Pregenerated sensors for NCKAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027002Ensembl transcript IDs: ENSMUST00000028386.12, ENSMUST00000111760.3
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGGGCGGCAGCATGTGCTaGTGTCTGAGAACCTCGGAA | + |
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Preference number: 2 (lower is better) Translates to: SVWLFIIQQGKGSADASRGGSMC*CLRTSE Trigger: TTCCGAGGTTCTCAGACAGCAGCACATGCTGCCGCC...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| 3UTR-3UTR GCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACGGCGGCAGCATGTGCTaGTGTCTGAGAACCTCGGAA | + |
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Preference number: 2 (lower is better) Translates to: FGTTICINSCQVSGCLLYGGSMC*CLRTSE Trigger: TTCCGAGGTTCTCAGACAGCAGCACATGCTGCCGCC...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| 3UTR TCA 72 bp | GGCTTTCTACAGGCGGCGGCAGCATGTGCTGCTGTCTaGGAACCTCGGAACCTGCTTCCGATGCTCAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: GFLQAAAACAAV*EPRNLLPMLKL Trigger: CAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACATGCTGCCGCCGCCTGTAGAAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| 3UTR GCA 72 bp | GTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATaGTCAAGTTGTCTGCCATGTGGAAGGTTAAACCGC | + |
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Preference number: 3 (lower is better) Translates to: VLLSENLGTCFR*SSCLPCGRLNR Trigger: GCGGTTTAACCTTCCACATGGCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCCCAGCTTCTGCTGACTaGGCTGCAGCACGGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCPASAD*AAARSA Trigger: CGCGCTCCGTGCTGCAGCCCAGTCAGCAGAAGCTGG...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTACCAGCTTCTGCTGACTaGGCTGCAGCACGGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLPASAD*AAARSA Trigger: CGCGCTCCGTGCTGCAGCCCAGTCAGCAGAAGCTGG...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTACCAAGCAGGCCAGGCTaGTCAGAGAGGACAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLPSRPG*SERTVA Trigger: GGCCACTGTCCTCTCTGACCAGCCTGGCCTGCTTGG...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACTGTTGTAGAGGCGCGTaGGCATGCCGACGCCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNCCRGA*ACRRPG Trigger: ACCGGGGCGTCGGCATGCTCACGCGCCTCTACAACA...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCATCTGCACTCTTCTTTaGCATGTTGTCCGCGTGACG | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCICTLL*HVVRVT Trigger: CGTCACGCGGACAACATGCCAAAGAAGAGTGCAGAT...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGTGCAGGGCTGTACTGTaGCATTACATTGCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRCRAVL*HYIAGQ Trigger: CTGGCCAGCAATGTAATGTCACAGTACAGCCCTGCA...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATATGTTGTAGAGGCGCGTaGGCATGCCGACGCCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNICCRGA*ACRRPG Trigger: ACCGGGGCGTCGGCATGCTCACGCGCCTCTACAACA...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAGTGCAGCTCATGAAGTaGGTGCAGAGCAGAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLVQLMK*VQSRGK Trigger: CTTTCCTCTGCTCTGCACTCACTTCATGAGCTGCAC...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCGCTGTTGATTGTTGTTaGGCGTTTCTACAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCAVDCC*AFLQQE Trigger: TTCCTGCTGTAGAAACGCGCAACAACAATCAACAGC...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGATGAGACTCAGCAACTaGGCATTCCTCCACTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRMRLSN*AFLHWS Trigger: AGACCAGTGGAGGAATGCCCAGTTGCTGAGTCTCAT...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACCCAAGCAGGCCAGGCTaGTCAGAGAGGACAGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYPSRPG*SERTVA Trigger: GGCCACTGTCCTCTCTGACCAGCCTGGCCTGCTTGG...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCAAAGCTGCAGCAATCTaGTTGATGGCTTTGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCKAAAI*LMALAK Trigger: TTTGGCCAAAGCCATCAACCAGATTGCTGCAGCTTT...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCAGGCAAGAGCTACTCTaGAGAGCTAGCTTCCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELRQELL*RASFQR Trigger: CCTTTGGAAGCTAGCTCTTCAGAGTAGCTCTTGCCT...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGCTGCAGCAATCTGGTTaGTGGCTTTGGCCAAACAAT | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRLQQSG*WLWPNN Trigger: ATTGTTTGGCCAAAGCCATCAACCAGATTGCTGCAG...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAGGCATAGTGTCCGACTaGGCAGGATTAAGCATTGTG | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLGIVSD*AGLSIV Trigger: CACAATGCTTAATCCTGCGCAGTCGGACACTATGCC...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGCATGAAAACAAAAAGTaGCTTGGGACCAAGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRHENKK*LGTKQA Trigger: GGCCTGCTTGGTCCCAAGGCACTTTTTGTTTTCATG...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCATGGTTTTGGCACAATaGTTCGGCAATAACTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCMVLAQ*FGNNWS Trigger: TGACCAGTTATTGCCGAAGCATTGTGCCAAAACCAT...