGGACAGATGGAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS GCA 90 bp | TGCAGGTTGAGAGCCAGAAGCAGGTTCATGCAGAGGTCTGGCAGCTaGTCCGTGGTGTCCATTGGAAGGCCATCCTCAACGATGCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: CRLRARSRFMQRSGS*SVVSIGRPSSTMLS Trigger: ACTAAGCATCGTTGAGGATGGCCTTCCAATGGACACCACGGAGCAGCTGCCAGACCTCTGCATGAACCTGCTTCTGGCTCTCAACCTGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 90 bp | CGACACACCCCATTGGGCTGTCTAGATACAGCAGCGTCCAAATGGTaGTCACTGGTGGATGGGGTCATAACCGTAGCACTGGAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHTPLGCLDTAASKW*SLVDGVITVALEAE Trigger: CTCAGCTTCCAGTGCTACGGTTATGACCCCATCCACCAGTGACCACCATTTGGACGCTGCTGTATCTAGACAGCCCAATGGGGTGTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CCA 90 bp | TCCGGGAATTCCTTGTACATCTCTTGGACAATCATACGGTCCATCTaGCACTGGGGTGAGGCCTCTTCCTCAGTCAGGATGCGCCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SGNSLYISWTIIRSI*HWGEASSSVRMRRS Trigger: ACTGCGGCGCATCCTGACTGAGGAAGAGGCCTCACCCCAGTGCCAGATGGACCGTATGATTGTCCAAGAGATGTACAAGGAATTCCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS-3UTR CAA 90 bp | GCAGTGTCGGTGCAGAACATCCTTAGAGCCAAGCCCCTGAGTTCTCTGCACCCTGTTCGACACACCCCATaGGGCTGTCTAGATACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AVSVQNILRAKPLSSLHPVRHTP*GCLDTA Trigger: TGCTGTATCTAGACAGCCCAATGGGGTGTGTCGAAC...AGGGTGCAGAGAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS GCA 90 bp | CTGGCAGCTGCTCCGTGGTGTCCATTGGAAGGCCATCCTCAACGATaGTTAGTAGGAACTGGGCAAAGGGTGTACCCAGGTGTTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAAAPWCPLEGHPQR*LVGTGQRVYPGVHS Trigger: ACTATGAACACCTGGGTACACCCTTTGCCCAGTTCCTACTAAGCATCGTTGAGGATGGCCTTCCAATGGACACCACGGAGCAGCTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CCA 90 bp | GTTCGACACACCCCATTGGGCTGTCTAGATACAGCAGCGTCCAAATaGTGGTCACTGGTGGATGGGGTCATAACCGTAGCACTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRHTPLGCLDTAASK*WSLVDGVITVALEA Trigger: AGCTTCCAGTGCTACGGTTATGACCCCATCCACCAGTGACCACCATTTGGACGCTGCTGTATCTAGACAGCCCAATGGGGTGTGTCGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CCA 90 bp | AATTCCTTGTACATCTCTTGGACAATCATACGGTCCATCTGGCACTaGGGTGAGGCCTCTTCCTCAGTCAGGATGCGCCGCAGTGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSLYISWTIIRSIWH*GEASSSVRMRRSVA Trigger: GGCTACACTGCGGCGCATCCTGACTGAGGAAGAGGCCTCACCCCAGTGCCAGATGGACCGTATGATTGTCCAAGAGATGTACAAGGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CAA 90 bp | CTTGCTGAGGGTCAAGACTCAGACCAGACAGCAGGTAGGGATGGCAGCAGCCCAAGGTCCGGGAATTCCTaGTACATCTCTTGGACAATC | + |
|
Preference number: 5 (lower is better) Translates to: LAEGQDSDQTAGRDGSSPRSGNS*YISWTI Trigger: GATTGTCCAAGAGATGTACAAGGAATTCCCGGACCT...TGGGCTGCTGCCATCCCTACCTGCTGTCTGGTCTGAGTCTTGACCCTCAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGTAATTTATTTAGCTTGGAGGACATCTaGTTCCATGCCCTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPRIIIQGSPAPGACNLFSLEDI*FHALQA Trigger: CGCCTGCAGGGCATGGAACAAGATGTCCTCCAAGCT...AAATAAATTACAGGCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS TCA 90 bp | ATGGTGGTCACTGGTGGATGGGGTCATAACCGTAGCACTGGAAGCTaGGGTGCCTCTTCGAGACAAGGTTTCTTTCCGGTGATGGATAAG | + |
