RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCKAP5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049690

Ensembl transcript IDs: ENSMUST00000057846.15, ENSMUST00000094609.10, ENSMUST00000094610.5, ENSMUST00000112583.8, ENSMUST00000160693.2, ENSMUST00000161954.8, ENSMUST00000162646.8, ENSMUST00000162877.8

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGTGGCAAGTGGACCACCCAATCGAGAGAGACCTTCAGAACAGGTaGCCTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATT +
Preference number: 1 (lower is better)
Translates to: MWQVDHPIERDLQNR*PPPLWLSCLPHASI
Trigger: AATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAGGTCACCTGTTCTGAAGGTCTCTCTCGATTGGGTGGTCCACTTGCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR GCA 90 bp TGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATaGAGGAGTCTCACTGAAGGATGCTCCTCTAGGCCTCGTTGGATG +
Preference number: 1 (lower is better)
Translates to: WLSASLESVCLVHHA*RSLTEGCSSRPRWM
Trigger: CATCCAACGAGGCCTAGAGGAGCATCCTTCAGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
3UTR TCA 90 bp CAGAATTGTGAGAAATACAATGGAGAGGATAGAAGAGGTTGGGAGTaGAGCCTGCTAAGATCTGCTCCCTTCCGCATCATCTGGTGCCAT +
Preference number: 1 (lower is better)
Translates to: QNCEKYNGEDRRGWE*SLLRSAPFRIIWCH
Trigger: ATGGCACCAGATGATGCGGAAGGGAGCAGATCTTAGCAGGCTTCACTCCCAACCTCTTCTATCCTCTCCATTGTATTTCTCACAATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR-3UTR GCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACGTTGGATGCTTGACTTaGACAAGAGGAGAAACTGTC +
Preference number: 2 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHVGCLT*TRGETV
Trigger: GACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAAC...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
3UTR-3UTR GCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGCTAGTGCACCATGCATaGAGGAGTCTCACTGAAGGA +
Preference number: 2 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMLVHHA*RSLTEG
Trigger: TCCTTCAGTGAGACTCCTGCATGCATGGTGCACTAG...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR-3UTR GCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCCTAGTGCACCATGCATaGAGGAGTCTCACTGAAGGA +
Preference number: 2 (lower is better)
Translates to: LLELNASFQEHGANSFYCLVHHA*RSLTEG
Trigger: TCCTTCAGTGAGACTCCTGCATGCATGGTGCACTAG...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR-3UTR GCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTCTAGTGCACCATGCATaGAGGAGTCTCACTGAAGGA +
Preference number: 2 (lower is better)
Translates to: ICTNELRTKMIMFTKSSALVHHA*RSLTEG
Trigger: TCCTTCAGTGAGACTCCTGCATGCATGGTGCACTAG...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR GCA 72 bp GCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATaGAGGAGTCTCACTGAAGGATGCTCCTCTAGGCCT +
Preference number: 3 (lower is better)
Translates to: ASLESVCLVHHA*RSLTEGCSSRP
Trigger: AGGCCTAGAGGAGCATCCTTCAGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
3UTR-3UTR CAA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACGCCAACTCTTTTTATaGCTATCTTTCTCCCCCTAC +
Preference number: 3 (lower is better)
Translates to: LHPSGFPACPTLPLTVYARQLFL*LSFSPY
Trigger: GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCG...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR CCA 72 bp AGGAGTCTCACTGAAGGATGCTCCTCTAGGCCTCGTTaGATGCTTGACTTGCACAAGAGGAGAAACTGTCAT +
Preference number: 3 (lower is better)
Translates to: RSLTEGCSSRPR*MLDLHKRRNCH
Trigger: ATGACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAACGAGGCCTAGAGGAGCATCCTTCAGTGAGACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
3UTR CCA 72 bp GAACACCCATATCATCACATCTTCCTCGAGACAATGTaGCAAGTGGACCACCCAATCGAGAGAGACCTTCAG +
Preference number: 3 (lower is better)
Translates to: EHPYHHIFLETM*QVDHPIERDLQ
Trigger: CTGAAGGTCTCTCTCGATTGGGTGGTCCACTTGCCACATTGTCTCGAGGAAGATGTGATGATATGGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR TCA 72 bp GAGAAATACAATGGAGAGGATAGAAGAGGTTGGGAGTaGAGCCTGCTAAGATCTGCTCCCTTCCGCATCATC +
Preference number: 3 (lower is better)
Translates to: EKYNGEDRRGWE*SLLRSAPFRII
Trigger: GATGATGCGGAAGGGAGCAGATCTTAGCAGGCTTCACTCCCAACCTCTTCTATCCTCTCCATTGTATTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR GCA 72 bp AAGGATGCTCCTCTAGGCCTCGTTGGATGCTTGACTTaGACAAGAGGAGAAACTGTCATACAGAGAGTCACT +
Preference number: 3 (lower is better)
Translates to: KDAPLGLVGCLT*TRGETVIQRVT
Trigger: AGTGACTCTCTGTATGACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAACGAGGCCTAGAGGAGCATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
3UTR-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGCCTTTCTCTTCCTTTaGTCCTTCAACCTCACTTGG +
Preference number: 3 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAAFLFL*SFNLTW
Trigger: CCAAGTGAGGTTGAAGGACAAAAGGAAGAGAAAGGC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
3UTR GCA 72 bp GCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTaGTATCTTTCTCCCCCTACAAATATAATTTCTCTC +
Preference number: 3 (lower is better)
Translates to: ASFQEHGANSFY*YLSPPTNIISL
Trigger: GAGAGAAATTATATTTGTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGTCCTTCAACCTCACTaGGAGACTTCTCTTTTCCTA +
Preference number: 3 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAVLQPH*ETSLFL
Trigger: TAGGAAAAGAGAAGTCTCCAAGTGAGGTTGAAGGAC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGGCAGGGGATCCCCATaGCAGACGGTTGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAGRGSP*QTVGRA
Trigger: CGCCCTGCCAACCGTCTGGCATGGGGATCCCCTGCC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGCGTCTCCAGGGCCCTaGGTTTCAGGTTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAASPGP*VSGLAG
Trigger: ACCTGCCAAACCTGAAACTCAGGGCCCTGGAGACGC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCATGGCAGAGGATGCCATaGAAGCGGCTGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAWQRMP*KRLAGE
Trigger: CTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCA...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGGGAAGGTGACTCTGTaGGGCTCTCATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAGKVTL*GSHLSG
Trigger: GCCAGAGAGATGAGAGCCTCACAGAGTCACCTTCCC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAAGCTCTGGCTGTCTGTaGAGGAAGGCACTTCGCGGT +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYASSGCL*RKALRG
Trigger: ACCGCGAAGTGCCTTCCTCCACAGACAGCCAGAGCT...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGCATCTGGATCCTGTTaGGCTCTGACTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAASGSC*ALTPGS
Trigger: TGACCCTGGAGTCAGAGCGCAACAGGATCCAGATGC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGGGTCCCTGTCTCTTTaGACCCAGGGCAGGTGTATA +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAGSLSL*TQGRCI
Trigger: TATACACCTGCCCTGGGTGCAAAGAGACAGGGACCC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGGGTGAACGAAGGCCCTaGCCTGGGCTTCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEGERRP*PGLHFH
Trigger: GTGGAAGTGAAGCCCAGGGCAGGGCCTTCGTTCACC...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGACGAAGGCCCTGCCCTaGGCTTCACTTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQETKALP*ASLPQR
Trigger: CCTCTGTGGAAGTGAAGCCCAGGGCAGGGCCTTCGT...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGATGGAAGCGGCTGGCTaGAGAGGCAGGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEMEAAG*RGRRAS
Trigger: TGATGCCCTCCTGCCTCTCCAGCCAGCCGCTTCCAT...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGCACTACCGCTTGGGTTaGGGGAAGAGCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEHYRLG*GKSWRE
Trigger: TTCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTG...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCATGGACTCTGACCATCTaGCTTCTTGGTCCCCCTACT +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAWTLTI*LLGPPT
Trigger: AGTAGGGGGACCAAGAAGGCAGATGGTCAGAGTCCA...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGGCATCAGTGTCCTCTaGAGAGTCCTGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAGISVL*RVLLAY
Trigger: ATATGCCAGCAGGACTCTCCAGAGGACACTGATGCC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACATGGAAGCGGCTGGCTaGAGAGGCAGGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHMEAAG*RGRRAS
Trigger: TGATGCCCTCCTGCCTCTCCAGCCAGCCGCTTCCAT...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTGGCAGAGGATGCCATaGAAGCGGCTGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTWQRMP*KRLAGE
Trigger: CTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCGCGGTCAAGGGTTTaGGCTCTGGCAGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHSRSRV*ALAEDA
Trigger: GGCATCCTCTGCCAGAGCCCAAACCCTTGACCGCGA...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTGATCCTGTTGCGCTCTaGCTCCAGGGTCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILADPVAL*LQGHLP
Trigger: CGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATC...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTACGACTCCAGCCTGGTaGGAGCTGAATTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTTTPAW*ELNSTG
Trigger: GCCAGTGGAATTCAGCTCTCACCAGGCTGGAGTCGT...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGGGAAGGTGACTCTGTaGGGCTCTCATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTGKVTL*GSHLSG
Trigger: GCCAGAGAGATGAGAGCCTCACAGAGTCACCTTCCC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGGCATCTGGATCCTGTTaGGCTCTGACTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMASGSC*ALTPGS
Trigger: TGACCCTGGAGTCAGAGCGCAACAGGATCCAGATGC...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACCTCTCCAAGGGGCAGTaGCTAGCACAACGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHLSKGQ*LAQRAS
Trigger: GCTAGCTCGTTGTGCTAGCCACTGCCCCTTGGAGAG...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGGAAGGCAGACTTTCTaGAGGCCACAGATGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAGRQTF*RPQMVS
Trigger: AGAAACCATCTGTGGCCTCCAGAAAGTCTGCCTTCC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGGGTCAGATATGGAATaGATGATCATGGACTCCGGG +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAGSDME*MIMDSG
Trigger: CCCGGAGTCCATGATCATCCATTCCATATCTGACCC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACACTGTGCTCGCTTCTTaGGTCCTCATCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHTVLAS*VLISCH
Trigger: GTGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGT...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTACTGTGCTCGCTTCTTaGGTCCTCATCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTTVLAS*VLISCH
Trigger: GTGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGT...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGCATCAGAAGCTGGTCTaGCTCGCTGTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMHQKLV*LAVGTG
Trigger: TCCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATG...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTGCGTCTCCAGGGCCCTaGGTTTCAGGTTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAASPGP*VSGLAG
Trigger: ACCTGCCAAACCTGAAACTCAGGGCCCTGGAGACGC...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCATACTTTCAGACTCTCTaGGCTTTGCAGACCATCGTC +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAYFQTL*ALQTIV
Trigger: GACGATGGTCTGCAAAGCTCAGAGAGTCTGAAAGTA...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTTCTGTGTTGCTCCCTaGGTTGTGCCAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTFCVAP*VVPAGA
Trigger: AGCACCTGCTGGCACAACTCAGGGAGCAACACAGAA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR TCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGCTTGTACATCTTCATTaGCCTCGGCCCCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMLVHLH*PRPPGE
Trigger: TTCTCCAGGGGGCCGAGGTCAATGAAGATGTACAAG...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGAGATCACCCAGTGCTaGTTGCTCTTTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAEITQC*LLFSLF
Trigger: GAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGTCGGTATCTGAGAGCTaGAGGTTCAGAGGCACATGG +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMSVSES*RFRGTW
Trigger: CCATGTGCCTCTGAACCTGCAGCTCTCAGATACCGA...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTGTATCAGCTTCTCGTaGATGGCCCCTTGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQECISFS*MAPWLV
Trigger: GACAAGCCAAGGGGCCATGCACGAGAAGCTGATACA...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR GCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACCACTGCTGCAGCTGTTaGGAGGACAGAGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHHCCSC*EDRGDQ
Trigger: CTGATCACCTCTGTCCTCGCAACAGCTGCAGCAGTG...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACGGTCTGACTCGCTGTTaGAACAGGAGGCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHGLTRC*NRRLSA
Trigger: AGCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACC...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTGTTCATCTGCAGGGCTaGCGAAGCCACTTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAVHLQG*RSHLGA
Trigger: CGCTCCCAAGTGGCTTCGCCAGCCCTGCAGATGAAC...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACCTGATTTTGCATTCTaGAGGTGTTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAPDFAF*RCSWRS
Trigger: GCTTCTCCAGGAACACCTCCAGAATGCAAAATCAGG...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACCTTCCTGGTAGGCTGTaGTCTTGGCAGGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHLPGRL*SWQVLP
Trigger: AGGAAGAACCTGCCAAGATCACAGCCTACCAGGAAG...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGATTGTCATCGGTATCTaGGAGCTGCAGGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEIVIGI*ELQVQR
Trigger: CCTCTGAACCTGCAGCTCTCAGATACCGATGACAAT...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTGGACTCATTCACTCCTaGGAAGGAAGGCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAGLIHS*EGRPVG
Trigger: CCCCACAGGCCTTCCTTCTCAGGAGTGAATGAGTCC...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGAACTGAGGGCAGTCTaGAAGAGGAGATGGATGCCT +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTELRAV*KRRWMP
Trigger: AGGCATCCATCTCCTCTTTCAGACTGCCCTCAGTTC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGGACTCTGACCATCTaGCTTCTTGGTCCCCCTACT +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHWTLTI*LLGPPT
Trigger: AGTAGGGGGACCAAGAAGGCAGATGGTCAGAGTCCA...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCATTCCTTTTTCTGCTCTaGAGATCCTTGGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAFLFLL*RSLALQ
Trigger: TTGCAGAGCCAAGGATCTCCAGAGCAGAAAAAGGAA...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACTCGAACAACTTGGTTaGCTACCTCATCAAGACATC +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYALEQLG*LPHQDI
Trigger: GATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAG...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGGCTGGCGAAGCCACTTaGGAGCGAAGAATCAATACT +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEAGEAT*ERRINT
Trigger: AGTATTGATTCTTCGCTCCCAAGTGGCTTCGCCAGC...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTCTCTCCAAGGGGCAGTaGCTAGCACAACGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILALSKGQ*LAQRAS
Trigger: GCTAGCTCGTTGTGCTAGCCACTGCCCCTTGGAGAG...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATTCGCGGTCAAGGGTTTaGGCTCTGGCAGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYSRSRV*ALAEDA
Trigger: GGCATCCTCTGCCAGAGCCCAAACCCTTGACCGCGA...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTAGCTCTGGCTGTCTGTaGAGGAAGGCACTTCGCGGT +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILASSGCL*RKALRG
Trigger: ACCGCGAAGTGCCTTCCTCCACAGACAGCCAGAGCT...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCAGCTTCTCGTGCATaGCCCCTTGGCTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHSASRA*PLGLSF
Trigger: AAAGGACAAGCCAAGGGGCCATGCACGAGAAGCTGA...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR TCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACGACTCCAGCCTGGTaGGAGCTGAATTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYTTPAW*ELNSTG
Trigger: GCCAGTGGAATTCAGCTCTCACCAGGCTGGAGTCGT...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGGCAGGGGATCCCCATaGCAGACGGTTGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITGRGSP*QTVGRA
Trigger: CGCCCTGCCAACCGTCTGGCATGGGGATCCCCTGCC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTGGGTCCCTGTCTCTTTaGACCCAGGGCAGGTGTATA +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAGSLSL*TQGRCI
Trigger: TATACACCTGCCCTGGGTGCAAAGAGACAGGGACCC...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGAGGCAGACTTTGTCTaGACTTGGCCCTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTEADFV*TWPFST
Trigger: TGTGGAAAAGGGCCAAGTGCAGACAAAGTCTGCCTC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGTCTCTCTGGCCATCATaGTGGGGTCAGATATGGAAT +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMSLWPS*WGQIWN
Trigger: ATTCCATATCTGACCCCAGCATGATGGCCAGAGAGA...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGCAGTTTCTTCCATTCTaGAAAACTGCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEQFLPF*KTAAAG
Trigger: GCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTG...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCCTGAGTTTCAGGTTTaGCAGGTGATGGTAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTPEFQV*QVMVVV
Trigger: CACCACTACCATCACCTGCCAAACCTGAAACTCAGG...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGTCACAGCAAATGGACTaGAGGCTATGTGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMSQQMD*RLCVQG
Trigger: ACCCTGAACACATAGCCTCCAGTCCATTTGCTGTGA...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTAAGTCTGTGTCCATGTaGGCAGTTCCTAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTKSVSM*AVPSAW
Trigger: CCATGCACTAGGAACTGCCCACATGGACACAGACTT...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTCAAGGGTTTGGGCTCTaGCAGAGGATGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAQGFGL*QRMPWK
Trigger: CTTCCATGGCATCCTCTGCCAGAGCCCAAACCCTTG...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCGATCCTGTTGCGCTCTaGCTCCAGGGTCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCDPVAL*LQGHLP
Trigger: CGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATC...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGACACTACCGCTTGGGTTaGGGGAAGAGCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGHYRLG*GKSWRE
Trigger: TTCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTG...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTGAACTGAGGGCAGTCTaGAAGAGGAGATGGATGCCT +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAELRAV*KRRWMP
Trigger: AGGCATCCATCTCCTCTTTCAGACTGCCCTCAGTTC...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACCCTGAATGCACAACATaGCCTTTTCTTCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHPECTT*PFLRWR
Trigger: CCTCCATCGAAGAAAAGGTCATGTTGTGCATTCAGG...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCCTGAATGCACAACATaGCCTTTTCTTCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTPECTT*PFLRWR