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGGCCTGTTTTTCCTCATaGTCTCCACACCCGGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRACFSS*SPHPVF Trigger: AAAAACCGGGTGTGGAGAGCATGAGGAAAAACAGGC...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCGGTCAGAGAGGACAGTaGCCAGTTCTTTTAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELGQRGQ*PVLLVQ Trigger: CTGCACTAAAAGAACTGGCCACTGTCCTCTCTGACC...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCATGGTTGGTTCTCCATaGCTGTCTAAGTGTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCMVGSP*LSKCCV Trigger: AACACAACACTTAGACAGCCATGGAGAACCAACCAT...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAATCTGCAAGGCTAAGTaGAGCTTTGGAGACGCTAGT | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLICKAK*SFGDAS Trigger: ACTAGCGTCTCCAAAGCTTCACTTAGCCTTGCAGAT...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCGATCCATTTCTCCATTaGATCCAAGGAGAGATATTC | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCDPFLH*IQGEIF Trigger: GAATATCTCTCCTTGGATGCAATGGAGAAATGGATC...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCGAAAGAGACTTGCTATaGGGTACAAATTCTTCCATC | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCERDLL*GTNSSI Trigger: GATGGAAGAATTTGTACCCCATAGCAAGTCTCTTTC...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCGCAGAGGAAAGGCAATaGAGTATCTTGACTGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELAEERQ*SILTER Trigger: CCTCTCAGTCAAGATACTCCATTGCCTTTCCTCTGC...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCCCACACCGCCATGTTTaGAACATAATTTATGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: MCCCLRTSEPASDAQVVCPHRHV*NIIYGE Trigger: TTCTCCATAAATTATGTTCCAAACATGGCGGTGTGG...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGCAATTTTCAGTAGACTaGATGATGCAAGCGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRQFSVD*MMQAPG Trigger: TCCTGGCGCTTGCATCATCCAGTCTACTGAAAATTG...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTATCTGCACAAGTTCATTaGGGACAACAGCATCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLSAQVH*GQQHQS Trigger: GCTTTGATGCTGTTGTCCTCAATGAACTTGTGCAGA...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | TGTCTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCGTGCAGCTCATGAAGTaGGTGCAGAGCAGAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: CLPCGRLNRVRYLVWQMFVQLMK*VQSRGK Trigger: CTTTCCTCTGCTCTGCACTCACTTCATGAGCTGCAC...GAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGGTTTCCCGAGGAATGTaGTCCTTGAAATCTTCAATG | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRVSRGM*SLKSSM Trigger: CATTGAAGATTTCAAGGATCACATTCCTCGGGAAAC...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACTGCAGGGCTGTACTGTaGCATTACATTGCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNCRAVL*HYIAGQ Trigger: CTGGCCAGCAATGTAATGTCACAGTACAGCCCTGCA...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGCAAACAGACAGGTTCTaGACAAGTTCATTGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRQTDRF*TSSLRT Trigger: TGTCCTCAATGAACTTGTGCAGAACCTGTCTGTTTG...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCCATCCAGGAACATATTaGACAGGGAAAGGCTACGAT | + |
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Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELHPGTY*TGKGYD Trigger: ATCGTAGCCTTTCCCTGTGCAATATGTTCCTGGATG...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTACATCCAGGAACATATTaGACAGGGAAAGGCTACGAT | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLHPGTY*TGKGYD Trigger: ATCGTAGCCTTTCCCTGTGCAATATGTTCCTGGATG...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTGTAGGCAAGGAAACTaGTACAAAGACCATCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELCRQGN*YKDHQE Trigger: CTCCTGATGGTCTTTGTAGCAGTTTCCTTGCCTACA...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACTGGGCATTCCTCCACTaGTCTGCTGAAAGGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNWAFLH*SAERFR Trigger: ACGGAACCTTTCAGCAGACCAGTGGAGGAATGCCCA...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAGATTTCGAGCTTGTTTaGCCATCTCATCCAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLDFELV*PSHPGT Trigger: TGTTCCTGGATGAGATGGCCAAACAAGCTCGAAATC...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR TCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAGTTTCCCGAGGAATGTaGTCCTTGAAATCTTCAATG | + |
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Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLVSRGM*SLKSSM Trigger: CATTGAAGATTTCAAGGATCACATTCCTCGGGAAAC...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACGGCATAGTGTCCGACTaGGCAGGATTAAGCATTGTG | + |
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Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNGIVSD*AGLSIV Trigger: CACAATGCTTAATCCTGCGCAGTCGGACACTATGCC...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGATACTTCCTGACATGTaGTCTAAGCTCTTCCATGTA | + |