|
Preference number: 5 (lower is better) Translates to: MVVTGGWGHNRSTGS*GASSRQGFFPVMDK Trigger: CTTATCCATCACCGGAAAGAAACCTTGTCTCGAAGAGGCACCTCAGCTTCCAGTGCTACGGTTATGACCCCATCCACCAGTGACCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CAA 90 bp | TCTCCCCGCATCATCATACAGGGAAGCCCAGCTCCTGGTGCCTGTAATTTATTTGGCACGGTCAATAGCTaGGAGGACATCTTGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPRIIIQGSPAPGACNLFGTVNS*EDILFH Trigger: ATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCC...AAATAAATTACAGGCACCAGGAGCTGGGCTTCCCTGTATGATGATGCGGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCTTGCGCATTTCCTCTGCCCCAATACAGTTCCCAGACTGTGGTCCCCAATCTTTTGCACATTTTCTaGCAAACTTCGGGATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QPCAFPLPQYSSQTVVPNLLHIF*QTSGSA Trigger: TGCAGATCCCGAAGTTTGCAAGAAAATGTGCAAAAG...ATTGGGGACCACAGTCTGGGAACTGTATTGGGGCAGAGGAAATGCGCAAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS-3UTR CAA 90 bp | GTGCACCACAGTGGCCAAGAAGATAAGAATGGAACCCAAAAGGGAAAGATACCTATGGCACCGAAACACTaGAGGAGCAGCAGCCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VHHSGQEDKNGTQKGKIPMAPKH*RSSSRR Trigger: TCTACGGCTGCTGCTCCTCAAGTGTTTCGGTGCCAT...AGGTATCTTTCCCTTTTGGGTTCCATTCTTATCTTCTTGGCCACTGTGGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS GCA 72 bp | GCAGGTAGGCAGGCGGCACGTACCCGGTCTCGCCACTaGGCGCCCGTGCTGCTAACCACCAGTGCGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRQAARTRSRH*APVLLTTSACC Trigger: GCAGCACGCACTGGTGGTTAGCAGCACGGGCGCGCAGTGGCGAGACCGGGTACGTGCCGCCTGCCTACCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035218.9 ENSMUST00000195323.2 |
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| CDS CCA 72 bp | CAGGGCCTCACGGTCTCGGCGCTTCACCGGTGGGGGTaGGGTGGTAGGAGCTGCTCGTCGAGGCTGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGLTVSALHRWG*GGRSCSSRLWW Trigger: CCACCACAGCCTCGACGAGCAGCTCCTACCACCCCACCCCCACCGGTGAAGCGCCGAGACCGTGAGGCCCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | GATCACCAGGGCCTCACGGTCTCGGCGCTTCACCGGTaGGGGTGGGGTGGTAGGAGCTGCTCGTCGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DHQGLTVSALHR*GWGGRSCSSRL Trigger: CAGCCTCGACGAGCAGCTCCTACCACCCCACCCCCACCGGTGAAGCGCCGAGACCGTGAGGCCCTGGTGATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | TGCGCGCCCGTGCTGCTAACCACCAGTGCGTGCTGCTaGGCTCCAGCACCAGGAAGGTCTCGCCTGCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: CAPVLLTTSACC*APAPGRSRLQR Trigger: TCGCTGCAGGCGAGACCTTCCTGGTGCTGGAGCGCAGCAGCACGCACTGGTGGTTAGCAGCACGGGCGCGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035218.9 ENSMUST00000194819.2 ENSMUST00000195323.2 |
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| CDS GCA 72 bp | CACTGCGCGCCCGTGCTGCTAACCACCAGTGCGTGCTaGTGCGCTCCAGCACCAGGAAGGTCTCGCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HCAPVLLTTSAC*CAPAPGRSRLQ Trigger: CTGCAGGCGAGACCTTCCTGGTGCTGGAGCGCAGCAGCACGCACTGGTGGTTAGCAGCACGGGCGCGCAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035218.9 ENSMUST00000194819.2 ENSMUST00000195323.2 |