Trigger: CCTCCATCGAAGAAAAGGTCATGTTGTGCATTCAGG...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCATTTTCCACATTCTCCTaGATGCACAACATGACCTTT +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAFSTFS*MHNMTF
Trigger: AAAGGTCATGTTGTGCATTCAGGAGAATGTGGAAAA...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACAAAACTAGGTTTTCCTaGGGAGGTAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHKTRFS*GGRLGK
Trigger: CTTCCCAAGCCTACCTCCTCAGGAAAACCTAGTTTT...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTATGGAGATCACCCAGTaGTGCTTGCTCTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTMEITQ*CLLFSL
Trigger: GAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCAT...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACATGGAGATCACCCAGTaGTGCTTGCTCTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHMEITQ*CLLFSL
Trigger: GAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCAT...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCGGTGAACGAAGGCCCTaGCCTGGGCTTCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPGERRP*PGLHFH
Trigger: GTGGAAGTGAAGCCCAGGGCAGGGCCTTCGTTCACC...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACAGCGATAGCTCACTaGCACTGCTGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYTAIAH*HCCSCC
Trigger: GCAACAGCTGCAGCAGTGGCAGTGAGCTATCGCTGT...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACCAGTTTCTTCCATTCTaGAAAACTGCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHQFLPF*KTAAAG
Trigger: GCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTG...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTTCCTTTTTCTGCTCTaGAGATCCTTGGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEFLFLL*RSLALQ
Trigger: TTGCAGAGCCAAGGATCTCCAGAGCAGAAAAAGGAA...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGCTCGAACAACTTGGTTaGCTACCTCATCAAGACATC +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQELEQLG*LPHQDI
Trigger: GATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAG...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGAGTCCCTCTAGAATGTaGCTTTCTTTGATACGGGTC +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQESPSRM*LSLIRV
Trigger: GACCCGTATCAAAGAAAGCCACATTCTAGAGGGACT...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCATCTTATTGGAAATTTTaGGGATATGAGGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: LHPSGFPACPTLPLTVYASYWKF*GYEEPG
Trigger: CCCAGGTTCCTCATATCCCCAAAATTTCCAATAAGA...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGCAGAGACACAGCCATTaGACCTCATTTCACTACTGT +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMQRHSH*TSFHYC
Trigger: ACAGTAGTGAAATGAGGTCCAATGGCTGTGTCTCTG...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACCCTTGTGAGGACCCTTaGTTTCTACAGGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHPCEDP*FLQDEE
Trigger: TTCCTCATCCTGTAGAAACCAAGGGTCCTCACAAGG...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCATGGAAGCGGCTGGCTaGAGAGGCAGGAGGGCATCA +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPMEAAG*RGRRAS
Trigger: TGATGCCCTCCTGCCTCTCCAGCCAGCCGCTTCCAT...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTCGCGGTCAAGGGTTTaGGCTCTGGCAGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPSRSRV*ALAEDA
Trigger: GGCATCCTCTGCCAGAGCCCAAACCCTTGACCGCGA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTTCAGCTTCTCGTGCATaGCCCCTTGGCTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILASASRA*PLGLSF
Trigger: AAAGGACAAGCCAAGGGGCCATGCACGAGAAGCTGA...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATGTAGGAGGAGCCACTaGAGTACTCGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGCRRSH*STRCRC
Trigger: GCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGATCCTGTTGCGCTCTaGCTCCAGGGTCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITDPVAL*LQGHLP
Trigger: CGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACACTGTGCTCGCTTCTTaGGTCCTCATCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYTVLAS*VLISCH
Trigger: GTGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGT...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTCAGCAAGGGCTGAGCTaGTGGAAATTTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSQQGLS*WKFHPW
Trigger: CCAGGGATGAAATTTCCATCAGCTCAGCCCTTGCTG...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACGAGGTGAAAGTTCAGTaGGTTCCTCTGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYEVKVQ*VPLRAQ
Trigger: CTGGGCCCTCAGAGGAACTCACTGAACTTTCACCTC...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCAACCAAACCAGCTGGTaGACGAAGGCCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCNQTSW*TKALPW
Trigger: CCAGGGCAGGGCCTTCGTTCACCAGCTGGTTTGGTT...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGTTAGAAGTTCTGTCATaGAGGCATCTTTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMLEVLS*RHLLLG
Trigger: GCCCAACAAAAGATGCCTTCATGACAGAACTTCTAA...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATTGCGAGGACAGAGGTaGTCAGGGATGACAACCCCT +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGLRGQR*SGMTTP
Trigger: AGGGGTTGTCATCCCTGATCACCTCTGTCCTCGCAA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTCACCCAGTGCTGCTTaGTCTTTTCTCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTSPSAA*SFLSSS
Trigger: TGATGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTCTGAGGTGAAGACTTaGCTCTGGAAGGGATTTTTG +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTSEVKT*LWKGFL
Trigger: CAAAAATCCCTTCCAGAGGCAAGTCTTCACCTCAGA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGAAGAAGCATCTGGATaGCTTCCAGAAGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTEEASG*LPEVSS
Trigger: GCTAGAAACTTCTGGAAGGCATCCAGATGCTTCTTC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGTTGGATGCTTGACTTaGACAAGAGGAGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTVGCLT*TRGETV
Trigger: GACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAAC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATCACTGGAGTACTCGCTaGAGGTGCTTGACAGCGATA +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYHWSTR*RCLTAI
Trigger: TATCGCTGTCAAGCACCTGCAGCGAGTACTCCAGTG...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATTGCTCTGGAGATCCTTaGCTCTGCAACAGACTTCGG +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYCSGDP*LCNRLR
Trigger: CCGAAGTCTGTTGCAGAGCCAAGGATCTCCAGAGCA...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGAGGTCTGACTCGCTGTTaGAACAGGAGGCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGGLTRC*NRRLSA
Trigger: AGCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACC...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCGTTCATCTGCAGGGCTaGCGAAGCCACTTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCVHLQG*RSHLGA
Trigger: CGCTCCCAAGTGGCTTCGCCAGCCCTGCAGATGAAC...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTAGTCCCTCTAGAATGTaGCTTTCTTTGATACGGGTC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTSPSRM*LSLIRV
Trigger: GACCCGTATCAAAGAAAGCCACATTCTAGAGGGACT...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGGGCGAGCTTTGGTCTTaGGGAATTCTGAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMGELWS*GILSYY
Trigger: ATAATAACTCAGAATTCCCCAAGACCAAAGCTCGCC...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTAGAAGGATCTTTTTATaGCTCTGCTGTCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTRRIFL*LCCLPH
Trigger: ATGGGGCAGACAGCAGAGCCATAAAAAGATCCTTCT...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGGCCTGGCCCTTCTGTTaGGGGTGTGGAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMAWPFC*GCGRLL
Trigger: GAGAAGCCTTCCACACCCCCAACAGAAGGGCCAGGC...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTTCTCATCTGGCAGTTaGATTCTATCATGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEFSSGS*ILSCGS
Trigger: AGAGCCACATGATAGAATCCAACTGCCAGATGAGAA...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATGGCATCAGTGTCCTCTaGAGAGTCCTGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYGISVL*RVLLAY
Trigger: ATATGCCAGCAGGACTCTCCAGAGGACACTGATGCC...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCAAGGGTTTGGGCTCTaGCAGAGGATGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYQGFGL*QRMPWK
Trigger: CTTCCATGGCATCCTCTGCCAGAGCCCAAACCCTTG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTGGGTCAGATATGGAATaGATGATCATGGACTCCGGG +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAGSDME*MIMDSG
Trigger: CCCGGAGTCCATGATCATCCATTCCATATCTGACCC...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGACATCAGAAGCTGGTCTaGCTCGCTGTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGHQKLV*LAVGTG
Trigger: TCCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATG...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCATCAGAAGCTGGTCTaGCTCGCTGTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYHQKLV*LAVGTG
Trigger: TCCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGTGTTTTGGAATGTGTaGTTCTGGCTGTACATCACA +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTVFWNV*FWLYIT
Trigger: TGTGATGTACAGCCAGAATCACACATTCCAAAACAC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCTCCCAAGTGGATGCTaGAGCTCTGACTCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPLPSGC*SSDSEL
Trigger: AAGCTCGGAGTCAGAGCTTCAGCATCCACTTGGGAG...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTAACCAAACCAGCTGGTaGACGAAGGCCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLNQTSW*TKALPW
Trigger: CCAGGGCAGGGCCTTCGTTCACCAGCTGGTTTGGTT...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTTAGAAGTTCTGTCATaGAGGCATCTTTTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTLEVLS*RHLLLG
Trigger: GCCCAACAAAAGATGCCTTCATGACAGAACTTCTAA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCGGGAAGGTGACTCTGTaGGGCTCTCATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCGKVTL*GSHLSG
Trigger: GCCAGAGAGATGAGAGCCTCACAGAGTCACCTTCCC...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTAAAACTAGGTTTTCCTaGGGAGGTAGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAKTRFS*GGRLGK
Trigger: CTTCCCAAGCCTACCTCCTCAGGAAAACCTAGTTTT...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATTCTTCAGGAGCAGTCTaGTGTCTTCCTTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYSSGAV*CLPFPP
Trigger: AGGAGGGAAAGGAAGACAGCAGACTGCTCCTGAAGA...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTAAAAGGACAGTCTCTTaGAGTAGCTCCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAKRTVS*SSSCLE
Trigger: TTCCAGGCAGGAGCTACTGCAAGAGACTGTCCTTTT...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATTATGGCTCTGCTGTCTaGCCCATCTCTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYYGSAV*PISSII
Trigger: GATGATGGAAGAGATGGGGCAGACAGCAGAGCCATA...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTCTACAGAGAGAACTCTaGCTGGAAAAGGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSLQREL*LEKGFP
Trigger: GGGAAACCCCTTTTCCAGGCAGAGTTCTCTCTGTAG...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATCTACAGAGAGAACTCTaGCTGGAAAAGGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYLQREL*LEKGFP
Trigger: GGGAAACCCCTTTTCCAGGCAGAGTTCTCTCTGTAG...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGTATTCCACAAGACTaGTGTCCAGAGAGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHCIPQD*CPERVF
Trigger: AAAGACTCTCTCTGGACAGCAGTCTTGTGGAATACA...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR GCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCTTGCTCCCTGAGTTGTaGCAGCAGGTGCTCGATGCA +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHILLPEL*QQVLDA
Trigger: TGCATCGAGCACCTGCTGGCACAACTCAGGGAGCAA...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTCAGTTTCTTCCATTCTaGAAAACTGCTGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAQFLPF*KTAAAG
Trigger: GCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTG...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTAAGCACATCAGAAGCTaGTCTGACTCGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAKHIRS*SDSLLE
Trigger: TTCCAACAGCGAGTCAGACCAGCTTCTGATGTGCTT...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATAGGGCAGGTGTATACTaGGACATAGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYRAGVY*DIASSP
Trigger: TGGAGAGGAAGCTATGTCCCAGTATACACCTGCCCT...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATATGAACTTGGCTGTGTaGGTCCCTGTCTCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYMNLAV*VPVSLH
Trigger: GTGCAAAGAGACAGGGACCCACACAGCCAAGTTCAT...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGGCGAGCTTTGGTCTTaGGGAATTCTGAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTGELWS*GILSYY
Trigger: ATAATAACTCAGAATTCCCCAAGACCAAAGCTCGCC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTGGGTTTGGCGAGCTTTaGTCTTGGGGAATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSGFGEL*SWGILS
Trigger: ACTCAGAATTCCCCAAGACCAAAGCTCGCCAAACCC...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTCTGACATCACTGGACTaGAAGAGACAAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSLTSLD*KRQEEQ
Trigger: CTGCTCCTCTTGTCTCTTCCAGTCCAGTGATGTCAG...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCTCTTCCATCATCTCTaGAGATGCTACATTCTAACG +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTLFHHL*RCYILT
Trigger: CGTTAGAATGTAGCATCTCCAGAGATGATGGAAGAG...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGCCTGGCCCTTCTGTTaGGGGTGTGGAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITAWPFC*GCGRLL
Trigger: GAGAAGCCTTCCACACCCCCAACAGAAGGGCCAGGC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATGGGGCCTTCCAGCATTaGGCAGATTATCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYGAFQH*ADYQML
Trigger: CAACATCTGATAATCTGCCCAATGCTGGAAGGCCCC...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTTTCCACTTTACTCTTaGAAGCTTCCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTFPLYS*KLPFSC
Trigger: GCAGGAGAATGGAAGCTTCCAAGAGTAAAGTGGAAA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTGGCAGAGGATGCCATaGAAGCGGCTGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLWQRMP*KRLAGE
Trigger: CTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCTGGCAGAGGATGCCATaGAAGCGGCTGGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLWQRMP*KRLAGE
Trigger: CTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCA...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCGCGGTCAAGGGTTTaGGCTCTGGCAGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLSRSRV*ALAEDA
Trigger: GGCATCCTCTGCCAGAGCCCAAACCCTTGACCGCGA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATGGGTCAGATATGGAATaGATGATCATGGACTCCGGG +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYGSDME*MIMDSG
Trigger: CCCGGAGTCCATGATCATCCATTCCATATCTGACCC...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTCTCTGGCCATCATGCTaGGGTCAGATATGGAATGGA +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSLWPSC*GQIWNG
Trigger: TCCATTCCATATCTGACCCCAGCATGATGGCCAGAG...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGATCCTGTTGCGCTCTaGCTCCAGGGTCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSADPVAL*LQGHLP
Trigger: CGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATGAATGTGGCTTTCTTTaGTACGGGTCGGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYECGFL*YGSEVV
Trigger: AACTACCTCCGACCCGTATCAAAGAAAGCCACATTC...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGGTTAAACAGACTGTCTaGAACACTGTGTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMVKQTV*NTVCQF
Trigger: AAATTGACACACAGTGTTTCAGACAGTCTGTTTAAC...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAAGAGGCACATGGCCATaGACTTGGCTGTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITRGTWP*TWLCGS
Trigger: GGACCCACACAGCCAAGTTCATGGCCATGTGCCTCT...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGGGAGCTGTGAGAATATaGTTTTCATCTTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMGAVRI*FSSFGM
Trigger: CATTCCAAAAGATGAAAATCATATTCTCACAGCTCC...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGGGAGCTGTGAGAATATaGTTTTCATCTTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEGAVRI*FSSFGM
Trigger: CATTCCAAAAGATGAAAATCATATTCTCACAGCTCC...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTTTCTTCTGTATTTCTaGCATCACTGGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTFLLYF*HHWTGR
Trigger: TCTTCCAGTCCAGTGATGTCAGAAATACAGAAGAAA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCGGACTCATTCACTCCTaGGAAGGAAGGCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLGLIHS*EGRPVG
Trigger: CCCCACAGGCCTTCCTTCTCAGGAGTGAATGAGTCC...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATGGGGACCCTTCCATTaGGATATTCTGTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGWGPFH*DILSGE
Trigger: CTCACCAGACAGAATATCTCAATGGAAGGGTCCCCA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTCAGATTATCAGATGTTaGGACAGAGGGGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSQIIRC*DRGGLA
Trigger: AGCAAGACCCCCTCTGTCTCAACATCTGATAATCTG...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGGGAAGGTGACTCTGTaGGGCTCTCATCTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITGKVTL*GSHLSG
Trigger: GCCAGAGAGATGAGAGCCTCACAGAGTCACCTTCCC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGAGCCAGTGTGAGCCTTTaGCTCTGCTCCATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGASVSL*LCSILL
Trigger: AAGCAAAATGGAGCAGAGTCAAAGGCTCACACTGGC...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCGCATCTGGATCCTGTTaGGCTCTGACTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCASGSC*ALTPGS
Trigger: TGACCCTGGAGTCAGAGCGCAACAGGATCCAGATGC...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTGAGATCACCCAGTGCTaGTTGCTCTTTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSEITQC*LLFSLF
Trigger: GAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTC...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATCTTCAGGAGCAGTCTaGTGTCTTCCTTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGSSGAV*CLPFPP
Trigger: AGGAGGGAAAGGAAGACAGCAGACTGCTCCTGAAGA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACTCTTCAGGAGCAGTCTaGTGTCTTCCTTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYSSGAV*CLPFPP
Trigger: AGGAGGGAAAGGAAGACAGCAGACTGCTCCTGAAGA...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACGAGGCAGACTTTGTCTaGACTTGGCCCTTTTCCACA +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYEADFV*TWPFST
Trigger: TGTGGAAAAGGGCCAAGTGCAGACAAAGTCTGCCTC...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATTCTCTCTGGCCATCATaGTGGGGTCAGATATGGAAT +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYSLWPS*WGQIWN
Trigger: ATTCCATATCTGACCCCAGCATGATGGCCAGAGAGA...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTTGCTCCCTGAGTTGTaGCAGCAGGTGCTCGATGCA +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCLLPEL*QQVLDA
Trigger: TGCATCGAGCACCTGCTGGCACAACTCAGGGAGCAA...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR GCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGACAGCGATAGCTCACTaGCACTGCTGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMTAIAH*HCCSCC