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Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRILPDM*SKLFHV Trigger: TACATGGAAGAGCTTAGAGCACATGTCAGGAAGTAT...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS-3UTR CCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATCTGCACTCTTCTTTaGCATGTTGTCCGCGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNICTLL*HVVRVT Trigger: CGTCACGCGGACAACATGCCAAAGAAGAGTGCAGAT...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTGCTTCGGCAATAACTaGTCACTAAGAGTACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELCFGNN*SLRVHC Trigger: ACAGTGTACTCTTAGTGACCAGTTATTGCCGAAGCA...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCGCAACTTATCAAGGTTaGTCACTACCAGCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELATYQG*SLPACF Trigger: AAAACAGGCTGGTAGTGACCAACCTTGATAAGTTGC...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGGCACATAGTTCTCTATaGACTGGAGTACAGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SVWLFIIQQGKGSADASRAHSSL*TGVQSY Trigger: ATATGACTGTACTCCAGTCCATAGAGAACTATGTGC...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATACCTCCACTGGTCTGCTaGAAGGTTCCGTCTAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNIPPLVC*KVPSRI Trigger: TATCCTAGACGGAACCTTTCAGCAGACCAGTGGAGG...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCCAAAAGATAACGCCATaGAAACAAAAAGTGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELQKITP*KQKVPW Trigger: CCAAGGCACTTTTTGTTTTCATGGCGTTATCTTTTG...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTACAAAAGATAACGCCATaGAAACAAAAAGTGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLQKITP*KQKVPW Trigger: CCAAGGCACTTTTTGTTTTCATGGCGTTATCTTTTG...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTACTAATCTCATCCCTCTaGAATCAAACACTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLLISSL*NQTLLH Trigger: ATGGAGAAGTGTTTGATTTCAGAGGGATGAGATTAG...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATCTGCAAGGCTAAGTaGAGCTTTGGAGACGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNICKAK*SFGDAS Trigger: ACTAGCGTCTCCAAAGCTTCACTTAGCCTTGCAGAT...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCGATCCATTTCTCCATTaGATCCAAGGAGAGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELDPFLH*IQGEIF Trigger: GAATATCTCTCCTTGGATGCAATGGAGAAATGGATC...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATATGGGCATTCCTCCACTaGTCTGCTGAAAGGTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNIWAFLH*SAERFR Trigger: ACGGAACCTTTCAGCAGACCAGTGGAGGAATGCCCA...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCGTATTTAGCATCCCATaGCACAGAATAAAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELVFSIP*HRIKPK Trigger: CTTTGGCTTTATTCTGTGCCATGGGATGCTAAATAC...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACAGGCAAGAGCTACTCTaGAGAGCTAGCTTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYRQELL*RASFQR Trigger: CCTTTGGAAGCTAGCTCTTCAGAGTAGCTCTTGCCT...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACTCTGCACAAGTTCATTaGGGACAACAGCATCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNSAQVH*GQQHQS Trigger: GCTTTGATGCTGTTGTCCTCAATGAACTTGTGCAGA...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAAGTCATTCCAACAATTaGTTTAGTGAACCGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLSHSNN*FSEPDF Trigger: GAAATCCGGTTCACTAAATCAATTGTTGGAATGACT...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACCTGCAGCAATCTGGTTaGTGGCTTTGGCCAAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYLQQSG*WLWPNN Trigger: ATTGTTTGGCCAAAGCCATCAACCAGATTGCTGCAG...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCCATCTGAAAGAGACTTaGTATGGGGTACAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELHLKET*YGVQIL Trigger: AAGAATTTGTACCCCATAGCAAGTCTCTTTCAGATG...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACTCTCCATCTTCAACTTaGTTCACACTTAGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNSPSST*FTLREV Trigger: GACCTCCCTAAGTGTGAAGCAAGTTGAAGATGGAGA...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACGCCTGTTTTTCCTCATaGTCTCCACACCCGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYACFSS*SPHPVF Trigger: AAAAACCGGGTGTGGAGAGCATGAGGAAAAACAGGC...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACATGAGACTCAGCAACTaGGCATTCCTCCACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYMRLSN*AFLHWS Trigger: AGACCAGTGGAGGAATGCCCAGTTGCTGAGTCTCAT...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACGGTCAGAGAGGACAGTaGCCAGTTCTTTTAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYGQRGQ*PVLLVQ Trigger: CTGCACTAAAAGAACTGGCCACTGTCCTCTCTGACC...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAGTTTTATCTGTCTCTTaGCCAATTTTCAGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSSLHLRRNRRYRSELSLVLSVS*PIFSRL Trigger: CAGTCTACTGAAAATTGGCCAAGAGACAGATAAAAC...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACCTAGGATACACCATCTaGAGAGAAATTAGCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNLGYTI*REISAS Trigger: AGATGCGCTAATTTCTCTTCAGATGGTGTATCCTAG...