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| CDS CCA 72 bp | CCAGCACCAGGAAGGTCTCGCCTGCAGCGAACGCCATaGCGTTCGGCTCCGCGGAGCGGAACGCATACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PAPGRSRLQRTP*RSAPRSGTHTA Trigger: CGCTGTATGCGTTCCGCTCCGCGGAGCCGAACGCCATGGCGTTCGCTGCAGGCGAGACCTTCCTGGTGCTGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035218.9 ENSMUST00000194819.2 ENSMUST00000195323.2 |
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| CDS CCA 72 bp | CTCGGCGAGGTACCGGCGGGGGTGTGGGTGAGCAGCTaGGACCTAGCTCAGAGGGGCTGGAGCCAGTATAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGEVPAGVWVSS*DLAQRGWSQYR Trigger: TCTATACTGGCTCCAGCCCCTCTGAGCTAGGTCCCAGCTGCTCACCCACACCCCCGCCGGTACCTCGCCGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | TGGAGGACATCTTGTTCCATGCCCCGGTCTCGCCACTaGGCGCCCGTGCTGCTAACCACCAGTGCGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WRTSCSMPRSRH*APVLLTTSACC Trigger: GCAGCACGCACTGGTGGTTAGCAGCACGGGCGCGCAGTGGCGAGACCGGGGCATGGAACAAGATGTCCTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194819.2 |
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| CDS GCA 72 bp | GCTGGTCGTGGCAGACCTGCCCTGAGGGTAGGGCTGTaGTCAGGTCCACTCCCTGAGATCACCAGGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGRGRPALRVGL*SGPLPEITRAS Trigger: TGAGGCCCTGGTGATCTCAGGGAGTGGACCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192678.2 |
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| CDS TCA 72 bp | CTCAGTCAGGATGCGCCGCAGTGTAGCCTGCAGGTCTaGCAGCCGATGTCGGTGCTGCAGGTAGGGCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSQDAPQCSLQV*QPMSVLQVGRG Trigger: TCCACGCCCTACCTGCAGCACCGACATCGGCTGTCAGACCTGCAGGCTACACTGCGGCGCATCCTGACTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | GCTGGTCGTGGCAGACCTGCCCTGAGGGTAGGGCTGTaGTCAGGTCCTTGCCTTCTACCAGCGAGAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGRGRPALRVGL*SGPCLLPARGG Trigger: TCCTCCTCTCGCTGGTAGAAGGCAAGGACCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | TGGGGGTGGGGTGGTAGGAGCTGCTCGTCGAGGCTGTaGTGGAACCTGGTAGAGGGCTCCATCTGTCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WGWGGRSCSSRL*WNLVEGSICPK Trigger: CTTGGGACAGATGGAGCCCTCTACCAGGTTCCACCACAGCCTCGACGAGCAGCTCCTACCACCCCACCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | CTCAGGTCCTTGCCTTCTACCAGCGAGAGGAGGACCTaGTCCATGATAGGTGAGCTGGCTGGCACGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRSLPSTSERRT*SMIGELAGTVA Trigger: GGCCACCGTGCCAGCCAGCTCACCTATCATGGAGCAGGTCCTCCTCTCGCTGGTAGAAGGCAAGGACCTGAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | ATGACGTCCTCGTCCTCGTACAGCGCCCAGCTGCGCTaGTGGGCGTCATCCTTTCTTCGAGCCAGGTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MTSSSSYSAQLR*WASSFLRARSA Trigger: TGCAGACCTGGCTCGAAGAAAGGATGACGCCCAGCAGCGCAGCTGGGCGCTGTACGAGGACGAGGACGTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | GGTCTGACAGCCGATGTCGGTGCTGCAGGTAGGGCGTaGAGCGGACCACAGCATGCATCAGGGAGAGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GLTADVGAAGRA*SGPQHASGRGT Trigger: AGTACCTCTCCCTGATGCATGCTGTGGTCCGCTCCACGCCCTACCTGCAGCACCGACATCGGCTGTCAGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS TCA 72 bp | ATGATAGGTGAGCTGGCTGGCACGGTGGCCTGGATGTaGCCCACCACGACGCCGATGGCTACACGGCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: MIGELAGTVAWM*PTTTPMATRHN Trigger: GTTATGCCGTGTAGCCATCGGCGTCGTGGTGGGTCACATCCAGGCCACCGTGCCAGCCAGCTCACCTATCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CCA 72 bp | GCACGGTGGCCTGGATGTGACCCACCACGACGCCGATaGCTACACGGCATAACTCATGGCTTAGACCGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ARWPGCDPPRRR*LHGITHGLDRC Trigger: ACACCGGTCTAAGCCATGAGTTATGCCGTGTAGCCATCGGCGTCGTGGTGGGTCACATCCAGGCCACCGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | ACGTCCTCGTCCTCGTACAGCGCCCAGCTGCGCTGCTaGGCGTCATCCTTTCTTCGAGCCAGGTCTGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TSSSSYSAQLRC*ASSFLRARSAK Trigger: TTTTGCAGACCTGGCTCGAAGAAAGGATGACGCCCAGCAGCGCAGCTGGGCGCTGTACGAGGACGAGGACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CAA 72 bp | AGCCTCAATGGCACGGTCAATAGCTTGGAGGACATCTaGTTCCATGCCCCGGTCTCGCCACTGCGCGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SLNGTVNSLEDI*FHAPVSPLRAR Trigger: ACGGGCGCGCAGTGGCGAGACCGGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194819.2 |
||
| CDS CAA 90 bp | GTTGTGCACAGCCTCAATGGCACGGTCAATAGCTTGGAGGACATCTaGTTCCATGCCCCGGTCTCGCCACTGCGCGCCCGTGCTGCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: VVHSLNGTVNSLEDI*FHAPVSPLRARAAN Trigger: GTTAGCAGCACGGGCGCGCAGTGGCGAGACCGGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194819.2 |
||
| CDS CAA 90 bp | TCGCATGGCTGTGTTGTGCACAGCCTCAATGGCACGGTCAATAGCTaGGAGGACATCTTGTTCCATGCCCCGGTCTCGCCACTGCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHGCVVHSLNGTVNS*EDILFHAPVSPLRA Trigger: GGCGCGCAGTGGCGAGACCGGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACACAGCCATGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194819.2 |
||
| CDS TCA 72 bp | GCTCAGGGCATCCTGAGCTTCCAAGTCATCAGGGGTTaGGTTTGTCTCAGCTGCCACCTCCTCCGTAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AQGILSFQVIRG*VCLSCHLLRRG Trigger: CCCCCTACGGAGGAGGTGGCAGCTGAGACAAACTCAACCCCTGATGACTTGGAAGCTCAGGATGCCCTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS TCA 72 bp | TCAGGATGTGCAGCAGTTCTTCCAGATAGCAGCGGATaGCGTCCTCGTCCTCGTACAGCGCCCAGCTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGCAAVLPDSSG*RPRPRTAPSCA Trigger: AGCGCAGCTGGGCGCTGTACGAGGACGAGGACGTCATCCGCTGCTATCTGGAAGAACTGCTGCACATCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS GCA 72 bp | CTTCTGGTGGTCCTGCGTGTCGGTCTGCATGTCCCGTaGCAATTCCACAGGCAGCACGGAAGACACCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLVVLRVGLHVP*QFHRQHGRHQS Trigger: ACTCTGGTGTCTTCCGTGCTGCCTGTGGAATTGGCACGGGACATGCAGACCGACACGCAGGACCACCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CCA 72 bp | CCGCACGAGTTCCATCAGCTCTGCCCCAATGGTCCTTaGCACAACTGTCTCAGCGGCTGCCTTCTCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PHEFHQLCPNGP*HNCLSGCLLLC Trigger: ACAGAGGAGAAGGCAGCCGCTGAGACAGTTGTGCCAAGGACCATTGGGGCAGAGCTGATGGAACTCGTGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CCA 72 bp | CGAGCCAGGTCTGCAAAAATCACTTCCAGTCTCTGCTaGTCGTGGCAGACCTGCCCTGAGGGTAGGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RARSAKITSSLC*SWQTCPEGRAV Trigger: CACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCTGGCTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035218.9 ENSMUST00000192678.2 |