Trigger: GCAACAGCTGCAGCAGTGGCAGTGAGCTATCGCTGT...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCAGTACTCGCTGCAGGTaGTTGACAGCGATAGCTCAC +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHISTRCR*LTAIAH
Trigger: GTGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACT...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATCAGATCCGCGATGATTaGCTTTTCCCAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYQIRDD*LFPMSF
Trigger: GAAGCTCATTGGGAAAAGGCAATCATCGCGGATCTG...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTGCTCTGGAGATCCTTaGCTCTGCAACAGACTTCGG +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPCSGDP*LCNRLR
Trigger: CCGAAGTCTGTTGCAGAGCCAAGGATCTCCAGAGCA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGCTGGTTTTAATTCCTaGCGAATAGATCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTAGFNS*RIDPFI
Trigger: AATGAAGGGATCTATTCGCCAGGAATTAAAACCAGC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTTCAGGCATTTCTCTaGTATATACTGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHFQAFL*YILRLY
Trigger: GTACAGCCTCAGTATATACCAGAGAAATGCCTGAAA...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCCTGCTACTGAGAGCTaGAAGCCTGCTCTTTCGAAA +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYPATES*KPALSK
Trigger: TTTCGAAAGAGCAGGCTTCCAGCTCTCAGTAGCAGG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTTCTATCATGTGGCTCTaGAGAGTAGTGTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILASIMWL*RVVSAT
Trigger: AGTTGCTGACACTACTCTCCAGAGCCACATGATAGA...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp GGCCTCGTTGGATGCTTGACTTGCACAAGAGGAGAAACTGTCATACAGAGAGTCTCCAGTGTTCTCATCTaGCAGTTGGATTCTATCATG +
Preference number: 4 (lower is better)
Translates to: GLVGCLTCTRGETVIQRVSSVLI*QLDSIM
Trigger: CATGATAGAATCCAACTGCCAGATGAGAACACTGGA...GACTCTCTGTATGACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAACGAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAAGCTCTGGCTGTCTGTaGAGGAAGGCACTTCGCGGT +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITSSGCL*RKALRG
Trigger: ACCGCGAAGTGCCTTCCTCCACAGACAGCCAGAGCT...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTAGCTCTGGCTGTCTGTaGAGGAAGGCACTTCGCGGT +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLSSGCL*RKALRG
Trigger: ACCGCGAAGTGCCTTCCTCCACAGACAGCCAGAGCT...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGACTCTGGCCATCATGCTaGGGTCAGATATGGAATGGA +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGLWPSC*GQIWNG
Trigger: TCCATTCCATATCTGACCCCAGCATGATGGCCAGAG...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTCCTGATTTTGCATTCTaGAGGTGTTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSPDFAF*RCSWRS
Trigger: GCTTCTCCAGGAACACCTCCAGAATGCAAAATCAGG...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTGTAGGAGGAGCCACTaGAGTACTCGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLCRRSH*STRCRC
Trigger: GCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGCATCAGAAGCTGGTCTaGCTCGCTGTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMHQKLV*LAVGTG
Trigger: TCCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATG...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTTTCTCTGGTATATACTaGGGCTGTACCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAFSGIY*GCTFCK
Trigger: TTTGCAGAAGGTACAGCCTCAGTATATACCAGAGAA...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCCAGCAAGGGCTGAGCTaGTGGAAATTTCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCQQGLS*WKFHPW
Trigger: CCAGGGATGAAATTTCCATCAGCTCAGCCCTTGCTG...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTGAGGTGAAAGTTCAGTaGGTTCCTCTGAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLEVKVQ*VPLRAQ
Trigger: CTGGGCCCTCAGAGGAACTCACTGAACTTTCACCTC...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGGGTTCTCTCATCTCTTaGGGTCTCCAGACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMGSLIS*GLQTCR
Trigger: CCTGCAAGTCTGGAGACCTCAAGAGATGAGAGAACC...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACACTCCCAAGTGGATGCTaGAGCTCTGACTCCGAGCTT +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITLPSGC*SSDSEL
Trigger: AAGCTCGGAGTCAGAGCTTCAGCATCCACTTGGGAG...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACATTCTGTGTTGCTCCCTaGGTTGTGCCAGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITFCVAP*VVPAGA
Trigger: AGCACCTGCTGGCACAACTCAGGGAGCAACACAGAA...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR TCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTAGGGATGACAACCCCTaGGCCAGAGTGTTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLRDDNP*ARVFQG
Trigger: GCCTTGAAACACTCTGGCTCAGGGGTTGTCATCCCT...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACATTGCGAGGACAGAGGTaGTCAGGGATGACAACCCCT +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITLRGQR*SGMTTP
Trigger: AGGGGTTGTCATCCCTGATCACCTCTGTCCTCGCAA...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGCATCTGGATCCTGTTaGGCTCTGACTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITASGSC*ALTPGS
Trigger: TGACCCTGGAGTCAGAGCGCAACAGGATCCAGATGC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGATTCTGGAAAACTGCTaGTGCAGGCCGAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMILENC*CRPSIW
Trigger: CCAGATGCTCGGCCTGCAGCAGCAGTTTTCCAGAAT...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGAATGGAGATCACCCAGTaGTGCTTGCTCTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGMEITQ*CLLFSL
Trigger: GAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCAT...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGATCCTCATGAGAATTTaGATCATAGATGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEILMRI*IIDECL
Trigger: CAGACATTCATCTATGATGCAAATTCTCATGAGGAT...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTCGGTATCTGAGAGCTaGAGGTTCAGAGGCACATGG +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCSVSES*RFRGTW
Trigger: CCATGTGCCTCTGAACCTGCAGCTCTCAGATACCGA...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATCTCTCTGGCCATCATaGTGGGGTCAGATATGGAAT +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGSLWPS*WGQIWN
Trigger: ATTCCATATCTGACCCCAGCATGATGGCCAGAGAGA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTGTTGGATGCTTGACTTaGACAAGAGGAGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSVGCLT*TRGETV
Trigger: GACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAAC...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCACTGCTGCAGCTGTTaGGAGGACAGAGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLHCCSC*EDRGDQ
Trigger: CTGATCACCTCTGTCCTCGCAACAGCTGCAGCAGTG...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTGGTCTGACTCGCTGTTaGAACAGGAGGCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLGLTRC*NRRLSA
Trigger: AGCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACC...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCCCAGTTCTTCTTATTaGAAATTTTGGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTPSSSY*KFWGYE
Trigger: CTCATATCCCCAAAATTTCCAATAAGAAGAACTGGG...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTGAGTTTCAGGTTTaGCAGGTGATGGTAGTGGTG +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPPEFQV*QVMVVV
Trigger: CACCACTACCATCACCTGCCAAACCTGAAACTCAGG...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCGGAAGGCAGACTTTCTaGAGGCCACAGATGGTTTCT +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHIGRQTF*RPQMVS
Trigger: AGAAACCATCTGTGGCCTCCAGAAAGTCTGCCTTCC...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACAGTCGTCACAGCAAATaGACTGGAGGCTATGTGTTC +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYSRHSK*TGGYVF
Trigger: GAACACATAGCCTCCAGTCCATTTGCTGTGACGACT...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCAAGTCTGTGTCCATGTaGGCAGTTCCTAGTGCATGG +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPKSVSM*AVPSAW
Trigger: CCATGCACTAGGAACTGCCCACATGGACACAGACTT...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGAAACTTTGAGTCCTACTaGGAGGCGAGTTTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGNFESY*EASFRS
Trigger: GGACCTAAAACTCGCCTCCCAGTAGGACTCAAAGTT...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACACAAGGGTTTGGGCTCTaGCAGAGGATGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITQGFGL*QRMPWK
Trigger: CTTCCATGGCATCCTCTGCCAGAGCCCAAACCCTTG...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCCTCTGGCCATCATGCTaGGGTCAGATATGGAATGGA +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHILWPSC*GQIWNG
Trigger: TCCATTCCATATCTGACCCCAGCATGATGGCCAGAG...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCTCGTGCATGGCCCCTTaGCTTGTCCTTTGGGCAACT +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLSCMAP*LVLWAT
Trigger: AGTTGCCCAAAGGACAAGCCAAGGGGCCATGCACGA...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCGTGCATGGCCCCTTaGCTTGTCCTTTGGGCAACT +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLSCMAP*LVLWAT
Trigger: AGTTGCCCAAAGGACAAGCCAAGGGGCCATGCACGA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATTCTGGAGGTGTTCCTaGAGAAGCACATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGFWRCS*RSTSEA
Trigger: AGCTTCTGATGTGCTTCTCCAGGAACACCTCCAGAA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATTCAGATCCTTTTGAGTaGGTAGAGCTCGAACAACTT +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYSDPFE*VELEQL
Trigger: AAGTTGTTCGAGCTCTACTCACTCAAAAGGATCTGA...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCGAATGTGGCTTTCTTTaGTACGGGTCGGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPECGFL*YGSEVV
Trigger: AACTACCTCCGACCCGTATCAAAGAAAGCCACATTC...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCATTGTCATCGGTATCTaGGAGCTGCAGGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCIVIGI*ELQVQR
Trigger: CCTCTGAACCTGCAGCTCTCAGATACCGATGACAAT...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTTTGGATTTCTGAGGTaGAGACTTGCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPFGFLR*RLASGR
Trigger: CCTTCCAGAGGCAAGTCTTCACCTCAGAAATCCAAA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCCAAGGAAGTTTTCTTaGGCAACTGAGGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYPRKFS*ATEETS
Trigger: TGAAGTCTCCTCAGTTGCTCAAGAAAACTTCCTTGG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGACCAAGGAAGTTTTCTTaGGCAACTGAGGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGPRKFS*ATEETS
Trigger: TGAAGTCTCCTCAGTTGCTCAAGAAAACTTCCTTGG...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTTTTTCCACATTCTCCTaGATGCACAACATGACCTTT +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILAFSTFS*MHNMTF
Trigger: AAAGGTCATGTTGTGCATTCAGGAGAATGTGGAAAA...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGGCAGGAAACACCCTTTaGTCCACTCTCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMAGNTL*STLSLY
Trigger: GTACAGAGAGAGAGTGGATCAAAGGGTGTTTCCTGC...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACACTTGTACATCTTCATTaGCCTCGGCCCCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITLVHLH*PRPPGE
Trigger: TTCTCCAGGGGGCCGAGGTCAATGAAGATGTACAAG...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACTCACCCAGTGCTGCTTaGTCTTTTCTCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYSPSAA*SFLSSS
Trigger: TGATGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGA...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCGAGATCACCCAGTGCTaGTTGCTCTTTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHIEITQC*LLFSLF
Trigger: GAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTC...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCTTCATTCGAGTTCATaGAATCTTTATAACCCCATT +
Preference number: 4 (lower is better)
Translates to: SASLESVCLVHHACRSLTLHSSS*NLYNPI
Trigger: AATGGGGTTATAAAGATTGCATGAACTCGAATGAAG...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATGGCTCTGCTGTCTaGCCCATCTCTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCYGSAV*PISSII
Trigger: GATGATGGAAGAGATGGGGCAGACAGCAGAGCCATA...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGAATCTTTTTATGGCTCTaGTGTCTGCCCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGIFLWL*CLPHLF
Trigger: GAAGAGATGGGGCAGACAGCAGAGCCATAAAAAGAT...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCGCTTTAGGTGTGGCTTaGTGGAGGAGAAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPALGVA*WRRRIF
Trigger: AAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGC...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCGCTTTAGGTGTGGCTTaGTGGAGGAGAAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHIALGVA*WRRRIF
Trigger: AAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGC...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTCTCTCTGGCCATCATaGTGGGGTCAGATATGGAAT +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPSLWPS*WGQIWN
Trigger: ATTCCATATCTGACCCCAGCATGATGGCCAGAGAGA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATTGTATTCCACAAGACTaGTGTCCAGAGAGAGTCTTT +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYCIPQD*CPERVF
Trigger: AAAGACTCTCTCTGGACAGCAGTCTTGTGGAATACA...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR GCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTGTATCAGCTTCTCGTaGATGGCCCCTTGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLCISFS*MAPWLV
Trigger: GACAAGCCAAGGGGCCATGCACGAGAAGCTGATACA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATTCCTTTTTCTGCTCTaGAGATCCTTGGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGFLFLL*RSLALQ
Trigger: TTGCAGAGCCAAGGATCTCCAGAGCAGAAAAAGGAA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCTCGAACAACTTGGTTaGCTACCTCATCAAGACATC +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYLEQLG*LPHQDI
Trigger: GATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGAAGAGCTCGAACAACTTaGTTGGCTACCTCATCAAGA +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGRARTT*LATSSR
Trigger: TCTTGATGAGGTAGCCAACCAAGTTGTTCGAGCTCT...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGAGGGCAGGTGTATACTaGGACATAGCTTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMRAGVY*DIASSP
Trigger: TGGAGAGGAAGCTATGTCCCAGTATACACCTGCCCT...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCATGAACTTGGCTGTGTaGGTCCCTGTCTCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCMNLAV*VPVSLH
Trigger: GTGCAAAGAGACAGGGACCCACACAGCCAAGTTCAT...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACGTGAAGACTTGCCTCTaGAAGGGATTTTTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYVKTCL*KGFLSD
Trigger: GTCTGACAAAAATCCCTTCCAGAGGCAAGTCTTCAC...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCAGAGACACAGCCATTaGACCTCATTTCACTACTGT +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYQRHSH*TSFHYC
Trigger: ACAGTAGTGAAATGAGGTCCAATGGCTGTGTCTCTG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCTCACAGCAAATGGACTaGAGGCTATGTGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHISQQMD*RLCVQG
Trigger: ACCCTGAACACATAGCCTCCAGTCCATTTGCTGTGA...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCCCTTGTGAGGACCCTTaGTTTCTACAGGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHIPCEDP*FLQDEE
Trigger: TTCCTCATCCTGTAGAAACCAAGGGTCCTCACAAGG...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTTTAGGTGTGGCTTGCTaGAGGAGAAGGATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSLGVAC*RRRIFL
Trigger: TAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAA...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCGGGGCCTTCCAGCATTaGGCAGATTATCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCGAFQH*ADYQML
Trigger: CAACATCTGATAATCTGCCCAATGCTGGAAGGCCCC...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCCCTGCTACTGAGAGCTaGAAGCCTGCTCTTTCGAAA +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCPATES*KPALSK
Trigger: TTTCGAAAGAGCAGGCTTCCAGCTCTCAGTAGCAGG...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTTTTCCACTTTACTCTTaGAAGCTTCCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSFPLYS*KLPFSC
Trigger: GCAGGAGAATGGAAGCTTCCAAGAGTAAAGTGGAAA...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACTCTATCATGTGGCTCTaGAGAGTAGTGTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYSIMWL*RVVSAT
Trigger: AGTTGCTGACACTACTCTCCAGAGCCACATGATAGA...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTTCCAGTGTTCTCATCTaGCAGTTGGATTCTATCATG +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSSSVLI*QLDSIM
Trigger: CATGATAGAATCCAACTGCCAGATGAGAACACTGGA...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTGGCATCAGTGTCCTCTaGAGAGTCCTGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLGISVL*RVLLAY
Trigger: ATATGCCAGCAGGACTCTCCAGAGGACACTGATGCC...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGCTCTGGCCATCATGCTaGGGTCAGATATGGAATGGA +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMLWPSC*GQIWNG
Trigger: TCCATTCCATATCTGACCCCAGCATGATGGCCAGAG...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTACTGTGCTCGCTTCTTaGGTCCTCATCAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSATVLAS*VLISCH
Trigger: GTGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGT...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATCAGATCCTTTTGAGTaGGTAGAGCTCGAACAACTT +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGSDPFE*VELEQL
Trigger: AAGTTGTTCGAGCTCTACTCACTCAAAAGGATCTGA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCACAAGTTTGGATTTCTaGGGTGAAGACTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHITSLDF*GEDLPL
Trigger: CAGAGGCAAGTCTTCACCTCAGAAATCCAAACTTGT...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTACTTTCAGACTCTCTaGGCTTTGCAGACCATCGTC +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCYFQTL*ALQTIV
Trigger: GACGATGGTCTGCAAAGCTCAGAGAGTCTGAAAGTA...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCGCAGGAAACACCCTTTaGTCCACTCTCTCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLAGNTL*STLSLY
Trigger: GTACAGAGAGAGAGTGGATCAAAGGGTGTTTCCTGC...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGCCAGTGTGAGCCTTTaGCTCTGCTCCATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITASVSL*LCSILL
Trigger: AAGCAAAATGGAGCAGAGTCAAAGGCTCACACTGGC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTAGGGATGACAACCCCTaGGCCAGAGTGTTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSARDDNP*ARVFQG
Trigger: GCCTTGAAACACTCTGGCTCAGGGGTTGTCATCCCT...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGATGGAGATCACCCAGTaGTGCTTGCTCTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMMEITQ*CLLFSL
Trigger: GAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCAT...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTCTTTATAACCCCATTTaGTTATCACCAATGATGGTG +
Preference number: 4 (lower is better)
Translates to: SRGDLYQSTREVNSGILALYNPI*LSPMMV
Trigger: CACCATCATTGGTGATAAGCAAATGGGGTTATAAAG...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACTGTGTGTCAATTTACTaGCCTGTATTCTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYCVSIY*PVFCSP