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACAGCTCCAAGCACTGCTaGAACATCTTCTCAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYSSKHC*NIFSKA Trigger: TGCTTTTGAGAAGATGTTTCAGCAGTGCTTGGAGCT...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATACATGAAAACAAAAAGTaGCTTGGGACCAAGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNIHENKK*LGTKQA Trigger: GGCCTGCTTGGTCCCAAGGCACTTTTTGTTTTCATG...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACTCTCCATCTTCAACTTaGTTCACACTTAGGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYSPSST*FTLREV Trigger: GACCTCCCTAAGTGTGAAGCAAGTTGAAGATGGAGA...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCAACAATGTATATTGTTaGAGTGTCCTTCTATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MCTSSLHLRRNRRYRSELNNVYC*SVLLLQ Trigger: CTGCAATAGAAGGACACTGCAACAATATACATTGTT...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATAGCAGAGGAAAGGCAATaGAGTATCTTGACTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNIAEERQ*SILTER Trigger: CCTCTCAGTCAAGATACTCCATTGCCTTTCCTCTGC...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACGCAACTTATCAAGGTTaGTCACTACCAGCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNATYQG*SLPACF Trigger: AAAACAGGCTGGTAGTGACCAACCTTGATAAGTTGC...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACCAATTTTCAGTAGACTaGATGATGCAAGCGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYQFSVD*MMQAPG Trigger: TCCTGGCGCTTGCATCATCCAGTCTACTGAAAATTG...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCCTAATCTCATCCCTCTaGAATCAAACACTTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLPCGRLNRVRYLVWQMFLISSL*NQTLLH Trigger: ATGGAGAAGTGTTTGATTTCAGAGGGATGAGATTAG...GAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATAAGCTCCAAGCACTGCTaGAACATCTTCTCAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNISSKHC*NIFSKA Trigger: TGCTTTTGAGAAGATGTTTCAGCAGTGCTTGGAGCT...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACCAAACAGACAGGTTCTaGACAAGTTCATTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYQTDRF*TSSLRT Trigger: TGTCCTCAATGAACTTGTGCAGAACCTGTCTGTTTG...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATATGTAGGCAAGGAAACTaGTACAAAGACCATCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNICRQGN*YKDHQE Trigger: CTCCTGATGGTCTTTGTAGCAGTTTCCTTGCCTACA...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCGTATTTAGCATCCCATaGCACAGAATAAAGCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLPCGRLNRVRYLVWQMFVFSIP*HRIKPK Trigger: CTTTGGCTTTATTCTGTGCCATGGGATGCTAAATAC...GAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACGATTTCGAGCTTGTTTaGCCATCTCATCCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYDFELV*PSHPGT Trigger: TGTTCCTGGATGAGATGGCCAAACAAGCTCGAAATC...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACCTAGGATACACCATCTaGAGAGAAATTAGCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYLGYTI*REISAS Trigger: AGATGCGCTAATTTCTCTTCAGATGGTGTATCCTAG...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCCATTGTCAGGAATGGTaGTTCTTGTACAATCATATC | + |
|
Preference number: 4 (lower is better) Translates to: CLPCGRLNRVRYLVWQMFHCQEW*FLYNHI Trigger: GATATGATTGTACAAGAATCACCATTCCTGACAATG...GAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACATACTTCCTGACATGTaGTCTAAGCTCTTCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYILPDM*SKLFHV Trigger: TACATGGAAGAGCTTAGAGCACATGTCAGGAAGTAT...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATAATGGTTTTGGCACAATaGTTCGGCAATAACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNIMVLAQ*FGNNWS Trigger: TGACCAGTTATTGCCGAAGCATTGTGCCAAAACCAT...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACAGCAAGTCACAGACATaGTCCTTAAATTCCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNSKSQT*SLNSIT Trigger: TGTTATGGAATTTAAGGACCATGTCTGTGACTTGCT...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATATGCTTCGGCAATAACTaGTCACTAAGAGTACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PCGRLNRVRYLVWQMFNICFGNN*SLRVHC Trigger: ACAGTGTACTCTTAGTGACCAGTTATTGCCGAAGCA...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACCATTGTCAGGAATGGTaGTTCTTGTACAATCATATC | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYHCQEW*FLYNHI Trigger: GATATGATTGTACAAGAATCACCATTCCTGACAATG...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACCATCTGAAAGAGACTTaGTATGGGGTACAAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FGTTICINSCQVSGCLLYHLKET*YGVQIL Trigger: AAGAATTTGTACCCCATAGCAAGTCTCTTTCAGATG...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACCCACACCGCCATGTTTaGAACATAATTTATGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYPHRHV*NIIYGE Trigger: TTCTCCATAAATTATGTTCCAAACATGGCGGTGTGG...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACGCACATAGTTCTCTATaGACTGGAGTACAGTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYAHSSL*TGVQSY Trigger: ATATGACTGTACTCCAGTCCATAGAGAACTATGTGC...