||
| CDS CCA 72 bp | GTGCGTAGGGTACCGCCTCTCCCATGGAGAAGACCATaGCCAGGACGAGGGCAGAGTAACAGAGCTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VRRVPPLPWRRP*PGRGQSNRASG Trigger: ACCAGAAGCTCTGTTACTCTGCCCTCGTCCTGGCCATGGTCTTCTCCATGGGAGAGGCGGTACCCTACGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CAA 72 bp | TCCGCACGAGTTCCATCAGCTCTGCCCCAATGGTCCTaGGCACAACTGTCTCAGCGGCTGCCTTCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SARVPSALPQWS*AQLSQRLPSPL Trigger: CAGAGGAGAAGGCAGCCGCTGAGACAGTTGTGCCAAGGACCATTGGGGCAGAGCTGATGGAACTCGTGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
||
| CDS CAA 90 bp | CGGTGTTTCTCCGCACGAGTTCCATCAGCTCTGCCCCAATGGTCCTaGGCACAACTGTCTCAGCGGCTGCCTTCTCCTCTGTGGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RCFSARVPSALPQWS*AQLSQRLPSPLWSL Trigger: CAGAGACCACAGAGGAGAAGGCAGCCGCTGAGACAGTTGTGCCAAGGACCATTGGGGCAGAGCTGATGGAACTCGTGCGGAGAAACACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS TCA 72 bp | TCGCTGCATCTAGGCTGCACATGGCACCGAAACACTTaGGGAGCAGCAGCCGTAGAGACGCTCGGTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLHLGCTWHRNT*GAAAVETLGVP Trigger: TGGAACACCGAGCGTCTCTACGGCTGCTGCTCCTCAAGTGTTTCGGTGCCATGTGCAGCCTAGATGCAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS TCA 72 bp | CTCTTGGACAATCATACGGTCCATCTGGCACTGGGGTaGGGCCTCTTCCTCAGTCAGGATGCGCCGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: LLDNHTVHLALG*GLFLSQDAPQC Trigger: ACACTGCGGCGCATCCTGACTGAGGAAGAGGCCTCACCCCAGTGCCAGATGGACCGTATGATTGTCCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | GCTTCTGAAGGACTCCACGCTGTTCCAGGCTGTACTTaGCGCCATCTCGCATGGCTGTGTTGTGCACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: ASEGLHAVPGCT*RHLAWLCCAQP Trigger: AGGCTGTGCACAACACAGCCATGCGAGATGGCGGCAAGTACAGCCTGGAACAGCGTGGAGTCCTTCAGAAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035218.9 ENSMUST00000194819.2 |
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| CDS CCA 72 bp | CCCACCACGACGCCGATGGCTACACGGCATAACTCATaGCTTAGACCGGTGTTTCTCCGCACGAGTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: PTTTPMATRHNS*LRPVFLRTSSI Trigger: GATGGAACTCGTGCGGAGAAACACCGGTCTAAGCCATGAGTTATGCCGTGTAGCCATCGGCGTCGTGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | AGGTCTGCAAAAATCACTTCCAGTCTCTGCTGGTCGTaGCAGACCTGCCCTGAGGGTAGGGCTGTGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSAKITSSLCWS*QTCPEGRAVLR Trigger: CCTGAGCACAGCCCTACCCTCAGGGCAGGTCTGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035218.9 ENSMUST00000192678.2 |