Trigger: AGGGCTACAGAATACAGGGCAGTAAATTGACACACA...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGAAAAGGACAGTCTCTTaGAGTAGCTCCTGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMKRTVS*SSSCLE
Trigger: TTCCAGGCAGGAGCTACTGCAAGAGACTGTCCTTTT...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCTTTTTATGGCTCTaGTGTCTGCCCCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHIIFLWL*CLPHLF
Trigger: GAAGAGATGGGGCAGACAGCAGAGCCATAAAAAGAT...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCCAGATCCGCGATGATTaGCTTTTCCCAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCQIRDD*LFPMSF
Trigger: GAAGCTCATTGGGAAAAGGCAATCATCGCGGATCTG...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCAGAGCTCGAACAACTTaGTTGGCTACCTCATCAAGA +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPRARTT*LATSSR
Trigger: TCTTGATGAGGTAGCCAACCAAGTTGTTCGAGCTCT...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCAAGCACATCAGAAGCTaGTCTGACTCGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCKHIRS*SDSLLE
Trigger: TTCCAACAGCGAGTCAGACCAGCTTCTGATGTGCTT...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCGCTGGCGAAGCCACTTaGGAGCGAAGAATCAATACT +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLAGEAT*ERRINT
Trigger: AGTATTGATTCTTCGCTCCCAAGTGGCTTCGCCAGC...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTGGGTTTGGCGAGCTTTaGTCTTGGGGAATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLGFGEL*SWGILS
Trigger: ACTCAGAATTCCCCAAGACCAAAGCTCGCCAAACCC...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCTGTCTTTTTCTCCCTaGAGACAGGCTTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYLSFSP*RQAFTR
Trigger: TCTTGTAAAAGCCTGTCTCCAGGGAGAAAAAGACAG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCAGAAGGATCTTTTTATaGCTCTGCTGTCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPRRIFL*LCCLPH
Trigger: ATGGGGCAGACAGCAGAGCCATAAAAAGATCCTTCT...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGATCCAGTGTTCTCATCTaGCAGTTGGATTCTATCATG +
Preference number: 4 (lower is better)
Translates to: YQSTREVNSGILAISFSGSSVLI*QLDSIM
Trigger: CATGATAGAATCCAACTGCCAGATGAGAACACTGGA...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTTTGGATTTCTGAGGTaGAGACTTGCCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLFGFLR*RLASGR
Trigger: CCTTCCAGAGGCAAGTCTTCACCTCAGAAATCCAAA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGACAAGTTTGGATTTCTaGGGTGAAGACTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMTSLDF*GEDLPL
Trigger: CAGAGGCAAGTCTTCACCTCAGAAATCCAAACTTGT...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGGTTCTCTCATCTCTTaGGGTCTCCAGACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAGSLIS*GLQTCR
Trigger: CCTGCAAGTCTGGAGACCTCAAGAGATGAGAGAACC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGAGATCACCCAGTGCTaGTTGCTCTTTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITEITQC*LLFSLF
Trigger: GAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATCTTTATAACCCCATTTaGTTATCACCAATGATGGTG +
Preference number: 4 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYLYNPI*LSPMMV
Trigger: CACCATCATTGGTGATAAGCAAATGGGGTTATAAAG...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTGTGTGTCAATTTACTaGCCTGTATTCTGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPCVSIY*PVFCSP
Trigger: AGGGCTACAGAATACAGGGCAGTAAATTGACACACA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTGAAAGAGGAGATGGATaGCTATGGTGGTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLERGDG*LWWSLL
Trigger: TAGCAGTGACCACCATAGGCATCCATCTCCTCTTTC...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGAAAGAGGAGATGGATaGCTATGGTGGTCACTGCTA +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITERGDG*LWWSLL
Trigger: TAGCAGTGACCACCATAGGCATCCATCTCCTCTTTC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGGAAGAAGCATCTGGATaGCTTCCAGAAGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMEEASG*LPEVSS
Trigger: GCTAGAAACTTCTGGAAGGCATCCAGATGCTTCTTC...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCCTCGAACAACTTGGTTaGCTACCTCATCAAGACATC +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCLEQLG*LPHQDI
Trigger: GATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAG...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGAGAGCTCGAACAACTTaGTTGGCTACCTCATCAAGA +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMRARTT*LATSSR
Trigger: TCTTGATGAGGTAGCCAACCAAGTTGTTCGAGCTCT...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAAAGCACATCAGAAGCTaGTCTGACTCGCTGTTGGAA +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITKHIRS*SDSLLE
Trigger: TTCCAACAGCGAGTCAGACCAGCTTCTGATGTGCTT...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTCCCAGTTCTTCTTATTaGAAATTTTGGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSPSSSY*KFWGYE
Trigger: CTCATATCCCCAAAATTTCCAATAAGAAGAACTGGG...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCCTGTCTTTTTCTCCCTaGAGACAGGCTTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHILSFSP*RQAFTR
Trigger: TCTTGTAAAAGCCTGTCTCCAGGGAGAAAAAGACAG...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTAACTTTGAGTCCTACTaGGAGGCGAGTTTTAGGTCC +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLNFESY*EASFRS
Trigger: GGACCTAAAACTCGCCTCCCAGTAGGACTCAAAGTT...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCCTCTTCCATCATCTCTaGAGATGCTACATTCTAACG +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHILFHHL*RCYILT
Trigger: CGTTAGAATGTAGCATCTCCAGAGATGATGGAAGAG...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTTAGGTGTGGCTTGCTaGAGGAGAAGGATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPLGVAC*RRRIFL
Trigger: TAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCTTCTCATCTGGCAGTTaGATTCTATCATGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHIFSSGS*ILSCGS
Trigger: AGAGCCACATGATAGAATCCAACTGCCAGATGAGAA...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGGCATCAGTGTCCTCTaGAGAGTCCTGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAGISVL*RVLLAY
Trigger: ATATGCCAGCAGGACTCTCCAGAGGACACTGATGCC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCTTCTGGAGGTGTTCCTaGAGAAGCACATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLFWRCS*RSTSEA
Trigger: AGCTTCTGATGTGCTTCTCCAGGAACACCTCCAGAA...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTCAGATCCTTTTGAGTaGGTAGAGCTCGAACAACTT +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCSDPFE*VELEQL
Trigger: AAGTTGTTCGAGCTCTACTCACTCAAAAGGATCTGA...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGGTCTTGGGGAATTCTaGGTTATTATAGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITGLGEF*VIIVWE
Trigger: CTCCCAGACTATAATAACTCAGAATTCCCCAAGACC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCTTTCTTCTGTATTTCTaGCATCACTGGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHIFLLYF*HHWTGR
Trigger: TCTTCCAGTCCAGTGATGTCAGAAATACAGAAGAAA...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTTGGGGACCCTTCCATTaGGATATTCTGTCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAWGPFH*DILSGE
Trigger: CTCACCAGACAGAATATCTCAATGGAAGGGTCCCCA...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCACCCAGTGCTGCTTaGTCTTTTCTCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLSPSAA*SFLSSS
Trigger: TGATGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR GCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGTGGCTCTCCATTTTCTaGATCAAATATGACCGTGAC +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMWLSIF*IKYDRD
Trigger: GTCACGGTCATATTTGATGCAGAAAATGGAGAGCCA...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCTCTGAGGTGAAGACTTaGCTCTGGAAGGGATTTTTG +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLSEVKT*LWKGFL
Trigger: CAAAAATCCCTTCCAGAGGCAAGTCTTCACCTCAGA...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACATTCCTTTTTCTGCTCTaGAGATCCTTGGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITFLFLL*RSLALQ
Trigger: TTGCAGAGCCAAGGATCTCCAGAGCAGAAAAAGGAA...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCGCTGGTTTTAATTCCTaGCGAATAGATCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPAGFNS*RIDPFI
Trigger: AATGAAGGGATCTATTCGCCAGGAATTAAAACCAGC...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCAAAGTACTTCCTATGTaGCTCCCAGTTAAACAGACT +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHIKVLPM*LPVKQT
Trigger: AGTCTGTTTAACTGGGAGCCACATAGGAAGTACTTT...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTTTCAGGCATTTCTCTaGTATATACTGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: NASFQEHGANSFYCYLSPFQAFL*YILRLY
Trigger: GTACAGCCTCAGTATATACCAGAGAAATGCCTGAAA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCGTGAAGACTTGCCTCTaGAAGGGATTTTTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLVKTCL*KGFLSD
Trigger: GTCTGACAAAAATCCCTTCCAGAGGCAAGTCTTCAC...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCTCTTATTGGAAATTTTaGGGATATGAGGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: WCHLISAHTLILQQNTHISYWKF*GYEEPG
Trigger: CCCAGGTTCCTCATATCCCCAAAATTTCCAATAAGA...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTCTGACATCACTGGACTaGAAGAGACAAGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSALTSLD*KRQEEQ
Trigger: CTGCTCCTCTTGTCTCTTCCAGTCCAGTGATGTCAG...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGTTCTCATCTGGCAGTTaGATTCTATCATGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMFSSGS*ILSCGS
Trigger: AGAGCCACATGATAGAATCCAACTGCCAGATGAGAA...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTTCTCATCTGGCAGTTaGATTCTATCATGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LLELNASFQEHGANSFYCFSSGS*ILSCGS
Trigger: AGAGCCACATGATAGAATCCAACTGCCAGATGAGAA...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTTCTCTGGTATATACTaGGGCTGTACCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLFSGIY*GCTFCK
Trigger: TTTGCAGAAGGTACAGCCTCAGTATATACCAGAGAA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTGGCTCTCCATTTTCTaGATCAAATATGACCGTGAC +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLWLSIF*IKYDRD
Trigger: GTCACGGTCATATTTGATGCAGAAAATGGAGAGCCA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCCAGTGTTCTCATCTaGCAGTTGGATTCTATCATG +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLSSVLI*QLDSIM
Trigger: CATGATAGAATCCAACTGCCAGATGAGAACACTGGA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
3UTR CAA 72 bp CCCCACGCTTCCATTGACAGTATATGCACAAATGAGTaGAGGACCAAGATGATTATGTTCACAAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: PHASIDSICTNE*RTKMIMFTKSS
Trigger: TGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATATACTGTCAATGGAAGCGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGGTCTTGGGGAATTCTaGGTTATTATAGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAGLGEF*VIIVWE
Trigger: CTCCCAGACTATAATAACTCAGAATTCCCCAAGACC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTAGAGCTCGAACAACTTaGTTGGCTACCTCATCAAGA +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSARARTT*LATSSR
Trigger: TCTTGATGAGGTAGCCAACCAAGTTGTTCGAGCTCT...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAAAAGTACTTCCTATGTaGCTCCCAGTTAAACAGACT +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITKVLPM*LPVKQT
Trigger: AGTCTGTTTAACTGGGAGCCACATAGGAAGTACTTT...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCAAGGATTCTCTTaGTTTTTCCATATCGACTTT +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLPQGFS*FFHIDF
Trigger: AAAGTCGATATGGAAAAACCAAGAGAATCCTTGGGG...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTTCTATCATGTGGCTCTaGAGAGTAGTGTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSASIMWL*RVVSAT
Trigger: AGTTGCTGACACTACTCTCCAGAGCCACATGATAGA...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR TCA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCGTTAAACAGACTGTCTaGAACACTGTGTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLVKQTV*NTVCQF
Trigger: AAATTGACACACAGTGTTTCAGACAGTCTGTTTAAC...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR TCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGTGTTTTGGAATGTGTaGTTCTGGCTGTACATCACA +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAVFWNV*FWLYIT
Trigger: TGTGATGTACAGCCAGAATCACACATTCCAAAACAC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTCTTCATTCGAGTTCATaGAATCTTTATAACCCCATT +
Preference number: 4 (lower is better)
Translates to: ELNASFQEHGANSFYCYLLHSSS*NLYNPI
Trigger: AATGGGGTTATAAAGATTGCATGAACTCGAATGAAG...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR GCA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAATCCTCATGAGAATTTaGATCATAGATGAATGTCTG +
Preference number: 4 (lower is better)
Translates to: HLISAHTLILQQNTHIITILMRI*IIDECL
Trigger: CAGACATTCATCTATGATGCAAATTCTCATGAGGAT...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CCA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTCCCCAAGGATTCTCTTaGTTTTTCCATATCGACTTT +
Preference number: 4 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAPQGFS*FFHIDF
Trigger: AAAGTCGATATGGAAAAACCAAGAGAATCCTTGGGG...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp GGCTGTCTGTGGAGGAAGGCACTTCGCGGTCAAGGGTTTGGGCTCTaGCAGAGGATGCCATGGAAGCGGCTGGCTGGAGAGGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GCLWRKALRGQGFGL*QRMPWKRLAGEAGG
Trigger: CCCTCCTGCCTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCAGAGCCCAAACCCTTGACCGCGAAGTGCCTTCCTCCACAGACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 90 bp GAGCTCTGGCTGTCTGTGGAGGAAGGCACTTCGCGGTCAAGGGTTTaGGCTCTGGCAGAGGATGCCATGGAAGCGGCTGGCTGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: ELWLSVEEGTSRSRV*ALAEDAMEAAGWRG
Trigger: GCCTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCAGAGCCCAAACCCTTGACCGCGAAGTGCCTTCCTCCACAGACAGCCAGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 90 bp TCAAGGGTTTGGGCTCTGGCAGAGGATGCCATGGAAGCGGCTGGCTaGAGAGGCAGGAGGGCATCAGTGTCCTCTGGAGAGTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SRVWALAEDAMEAAG*RGRRASVSSGESCW
Trigger: CCAGCAGGACTCTCCAGAGGACACTGATGCCCTCCTGCCTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCAGAGCCCAAACCCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 90 bp GCATGGCCCCTTGGCTTGTCCTTTGGGCAACTTCTCTCTGCAGCCTaGCCACAGCCAGCTTCTCCCGCCAGAGACTTCTGTGTTGCTCCC +
Preference number: 5 (lower is better)
Translates to: AWPLGLSFGQLLSAA*PQPASPARDFCVAP
Trigger: GGGAGCAACACAGAAGTCTCTGGCGGGAGAAGCTGGCTGTGGCCAGGCTGCAGAGAGAAGTTGCCCAAAGGACAAGCCAAGGGGCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS GCA 90 bp CTTGAGTGCTCACAGAGCCGCTGGCGAAACAGGAGCCCTGGGAGGTaGCCTCTAACACGCTCCTGCAGGAAACACCCTTTGATCCACTCT +
Preference number: 5 (lower is better)
Translates to: LECSQSRWRNRSPGR*PLTRSCRKHPLIHS
Trigger: AGAGTGGATCAAAGGGTGTTTCCTGCAGGAGCGTGTTAGAGGGCACCTCCCAGGGCTCCTGTTTCGCCAGCGGCTCTGTGAGCACTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp TTCTCGTGCATGGCCCCTTGGCTTGTCCTTTGGGCAACTTCTCTCTaGAGCCTGGCCACAGCCAGCTTCTCCCGCCAGAGACTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: FSCMAPWLVLWATSL*SLATASFSRQRLLC
Trigger: ACACAGAAGTCTCTGGCGGGAGAAGCTGGCTGTGGCCAGGCTGCAGAGAGAAGTTGCCCAAAGGACAAGCCAAGGGGCCATGCACGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS GCA 90 bp TGTCTTGCCACGTGTAGGAGGAGCCACTGGAGTACTCGCTGCAGGTaGTTGACAGCGATAGCTCACTGCCACTGCTGCAGCTGTTGCGAG +
Preference number: 5 (lower is better)
Translates to: CLATCRRSHWSTRCR*LTAIAHCHCCSCCE
Trigger: CTCGCAACAGCTGCAGCAGTGGCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACACGTGGCAAGACA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp GCTTCCTGTCTTGCCACGTGTAGGAGGAGCCACTGGAGTACTCGCTaGAGGTGCTTGACAGCGATAGCTCACTGCCACTGCTGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: ASCLATCRRSHWSTR*RCLTAIAHCHCCSC
Trigger: ACAGCTGCAGCAGTGGCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACACGTGGCAAGACAGGAAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp ACAGTTTCTTCCATTCTGGAAAACTGCTGCTGCAGGCCGAGCATCTaGATCCTGTTGCGCTCTGACTCCAGGGTCACCTCCCGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: TVSSILENCCCRPSI*ILLRSDSRVTSRSR
Trigger: GCGGCTGCGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATCCAGATGCTCGGCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS TCA 90 bp AGCGATAGCTCACTGCCACTGCTGCAGCTGTTGCGAGGACAGAGGTaGTCAGGGATGACAACCCCTGAGCCAGAGTGTTTCAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SDSSLPLLQLLRGQR*SGMTTPEPECFKAG
Trigger: CCCTGCCTTGAAACACTCTGGCTCAGGGGTTGTCATCCCTGATCACCTCTGTCCTCGCAACAGCTGCAGCAGTGGCAGTGAGCTATCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp TGCAGCCTGGCCACAGCCAGCTTCTCCCGCCAGAGACTTCTGTGTTaGTCCCTGAGTTGTGCCAGCAGGTGCTCGATGCATTTGTTAGAG +
Preference number: 5 (lower is better)
Translates to: CSLATASFSRQRLLC*SLSCASRCSMHLLE
Trigger: CTCTAACAAATGCATCGAGCACCTGCTGGCACAACTCAGGGAGCAACACAGAAGTCTCTGGCGGGAGAAGCTGGCTGTGGCCAGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS CCA 90 bp GGACTGGAGGCTATGTGTTCAGGGTATCTGGTGTGCACTACCGCTTaGGTTGAGGGAAGAGCTGGAGGGAAGGCAGACTTTCTGGAGGCC +
Preference number: 5 (lower is better)
Translates to: GLEAMCSGYLVCTTA*VEGRAGGKADFLEA
Trigger: GGCCTCCAGAAAGTCTGCCTTCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTGCACACCAGATACCCTGAACACATAGCCTCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp CTGGGGTCAGATATGGAATGGATGATCATGGACTCCGGGGAGCTCTaGCTGTCTGTGGAGGAAGGCACTTCGCGGTCAAGGGTTTGGGCT +
Preference number: 5 (lower is better)
Translates to: LGSDMEWMIMDSGEL*LSVEEGTSRSRVWA
Trigger: AGCCCAAACCCTTGACCGCGAAGTGCCTTCCTCCACAGACAGCCAGAGCTCCCCGGAGTCCATGATCATCCATTCCATATCTGACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 90 bp AACTCATGTATCAGCTTCTCGTGCATGGCCCCTTGGCTTGTCCTTTaGGCAACTTCTCTCTGCAGCCTGGCCACAGCCAGCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: NSCISFSCMAPWLVL*ATSLCSLATASFSR
Trigger: GCGGGAGAAGCTGGCTGTGGCCAGGCTGCAGAGAGAAGTTGCCCAAAGGACAAGCCAAGGGGCCATGCACGAGAAGCTGATACATGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS-3UTR CAA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGATCTCCCTGGAGGGGTaGGAGGGGAGGGAGACCTCA +
Preference number: 5 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMISLEG*EGRETS
Trigger: TGAGGTCTCCCTCCCCTCCAACCCCTCCAGGGAGAT...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGCATGGCCCCTTGGCTaGTCCTTTGGGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAAWPLG*SFGQLL
Trigger: GAGAAGTTGCCCAAAGGACAAGCCAAGGGGCCATGC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS TCA 90 bp TTGTCATCGGTATCTGAGAGCTGCAGGTTCAGAGGCACATGGCCATaGACTTGGCTGTGTGGGTCCCTGTCTCTTTGCACCCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LSSVSESCRFRGTWP*TWLCGSLSLCTQGR
Trigger: CCTGCCCTGGGTGCAAAGAGACAGGGACCCACACAGCCAAGTTCATGGCCATGTGCCTCTGAACCTGCAGCTCTCAGATACCGATGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp GGAGGCTATGTGTTCAGGGTATCTGGTGTGCACTACCGCTTGGGTTaGGGGAAGAGCTGGAGGGAAGGCAGACTTTCTGGAGGCCACAGA +
Preference number: 5 (lower is better)