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR TCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACAGTCATTCCAACAATTaGTTTAGTGAACCGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYSHSNN*FSEPDF Trigger: GAAATCCGGTTCACTAAATCAATTGTTGGAATGACT...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACAGCAAGTCACAGACATaGTCCTTAAATTCCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYSKSQT*SLNSIT Trigger: TGTTATGGAATTTAAGGACCATGTCTGTGACTTGCT...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACGTTTTATCTGTCTCTTaGCCAATTTTCAGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYVLSVS*PIFSRL Trigger: CAGTCTACTGAAAATTGGCCAAGAGACAGATAAAAC...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR GCA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACCTCATACACATTCATTaGAACCTTCATATCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYLIHIH*NLHISF Trigger: GAAACTGATATGAAGGTTGCAATGAATGTGTATGAG...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS GCA 90 bp | ACAAGGCATAGTGTCCGACTGCGCAGGATTAAGCATTGTGCTGGGTaGACTGATGAGACTCAGCAACTGGGCATTCCTCCACTGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRHSVRLRRIKHCAG*TDETQQLGIPPLVC Trigger: GCAGACCAGTGGAGGAATGCCCAGTTGCTGAGTCTCATCAGTGCACCCAGCACAATGCTTAATCCTGCGCAGTCGGACACTATGCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CCA 90 bp | GCAGGATTAAGCATTGTGCTGGGTGCACTGATGAGACTCAGCAACTaGGCATTCCTCCACTGGTCTGCTGAAAGGTTCCGTCTAGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: AGLSIVLGALMRLSN*AFLHWSAERFRLGY Trigger: GTATCCTAGACGGAACCTTTCAGCAGACCAGTGGAGGAATGCCCAGTTGCTGAGTCTCATCAGTGCACCCAGCACAATGCTTAATCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CCA 90 bp | AAAGTGCCTTGGGACCAAGCAGGCCAGGCTGGTCAGAGAGGACAGTaGCCAGTTCTTTTAGTGCAGACCGTAAAAACTTGCGTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVPWDQAGQAGQRGQ*PVLLVQTVKTCVFL Trigger: GAGAAAGACGCAAGTTTTTACGGTCTGCACTAAAAGAACTGGCCACTGTCCTCTCTGACCAGCCTGGCCTGCTTGGTCCCAAGGCACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACCCGACGCCCCGGTCGTaGAGGATGGTGAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNPTPRS*RMVSFS Trigger: GGAGAAGCTCACCATCCTCAACGACCGGGGCGTCGG...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS GCA 90 bp | GCCAGTTCTTTTAGTGCAGACCGTAAAAACTTGCGTCTTTCTCTGTaGATTGAGCCGGCGTGGGATACAGCCGCCTCCTTGCATTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASSFSADRKNLRLSL*IEPAWDTAASLHSL Trigger: AAGAGAATGCAAGGAGGCGGCTGTATCCCACGCCGGCTCAATGCACAGAGAAAGACGCAAGTTTTTACGGTCTGCACTAAAAGAACTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACCCGACGCCCCGGTCGTaGAGGATGGTGAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FGTTICINSCQVSGCLLYPTPRS*RMVSFS Trigger: GGAGAAGCTCACCATCCTCAACGACCGGGGCGTCGG...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCGATACAGCCGCCTCCTaGCATTCTCTTATGTCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: MCCCLRTSEPASDAQVVCDTAAS*HSLMSL Trigger: TAACGACATAAGAGAATGCAAGGAGGCGGCTGTATC...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCAAAACAAAAAGTGCCTaGGGACCAAGCAGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MCTSSLHLRRNRRYRSELKTKSA*GPSRPG Trigger: GCCTGGCCTGCTTGGTCCCAAGGCACTTTTTGTTTT...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 90 bp | GCTCATGAAGTGAGTGCAGAGCAGAGGAAAGGCAATGGAGTATCTTaGCTGAGAGGGCAGCTCCAAGCACTGCTGAAACATCTTCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AHEVSAEQRKGNGVS*LRGQLQALLKHLLK Trigger: TTTGAGAAGATGTTTCAGCAGTGCTTGGAGCTGCCCTCTCAGTCAAGATACTCCATTGCCTTTCCTCTGCTCTGCACTCACTTCATGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS GCA 90 bp | GTTTTTGTCAATAAGGTAGGAGGGTTTAGCCTTGGGGTCGCCACATaGCTTCCAAACTTGTCCTTGCTTCTTGATGTTGTAGAGGCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VFVNKVGGFSLGVAT*LPNLSLLLDVVEAR Trigger: ACGCGCCTCTACAACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGTGGCGACCCCAAGGCTAAACCCTCCTACCTTATTGACAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGAGATTTCGAGCTTGTTaGGCCATCTCATCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SVWLFIIQQGKGSADASRRFRAC*AISSRN Trigger: GTTCCTGGATGAGATGGCCAAACAAGCTCGAAATCT...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTGCAGTGTCCTTCTATaGCAGGGCTGTACTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: MCTSSLHLRRNRRYRSELCSVLL*QGCTVT Trigger: TGTCACAGTACAGCCCTGCAATAGAAGGACACTGCA...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCACATGCCTTCCAAACTaGTCCTTGCTTCTTGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: MCCCLRTSEPASDAQVVCTCLPN*SLLLDV Trigger: AACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGT...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111760.3 |
||