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| CDS CCA 72 bp | GGTGTTCATAGTGTGCGTAGGGTACCGCCTCTCCCATaGAGAAGACCATGGCCAGGACGAGGGCAGAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: GVHSVRRVPPLP*RRPWPGRGQSN Trigger: GTTACTCTGCCCTCGTCCTGGCCATGGTCTTCTCCATGGGAGAGGCGGTACCCTACGCACACTATGAACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CAA 72 bp | ATCGCTGCATCTAGGCTGCACATGGCACCGAAACACTaGAGGAGCAGCAGCCGTAGAGACGCTCGGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: IAASRLHMAPKH*RSSSRRDARCS Trigger: GGAACACCGAGCGTCTCTACGGCTGCTGCTCCTCAAGTGTTTCGGTGCCATGTGCAGCCTAGATGCAGCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CAA 90 bp | TCGCATGGCTGTGTTGTGCACAGCCTCAATGGCACGGTCAATAGCTaGGAGGACATCTTGTTCCATGCCCTGCAGGCGATGCAGGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: SHGCVVHSLNGTVNS*EDILFHALQAMQVG Trigger: GCCTACCTGCATCGCCTGCAGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACACAGCCATGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CAA 90 bp | CTGGGCAGGCTATGCTGCCGTTCAAACCCAGTTCGACACACCCCATaGGGCTGTCTAGATACAGCAGCGTCCAAATGGTGGTCACTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LGRLCCRSNPVRHTP*GCLDTAASKWWSLV Trigger: CACCAGTGACCACCATTTGGACGCTGCTGTATCTAGACAGCCCAATGGGGTGTGTCGAACTGGGTTTGAACGGCAGCATAGCCTGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | TCTGTCCCAAGATGCTCAGAACTGGGCAGGCTATGCTaGCGTTCAAACCCAGTTCGACACACCCCATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SVPRCSELGRLC*RSNPVRHTPLG Trigger: GCCCAATGGGGTGTGTCGAACTGGGTTTGAACGGCAGCATAGCCTGCCCAGTTCTGAGCATCTTGGGACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | GCGCTGCTGGGCGTCATCCTTTCTTCGAGCCAGGTCTaGAAAAATCACTTCCAGTCTCTGCTGGTCGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: ALLGVILSSSQV*KNHFQSLLVVA Trigger: TGCCACGACCAGCAGAGACTGGAAGTGATTTTTGCAGACCTGGCTCGAAGAAAGGATGACGCCCAGCAGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | GGTAGAGGGCTCCATCTGTCCCAAGATGCTCAGAACTaGGCAGGCTATGCTGCCGTTCAAACCCAGTTCGAC | + |
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Preference number: 6 (lower is better) Translates to: GRGLHLSQDAQN*AGYAAVQTQFD Trigger: GTCGAACTGGGTTTGAACGGCAGCATAGCCTGCCCAGTTCTGAGCATCTTGGGACAGATGGAGCCCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | TGTTTCTCCGCACGAGTTCCATCAGCTCTGCCCCAATaGTCCTTGGCACAACTGTCTCAGCGGCTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CFSARVPSALPQ*SLAQLSQRLPS Trigger: AGAAGGCAGCCGCTGAGACAGTTGTGCCAAGGACCATTGGGGCAGAGCTGATGGAACTCGTGCGGAGAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | ACATCCTGCAGGAACTTGAGGACAGAGTGTGGTGGCTaGGGCTCATGTCTGAAGATACGCACAGGGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: TSCRNLRTECGG*GSCLKIRTGSS Trigger: GGACGACCCTGTGCGTATCTTCAGACATGAGCCCCAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | GTGTTGTGCACAGCCTCAATGGCACGGTCAATAGCTTaGAGGACATCTTGTTCCATGCCCCGGTCTCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VLCTASMARSIA*RTSCSMPRSRH Trigger: GTGGCGAGACCGGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194819.2 |
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| CDS CAA 72 bp | AGCCTCAATGGCACGGTCAATAGCTTGGAGGACATCTaGTTCCATGCCCTGCAGGCGATGCAGGTAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLNGTVNSLEDI*FHALQAMQVGR Trigger: CCTGCCTACCTGCATCGCCTGCAGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS GCA 72 bp | GCTCCGTGGTGTCCATTGGAAGGCCATCCTCAACGATaGTTAGTAGGAACTGGGCAAAGGGTGTACCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: APWCPLEGHPQR*LVGTGQRVYPG Trigger: ACCTGGGTACACCCTTTGCCCAGTTCCTACTAAGCATCGTTGAGGATGGCCTTCCAATGGACACCACGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | GTGTTGTGCACAGCCTCAATGGCACGGTCAATAGCTTaGAGGACATCTTGTTCCATGCCCTGCAGGCGATGC | + |