Translates to: GGYVFRVSGVHYRLG*GKSWREGRLSGGHR
Trigger: TCTGTGGCCTCCAGAAAGTCTGCCTTCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTGCACACCAGATACCCTGAACACATAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp CACTGCCACTGCTGCAGCTGTTGCGAGGACAGAGGTGATCAGGGATaGCAACCCCTGAGCCAGAGTGTTTCAAGGCAGGGGTTCCTGATT +
Preference number: 5 (lower is better)
Translates to: HCHCCSCCEDRGDQG*QPLSQSVSRQGFLI
Trigger: AATCAGGAACCCCTGCCTTGAAACACTCTGGCTCAGGGGTTGTCATCCCTGATCACCTCTGTCCTCGCAACAGCTGCAGCAGTGGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGGCACTACCGCTTGGGTaGAGGGAAGAGCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMALPLG*REELEG
Trigger: TCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTGC...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp GTTGGGGGTGTGGAAGGCTTCTCTCCCAAGTGGATGCTGAAGCTCTaGCTCCGAGCTTTGGCTCCATTCATGCCTAGAGCAGGCTTTAGG +
Preference number: 5 (lower is better)
Translates to: VGGVEGFSPKWMLKL*LRALAPFMPRAGFR
Trigger: CCTAAAGCCTGCTCTAGGCATGAATGGAGCCAAAGCTCGGAGTCAGAGCTTCAGCATCCACTTGGGAGAGAAGCCTTCCACACCCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp TCCAAATTGCTTGGGCGCTGCATCCTCCCTGGAACGTGCAGGAACTaGGGGCAGTCTGAAAGAGGAGATGGATGCCTATGGTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: SKLLGRCILPGTCRN*GQSERGDGCLWWSL
Trigger: CAGTGACCACCATAGGCATCCATCTCCTCTTTCAGACTGCCCTCAGTTCCTGCACGTTCCAGGGAGGATGCAGCGCCCAAGCAATTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp CTGAATTCTCCGCCTCCAGGGCCTTCAGTCTCTTCAGGAGCAGTCTaGTGTCTTCCTTTCCCTCCTCCACACTACTGTGCTCGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LNSPPPGPSVSSGAV*CLPFPPPHYCARFL
Trigger: CAAGAAGCGAGCACAGTAGTGTGGAGGAGGGAAAGGAAGACAGCAGACTGCTCCTGAAGAGACTGAAGGCCCTGGAGGCGGAGAATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 90 bp GACAAGAGGAGCAGAGGATCCTTTCAACAGCGGGGATTTCAACCCTaGACTTACAGCGTCTCCAGGGCCCTGAGTTTCAGGTTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: DKRSRGSFQQRGFQP*TYSVSRALSFRFGR
Trigger: CCTGCCAAACCTGAAACTCAGGGCCCTGGAGACGCTGTAAGTCCAGGGTTGAAATCCCCGCTGTTGAAAGGATCCTCTGCTCCTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp GGCCTTGTGAGCATCCTCAAGGGTAACTTGCTTGGGCTTCCGTGCTaGCTGCTAGAACTTCCGGTGCTACAGAGAGAACTCTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: GLVSILKGNLLGLPC*LLELPVLQRELCLE
Trigger: TTCCAGGCAGAGTTCTCTCTGTAGCACCGGAAGTTCTAGCAGCCAGCACGGAAGCCCAAGCAAGTTACCCTTGAGGATGCTCACAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp GAGGCTCTCATCTCTCTGGCCATCATGCTGGGGTCAGATATGGAATaGATGATCATGGACTCCGGGGAGCTCTGGCTGTCTGTGGAGGAA +
Preference number: 5 (lower is better)
Translates to: EALISLAIMLGSDME*MIMDSGELWLSVEE
Trigger: TTCCTCCACAGACAGCCAGAGCTCCCCGGAGTCCATGATCATCCATTCCATATCTGACCCCAGCATGATGGCCAGAGAGATGAGAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 90 bp TACATCTTCATTGACCTCGGCCCCCTGGAGAAGCACATCAGAAGCTaGTCTGACTCGCTGTTGGAACAGGAGGCTGAGTGCTCGGTTCTG +
Preference number: 5 (lower is better)
Translates to: YIFIDLGPLEKHIRS*SDSLLEQEAECSVL
Trigger: CAGAACCGAGCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATGTGCTTCTCCAGGGGGCCGAGGTCAATGAAGATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTGGGTCCCTGTCTCTTaGCACCCAGGGCAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEWVPVS*HPGQVY
Trigger: ATACACCTGCCCTGGGTGCAAAGAGACAGGGACCCA...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp TCCGCTTCTGTAGCTTCCTCAGTCCCTCTAGAATGTGGCTTTCTTTaGTACGGGTCGGAGGTAGTTCATCTGCAGGGCTGGCGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: SASVASSVPLECGFL*YGSEVVHLQGWRSH
Trigger: GTGGCTTCGCCAGCCCTGCAGATGAACTACCTCCGACCCGTATCAAAGAAAGCCACATTCTAGAGGGACTGAGGAAGCTACAGAAGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp TGTCTGGTGAGGGAGTTGCCTCTTTCAGCCGTGTTGGTGATAATCTaGGTTCGAATCTTGCCTGGCCCTTCTGTTGGGGGTGTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: CLVRELPLSAVLVII*VRILPGPSVGGVEG
Trigger: GCCTTCCACACCCCCAACAGAAGGGCCAGGCAAGATTCGAACTCAGATTATCACCAACACGGCTGAAAGAGGCAACTCCCTCACCAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp TGCAACAGACTTCGGACAGTTTCTTCCATTCTGGAAAACTGCTGCTaGAGGCCGAGCATCTGGATCCTGTTGCGCTCTGACTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CNRLRTVSSILENCC*RPSIWILLRSDSRV
Trigger: GACCCTGGAGTCAGAGCGCAACAGGATCCAGATGCTCGGCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS GCA 90 bp CTCTGCAACAGACTTCGGACAGTTTCTTCCATTCTGGAAAACTGCTaGTGCAGGCCGAGCATCTGGATCCTGTTGCGCTCTGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: LCNRLRTVSSILENC*CRPSIWILLRSDSR
Trigger: CCTGGAGTCAGAGCGCAACAGGATCCAGATGCTCGGCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCTGTTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS CCA 90 bp AAGTCGTCACAGCAAATGGACTGGAGGCTATGTGTTCAGGGTATCTaGTGTGCACTACCGCTTGGGTTGAGGGAAGAGCTGGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KSSQQMDWRLCVQGI*CALPLGLREELEGR
Trigger: CCTTCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTGCACACCAGATACCCTGAACACATAGCCTCCAGTCCATTTGCTGTGACGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTGGTCTGACTCGCTGTaGGAACAGGAGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTWSDSL*EQEAEC
Trigger: GCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACCA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGGTCTGACTCGCTGTaGGAACAGGAGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHWSDSL*EQEAEC
Trigger: GCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACCA...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCACATGGCCATGAACTaGGCTGTGTGGGTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTHMAMN*AVWVPV
Trigger: GACAGGGACCCACACAGCCAAGTTCATGGCCATGTG...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCTCCCTGGAGGGGTaGGAGGGGAGGGAGACCTCA +
Preference number: 5 (lower is better)
Translates to: SRGDLYQSTREVNSGILAISLEG*EGRETS
Trigger: TGAGGTCTCCCTCCCCTCCAACCCCTCCAGGGAGAT...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCAGAGGGGGTCTTGCTaGGGGACCCTTCCATTGAGA +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTQRGSC*GTLPLR
Trigger: TCTCAATGGAAGGGTCCCCAAGCAAGACCCCCTCTG...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp AGACACAGCCATTGGACCTCATTTCACTACTGTCACTTCTCCCCATaGGATGCCGTGACTGGATCCCTGAAGTCTGACTCCTGGGGCACT +
Preference number: 5 (lower is better)
Translates to: RHSHWTSFHYCHFSP*DAVTGSLKSDSWGT
Trigger: AGTGCCCCAGGAGTCAGACTTCAGGGATCCAGTCACGGCATCTCATGGGGAGAAGTGACAGTAGTGAAATGAGGTCCAATGGCTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp GGAGGATGGACTGTTAACCTGAGGTGTCAAGGACTCATTCACTCCTaGGAAGGAAGGCCTGTGGGGCATCACAGTGCTGTCACTCAACTG +
Preference number: 5 (lower is better)
Translates to: GGWTVNLRCQGLIHS*EGRPVGHHSAVTQL
Trigger: CAGTTGAGTGACAGCACTGTGATGCCCCACAGGCCTTCCTTCTCAGGAGTGAATGAGTCCTTGACACCTCAGGTTAACAGTCCATCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp AGCCAGCTTCTCCCGCCAGAGACTTCTGTGTTGCTCCCTGAGTTGTaGCAGCAGGTGCTCGATGCATTTGTTAGAGTCCATGTATTCCAC +
Preference number: 5 (lower is better)
Translates to: SQLLPPETSVLLPEL*QQVLDAFVRVHVFH
Trigger: GTGGAATACATGGACTCTAACAAATGCATCGAGCACCTGCTGGCACAACTCAGGGAGCAACACAGAAGTCTCTGGCGGGAGAAGCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS CCA 90 bp AGTCCTACTGGGAGGCGAGTTTTAGGTCCTTTCTCGGGAGAGTTCTaGCCACCTTGTGAGGACCCTTGGTTTCTACAGGATGAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SPTGRRVLGPFSGEF*PPCEDPWFLQDEEE
Trigger: CTCTTCCTCATCCTGTAGAAACCAAGGGTCCTCACAAGGTGGCCAGAACTCTCCCGAGAAAGGACCTAAAACTCGCCTCCCAGTAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp CGTGTTGGTGATAATCTGAGTTCGAATCTTGCCTGGCCCTTCTGTTaGGGGTGTGGAAGGCTTCTCTCCCAAGTGGATGCTGAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: RVGDNLSSNLAWPFC*GCGRLLSQVDAEAL
Trigger: CAGAGCTTCAGCATCCACTTGGGAGAGAAGCCTTCCACACCCCCAACAGAAGGGCCAGGCAAGATTCGAACTCAGATTATCACCAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp GGCCTCGTTGGATGCTTGACTTGCACAAGAGGAGAAACTGTCATACAGAGAGTCTGGTCTGACTCGCTGTaGGAACAGGAGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GLVGCLTCTRGETVIQRVWSDSL*EQEAEC
Trigger: GCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACCA...GACTCTCTGTATGACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAACGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAAGAATGTGGCTTTCTTaGATACGGGTCGGAGGTAGT +
Preference number: 5 (lower is better)
Translates to: LHPSGFPACPTLPLTVYARMWLS*IRVGGS
Trigger: ACTACCTCCGACCCGTATCAAAGAAAGCCACATTCT...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACAGGGAGACCTCATTCTaGTCTGTGGCGCAGAGACAC +
Preference number: 5 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHRETSF*SVAQRH
Trigger: GTGTCTCTGCGCCACAGACAAGAATGAGGTCTCCCT...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGGGCTTTAGGTGTGGCTaGCTGGAGGAGAAGGATCTT +
Preference number: 5 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMGFRCG*LEEKDL
Trigger: AAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCC...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCATTTCTTTTGACTTCCTaGAGTGCTCACAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: LHPSGFPACPTLPLTVYAFLLTS*SAHRAA
Trigger: AGCGGCTCTGTGAGCACTCAAGGAAGTCAAAAGAAA...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp GAGCTTTGGCTCCATTCATGCCTAGAGCAGGCTTTAGGTGTGGCTTaGTGGAGGAGAAGGATCTTTTTATGGCTCTGCTGTCTGCCCCAT +
Preference number: 5 (lower is better)
Translates to: ELWLHSCLEQALGVA*WRRRIFLWLCCLPH
Trigger: ATGGGGCAGACAGCAGAGCCATAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCCTGCTCTAGGCATGAATGGAGCCAAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp GATGATTGCTGGAGAAGCACATCAGAAGCTGGTCTGACTCGCTGTTaGAACAGGAGGCTGAGTGCTCGGTTCTGTTGCTCCAAGTCAAAC +
Preference number: 5 (lower is better)
Translates to: DDCWRSTSEAGLTRC*NRRLSARFCCSKSN
Trigger: GTTTGACTTGGAGCAACAGAACCGAGCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATGTGCTTCTCCAGCAATCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057846.15
CDS CCA 90 bp CTTTGGCTCCATTCATGCCTAGAGCAGGCTTTAGGTGTGGCTTGCTaGAGGAGAAGGATCTTTTTATGGCTCTGCTGTCTGCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: LWLHSCLEQALGVAC*RRRIFLWLCCLPHL
Trigger: GAGATGGGGCAGACAGCAGAGCCATAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCCTGCTCTAGGCATGAATGGAGCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp TCTGGGAGGGGAAAGGTTCCAATCCCGCTGTCCAGTGTTCTCATCTaGCAGTTGGATTCTATCATGTGGCTCTGGAGAGTAGTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SGRGKVPIPLSSVLI*QLDSIMWLWRVVSA
Trigger: TGCTGACACTACTCTCCAGAGCCACATGATAGAATCCAACTGCCAGATGAGAACACTGGACAGCGGGATTGGAACCTTTCCCCTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTTACTGTGCTCGCTTCTaGAGTCCTCATCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTYCARF*SPHQLP
Trigger: TGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGTA...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACCAGGGCGGACACTCCTaGAGGCTGCTGGTTTTAATT +
Preference number: 5 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHQGGHS*RLLVLI
Trigger: AATTAAAACCAGCAGCCTCAAGGAGTGTCCGCCCTG...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGCTAGCAGTTCACAGCTaGAAGGACAAGTCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LAISFSGVCLPSAPCMQELAVHS*KDKSWV
Trigger: CACCCAAGACTTGTCCTTCAAGCTGTGAACTGCTAG...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACTAACGATTCTGGCATaGTTGAGTCTAAGGCAAGTC +
Preference number: 5 (lower is better)
Translates to: LHPSGFPACPTLPLTVYALTILA*LSLRQV
Trigger: GACTTGCCTTAGACTCAACAATGCCAGAATCGTTAG...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACGGCTTTAGGTGTGGCTaGCTGGAGGAGAAGGATCTT +
Preference number: 5 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHGFRCG*LEEKDL
Trigger: AAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCC...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGGCAGATTATCAGATGTaGAGACAGAGGGGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMADYQM*RQRGSC
Trigger: GCAAGACCCCCTCTGTCTCAACATCTGATAATCTGC...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGAGGGGCCTTCCAGCATaGGGCAGATTATCAGATGTT +
Preference number: 5 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMRGLPA*GRLSDV
Trigger: AACATCTGATAATCTGCCCAATGCTGGAAGGCCCCT...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGGGCTGGGTCTATTCCTaGGCTCCAACTTCATTTGGT +
Preference number: 5 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEGWVYS*APTSFG
Trigger: ACCAAATGAAGTTGGAGCCAAGGAATAGACCCAGCC...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp GAGGGGACCAGCATGGTGGGCATAGACTCCACAAGTTTGGATTTCTaGGGTGAAGACTTGCCTCTGGAAGGGATTTTTGTCAGACCTTGC +
Preference number: 5 (lower is better)
Translates to: EGTSMVGIDSTSLDF*GEDLPLEGIFVRPC
Trigger: GCAAGGTCTGACAAAAATCCCTTCCAGAGGCAAGTCTTCACCTCAGAAATCCAAACTTGTGGAGTCTATGCCCACCATGCTGGTCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp CGGTGTCCCCAGTCAAGGACAGGTCTGAAGGGCTTCTCTCATCACTaGTCTCTATGTGTAGCTCGTTTAGGGTCTCATTGTCATCGGTAT +
Preference number: 5 (lower is better)
Translates to: RCPQSRTGLKGFSHH*SLCVARLGSHCHRY
Trigger: ATACCGATGACAATGAGACCCTAAACGAGCTACACATAGAGAGCAGTGATGAGAGAAGCCCTTCAGACCTGTCCTTGACTGGGGACACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp ACACTACTGTGCTCGCTTCTTGAGTCCTCATCAGCTGCCACCACATaGAGATCACCCAGTGCTGCTTGCTCTTTTCTCTCTTCATCAGGT +
Preference number: 5 (lower is better)
Translates to: TLLCSLLESSSAATT*RSPSAACSFLSSSG
Trigger: ACCTGATGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCATGTGGTGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS CCA 90 bp AGGAACACTTTCCGCTTCTGTAGCTTCCTCAGTCCCTCTAGAATGTaGCTTTCTTTGATACGGGTCGGAGGTAGTTCATCTGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: RNTFRFCSFLSPSRM*LSLIRVGGSSSAGL
Trigger: CAGCCCTGCAGATGAACTACCTCCGACCCGTATCAAAGAAAGCCACATTCTAGAGGGACTGAGGAAGCTACAGAAGCGGAAAGTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp TGTTTCAAGGCAGGGGTTCCTGATTTTGCATTCTGGAGGTGTTCCTaGAGAAGCACATCAGAAGCTGGTCTGACTCGCTGTTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: CFKAGVPDFAFWRCS*RSTSEAGLTRCWNR
Trigger: CCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATGTGCTTCTCCAGGAACACCTCCAGAATGCAAAATCAGGAACCCCTGCCTTGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGGCTCGAACAACTTGGTaGGCTACCTCATCAAGACAT +
Preference number: 5 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEARTTW*ATSSRH
Trigger: ATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAGC...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGAGTGCTCGGTTCTGTaGCTCCAAGTCAAACACTCT +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTECSVL*LQVKHS
Trigger: AGAGTGTTTGACTTGGAGCAACAGAACCGAGCACTC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAACAACCCTTTGTTGCTaGATGAAACTGAATGCCTTC +
Preference number: 5 (lower is better)
Translates to: LHPSGFPACPTLPLTVYATTLCC*MKLNAF
Trigger: GAAGGCATTCAGTTTCATCAAGCAACAAAGGGTTGT...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCCGAAGAGGTCCTCTaGACAACCCTTTGTTGCTTG +
Preference number: 5 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHSEEVL*TTLCCL
Trigger: CAAGCAACAAAGGGTTGTCAAGAGGACCTCTTCGGA...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTCCACCCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCAGATTTTTGTCAGACCTaGCTTTGTGTAGACACCCAT +
Preference number: 5 (lower is better)
Translates to: LHPSGFPACPTLPLTVYADFCQT*LCVDTH
Trigger: ATGGGTGTCTACACAAAGCAAGGTCTGACAAAAATC...TGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGGGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACTGCCTGGCCCTTCTGTaGGGGGTGTGGAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYCLALL*GVWKAS
Trigger: AGAAGCCTTCCACACCCCCAACAGAAGGGCCAGGCA...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACGCAGATTATCAGATGTaGAGACAGAGGGGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHADYQM*RQRGSC
Trigger: GCAAGACCCCCTCTGTCTCAACATCTGATAATCTGC...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGAGACTTTGTCTGCACTaGGCCCTTTTCCACATTCTC +
Preference number: 5 (lower is better)
Translates to: LAISFSGVCLPSAPCMQERLCLH*ALFHIL
Trigger: GAGAATGTGGAAAAGGGCCAAGTGCAGACAAAGTCT...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGGTTCTCATCTGGCAGTaGGATTCTATCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEVLIWQ*DSIMWL
Trigger: GAGCCACATGATAGAATCCAACTGCCAGATGAGAAC...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGGTTCTCATCTGGCAGTaGGATTCTATCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMVLIWQ*DSIMWL
Trigger: GAGCCACATGATAGAATCCAACTGCCAGATGAGAAC...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS TCA 90 bp ACTTGGTTGGCTACCTCATCAAGACATCGCTCATACTGTTCTCTCTaGTTCTCGTTTTCCAGTGCCAGTGCTGAATTCTCCGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: TWLATSSRHRSYCSL*FSFSSASAEFSASR
Trigger: CCTGGAGGCGGAGAATTCAGCACTGGCACTGGAAAACGAGAATCAGAGAGAACAGTATGAGCGATGTCTTGATGAGGTAGCCAACCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 90 bp CCTGGTGACAGTGACGACTCCAGCCTGGTGAGAGCTGAATTCCACTaGCTCTCCATTTTCTGCATCAAATATGACCGTGACACATTCTTC +
Preference number: 5 (lower is better)
Translates to: PGDSDDSSLVRAEFH*LSIFCIKYDRDTFF
Trigger: GAAGAATGTGTCACGGTCATATTTGATGCAGAAAATGGAGAGCCAGTGGAATTCAGCTCTCACCAGGCTGGAGTCGTCACTGTCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp TTTCTTGAGCAACTGAGGAGACTTCATGAGAACTTTGAGTCCTACTaGGAGGCGAGTTTTAGGTCCTTTCTCGGGAGAGTTCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: FLEQLRRLHENFESY*EASFRSFLGRVLAT
Trigger: GGTGGCCAGAACTCTCCCGAGAAAGGACCTAAAACTCGCCTCCCAGTAGGACTCAAAGTTCTCATGAAGTCTCCTCAGTTGCTCAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp CTATCTTCTTCATCTTCTTGTACATCTTCATTGACCTCGGCCCCCTaGAGAAGCACATCAGAAGCTGGTCTGACTCGCTGTTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: LSSSSSCTSSLTSAP*RSTSEAGLTRCWNR
Trigger: CCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATGTGCTTCTCCAGGGGGCCGAGGTCAATGAAGATGTACAAGAAGATGAAGAAGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTTACTGTGCTCGCTTCTaGAGTCCTCATCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SRGDLYQSTREVNSGILAYCARF*SPHQLP
Trigger: TGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGTA...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGCTCGAACAACTTGGTaGGCTACCTCATCAAGACAT +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTARTTW*ATSSRH
Trigger: ATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAGC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACTGGGTCCCTGTCTCTTaGCACCCAGGGCAGGTGTAT +
Preference number: 5 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYWVPVS*HPGQVY
Trigger: ATACACCTGCCCTGGGTGCAAAGAGACAGGGACCCA...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGCTCTGGAAGGGATTTTaGTCAGACCTTGCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMLWKGF*SDLALC
Trigger: ACACAAAGCAAGGTCTGACAAAAATCCCTTCCAGAG...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTCCTGGGCAGGGTGTTTaGGAATGTGTGATTCTGGCT +
Preference number: 5 (lower is better)