| CDS TCA 90 bp | ATGTGGAAAACTTCATCCCGAAAGAGAGAGAGGCAAGAGCTACTCTaGAGAGCTAGCTTCCAAAGGTTCAGTGCGGTAGCCTCCGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: MWKTSSRKRERQELL*RASFQRFSAVASVF Trigger: AAATACGGAGGCTACCGCACTGAACCTTTGGAAGCTAGCTCTTCAGAGTAGCTCTTGCCTCTCTCTCTTTCGGGATGAAGTTTTCCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCAAAGCCAGAGAGGTATaGCACGTAGTACCTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: MCTSSLHLRRNRRYRSELKAREV*HVVPLH Trigger: ATGCAGAGGTACTACGTGCAATACCTCTCTGGCTTT...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAAGATTTCGAGCTTGTTaGGCCATCTCATCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSSLHLRRNRRYRSELSLRFRAC*AISSRN Trigger: GTTCCTGGATGAGATGGCCAAACAAGCTCGAAATCT...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCGATGAGATTTCGAGCTaGTTTGGCCATCTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MCTSSLHLRRNRRYRSELDEISS*FGHLIQ Trigger: CTGGATGAGATGGCCAAACAAGCTCGAAATCTCATC...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTAGATGAGATTTCGAGCTaGTTTGGCCATCTCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSLHLRRNRRYRSELSLDEISS*FGHLIQ Trigger: CTGGATGAGATGGCCAAACAAGCTCGAAATCTCATC...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCATCTGGTTGATGGCTTaGGCCAAACAATGTATATTG | + |
|
Preference number: 5 (lower is better) Translates to: MCCCLRTSEPASDAQVVCIWLMA*AKQCIL Trigger: CAATATACATTGTTTGGCCAAAGCCATCAACCAGAT...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 90 bp | TTCCTCCACTGGTCTGCTGAAAGGTTCCGTCTAGGATACACCATCTaGAGAGAAATTAGCGCATCTGAAAGAGACTTGCTATGGGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: FLHWSAERFRLGYTI*REISASERDLLWGT Trigger: TGTACCCCATAGCAAGTCTCTTTCAGATGCGCTAATTTCTCTTCAGATGGTGTATCCTAGACGGAACCTTTCAGCAGACCAGTGGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS GCA 90 bp | CATCCCATGGCACAGAATAAAGCCAAAGATGATCCATTTCTCCATTaGATCCAAGGAGAGATATTCACAAGGCATAGTGTCCGACTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HPMAQNKAKDDPFLH*IQGEIFTRHSVRLR Trigger: GCGCAGTCGGACACTATGCCTTGTGAATATCTCTCCTTGGATGCAATGGAGAAATGGATCATCTTTGGCTTTATTCTGTGCCATGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CCA 90 bp | AGCTTCCAAAGGTTCAGTGCGGTAGCCTCCGTATTTAGCATCCCATaGCACAGAATAAAGCCAAAGATGATCCATTTCTCCATTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SFQRFSAVASVFSIP*HRIKPKMIHFSIAS Trigger: GGATGCAATGGAGAAATGGATCATCTTTGGCTTTATTCTGTGCCATGGGATGCTAAATACGGAGGCTACCGCACTGAACCTTTGGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGGCATCTGAAAGAGACTaGCTATGGGGTACAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVWLFIIQQGKGSADASRASERD*LWGTNS Trigger: AGAATTTGTACCCCATAGCAAGTCTCTTTCAGATGC...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCGCAGACCGTAAAAACTaGCGTCTTTCTCTGTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: MCTSSLHLRRNRRYRSELADRKN*RLSLCI Trigger: AATGCACAGAGAAAGACGCAAGTTTTTACGGTCTGC...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACAAAACAAAAAGTGCCTaGGGACCAAGCAGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNKTKSA*GPSRPG Trigger: GCCTGGCCTGCTTGGTCCCAAGGCACTTTTTGTTTT...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACCATCTGCACTCTTCTTaGGCATGTTGTCCGCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNHLHSS*ACCPRD Trigger: GTCACGCGGACAACATGCCAAAGAAGAGTGCAGATG...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTATGCAACTTATCAAGGTaGGTCACTACCAGCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSSLHLRRNRRYRSELSLCNLSR*VTTSLF Trigger: AAACAGGCTGGTAGTGACCAACCTTGATAAGTTGCA...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCTCCCTACCCACACCGCCATGTTaGGAACATAATTTATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSSLHLRRNRRYRSELSLPTPPC*EHNLWR Trigger: TCTCCATAAATTATGTTCCAAACATGGCGGTGTGGG...TAGGGAGAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTGCTGTCTGAGAACCTCGGAACCTGCTTCCGATGCTCAAGTTGTCTGCGCCAAACAATGTATATaGTTGCAGTGTCCTTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: MCCCLRTSEPASDAQVVCAKQCI*LQCPSI Trigger: AATAGAAGGACACTGCAACAATATACATTGTTTGGC...GCAGACAACTTGAGCATCGGAAGCAGGTTCCGAGGTTCTCAGACAGCAGCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 90 bp | TTATCTATAAAGTCATCTGCACTCTTCTTTGGCATGTTGTCCGCGTaGCGGAGCAGCCAGATAATTTCATCACGGGCAAAAGATAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSIKSSALFFGMLSA*RSSQIISSRAKDNA Trigger: GGCGTTATCTTTTGCCCGTGATGAAATTATCTGGCTGCTCCGTCACGCGGACAACATGCCAAAGAAGAGTGCAGATGACTTTATAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACCATCTGCACTCTTCTTaGGCATGTTGTCCGCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FGTTICINSCQVSGCLLYHLHSS*ACCPRD Trigger: GTCACGCGGACAACATGCCAAAGAAGAGTGCAGATG...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACGCTGCAGCAATCTGGTaGATGGCTTTGGCCAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNAAAIW*MALAKQ Trigger: TTGTTTGGCCAAAGCCATCAACCAGATTGCTGCAGC...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACTGCAGTGTCCTTCTATaGCAGGGCTGTACTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FGTTICINSCQVSGCLLYCSVLL*QGCTVT Trigger: TGTCACAGTACAGCCCTGCAATAGAAGGACACTGCA...