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Preference number: 6 (lower is better) Translates to: VLCTASMARSIA*RTSCSMPCRRC Trigger: GCATCGCCTGCAGGGCATGGAACAAGATGTCCTCCAAGCTATTGACCGTGCCATTGAGGCTGTGCACAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | GAAGCAGGTTCATGCAGAGGTCTGGCAGCTGCTCCGTaGTGTCCATTGGAAGGCCATCCTCAACGATGCTTA | + |
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Preference number: 6 (lower is better) Translates to: EAGSCRGLAAAP*CPLEGHPQRCL Trigger: TAAGCATCGTTGAGGATGGCCTTCCAATGGACACCACGGAGCAGCTGCCAGACCTCTGCATGAACCTGCTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | GCTGAACACATCCTGCAGGAACTTGAGGACAGAGTGTaGTGGCTGGGGCTCATGTCTGAAGATACGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: AEHILQELEDRV*WLGLMSEDTHR Trigger: CCTGTGCGTATCTTCAGACATGAGCCCCAGCCACCACACTCTGTCCTCAAGTTCCTGCAGGATGTGTTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | CCATTGGGCTGTCTAGATACAGCAGCGTCCAAATGGTaGTCACTGGTGGATGGGGTCATAACCGTAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: PLGCLDTAASKW*SLVDGVITVAL Trigger: CAGTGCTACGGTTATGACCCCATCCACCAGTGACCACCATTTGGACGCTGCTGTATCTAGACAGCCCAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | ACCCCATTGGGCTGTCTAGATACAGCAGCGTCCAAATaGTGGTCACTGGTGGATGGGGTCATAACCGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: TPLGCLDTAASK*WSLVDGVITVA Trigger: TGCTACGGTTATGACCCCATCCACCAGTGACCACCATTTGGACGCTGCTGTATCTAGACAGCCCAATGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | ACCTCTCCCAGGTCCGGGAATTCCTTGTACATCTCTTaGACAATCATACGGTCCATCTGGCACTGGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: TSPRSGNSLYIS*TIIRSIWHWGE Trigger: CTCACCCCAGTGCCAGATGGACCGTATGATTGTCCAAGAGATGTACAAGGAATTCCCGGACCTGGGAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CAA 72 bp | CTATGCTGCCGTTCAAACCCAGTTCGACACACCCCATaGGGCTGTCTAGATACAGCAGCGTCCAAATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LCCRSNPVRHTP*GCLDTAASKWW Trigger: CCACCATTTGGACGCTGCTGTATCTAGACAGCCCAATGGGGTGTGTCGAACTGGGTTTGAACGGCAGCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | ATGCGTAGCTTGTCTCCAGGTGACAGGTCTGCGATCTaGCGCACAGTGATGTCAATAAGCGCCATCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: MRSLSPGDRSAI*RTVMSISAIMS Trigger: AGACATGATGGCGCTTATTGACATCACTGTGCGCCAGATCGCAGACCTGTCACCTGGAGACAAGCTACGCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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| CDS CCA 72 bp | TCCTTGTACATCTCTTGGACAATCATACGGTCCATCTaGCACTGGGGTGAGGCCTCTTCCTCAGTCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: SLYISWTIIRSI*HWGEASSSVRM Trigger: CATCCTGACTGAGGAAGAGGCCTCACCCCAGTGCCAGATGGACCGTATGATTGTCCAAGAGATGTACAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035218.9 |
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