Translates to: SRGDLYQSTREVNSGILAPGQGV*ECVILA
Trigger: AGCCAGAATCACACATTCCAAAACACCCTGCCCAGG...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCGCACTACCGCTTGGGTaGAGGGAAGAGCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: NASFQEHGANSFYCYLSPALPLG*REELEG
Trigger: TCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTGC...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGCAGGAAACACCCTTaGATCCACTCTCTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHCRKHP*IHSLSV
Trigger: TACAGAGAGAGAGTGGATCAAAGGGTGTTTCCTGCA...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTGTTCTCATCTGGCAGTaGGATTCTATCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTVLIWQ*DSIMWL
Trigger: GAGCCACATGATAGAATCCAACTGCCAGATGAGAAC...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACGTGTTGCTCCCTGAGTaGTGCCAGCAGGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYVLLPE*CQQVLD
Trigger: ATCGAGCACCTGCTGGCACAACTCAGGGAGCAACAC...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS GCA 90 bp ACCGTGACACATTCTTCCGAAGAGGTCCTCTTGACAACCCTTTGTTaGTTGATGAAACTGAATGCCTTCGGGCTAGTCTCTAAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: TVTHSSEEVLLTTLC*LMKLNAFGLVSKWV
Trigger: CACCCACTTAGAGACTAGCCCGAAGGCATTCAGTTTCATCAAGCAACAAAGGGTTGTCAAGAGGACCTCTTCGGAAGAATGTGTCACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp GCTTTAGGTGTGGCTTGCTGGAGGAGAAGGATCTTTTTATGGCTCTaGTGTCTGCCCCATCTCTTCCATCATCTCTGGAGATGCTACATT +
Preference number: 5 (lower is better)
Translates to: ALGVACWRRRIFLWL*CLPHLFHHLWRCYI
Trigger: AATGTAGCATCTCCAGAGATGATGGAAGAGATGGGGCAGACAGCAGAGCCATAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp CGGTTGGCAGGGCGGACACTCCTTGAGGCTGCTGGTTTTAATTCCTaGCGAATAGATCCCTTCATTCGAGTTCATGCAATCTTTATAACC +
Preference number: 5 (lower is better)
Translates to: RLAGRTLLEAAGFNS*RIDPFIRVHAIFIT
Trigger: GGTTATAAAGATTGCATGAACTCGAATGAAGGGATCTATTCGCCAGGAATTAAAACCAGCAGCCTCAAGGAGTGTCCGCCCTGCCAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp TGGAGGCCACAGATGGTTTCTTCTGTATTTCTGACATCACTGGACTaGAAGAGACAAGAGGAGCAGAGGATCCTTTCAACAGCGGGGATT +
Preference number: 5 (lower is better)
Translates to: WRPQMVSSVFLTSLD*KRQEEQRILSTAGI
Trigger: AATCCCCGCTGTTGAAAGGATCCTCTGCTCCTCTTGTCTCTTCCAGTCCAGTGATGTCAGAAATACAGAAGAAACCATCTGTGGCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCTGCTCTGGAGATCCTaGGCTCTGCAACAGACTTCG +
Preference number: 5 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYLLWRS*ALQQTS
Trigger: CGAAGTCTGTTGCAGAGCCAAGGATCTCCAGAGCAG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATTACTGTGCTCGCTTCTaGAGTCCTCATCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYYCARF*SPHQLP
Trigger: TGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGTA...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CCCTCTGGCTTTCCTGCCTGCCCCACGCTTCCATTGACAGTATATGCACAAATGCTTGACAACCCTTTGTaGCTTGATGAAACTGAATGC +
Preference number: 5 (lower is better)
Translates to: PSGFPACPTLPLTVYAQMLDNPL*LDETEC
Trigger: GCATTCAGTTTCATCAAGCAACAAAGGGTTGTCAAG...CATTTGTGCATATACTGTCAATGGAAGCGTGGGGCAGGCAGGAAAGCCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTTTTTTGGAGAGACTTTaGGGGGCCCTGAAGTCGTCA +
Preference number: 5 (lower is better)
Translates to: SRGDLYQSTREVNSGILAFLERL*GALKSS
Trigger: TGACGACTTCAGGGCCCCCAAAAGTCTCTCCAAAAA...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCCAGAGGGGGTCTTGCTaGGGGACCCTTCCATTGAGA +
Preference number: 5 (lower is better)
Translates to: WCHLISAHTLILQQNTHIQRGSC*GTLPLR
Trigger: TCTCAATGGAAGGGTCCCCAAGCAAGACCCCCTCTG...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTCCCCCAAGGATTCTCTaGGTTTTTCCATATCGACTT +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTPPRIL*VFPYRL
Trigger: AAGTCGATATGGAAAAACCAAGAGAATCCTTGGGGG...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACGTCCTTCAACCTCACTaGGAGACTTCTCTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: ISFSGVCLPSAPCMQESHVLQPH*ETSLFL
Trigger: TAGGAAAAGAGAAGTCTCCAAGTGAGGTTGAAGGAC...GTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTCTCACTAGGTGCTCGATGCATTaGTTAGAGTCCATGTATTCC +
Preference number: 5 (lower is better)
Translates to: SASLESVCLVHHACRSLTRCSMH*LESMYS
Trigger: GGAATACATGGACTCTAACAAATGCATCGAGCACCT...AGTGAGACTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CAA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCCCTTGGCTTGTCCTTaGGGCAACTTCTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYPLACP*GNFSLQ
Trigger: CTGCAGAGAGAAGTTGCCCAAAGGACAAGCCAAGGG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CAA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCACTCGCTGCAGGTGCTaGACAGCGATAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: WCHLISAHTLILQQNTHITRCRC*TAIAHC
Trigger: GCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGT...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp ATGGGAGTTCTTCATGTGCATCCTCATGAGAATTTGCATCATAGATaGATGTCTGATGGAGATTCTGGCAGGGGATCCCCATGCCAGACG +
Preference number: 5 (lower is better)
Translates to: MGVLHVHPHENLHHR*MSDGDSGRGSPCQT
Trigger: CGTCTGGCATGGGGATCCCCTGCCAGAATCTCCATCAGACATTCATCTATGATGCAAATTCTCATGAGGATGCACATGAAGAACTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp GACCAGCATGGTGGGCATAGACTCCACAAGTTTGGATTTCTGAGGTaGAGACTTGCCTCTGGAAGGGATTTTTGTCAGACCTTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: DQHGGHRLHKFGFLR*RLASGRDFCQTLLC
Trigger: ACAAAGCAAGGTCTGACAAAAATCCCTTCCAGAGGCAAGTCTTCACCTCAGAAATCCAAACTTGTGGAGTCTATGCCCACCATGCTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 90 bp GAAGGCAGACTTTCTGGAGGCCACAGATGGTTTCTTCTGTATTTCTaGCATCACTGGACTGGAAGAGACAAGAGGAGCAGAGGATCCTTT +
Preference number: 5 (lower is better)
Translates to: EGRLSGGHRWFLLYF*HHWTGRDKRSRGSF
Trigger: AAAGGATCCTCTGCTCCTCTTGTCTCTTCCAGTCCAGTGATGTCAGAAATACAGAAGAAACCATCTGTGGCCTCCAGAAAGTCTGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp ATCTTGGCAGGTTCTTCCTTTTTCTGCTCTGGAGATCCTTGGCTCTaGAACAGACTTCGGACAGTTTCTTCCATTCTGGAAAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: ILAGSSFFCSGDPWL*NRLRTVSSILENCC
Trigger: GCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCTGTTGCAGAGCCAAGGATCTCCAGAGCAGAAAAAGGAAGAACCTGCCAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS CCA 90 bp TACAAGATGTCACCTCTAGCAGTTCACAGCTTGAAGGACAAGTCTTaGGTGTCTGTAAGTCTGTGTCCATGTGGGCAGTTCCTAGTGCAT +
Preference number: 5 (lower is better)
Translates to: YKMSPLAVHSLKDKS*VSVSLCPCGQFLVH
Trigger: ATGCACTAGGAACTGCCCACATGGACACAGACTTACAGACACCCAAGACTTGTCCTTCAAGCTGTGAACTGCTAGAGGTGACATCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp CTGAGCTTTGCAGACCATCGTCTGGACTCTGACCATCTGCCTTCTTaGTCCCCCTACTCAGTTCGTTTTCTATCTTTGATTGTACTTCAG +
Preference number: 5 (lower is better)
Translates to: LSFADHRLDSDHLPS*SPYSVRFLSLIVLQ
Trigger: CTGAAGTACAATCAAAGATAGAAAACGAACTGAGTAGGGGGACCAAGAAGGCAGATGGTCAGAGTCCAGACGATGGTCTGCAAAGCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGCACATGGCCATGAACTaGGCTGTGTGGGTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMHMAMN*AVWVPV
Trigger: GACAGGGACCCACACAGCCAAGTTCATGGCCATGTG...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTGACTTCATGAGAACTTaGAGTCCTACTGGGAGGCGA +
Preference number: 5 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSDFMRT*SPTGRR
Trigger: TCGCCTCCCAGTAGGACTCAAAGTTCTCATGAAGTC...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCTGCCTGGCCCTTCTGTaGGGGGTGTGGAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLCLALL*GVWKAS
Trigger: AGAAGCCTTCCACACCCCCAACAGAAGGGCCAGGCA...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCCACAGAGGCAGACTTaGTCTGCACTTGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYPQRQT*SALGPF
Trigger: AAAAGGGCCAAGTGCAGACAAAGTCTGCCTCTGTGG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTGGCTATCAGCTTCTCTGGAGTCTGTTTGCCTAGTGCACCATGCATGCAGGAGTGGCTCCAACTTCATTaGGTTATAAATGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LAISFSGVCLPSAPCMQEWLQLH*VINVLG
Trigger: TCCCAAGACATTTATAACCAAATGAAGTTGGAGCCA...CTCCTGCATGCATGGTGCACTAGGCAAACAGACTCCAGAGAAGCTGATAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATGGCTGGGTCTATTCCTaGGCTCCAACTTCATTTGGT +
Preference number: 5 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYGWVYS*APTSFG
Trigger: ACCAAATGAAGTTGGAGCCAAGGAATAGACCCAGCC...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTTTTCTTTTGACTTCCTaGAGTGCTCACAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: SRGDLYQSTREVNSGILAFLLTS*SAHRAA
Trigger: AGCGGCTCTGTGAGCACTCAAGGAAGTCAAAAGAAA...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCTGAAAGGGGCTCACTaGCCACTGCATCCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: NASFQEHGANSFYCYLSPLKGAH*PLHPQH
Trigger: ATGCTGAGGATGCAGTGGCAAGTGAGCCCCTTTCAG...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCACTCGCTGCAGGTGCTaGACAGCGATAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: LLELNASFQEHGANSFYCTRCRC*TAIAHC
Trigger: GCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGT...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 90 bp GCTTCTGGGCTCACGACACTAGTCCCAGTTGAAGAAGCATCTGGATaGCTTCCAGAAGTTTCTAGCTTAGATATCCCACTTGTTTCCAAA +
Preference number: 5 (lower is better)
Translates to: ASGLTTLVPVEEASG*LPEVSSLDIPLVSK
Trigger: TTTGGAAACAAGTGGGATATCTAAGCTAGAAACTTCTGGAAGGCATCCAGATGCTTCTTCAACTGGGACTAGTGTCGTGAGCCCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp ATCCCGCTGTCCAGTGTTCTCATCTGGCAGTTGGATTCTATCATGTaGCTCTGGAGAGTAGTGTCAGCAACTCTATCTTCTTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: IPLSSVLIWQLDSIM*LWRVVSATLSSSSS
Trigger: AGAAGATGAAGAAGATAGAGTTGCTGACACTACTCTCCAGAGCCACATGATAGAATCCAACTGCCAGATGAGAACACTGGACAGCGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCCTGCTCTGGAGATCCTaGGCTCTGCAACAGACTTCG +
Preference number: 5 (lower is better)
Translates to: LLELNASFQEHGANSFYCLLWRS*ALQQTS
Trigger: CGAAGTCTGTTGCAGAGCCAAGGATCTCCAGAGCAG...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATATCACCCAGTGCTGCTaGCTCTTTTCTCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYITQCC*LFSLFI
Trigger: GATGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGAT...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATGCTCGAACAACTTGGTaGGCTACCTCATCAAGACAT +
Preference number: 5 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYARTTW*ATSSRH
Trigger: ATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAGC...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCAGGGAGACCTCATTCTaGTCTGTGGCGCAGAGACAC +
Preference number: 5 (lower is better)
Translates to: LLELNASFQEHGANSFYCRETSF*SVAQRH
Trigger: GTGTCTCTGCGCCACAGACAAGAATGAGGTCTCCCT...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACCTAGCAGTTCACAGCTaGAAGGACAAGTCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYLAVHS*KDKSWV
Trigger: CACCCAAGACTTGTCCTTCAAGCTGTGAACTGCTAG...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCTACGACTTCATGAGAACTTaGAGTCCTACTGGGAGGCGA +
Preference number: 5 (lower is better)
Translates to: IVSRAWRQLFLLLSFSPYDFMRT*SPTGRR
Trigger: TCGCCTCCCAGTAGGACTCAAAGTTCTCATGAAGTC...GTAGGGGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTACGATTCTGGCATTGTaGAGTCTAAGGCAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSTILAL*SLRQVL
Trigger: GAGGACTTGCCTTAGACTCAACAATGCCAGAATCGT...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAGACTTTGTCTGCACTaGGCCCTTTTCCACATTCTC +
Preference number: 5 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSRLCLH*ALFHIL
Trigger: GAGAATGTGGAAAAGGGCCAAGTGCAGACAAAGTCT...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCCTGAAAGGGGCTCACTaGCCACTGCATCCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: LLELNASFQEHGANSFYCLKGAH*PLHPQH
Trigger: ATGCTGAGGATGCAGTGGCAAGTGAGCCCCTTTCAG...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATCGTTGGATGCTTGACTaGCACAAGAGGAGAAACTGT +
Preference number: 5 (lower is better)
Translates to: HSKSRRSLSVHERSKLWYRWMLD*HKRRNC
Trigger: ACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAACG...ATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCGTGTTGCTCCCTGAGTaGTGCCAGCAGGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLVLLPE*CQQVLD
Trigger: ATCGAGCACCTGCTGGCACAACTCAGGGAGCAACAC...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CAA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGCCCTTGGCTTGTCCTTaGGGCAACTTCTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMPLACP*GNFSLQ
Trigger: CTGCAGAGAGAAGTTGCCCAAAGGACAAGCCAAGGG...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTGCATGGCCCCTTGGCTaGTCCTTTGGGCAACTTCTC +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLAWPLG*SFGQLL
Trigger: GAGAAGTTGCCCAAAGGACAAGCCAAGGGGCCATGC...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS CCA 90 bp GAAGGCATCTTTTGTTGGGCACACAGCAGGGCTGGGTCTATTCCTTaGCTCCAACTTCATTTGGTTATAAATGTCTTGGGATACTTTCAG +
Preference number: 5 (lower is better)
Translates to: EGIFCWAHSRAGSIP*LQLHLVINVLGYFQ
Trigger: CTGAAAGTATCCCAAGACATTTATAACCAAATGAAGTTGGAGCCAAGGAATAGACCCAGCCCTGCTGTGTGCCCAACAAAAGATGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCGAGTGCTCGGTTCTGTaGCTCCAAGTCAAACACTCT +
Preference number: 5 (lower is better)
Translates to: NASFQEHGANSFYCYLSPECSVL*LQVKHS
Trigger: AGAGTGTTTGACTTGGAGCAACAGAACCGAGCACTC...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCGGCTGGCGAAGCCACTaGGGAGCGAAGAATCAATAC +
Preference number: 5 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLGWRSH*GAKNQY
Trigger: GTATTGATTCTTCGCTCCCAAGTGGCTTCGCCAGCC...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCTCCGAAGAGGTCCTCTaGACAACCCTTTGTTGCTTG +
Preference number: 5 (lower is better)
Translates to: WCHLISAHTLILQQNTHISEEVL*TTLCCL
Trigger: CAAGCAACAAAGGGTTGTCAAGAGGACCTCTTCGGA...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATCCTCTCAAAACACAGTAAGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTTTGTCAGACCTTGCTTaGTGTAGACACCCATGTTTC +
Preference number: 5 (lower is better)
Translates to: ILSKHSKSRRSLSVHERSLSDLA*CRHPCF
Trigger: GAAACATGGGTGTCTACACAAAGCAAGGTCTGACAA...ACTTCTCTCGTGGACTGATAGAGATCGCCTCGACTTACTGTGTTTTGAGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGCCACTTGTTTCCAAATaGCTTGGGCGCTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMPLVSK*LGRCIL
Trigger: GAGGATGCAGCGCCCAAGCAATTTGGAAACAAGTGG...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCCCACAGAGGCAGACTTaGTCTGCACTTGGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: LLELNASFQEHGANSFYCPQRQT*SALGPF
Trigger: AAAAGGGCCAAGTGCAGACAAAGTCTGCCTCTGTGG...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAAATGAGCTTCCTGTCTaGCCACGTGTAGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: HLISAHTLILQQNTHIITNELPV*PRVGGA
Trigger: GGCTCCTCCTACACGTGGCAAGACAGGAAGCTCATT...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 90 bp CTGTCCAGTGTTCTCATCTGGCAGTTGGATTCTATCATGTGGCTCTaGAGAGTAGTGTCAGCAACTCTATCTTCTTCATCTTCTTGTACA +
Preference number: 5 (lower is better)
Translates to: LSSVLIWQLDSIMWL*RVVSATLSSSSSCT
Trigger: TGTACAAGAAGATGAAGAAGATAGAGTTGCTGACACTACTCTCCAGAGCCACATGATAGAATCCAACTGCCAGATGAGAACACTGGACAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCGCTCGAACAACTTGGTaGGCTACCTCATCAAGACAT +
Preference number: 5 (lower is better)
Translates to: WCHLISAHTLILQQNTHIARTTW*ATSSRH
Trigger: ATGTCTTGATGAGGTAGCCAACCAAGTTGTTCGAGC...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTTGGTCTGACTCGCTGTaGGAACAGGAGGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAWSDSL*EQEAEC
Trigger: GCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACCA...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTCAGGGCGGACACTCCTaGAGGCTGCTGGTTTTAATT +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLQGGHS*RLLVLI
Trigger: AATTAAAACCAGCAGCCTCAAGGAGTGTCCGCCCTG...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGACTCTGGAAGGGATTTTaGTCAGACCTTGCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: YQSTREVNSGILAISFSGLWKGF*SDLALC
Trigger: ACACAAAGCAAGGTCTGACAAAAATCCCTTCCAGAG...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTGGGCAGGGTGTTTaGGAATGTGTGATTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LMHRFKSMAPTLFIAIFLPGQGV*ECVILA
Trigger: AGCCAGAATCACACATTCCAAAACACCCTGCCCAGG...GAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGAGTCCTTCAACCTCACTaGGAGACTTCTCTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: YQSTREVNSGILAISFSGVLQPH*ETSLFL
Trigger: TAGGAAAAGAGAAGTCTCCAAGTGAGGTTGAAGGAC...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCGCCTTTCTCTTCCTTTaGTCCTTCAACCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: WCHLISAHTLILQQNTHIAFLFL*SFNLTW
Trigger: CCAAGTGAGGTTGAAGGACAAAAGGAAGAGAAAGGC...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTATCAGCTTCTCTGGAAGGTGCTCGATGCATTaGTTAGAGTCCATGTATTCC +
Preference number: 5 (lower is better)
Translates to: YQSTREVNSGILAISFSGRCSMH*LESMYS
Trigger: GGAATACATGGACTCTAACAAATGCATCGAGCACCT...TCCAGAGAAGCTGATAGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
CDS TCA 90 bp CAACTTCATTTGGTTATAAATGTCTTGGGATACTTTCAGACTCTCTaGGCTTTGCAGACCATCGTCTGGACTCTGACCATCTGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: QLHLVINVLGYFQTL*ALQTIVWTLTICLL
Trigger: AAGAAGGCAGATGGTCAGAGTCCAGACGATGGTCTGCAAAGCTCAGAGAGTCTGAAAGTATCCCAAGACATTTATAACCAAATGAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTCTGCTCTGGAGATCCTaGGCTCTGCAACAGACTTCG +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSALLWRS*ALQQTS
Trigger: CGAAGTCTGTTGCAGAGCCAAGGATCTCCAGAGCAG...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTGAGTGCTCGGTTCTGTaGCTCCAAGTCAAACACTCT +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLECSVL*LQVKHS
Trigger: AGAGTGTTTGACTTGGAGCAACAGAACCGAGCACTC...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGGCTGGCGAAGCCACTaGGGAGCGAAGAATCAATAC +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAGWRSH*GAKNQY
Trigger: GTATTGATTCTTCGCTCCCAAGTGGCTTCGCCAGCC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp TGGTGCCATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCTGGCGAGCTTTGGTCTaGGGGAATTCTGAGTTATTA +
Preference number: 5 (lower is better)
Translates to: WCHLISAHTLILQQNTHIWRALV*GNSELL
Trigger: TAATAACTCAGAATTCCCCAAGACCAAAGCTCGCCA...GATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATGGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAGCAGAGACACAGCCATaGGACCTCATTTCACTACTG +
Preference number: 5 (lower is better)
Translates to: HLISAHTLILQQNTHIITAETQP*DLISLL
Trigger: CAGTAGTGAAATGAGGTCCAATGGCTGTGTCTCTGC...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTTTTTGGAGAGACTTTaGGGGGCCCTGAAGTCGTCA +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLFLERL*GALKSS
Trigger: TGACGACTTCAGGGCCCCCAAAAGTCTCTCCAAAAA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACAAGGGGCCTTCCAGCATaGGGCAGATTATCAGATGTT +