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCATTCCAAGAGATCCATaGTCAGGAATGGTGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MCTSSLHLRRNRRYRSELIPRDP*SGMVIL Trigger: AAGAATCACCATTCCTGACAATGGATCTCTTGGAAT...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTGGTTGTTTATTATACAGCAGGGTAAAGGCAGTGCAGATGCCAGCCGGAGAAGATGTAACACTTaGTTTGTAGACAGCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SVWLFIIQQGKGSADASRRRCNT*FVDSMV Trigger: TACCATGCTGTCTACAAACAAAGTGTTACATCTTCT...CCGGCTGGCATCTGCACTGCCTTTACCCTGCTGTATAATAAACAACCAGACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 90 bp | CATTCATTGCAACCTTCATATCAGTTTCCCGAGGAATGTGATCCTTaGAATCTTCAATGGAGCTCACGAGGAAAGGAATGTGGTAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HSLQPSYQFPEECDP*NLQWSSRGKECGRT Trigger: TGTCCTACCACATTCCTTTCCTCGTGAGCTCCATTGAAGATTTCAAGGATCACATTCCTCGGGAAACTGATATGAAGGTTGCAATGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 90 bp | ACAATGTATATTGTTGCAGTGTCCTTCTATTGCAGGGCTGTACTGTaGCATTACATTGCTGGCCAGTGTAGGCAAGGAAACTGCTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: TMYIVAVSFYCRAVL*HYIAGQCRQGNCYK Trigger: TTTGTAGCAGTTTCCTTGCCTACACTGGCCAGCAATGTAATGTCACAGTACAGCCCTGCAATAGAAGGACACTGCAACAATATACATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACAAAGCCAGAGAGGTATaGCACGTAGTACCTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FGTTICINSCQVSGCLLYKAREV*HVVPLH Trigger: ATGCAGAGGTACTACGTGCAATACCTCTCTGGCTTT...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACTGCAACTTATCAAGGTaGGTCACTACCAGCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNCNLSR*VTTSLF Trigger: AAACAGGCTGGTAGTGACCAACCTTGATAAGTTGCA...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACCCCACACCGCCATGTTaGGAACATAATTTATGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNPTPPC*EHNLWR Trigger: TCTCCATAAATTATGTTCCAAACATGGCGGTGTGGG...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCACATCCAGTCTCCATCTCAGAAGGAACCGTAGGTACAGATCAGAACTCGCTCATACACATTCATaGCAACCTTCATATCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MCTSSLHLRRNRRYRSELAHTHS*QPSYQF Trigger: AAACTGATATGAAGGTTGCAATGAATGTGTATGAGC...GAGTTCTGATCTGTACCTACGGTTCCTTCTGAGATGGAGACTGGATGTGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACTACTGTGACATTACATaGCTGGCCAGTGTAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FGTTICINSCQVSGCLLYYCDIT*LASVGK Trigger: CTTGCCTACACTGGCCAGCAATGTAATGTCACAGTA...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACGCTGCAGCAATCTGGTaGATGGCTTTGGCCAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYAAAIW*MALAKQ Trigger: TTGTTTGGCCAAAGCCATCAACCAGATTGCTGCAGC...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 90 bp | TCATACACATTCATTGCAACCTTCATATCAGTTTCCCGAGGAATGTaGTCCTTGAAATCTTCAATGGAGCTCACGAGGAAAGGAATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYTFIATFISVSRGM*SLKSSMELTRKGMW Trigger: CCACATTCCTTTCCTCGTGAGCTCCATTGAAGATTTCAAGGATCACATTCCTCGGGAAACTGATATGAAGGTTGCAATGAATGTGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACGATACAGCCGCCTCCTaGCATTCTCTTATGTCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYDTAAS*HSLMSL Trigger: TAACGACATAAGAGAATGCAAGGAGGCGGCTGTATC...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACGCAGACCGTAAAAACTaGCGTCTTTCTCTGTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: FGTTICINSCQVSGCLLYADRKN*RLSLCI Trigger: AATGCACAGAGAAAGACGCAAGTTTTTACGGTCTGC...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACTATATGCTCTTACGCTaGTTAGAAGCTCTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNYMLLR*LEALMA Trigger: AGCCATCAGAGCTTCTAACAAGCGTAAGAGCATATA...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCATCTGGTTGATGGCTTaGGCCAAACAATGTATATTG | + |
|
Preference number: 5 (lower is better) Translates to: CLPCGRLNRVRYLVWQMFIWLMA*AKQCIL Trigger: CAATATACATTGTTTGGCCAAAGCCATCAACCAGAT...GAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CTGCCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATTCCAAGAGATCCATaGTCAGGAATGGTGATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPCGRLNRVRYLVWQMFNIPRDP*SGMVIL Trigger: AAGAATCACCATTCCTGACAATGGATCTCTTGGAAT...GTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATATATATGCTCTTACGCTaGTTAGAAGCTCTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCGRLNRVRYLVWQMFNIYMLLR*LEALMA Trigger: AGCCATCAGAGCTTCTAACAAGCGTAAGAGCATATA...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CAGTTTACAGATAAAACAAGGCAACAGAAACTCGTGCTTGTCTTGAGTAAGTACCTTCCAAACTTGTCCTaGCTTCTTGATGTTGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QFTDKTRQQKLVLVLSKYLPNLS*LLDVVE Trigger: CTCTACAACATCAAGAAGCAAGGACAAGTTTGGAAG...GTACTTACTCAAGACAAGCACGAGTTTCTGTTGCCTTGTTTTATCTGTAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACGCCAAACAATGTATATaGTTGCAGTGTCCTTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: FGTTICINSCQVSGCLLYAKQCI*LQCPSI Trigger: AATAGAAGGACACTGCAACAATATACATTGTTTGGC...