Preference number: 5 (lower is better)
Translates to: HLISAHTLILQQNTHIITRGLPA*GRLSDV
Trigger: AACATCTGATAATCTGCCCAATGCTGGAAGGCCCCT...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCCCCCCAAGGATTCTCTaGGTTTTTCCATATCGACTT +
Preference number: 5 (lower is better)
Translates to: NASFQEHGANSFYCYLSPPPRIL*VFPYRL
Trigger: AAGTCGATATGGAAAAACCAAGAGAATCCTTGGGGG...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AGTCGAGGCGATCTCTATCAGTCCACGAGAGAAGTAAACTCTGGTATACTGGCTTCTCAGGATCTTCTTTaGTTTCTTCAACTTGTTTCG +
Preference number: 5 (lower is better)
Translates to: SRGDLYQSTREVNSGILASQDLL*FLQLVS
Trigger: CGAAACAAGTTGAAGAAACAAAAGAAGATCCTGAGA...AGCCAGTATACCAGAGTTTACTTCTCTCGTGGACTGATAGAGATCGCCTCGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCGCCTTTCTCTTCCTTTaGTCCTTCAACCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: LLELNASFQEHGANSFYCAFLFL*SFNLTW
Trigger: CCAAGTGAGGTTGAAGGACAAAAGGAAGAGAAAGGC...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGCGTTGGATGCTTGACTaGCACAAGAGGAGAAACTGT +
Preference number: 5 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMRWMLD*HKRRNC
Trigger: ACAGTTTCTCCTCTTGTGCAAGTCAAGCATCCAACG...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTATCACCCAGTGCTGCTaGCTCTTTTCTCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLITQCC*LFSLFI
Trigger: GATGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGAT...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTTACTGTGCTCGCTTCTaGAGTCCTCATCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAYCARF*SPHQLP
Trigger: TGGCAGCTGATGAGGACTCAAGAAGCGAGCACAGTA...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTAGAATGTGGCTTTCTTaGATACGGGTCGGAGGTAGT +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLRMWLS*IRVGGS
Trigger: ACTACCTCCGACCCGTATCAAAGAAAGCCACATTCT...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGTGGCGAGCTTTGGTCTaGGGGAATTCTGAGTTATTA +
Preference number: 5 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMWRALV*GNSELL
Trigger: TAATAACTCAGAATTCCCCAAGACCAAAGCTCGCCA...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCGATTTTTGTCAGACCTaGCTTTGTGTAGACACCCAT +
Preference number: 5 (lower is better)
Translates to: NASFQEHGANSFYCYLSPDFCQT*LCVDTH
Trigger: ATGGGTGTCTACACAAAGCAAGGTCTGACAAAAATC...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTACGATTCTGGCATTGTaGAGTCTAAGGCAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLTILAL*SLRQVL
Trigger: GAGGACTTGCCTTAGACTCAACAATGCCAGAATCGT...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTCCACTTGTTTCCAAATaGCTTGGGCGCTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAPLVSK*LGRCIL
Trigger: GAGGATGCAGCGCCCAAGCAATTTGGAAACAAGTGG...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTTGTCAGACCTTGCTTaGTGTAGACACCCATGTTTC +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLLSDLA*CRHPCF
Trigger: GAAACATGGGTGTCTACACAAAGCAAGGTCTGACAA...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGCAGAGACACAGCCATaGGACCTCATTTCACTACTG +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAAETQP*DLISLL
Trigger: CAGTAGTGAAATGAGGTCCAATGGCTGTGTCTCTGC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTCTAACGATTCTGGCATaGTTGAGTCTAAGGCAAGTC +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLLTILA*LSLRQV
Trigger: GACTTGCCTTAGACTCAACAATGCCAGAATCGTTAG...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp GAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTACAACCCTTTGTTGCTaGATGAAACTGAATGCCTTC +
Preference number: 5 (lower is better)
Translates to: ELNASFQEHGANSFYCYLTTLCC*MKLNAF
Trigger: GAAGGCATTCAGTTTCATCAAGCAACAAAGGGTTGT...AAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CATCTAATCAGTGCTCACACTCTAATTCTTCAACAGAACACCCATATCATCACACTTGACAACCCTTTGTaGCTTGATGAAACTGAATGC +
Preference number: 5 (lower is better)
Translates to: HLISAHTLILQQNTHIITLDNPL*LDETEC
Trigger: GCATTCAGTTTCATCAAGCAACAAAGGGTTGTCAAG...TGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTGTGAGCACTGATTAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTTGGTTATAAATGTCTaGGGATACTTTCAGACTCTC +
Preference number: 5 (lower is better)
Translates to: NASFQEHGANSFYCYLSPLVINV*GYFQTL
Trigger: GAGAGTCTGAAAGTATCCCAAGACATTTATAACCAA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CTTCTAGAACTTAATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTGGCTCCAACTTCATTaGGTTATAAATGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: LLELNASFQEHGANSFYCWLQLH*VINVLG
Trigger: TCCCAAGACATTTATAACCAAATGAAGTTGGAGCCA...GCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATTAAGTTCTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp AATGCATCGTTTCAAGAGCATGGCGCCAACTCTTTTTATTGCTATCTTTCTCCCTTTGATGTTTTTCTTTaGACTTCCTTGAGTGCTCAC +
Preference number: 5 (lower is better)
Translates to: NASFQEHGANSFYCYLSPFDVFL*TSLSAH
Trigger: GTGAGCACTCAAGGAAGTCAAAAGAAAAACATCAAA...GGGAGAAAGATAGCAATAAAAAGAGTTGGCGCCATGCTCTTGAAACGATGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTGTTCTCATCTGGCAGTaGGATTCTATCATGTGGCTC +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAVLIWQ*DSIMWL
Trigger: GAGCCACATGATAGAATCCAACTGCCAGATGAGAAC...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS GCA 90 bp AATAGATCCCTTCATTCGAGTTCATGCAATCTTTATAACCCCATTTaGTTATCACCAATGATGGTGATTCAAGGAACACTTTCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: NRSLHSSSCNLYNPI*LSPMMVIQGTLSAS
Trigger: AGAAGCGGAAAGTGTTCCTTGAATCACCATCATTGGTGATAAGCAAATGGGGTTATAAAGATTGCATGAACTCGAATGAAGGGATCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGTTGGTTATAAATGTCTaGGGATACTTTCAGACTCTC +
Preference number: 5 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMLVINV*GYFQTL
Trigger: GAGAGTCTGAAAGTATCCCAAGACATTTATAACCAA...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp CACTCTAATTCTTCAACAGAACACCCATATCATCACATCTTCCTCGAGACAATGTCTCAGGATCTTCTTTaGTTTCTTCAACTTGTTTCG +
Preference number: 5 (lower is better)
Translates to: HSNSSTEHPYHHIFLETMSQDLL*FLQLVS
Trigger: CGAAACAAGTTGAAGAAACAAAAGAAGATCCTGAGA...CATTGTCTCGAGGAAGATGTGATGATATGGGTGTTCTGTTGAAGAATTAGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTTTTTCCACTTTACTCTaGGAAGCTTCCATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAFSTLL*EASILL
Trigger: CAGGAGAATGGAAGCTTCCAAGAGTAAAGTGGAAAA...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS-3UTR CAA 90 bp ATATGCACAAATGAGTTGAGGACCAAGATGATTATGTTCACAAAATCTTCAGCTTTTGATGTTTTTCTTTaGACTTCCTTGAGTGCTCAC +
Preference number: 5 (lower is better)
Translates to: ICTNELRTKMIMFTKSSAFDVFL*TSLSAH
Trigger: GTGAGCACTCAAGGAAGTCAAAAGAAAAACATCAAA...AGCTGAAGATTTTGTGAACATAATCATCTTGGTCCTCAACTCATTTGTGCATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp TGGGCTCTGGCAGAGGATGCCATGGAAGCGGCTGGCTaGAGAGGCAGGAGGGCATCAGTGTCCTCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: WALAEDAMEAAG*RGRRASVSSGE
Trigger: CTCTCCAGAGGACACTGATGCCCTCCTGCCTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCAGAGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CAA 90 bp GGAGCTCTGGCTGTCTGTGGAGGAAGGCACTTCGCGGTCAAGGGTTaGGGCTCTGGCAGAGGATGCCATGGAAGCGGCTGGCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: GALAVCGGRHFAVKG*GSGRGCHGSGWLER
Trigger: CCTCTCCAGCCAGCCGCTTCCATGGCATCCTCTGCCAGAGCCCAAACCCTTGACCGCGAAGTGCCTTCCTCCACAGACAGCCAGAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS GCA 72 bp AAAACTGCTGCTGCAGGCCGAGCATCTGGATCCTGTTaGGCTCTGACTCCAGGGTCACCTCCCGCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: KTAAAGRASGSC*ALTPGSPPAAA
Trigger: AGCGGCTGCGGGAGGTGACCCTGGAGTCAGAGCGCAACAGGATCCAGATGCTCGGCCTGCAGCAGCAGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS CAA 72 bp GCTGTCTGTGGAGGAAGGCACTTCGCGGTCAAGGGTTaGGGCTCTGGCAGAGGATGCCATGGAAGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: AVCGGRHFAVKG*GSGRGCHGSGW
Trigger: CCAGCCGCTTCCATGGCATCCTCTGCCAGAGCCCAAACCCTTGACCGCGAAGTGCCTTCCTCCACAGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS GCA 72 bp TCACAGAGCCGCTGGCGAAACAGGAGCCCTGGGAGGTaGCCTCTAACACGCTCCTGCAGGAAACACCCTTTG +
Preference number: 6 (lower is better)
Translates to: SQSRWRNRSPGR*PLTRSCRKHPL
Trigger: CAAAGGGTGTTTCCTGCAGGAGCGTGTTAGAGGGCACCTCCCAGGGCTCCTGTTTCGCCAGCGGCTCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp CTTGCCACGTGTAGGAGGAGCCACTGGAGTACTCGCTGCAGGTGCTaGACAGCGATAGCTCACTGCCACTGCTGCAGCTGTTGCGAGGAC +
Preference number: 6 (lower is better)
Translates to: LATCRRSHWSTRCRC*TAIAHCHCCSCCED
Trigger: GTCCTCGCAACAGCTGCAGCAGTGGCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACACGTGGCAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp ACGTGTAGGAGGAGCCACTGGAGTACTCGCTGCAGGTaGTTGACAGCGATAGCTCACTGCCACTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: TCRRSHWSTRCR*LTAIAHCHCCS
Trigger: GCTGCAGCAGTGGCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACACGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp CTTGCCACGTGTAGGAGGAGCCACTGGAGTACTCGCTaGAGGTGCTTGACAGCGATAGCTCACTGCCACTGC +
Preference number: 6 (lower is better)
Translates to: LATCRRSHWSTR*RCLTAIAHCHC
Trigger: GCAGTGGCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACACGTGGCAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp ATCAGCTTCTCGTGCATGGCCCCTTGGCTTGTCCTTTaGGCAACTTCTCTCTGCAGCCTGGCCACAGCCAGC +
Preference number: 6 (lower is better)
Translates to: ISFSCMAPWLVL*ATSLCSLATAS
Trigger: GCTGGCTGTGGCCAGGCTGCAGAGAGAAGTTGCCCAAAGGACAAGCCAAGGGGCCATGCACGAGAAGCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS CAA 72 bp TCCCTGGAGGGGTTGGAGGGGAGGGAGACCTCATTCTaGTCTGTGGCGCAGAGACACAGCCATTGGACCTCA +
Preference number: 6 (lower is better)
Translates to: SLEGLEGRETSF*SVAQRHSHWTS
Trigger: TGAGGTCCAATGGCTGTGTCTCTGCGCCACAGACAAGAATGAGGTCTCCCTCCCCTCCAACCCCTCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp CTTGGGCGCTGCATCCTCCCTGGAACGTGCAGGAACTaGGGGCAGTCTGAAAGAGGAGATGGATGCCTATGG +
Preference number: 6 (lower is better)
Translates to: LGRCILPGTCRN*GQSERGDGCLW
Trigger: CCATAGGCATCCATCTCCTCTTTCAGACTGCCCTCAGTTCCTGCACGTTCCAGGGAGGATGCAGCGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp TCCATTCTGGAAAACTGCTGCTGCAGGCCGAGCATCTaGATCCTGTTGCGCTCTGACTCCAGGGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: SILENCCCRPSI*ILLRSDSRVTS
Trigger: GGAGGTGACCCTGGAGTCAGAGCGCAACAGGATCCAGATGCTCGGCCTGCAGCAGCAGTTTTCCAGAATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS CCA 72 bp GGCAGGAGGGCATCAGTGTCCTCTGGAGAGTCCTGCTaGCATATGTATCGTCCCACTGAGCGGTTTCCTGAG +
Preference number: 6 (lower is better)
Translates to: GRRASVSSGESC*HMYRPTERFPE
Trigger: CTCAGGAAACCGCTCAGTGGGACGATACATATGCCAGCAGGACTCTCCAGAGGACACTGATGCCCTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 72 bp ATTGACCTCGGCCCCCTGGAGAAGCACATCAGAAGCTaGTCTGACTCGCTGTTGGAACAGGAGGCTGAGTGC +
Preference number: 6 (lower is better)
Translates to: IDLGPLEKHIRS*SDSLLEQEAEC
Trigger: GCACTCAGCCTCCTGTTCCAACAGCGAGTCAGACCAGCTTCTGATGTGCTTCTCCAGGGGGCCGAGGTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS CAA 72 bp TGTAGGAGGAGCCACTGGAGTACTCGCTGCAGGTGCTaGACAGCGATAGCTCACTGCCACTGCTGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: CRRSHWSTRCRC*TAIAHCHCCSC
Trigger: ACAGCTGCAGCAGTGGCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACTCCAGTGGCTCCTCCTACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp TGGAGGCTATGTGTTCAGGGTATCTGGTGTGCACTACCGCTTGGGTaGAGGGAAGAGCTGGAGGGAAGGCAGACTTTCTGGAGGCCACAG +
Preference number: 6 (lower is better)
Translates to: WRLCVQGIWCALPLG*REELEGRQTFWRPQ
Trigger: CTGTGGCCTCCAGAAAGTCTGCCTTCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTGCACACCAGATACCCTGAACACATAGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp CTCTGGCCATCATGCTGGGGTCAGATATGGAATGGATaGTCATGGACTCCGGGGAGCTCTGGCTGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: LWPSCWGQIWNG*SWTPGSSGCLW
Trigger: CCACAGACAGCCAGAGCTCCCCGGAGTCCATGATCATCCATTCCATATCTGACCCCAGCATGATGGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS GCA 72 bp AGAGGCAGGAGGGCATCAGTGTCCTCTGGAGAGTCCTaGTGGCATATGTATCGTCCCACTGAGCGGTTTCCT +
Preference number: 6 (lower is better)
Translates to: RGRRASVSSGES*WHMYRPTERFP
Trigger: AGGAAACCGCTCAGTGGGACGATACATATGCCAGCAGGACTCTCCAGAGGACACTGATGCCCTCCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS GCA 72 bp AGTACTCGCTGCAGGTGCTTGACAGCGATAGCTCACTaGCACTGCTGCAGCTGTTGCGAGGACAGAGGTGAT +
Preference number: 6 (lower is better)
Translates to: STRCRCLTAIAH*HCCSCCEDRGD
Trigger: ATCACCTCTGTCCTCGCAACAGCTGCAGCAGTGGCAGTGAGCTATCGCTGTCAAGCACCTGCAGCGAGTACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp CAGGTTCAGAGGCACATGGCCATGAACTTGGCTGTGTaGGTCCCTGTCTCTTTGCACCCAGGGCAGGTGTAT +
Preference number: 6 (lower is better)
Translates to: QVQRHMAMNLAV*VPVSLHPGQVY
Trigger: ATACACCTGCCCTGGGTGCAAAGAGACAGGGACCCACACAGCCAAGTTCATGGCCATGTGCCTCTGAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp GATATGGAATGGATGATCATGGACTCCGGGGAGCTCTaGCTGTCTGTGGAGGAAGGCACTTCGCGGTCAAGG +
Preference number: 6 (lower is better)
Translates to: DMEWMIMDSGEL*LSVEEGTSRSR
Trigger: CCTTGACCGCGAAGTGCCTTCCTCCACAGACAGCCAGAGCTCCCCGGAGTCCATGATCATCCATTCCATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CAA 90 bp ACACTGATCTCCCTGGAGGGGTTGGAGGGGAGGGAGACCTCATTCTaGTCTGTGGCGCAGAGACACAGCCATTGGACCTCATTTCACTAC +
Preference number: 6 (lower is better)
Translates to: TLISLEGLEGRETSF*SVAQRHSHWTSFHY
Trigger: GTAGTGAAATGAGGTCCAATGGCTGTGTCTCTGCGCCACAGACAAGAATGAGGTCTCCCTCCCCTCCAACCCCTCCAGGGAGATCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp GATTTCAACCCTGGACTTACAGCGTCTCCAGGGCCCTaGGTTTCAGGTTTGGCAGGTGATGGTAGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: DFNPGLTASPGP*VSGLAGDGSGG
Trigger: CCCACCACTACCATCACCTGCCAAACCTGAAACTCAGGGCCCTGGAGACGCTGTAAGTCCAGGGTTGAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp GTGTTCAGGGTATCTGGTGTGCACTACCGCTTGGGTTaGGGGAAGAGCTGGAGGGAAGGCAGACTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: VFRVSGVHYRLG*GKSWREGRLSG
Trigger: TCCAGAAAGTCTGCCTTCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTGCACACCAGATACCCTGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp TTGGGGGTGTGGAAGGCTTCTCTCCCAAGTGGATGCTaGAGCTCTGACTCCGAGCTTTGGCTCCATTCATGC +
Preference number: 6 (lower is better)
Translates to: LGVWKASLPSGC*SSDSELWLHSC
Trigger: GCATGAATGGAGCCAAAGCTCGGAGTCAGAGCTTCAGCATCCACTTGGGAGAGAAGCCTTCCACACCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp CATCCTCCCTGGAACGTGCAGGAACTGAGGGCAGTCTaGAAGAGGAGATGGATGCCTATGGTGGTCACTGCT +
Preference number: 6 (lower is better)
Translates to: HPPWNVQELRAV*KRRWMPMVVTA
Trigger: AGCAGTGACCACCATAGGCATCCATCTCCTCTTTCAGACTGCCCTCAGTTCCTGCACGTTCCAGGGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp AGCAGAGGATCCTTTCAACAGCGGGGATTTCAACCCTaGACTTACAGCGTCTCCAGGGCCCTGAGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: SRGSFQQRGFQP*TYSVSRALSFR
Trigger: CCTGAAACTCAGGGCCCTGGAGACGCTGTAAGTCCAGGGTTGAAATCCCCGCTGTTGAAAGGATCCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp GGGGAGGGAGACCTCATTCTTGTCTGTGGCGCAGAGACACAGCCATaGGACCTCATTTCACTACTGTCACTTCTCCCCATGAGATGCCGT +
Preference number: 6 (lower is better)
Translates to: GEGDLILVCGAETQP*DLISLLSLLPMRCR
Trigger: ACGGCATCTCATGGGGAGAAGTGACAGTAGTGAAATGAGGTCCAATGGCTGTGTCTCTGCGCCACAGACAAGAATGAGGTCTCCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp AGCCCTGGGAGGTGCCCTCTAACACGCTCCTGCAGGAAACACCCTTaGATCCACTCTCTCTCTGTACCGAGGCTCTCTTATCAACTCTGT +
Preference number: 6 (lower is better)
Translates to: SPGRCPLTRSCRKHP*IHSLSVPRLSYQLC
Trigger: ACAGAGTTGATAAGAGAGCCTCGGTACAGAGAGAGAGTGGATCAAAGGGTGTTTCCTGCAGGAGCGTGTTAGAGGGCACCTCCCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp GTGGAAGGCTTCTCTCCCAAGTGGATGCTGAAGCTCTaGCTCCGAGCTTTGGCTCCATTCATGCCTAGAGCA +
Preference number: 6 (lower is better)
Translates to: VEGFSPKWMLKL*LRALAPFMPRA
Trigger: TGCTCTAGGCATGAATGGAGCCAAAGCTCGGAGTCAGAGCTTCAGCATCCACTTGGGAGAGAAGCCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp CTTCGGACAGTTTCTTCCATTCTGGAAAACTGCTGCTaGAGGCCGAGCATCTGGATCCTGTTGCGCTCTGAC +
Preference number: 6 (lower is better)
Translates to: LRTVSSILENCC*RPSIWILLRSD
Trigger: GTCAGAGCGCAACAGGATCCAGATGCTCGGCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS GCA 72 bp CTCCCGCCAGAGACTTCTGTGTTGCTCCCTGAGTTGTaGCAGCAGGTGCTCGATGCATTTGTTAGAGTCCAT +
Preference number: 6 (lower is better)
Translates to: LPPETSVLLPEL*QQVLDAFVRVH
Trigger: ATGGACTCTAACAAATGCATCGAGCACCTGCTGGCACAACTCAGGGAGCAACACAGAAGTCTCTGGCGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS CCA 72 bp GCTATGTGTTCAGGGTATCTGGTGTGCACTACCGCTTaGGTTGAGGGAAGAGCTGGAGGGAAGGCAGACTTT +
Preference number: 6 (lower is better)
Translates to: AMCSGYLVCTTA*VEGRAGGKADF
Trigger: AAAGTCTGCCTTCCCTCCAGCTCTTCCCTCAACCCAAGCGGTAGTGCACACCAGATACCCTGAACACATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp GGGAGGCGAGTTTTAGGTCCTTTCTCGGGAGAGTTCTaGCCACCTTGTGAGGACCCTTGGTTTCTACAGGAT +
Preference number: 6 (lower is better)
Translates to: GRRVLGPFSGEF*PPCEDPWFLQD
Trigger: ATCCTGTAGAAACCAAGGGTCCTCACAAGGTGGCCAGAACTCTCCCGAGAAAGGACCTAAAACTCGCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp TTTTCTTTTGACTTCCTTGAGTGCTCACAGAGCCGCTaGCGAAACAGGAGCCCTGGGAGGTGCCCTCTAACA +
Preference number: 6 (lower is better)
Translates to: FSFDFLECSQSR*RNRSPGRCPLT
Trigger: TGTTAGAGGGCACCTCCCAGGGCTCCTGTTTCGCCAGCGGCTCTGTGAGCACTCAAGGAAGTCAAAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp ATCTCTCTGGCCATCATGCTGGGGTCAGATATGGAATaGATGATCATGGACTCCGGGGAGCTCTGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: ISLAIMLGSDME*MIMDSGELWLS
Trigger: AGACAGCCAGAGCTCCCCGGAGTCCATGATCATCCATTCCATATCTGACCCCAGCATGATGGCCAGAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CCA 72 bp TCCAACTCATGTATCAGCTTCTCGTGCATGGCCCCTTaGCTTGTCCTTTGGGCAACTTCTCTCTGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: SNSCISFSCMAP*LVLWATSLCSL
Trigger: CAGGCTGCAGAGAGAAGTTGCCCAAAGGACAAGCCAAGGGGCCATGCACGAGAAGCTGATACATGAGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS CAA 90 bp TTCCGCTTCTGTAGCTTCCTCAGTCCCTCTAGAATGTGGCTTTCTTaGATACGGGTCGGAGGTAGTTCATCTGCAGGGCTGGCGAAGCCA +
Preference number: 6 (lower is better)
Translates to: FRFCSFLSPSRMWLS*IRVGGSSSAGLAKP
Trigger: TGGCTTCGCCAGCCCTGCAGATGAACTACCTCCGACCCGTATCAAAGAAAGCCACATTCTAGAGGGACTGAGGAAGCTACAGAAGCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp CGAGCTTTGGCTCCATTCATGCCTAGAGCAGGCTTTAGGTGTGGCTaGCTGGAGGAGAAGGATCTTTTTATGGCTCTGCTGTCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: RALAPFMPRAGFRCG*LEEKDLFMALLSAP
Trigger: TGGGGCAGACAGCAGAGCCATAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCCTGCTCTAGGCATGAATGGAGCCAAAGCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp CACAGCCAGCTTCTCCCGCCAGAGACTTCTGTGTTGCTCCCTGAGTaGTGCCAGCAGGTGCTCGATGCATTTGTTAGAGTCCATGTATTC +
Preference number: 6 (lower is better)
Translates to: HSQLLPPETSVLLPE*CQQVLDAFVRVHVF
Trigger: GAATACATGGACTCTAACAAATGCATCGAGCACCTGCTGGCACAACTCAGGGAGCAACACAGAAGTCTCTGGCGGGAGAAGCTGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS TCA 72 bp CTGTTCTCTCTGATTCTCGTTTTCCAGTGCCAGTGCTaGATTCTCCGCCTCCAGGGCCTTCAGTCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LFSLILVFQCQC*ILRLQGLQSLQ
Trigger: CTGAAGAGACTGAAGGCCCTGGAGGCGGAGAATTCAGCACTGGCACTGGAAAACGAGAATCAGAGAGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS GCA 72 bp AGACTTCGGACAGTTTCTTCCATTCTGGAAAACTGCTaGTGCAGGCCGAGCATCTGGATCCTGTTGCGCTCT +
Preference number: 6 (lower is better)
Translates to: RLRTVSSILENC*CRPSIWILLRS
Trigger: AGAGCGCAACAGGATCCAGATGCTCGGCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS GCA 72 bp AACAGACTTCGGACAGTTTCTTCCATTCTGGAAAACTaGTGCTGCAGGCCGAGCATCTGGATCCTGTTGCGC +
Preference number: 6 (lower is better)
Translates to: NRLRTVSSILEN*CCRPSIWILLR
Trigger: GCGCAACAGGATCCAGATGCTCGGCCTGCAGCAGCAGTTTTCCAGAATGGAAGAAACTGTCCGAAGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS GCA 72 bp TCAGCTGCCACCACATGGAGATCACCCAGTGCTGCTTaGTCTTTTCTCTCTTCATCAGGTAGTCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SAATTWRSPSAA*SFLSSSGSPSW
Trigger: CCAGGAAGGACTACCTGATGAAGAGAGAAAAGAGCAAGCAGCACTGGGTGATCTCCATGTGGTGGCAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS CCA 72 bp CTAGACTGTCGGGACCTCTCACACCTAGTAAGGCTGTaGTTCTCTCATCTCTTGAGGTCTCCAGACTTGCAG +
Preference number: 6 (lower is better)
Translates to: LDCRDLSHLVRL*FSHLLRSPDLQ
Trigger: CTGCAAGTCTGGAGACCTCAAGAGATGAGAGAACCACAGCCTTACTAGGTGTGAGAGGTCCCGACAGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp GATAATCTGAGTTCGAATCTTGCCTGGCCCTTCTGTTaGGGGTGTGGAAGGCTTCTCTCCCAAGTGGATGCT +
Preference number: 6 (lower is better)
Translates to: DNLSSNLAWPFC*GCGRLLSQVDA
Trigger: AGCATCCACTTGGGAGAGAAGCCTTCCACACCCCCAACAGAAGGGCCAGGCAAGATTCGAACTCAGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp GCAGGGGTTCCTGATTTTGCATTCTGGAGGTGTTCCTaGAGAAGCACATCAGAAGCTGGTCTGACTCGCTGT +
Preference number: 6 (lower is better)
Translates to: AGVPDFAFWRCS*RSTSEAGLTRC
Trigger: ACAGCGAGTCAGACCAGCTTCTGATGTGCTTCTCCAGGAACACCTCCAGAATGCAAAATCAGGAACCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp AGGTGCCCTCTAACACGCTCCTGCAGGAAACACCCTTaGATCCACTCTCTCTCTGTACCGAGGCTCTCTTAT +
Preference number: 6 (lower is better)
Translates to: RCPLTRSCRKHP*IHSLSVPRLSY
Trigger: ATAAGAGAGCCTCGGTACAGAGAGAGAGTGGATCAAAGGGTGTTTCCTGCAGGAGCGTGTTAGAGGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp GCTGTGGTTCTCTCATCTCTTGAGGTCTCCAGACTTGCAGGGTCTTaGGAGTCCTCAGGATTAGACGTGTTTGCTGCTACACAGCTTCGA +
Preference number: 6 (lower is better)
Translates to: AVVLSSLEVSRLAGS*ESSGLDVFAATQLR
Trigger: TCGAAGCTGTGTAGCAGCAAACACGTCTAATCCTGAGGACTCCAAAGACCCTGCAAGTCTGGAGACCTCAAGAGATGAGAGAACCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp CATTGGACCTCATTTCACTACTGTCACTTCTCCCCATaGGATGCCGTGACTGGATCCCTGAAGTCTGACTCC +
Preference number: 6 (lower is better)
Translates to: HWTSFHYCHFSP*DAVTGSLKSDS
Trigger: GGAGTCAGACTTCAGGGATCCAGTCACGGCATCTCATGGGGAGAAGTGACAGTAGTGAAATGAGGTCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp GATTGCTCATGTACACCTCTTTCAGGACACTCTTCCTaGGTAGAGAGCCGTTGGTCTTCCACTCCAGGAGTG +
Preference number: 6 (lower is better)
Translates to: DCSCTPLSGHSS*VESRWSSTPGV
Trigger: CACTCCTGGAGTGGAAGACCAACGGCTCTCTACTCAGGAAGAGTGTCCTGAAAGAGGTGTACATGAGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp TGTATACTGGGACATAGCTTCCTCTCCAAGGGGCAGTaGCTAGCACAACGAGCTAGCCTTTCAGGCATTTCT +
Preference number: 6 (lower is better)
Translates to: CILGHSFLSKGQ*LAQRASLSGIS
Trigger: AGAAATGCCTGAAAGGCTAGCTCGTTGTGCTAGCCACTGCCCCTTGGAGAGGAAGCTATGTCCCAGTATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp TCATCTTCTTGTACATCTTCATTGACCTCGGCCCCCTaGAGAAGCACATCAGAAGCTGGTCTGACTCGCTGT +
Preference number: 6 (lower is better)
Translates to: SSSCTSSLTSAP*RSTSEAGLTRC
Trigger: ACAGCGAGTCAGACCAGCTTCTGATGTGCTTCTCCAGGGGGCCGAGGTCAATGAAGATGTACAAGAAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS CAA 72 bp TGTAGCTTCCTCAGTCCCTCTAGAATGTGGCTTTCTTaGATACGGGTCGGAGGTAGTTCATCTGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: CSFLSPSRMWLS*IRVGGSSSAGL
Trigger: CAGCCCTGCAGATGAACTACCTCCGACCCGTATCAAAGAAAGCCACATTCTAGAGGGACTGAGGAAGCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp GACCTCATTCTTGTCTGTGGCGCAGAGACACAGCCATaGGACCTCATTTCACTACTGTCACTTCTCCCCATG +
Preference number: 6 (lower is better)
Translates to: DLILVCGAETQP*DLISLLSLLPM
Trigger: CATGGGGAGAAGTGACAGTAGTGAAATGAGGTCCAATGGCTGTGTCTCTGCGCCACAGACAAGAATGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp CTGAGCCAGAGTGTTTCAAGGCAGGGGTTCCTGATTTaGCATTCTGGAGGTGTTCCTGGAGAAGCACATCAG +
Preference number: 6 (lower is better)
Translates to: LSQSVSRQGFLI*HSGGVPGEAHQ
Trigger: CTGATGTGCTTCTCCAGGAACACCTCCAGAATGCAAAATCAGGAACCCCTGCCTTGAAACACTCTGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp CTTCTCTCATCACTGCTCTCTATGTGTAGCTCGTTTAGGGTCTCATaGTCATCGGTATCTGAGAGCTGCAGGTTCAGAGGCACATGGCCA +
Preference number: 6 (lower is better)
Translates to: LLSSLLSMCSSFRVS*SSVSESCRFRGTWP
Trigger: TGGCCATGTGCCTCTGAACCTGCAGCTCTCAGATACCGATGACAATGAGACCCTAAACGAGCTACACATAGAGAGCAGTGATGAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp AGGGGAAAGGTTCCAATCCCGCTGTCCAGTGTTCTCATCTGGCAGTaGGATTCTATCATGTGGCTCTGGAGAGTAGTGTCAGCAACTCTA +
Preference number: 6 (lower is better)
Translates to: RGKVPIPLSSVLIWQ*DSIMWLWRVVSATL
Trigger: TAGAGTTGCTGACACTACTCTCCAGAGCCACATGATAGAATCCAACTGCCAGATGAGAACACTGGACAGCGGGATTGGAACCTTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CAA 90 bp CTTCTGTGTTGCTCCCTGAGTTGTGCCAGCAGGTGCTCGATGCATTaGTTAGAGTCCATGTATTCCACAAGACTGCTGTCCAGAGAGAGT +
Preference number: 6 (lower is better)
Translates to: LLCCSLSCASRCSMH*LESMYSTRLLSRES
Trigger: ACTCTCTCTGGACAGCAGTCTTGTGGAATACATGGACTCTAACAAATGCATCGAGCACCTGCTGGCACAACTCAGGGAGCAACACAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000162646.8
CDS TCA 72 bp GATATGAGGAACCTGGGCAGGGTGTTTTGGAATGTGTaGTTCTGGCTGTACATCACAGAGAGAACCAGGGCT +
Preference number: 6 (lower is better)
Translates to: DMRNLGRVFWNV*FWLYITERTRA
Trigger: AGCCCTGGTTCTCTCTGTGATGTACAGCCAGAATCACACATTCCAAAACACCCTGCCCAGGTTCCTCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp CTCCATTCATGCCTAGAGCAGGCTTTAGGTGTGGCTTaGTGGAGGAGAAGGATCTTTTTATGGCTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: LHSCLEQALGVA*WRRRIFLWLCC
Trigger: ACAGCAGAGCCATAAAAAGATCCTTCTCCTCCAGCAAGCCACACCTAAAGCCTGCTCTAGGCATGAATGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp GGGCGGACACTCCTTGAGGCTGCTGGTTTTAATTCCTaGCGAATAGATCCCTTCATTCGAGTTCATGCAATC +
Preference number: 6 (lower is better)
Translates to: GRTLLEAAGFNS*RIDPFIRVHAI
Trigger: GATTGCATGAACTCGAATGAAGGGATCTATTCGCCAGGAATTAAAACCAGCAGCCTCAAGGAGTGTCCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp GTCAAGGACTCATTCACTCCTGAGAAGGAAGGCCTGTaGGGCATCACAGTGCTGTCACTCAACTGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: VKDSFTPEKEGL*GITVLSLNCLF
Trigger: AAAAAGACAGTTGAGTGACAGCACTGTGATGCCCCACAGGCCTTCCTTCTCAGGAGTGAATGAGTCCTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp GGAAAGGTTCCAATCCCGCTGTCCAGTGTTCTCATCTaGCAGTTGGATTCTATCATGTGGCTCTGGAGAGTA +
Preference number: 6 (lower is better)
Translates to: GKVPIPLSSVLI*QLDSIMWLWRV
Trigger: TACTCTCCAGAGCCACATGATAGAATCCAACTGCCAGATGAGAACACTGGACAGCGGGATTGGAACCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CAA 72 bp TCGGAGGTAGTTCATCTGCAGGGCTGGCGAAGCCACTaGGGAGCGAAGAATCAATACTTAGTCTTTTATCCC +
Preference number: 6 (lower is better)
Translates to: SEVVHLQGWRSH*GAKNQYLVFYP
Trigger: GGGATAAAAGACTAAGTATTGATTCTTCGCTCCCAAGTGGCTTCGCCAGCCCTGCAGATGAACTACCTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp TCACTGCTCTCTATGTGTAGCTCGTTTAGGGTCTCATaGTCATCGGTATCTGAGAGCTGCAGGTTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: SLLSMCSSFRVS*SSVSESCRFRG
Trigger: GCCTCTGAACCTGCAGCTCTCAGATACCGATGACAATGAGACCCTAAACGAGCTACACATAGAGAGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp GAAGTTTCTAGCTTAGATATCCCACTTGTTTCCAAATaGCTTGGGCGCTGCATCCTCCCTGGAACGTGCAGG +
Preference number: 6 (lower is better)
Translates to: EVSSLDIPLVSK*LGRCILPGTCR
Trigger: CCTGCACGTTCCAGGGAGGATGCAGCGCCCAAGCAATTTGGAAACAAGTGGGATATCTAAGCTAGAAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp GTTCCAATCCCGCTGTCCAGTGTTCTCATCTGGCAGTaGGATTCTATCATGTGGCTCTGGAGAGTAGTGTCA +
Preference number: 6 (lower is better)
Translates to: VPIPLSSVLIWQ*DSIMWLWRVVS
Trigger: TGACACTACTCTCCAGAGCCACATGATAGAATCCAACTGCCAGATGAGAACACTGGACAGCGGGATTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CAA 90 bp GTGACACATTCTTCCGAAGAGGTCCTCTTGACAACCCTTTGTTGCTaGATGAAACTGAATGCCTTCGGGCTAGTCTCTAAGTGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: VTHSSEEVLLTTLCC*MKLNAFGLVSKWVG
Trigger: TCCCACCCACTTAGAGACTAGCCCGAAGGCATTCAGTTTCATCAAGCAACAAAGGGTTGTCAAGAGGACCTCTTCGGAAGAATGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp CTGGAGACAGGCTTTTACAAGATGTCACCTCTAGCAGTTCACAGCTaGAAGGACAAGTCTTGGGTGTCTGTAAGTCTGTGTCCATGTGGG +
Preference number: 6 (lower is better)
Translates to: LETGFYKMSPLAVHS*KDKSWVSVSLCPCG
Trigger: CCCACATGGACACAGACTTACAGACACCCAAGACTTGTCCTTCAAGCTGTGAACTGCTAGAGGTGACATCTTGTAAAAGCCTGTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp GGTGGGCATAGACTCCACAAGTTTGGATTTCTGAGGTaGAGACTTGCCTCTGGAAGGGATTTTTGTCAGACC +
Preference number: 6 (lower is better)
Translates to: GGHRLHKFGFLR*RLASGRDFCQT
Trigger: GGTCTGACAAAAATCCCTTCCAGAGGCAAGTCTTCACCTCAGAAATCCAAACTTGTGGAGTCTATGCCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp CTACAGGATGAGGAAGAGGAGGATGGACTGTTAACCTaGGGTGTCAAGGACTCATTCACTCCTGAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: LQDEEEEDGLLT*GVKDSFTPEKE
Trigger: TTCCTTCTCAGGAGTGAATGAGTCCTTGACACCTCAGGTTAACAGTCCATCCTCCTCTTCCTCATCCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp CTCCTCTTCAGGTCTCTTCAGAAAAGGACAGTCTCTTaGAGTAGCTCCTGCCTGGAAGTGAGTAATTTCCTG +
Preference number: 6 (lower is better)
Translates to: LLFRSLQKRTVS*SSSCLEVSNFL
Trigger: CAGGAAATTACTCACTTCCAGGCAGGAGCTACTGCAAGAGACTGTCCTTTTCTGAAGAGACCTGAAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp CAACTGAGGAGACTTCATGAGAACTTTGAGTCCTACTaGGAGGCGAGTTTTAGGTCCTTTCTCGGGAGAGTT +
Preference number: 6 (lower is better)
Translates to: QLRRLHENFESY*EASFRSFLGRV
Trigger: AACTCTCCCGAGAAAGGACCTAAAACTCGCCTCCCAGTAGGACTCAAAGTTCTCATGAAGTCTCCTCAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp CTTGGCAGGTTCTTCCTTTTTCTGCTCTGGAGATCCTaGGCTCTGCAACAGACTTCGGACAGTTTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: LGRFFLFLLWRS*ALQQTSDSFFH
Trigger: ATGGAAGAAACTGTCCGAAGTCTGTTGCAGAGCCAAGGATCTCCAGAGCAGAAAAAGGAAGAACCTGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000160693.2
ENSMUST00000161954.8
ENSMUST00000162646.8
ENSMUST00000162877.8
CDS CAA 72 bp AAGAGGAGATGGATGCCTATGGTGGTCACTGCTAGATaGCTCATGTACACCTCTTTCAGGACACTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: KRRWMPMVVTAR*LMYTSFRTLFL
Trigger: CAGGAAGAGTGTCCTGAAAGAGGTGTACATGAGCAATCTAGCAGTGACCACCATAGGCATCCATCTCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp TTACAAGATGTCACCTCTAGCAGTTCACAGCTTGAAGGACAAGTCTaGGGTGTCTGTAAGTCTGTGTCCATGTGGGCAGTTCCTAGTGCA +
Preference number: 6 (lower is better)
Translates to: LQDVTSSSSQLEGQV*GVCKSVSMWAVPSA
Trigger: TGCACTAGGAACTGCCCACATGGACACAGACTTACAGACACCCAAGACTTGTCCTTCAAGCTGTGAACTGCTAGAGGTGACATCTTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 90 bp GTAGTGTCAGCAACTCTATCTTCTTCATCTTCTTGTACATCTTCATaGACCTCGGCCCCCTGGAGAAGCACATCAGAAGCTGGTCTGACT +
Preference number: 6 (lower is better)
Translates to: VVSATLSSSSSCTSS*TSAPWRSTSEAGLT
Trigger: AGTCAGACCAGCTTCTGATGTGCTTCTCCAGGGGGCCGAGGTCAATGAAGATGTACAAGAAGATGAAGAAGATAGAGTTGCTGACACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS CAA 90 bp TCTTATTGGAAATTTTGGGGATATGAGGAACCTGGGCAGGGTGTTTaGGAATGTGTGATTCTGGCTGTACATCACAGAGAGAACCAGGGC +
Preference number: 6 (lower is better)
Translates to: SYWKFWGYEEPGQGV*ECVILAVHHRENQG
Trigger: GCCCTGGTTCTCTCTGTGATGTACAGCCAGAATCACACATTCCAAAACACCCTGCCCAGGTTCCTCATATCCCCAAAATTTCCAATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp GCTACCTCATCAAGACATCGCTCATACTGTTCTCTCTaGTTCTCGTTTTCCAGTGCCAGTGCTGAATTCTCC +
Preference number: 6 (lower is better)
Translates to: ATSSRHRSYCSL*FSFSSASAEFS
Trigger: GGAGAATTCAGCACTGGCACTGGAAAACGAGAATCAGAGAGAACAGTATGAGCGATGTCTTGATGAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS TCA 72 bp AGCATGGTGGGCATAGACTCCACAAGTTTGGATTTCTaGGGTGAAGACTTGCCTCTGGAAGGGATTTTTGTC +
Preference number: 6 (lower is better)
Translates to: SMVGIDSTSLDF*GEDLPLEGIFV
Trigger: GACAAAAATCCCTTCCAGAGGCAAGTCTTCACCTCAGAAATCCAAACTTGTGGAGTCTATGCCCACCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp AGGCTCTCTTATCAACTCTGTTTAGAAGTTCTGTCATaGAGGCATCTTTTGTTGGGCACACAGCAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RLSYQLCLEVLS*RHLLLGTQQGW
Trigger: CCAGCCCTGCTGTGTGCCCAACAAAAGATGCCTTCATGACAGAACTTCTAAACAGAGTTGATAAGAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp ACATTCTTCCGAAGAGGTCCTCTTGACAACCCTTTGTaGCTTGATGAAACTGAATGCCTTCGGGCTAGTCTC +
Preference number: 6 (lower is better)
Translates to: TFFRRGPLDNPL*LDETECLRASL
Trigger: GAGACTAGCCCGAAGGCATTCAGTTTCATCAAGCAACAAAGGGTTGTCAAGAGGACCTCTTCGGAAGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp GACACATTCTTCCGAAGAGGTCCTCTTGACAACCCTTaGTTGCTTGATGAAACTGAATGCCTTCGGGCTAGT +
Preference number: 6 (lower is better)
Translates to: DTFFRRGPLDNP*LLDETECLRAS
Trigger: ACTAGCCCGAAGGCATTCAGTTTCATCAAGCAACAAAGGGTTGTCAAGAGGACCTCTTCGGAAGAATGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp GCAACTCTATCTTCTTCATCTTCTTGTACATCTTCATaGACCTCGGCCCCCTGGAGAAGCACATCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: ATLSSSSSCTSS*TSAPWRSTSEA
Trigger: AGCTTCTGATGTGCTTCTCCAGGGGGCCGAGGTCAATGAAGATGTACAAGAAGATGAAGAAGATAGAGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094609.10
ENSMUST00000162877.8
CDS CAA 90 bp CAAGTTTGGATTTCTGAGGTGAAGACTTGCCTCTGGAAGGGATTTTaGTCAGACCTTGCTTTGTGTAGACACCCATGTTTCCAACAGGTC +
Preference number: 6 (lower is better)
Translates to: QVWISEVKTCLWKGF*SDLALCRHPCFQQV
Trigger: GACCTGTTGGAAACATGGGTGTCTACACAAAGCAAGGTCTGACAAAAATCCCTTCCAGAGGCAAGTCTTCACCTCAGAAATCCAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp TCAACTTTACACACTCCTCCCTCAGATCCTTTTGAGTaGGTAGAGCTCGAACAACTTGGTTGGCTACCTCAT +
Preference number: 6 (lower is better)
Translates to: STLHTPPSDPFE*VELEQLGWLPH
Trigger: ATGAGGTAGCCAACCAAGTTGTTCGAGCTCTACTCACTCAAAAGGATCTGAGGGAGGAGTGTGTAAAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS TCA 72 bp CTTCATGTGCATCCTCATGAGAATTTGCATCATAGATaGATGTCTGATGGAGATTCTGGCAGGGGATCCCCA +
Preference number: 6 (lower is better)
Translates to: LHVHPHENLHHR*MSDGDSGRGSP
Trigger: TGGGGATCCCCTGCCAGAATCTCCATCAGACATTCATCTATGATGCAAATTCTCATGAGGATGCACATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp CTCACGACACTAGTCCCAGTTGAAGAAGCATCTGGATaGCTTCCAGAAGTTTCTAGCTTAGATATCCCACTT +
Preference number: 6 (lower is better)
Translates to: LTTLVPVEEASG*LPEVSSLDIPL
Trigger: AAGTGGGATATCTAAGCTAGAAACTTCTGGAAGGCATCCAGATGCTTCTTCAACTGGGACTAGTGTCGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp TCAATACTTAGTCTTTTATCCCAGATCCGCGATGATTaGCTTTTCCCAATGAGCTTCCTGTCTTGCCACGTG +
Preference number: 6 (lower is better)
Translates to: SILSLLSQIRDD*LFPMSFLSCHV
Trigger: CACGTGGCAAGACAGGAAGCTCATTGGGAAAAGGCAATCATCGCGGATCTGGGATAAAAGACTAAGTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp AAATTTTGGGGATATGAGGAACCTGGGCAGGGTGTTTaGGAATGTGTGATTCTGGCTGTACATCACAGAGAG +
Preference number: 6 (lower is better)
Translates to: KFWGYEEPGQGV*ECVILAVHHRE
Trigger: CTCTCTGTGATGTACAGCCAGAATCACACATTCCAAAACACCCTGCCCAGGTTCCTCATATCCCCAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp GGCTTTTACAAGATGTCACCTCTAGCAGTTCACAGCTaGAAGGACAAGTCTTGGGTGTCTGTAAGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: GFYKMSPLAVHS*KDKSWVSVSLC
Trigger: ACACAGACTTACAGACACCCAAGACTTGTCCTTCAAGCTGTGAACTGCTAGAGGTGACATCTTGTAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS TCA 72 bp TTGGTTATAAATGTCTTGGGATACTTTCAGACTCTCTaGGCTTTGCAGACCATCGTCTGGACTCTGACCATC +
Preference number: 6 (lower is better)
Translates to: LVINVLGYFQTL*ALQTIVWTLTI
Trigger: GATGGTCAGAGTCCAGACGATGGTCTGCAAAGCTCAGAGAGTCTGAAAGTATCCCAAGACATTTATAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp CAGATGGTTTCTTCTGTATTTCTGACATCACTGGACTaGAAGAGACAAGAGGAGCAGAGGATCCTTTCAACA +
Preference number: 6 (lower is better)
Translates to: QMVSSVFLTSLD*KRQEEQRILST
Trigger: TGTTGAAAGGATCCTCTGCTCCTCTTGTCTCTTCCAGTCCAGTGATGTCAGAAATACAGAAGAAACCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CCA 72 bp GTTCTCATCTGGCAGTTGGATTCTATCATGTGGCTCTaGAGAGTAGTGTCAGCAACTCTATCTTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: VLIWQLDSIMWL*RVVSATLSSSS
Trigger: AGATGAAGAAGATAGAGTTGCTGACACTACTCTCCAGAGCCACATGATAGAATCCAACTGCCAGATGAGAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000057846.15
ENSMUST00000094609.10
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
ENSMUST00000162877.8
CDS CAA 72 bp ATTTCTGAGGTGAAGACTTGCCTCTGGAAGGGATTTTaGTCAGACCTTGCTTTGTGTAGACACCCATGTTTC +
Preference number: 6 (lower is better)
Translates to: ISEVKTCLWKGF*SDLALCRHPCF
Trigger: GAAACATGGGTGTCTACACAAAGCAAGGTCTGACAAAAATCCCTTCCAGAGGCAAGTCTTCACCTCAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp AGCAGGGCTGGGTCTATTCCTTGGCTCCAACTTCATTaGGTTATAAATGTCTTGGGATACTTTCAGACTCTC +
Preference number: 6 (lower is better)
Translates to: SRAGSIPWLQLH*VINVLGYFQTL
Trigger: GAGAGTCTGAAAGTATCCCAAGACATTTATAACCAAATGAAGTTGGAGCCAAGGAATAGACCCAGCCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS CAA 72 bp GCAACTCTATCTTCTTCATCTTCTTGTACATCTTCATaGACCTCGGCCCCCAAGGATTCTCTTGGTTTTTCC +
Preference number: 6 (lower is better)
Translates to: ATLSSSSSCTSS*TSAPKDSLGFS
Trigger: GGAAAAACCAAGAGAATCCTTGGGGGCCGAGGTCAATGAAGATGTACAAGAAGATGAAGAAGATAGAGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000057846.15
ENSMUST00000094610.5
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp GGATGGGAGTTCTTCATGTGCATCCTCATGAGAATTTaGATCATAGATGAATGTCTGATGGAGATTCTGGCA +
Preference number: 6 (lower is better)
Translates to: GWEFFMCILMRI*IIDECLMEILA
Trigger: TGCCAGAATCTCCATCAGACATTCATCTATGATGCAAATTCTCATGAGGATGCACATGAAGAACTCCCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8
CDS GCA 72 bp CTTCATTCGAGTTCATGCAATCTTTATAACCCCATTTaGTTATCACCAATGATGGTGATTCAAGGAACACTT +
Preference number: 6 (lower is better)
Translates to: LHSSSCNLYNPI*LSPMMVIQGTL
Trigger: AAGTGTTCCTTGAATCACCATCATTGGTGATAAGCAAATGGGGTTATAAAGATTGCATGAACTCGAATGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057846.15
ENSMUST00000112583.8
ENSMUST00000161954.8