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | TTCGGGACTACCATCTGTATCAACAGTTGCCAAGTGTCTGGTTGTTTATTATACAGAAGATGTAACACTTaGTTTGTAGACAGCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FGTTICINSCQVSGCLLYRRCNT*FVDSMV Trigger: TACCATGCTGTCTACAAACAAAGTGTTACATCTTCT...GTATAATAAACAACCAGACACTTGGCAACTGTTGATACAGATGGTAGTCCCGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGAAGGTTAAACCGCGTTAGGTATTTAGTTTGGCAAATGTTCAACATAGCTCATACACATTCATaGCAACCTTCATATCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PCGRLNRVRYLVWQMFNIAHTHS*QPSYQF Trigger: AAACTGATATGAAGGTTGCAATGAATGTGTATGAGC...TATGTTGAACATTTGCCAAACTAAATACCTAACGCGGTTTAACCTTCCACATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 72 bp | AGCCTTGGGGTCGCCACATGCCTTCCAAACTTGTCCTaGCTTCTTGATGTTGTAGAGGCGCGTGAGCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGVATCLPNLS*LLDVVEAREHA Trigger: GGCATGCTCACGCGCCTCTACAACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGTGGCGACCCCAAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111760.3 |
||
| CDS GCA 72 bp | AGTGTCCGACTGCGCAGGATTAAGCATTGTGCTGGGTaGACTGATGAGACTCAGCAACTGGGCATTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SVRLRRIKHCAG*TDETQQLGIPP Trigger: TGGAGGAATGCCCAGTTGCTGAGTCTCATCAGTGCACCCAGCACAATGCTTAATCCTGCGCAGTCGGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CCA 72 bp | AGCATTGTGCTGGGTGCACTGATGAGACTCAGCAACTaGGCATTCCTCCACTGGTCTGCTGAAAGGTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SIVLGALMRLSN*AFLHWSAERFR Trigger: ACGGAACCTTTCAGCAGACCAGTGGAGGAATGCCCAGTTGCTGAGTCTCATCAGTGCACCCAGCACAATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CCA 72 bp | TGGGACCAAGCAGGCCAGGCTGGTCAGAGAGGACAGTaGCCAGTTCTTTTAGTGCAGACCGTAAAAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WDQAGQAGQRGQ*PVLLVQTVKTC Trigger: GCAAGTTTTTACGGTCTGCACTAAAAGAACTGGCCACTGTCCTCTCTGACCAGCCTGGCCTGCTTGGTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 90 bp | TCAGAGAGGACAGTGGCCAGTTCTTTTAGTGCAGACCGTAAAAACTaGCGTCTTTCTCTGTGCATTGAGCCGGCGTGGGATACAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SERTVASSFSADRKN*RLSLCIEPAWDTAA Trigger: GGCGGCTGTATCCCACGCCGGCTCAATGCACAGAGAAAGACGCAAGTTTTTACGGTCTGCACTAAAAGAACTGGCCACTGTCCTCTCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | GGCGCTCTTCAGGACACAGTTCATGTGTGCAGCTCATaGAGTGAGTGCAGAGCAGAGGAAAGGCAATGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GALQDTVHVCSS*SECRAEERQWS Trigger: ACTCCATTGCCTTTCCTCTGCTCTGCACTCACTTCATGAGCTGCACACATGAACTGTGTCCTGAAGAGCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS GCA 72 bp | TTTAGTGCAGACCGTAAAAACTTGCGTCTTTCTCTGTaGATTGAGCCGGCGTGGGATACAGCCGCCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSADRKNLRLSL*IEPAWDTAASL Trigger: CAAGGAGGCGGCTGTATCCCACGCCGGCTCAATGCACAGAGAAAGACGCAAGTTTTTACGGTCTGCACTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CCA 72 bp | GCACTGATGAGACTCAGCAACTGGGCATTCCTCCACTaGTCTGCTGAAAGGTTCCGTCTAGGATACACCATC | + |
|
Preference number: 6 (lower is better) Translates to: ALMRLSNWAFLH*SAERFRLGYTI Trigger: GATGGTGTATCCTAGACGGAACCTTTCAGCAGACCAGTGGAGGAATGCCCAGTTGCTGAGTCTCATCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | GAGACTCAGCAACTGGGCATTCCTCCACTGGTCTGCTaGAAGGTTCCGTCTAGGATACACCATCTGAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ETQQLGIPPLVC*KVPSRIHHLKR Trigger: TCTCTTCAGATGGTGTATCCTAGACGGAACCTTTCAGCAGACCAGTGGAGGAATGCCCAGTTGCTGAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | ACTTCATCCCGAAAGAGAGAGAGGCAAGAGCTACTCTaGAGAGCTAGCTTCCAAAGGTTCAGTGCGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSSRKRERQELL*RASFQRFSAVA Trigger: GGCTACCGCACTGAACCTTTGGAAGCTAGCTCTTCAGAGTAGCTCTTGCCTCTCTCTCTTTCGGGATGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | GTGAGTGCAGAGCAGAGGAAAGGCAATGGAGTATCTTaGCTGAGAGGGCAGCTCCAAGCACTGCTGAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: VSAEQRKGNGVS*LRGQLQALLKH Trigger: ATGTTTCAGCAGTGCTTGGAGCTGCCCTCTCAGTCAAGATACTCCATTGCCTTTCCTCTGCTCTGCACTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 72 bp | AGTGAGTGCAGAGCAGAGGAAAGGCAATGGAGTATCTaGACTGAGAGGGCAGCTCCAAGCACTGCTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SECRAEERQWSI*TERAAPSTAET Trigger: TGTTTCAGCAGTGCTTGGAGCTGCCCTCTCAGTCAAGATACTCCATTGCCTTTCCTCTGCTCTGCACTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS GCA 72 bp | TCCAAGGAGAGATATTCACAAGGCATAGTGTCCGACTaGGCAGGATTAAGCATTGTGCTGGGTGCACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SKERYSQGIVSD*AGLSIVLGALM Trigger: CATCAGTGCACCCAGCACAATGCTTAATCCTGCGCAGTCGGACACTATGCCTTGTGAATATCTCTCCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 72 bp | ACAGTGGCCAGTTCTTTTAGTGCAGACCGTAAAAACTaGCGTCTTTCTCTGTGCATTGAGCCGGCGTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TVASSFSADRKN*RLSLCIEPAWD Trigger: ATCCCACGCCGGCTCAATGCACAGAGAAAGACGCAAGTTTTTACGGTCTGCACTAAAAGAACTGGCCACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | AAGTCATCTGCACTCTTCTTTGGCATGTTGTCCGCGTaGCGGAGCAGCCAGATAATTTCATCACGGGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: KSSALFFGMLSA*RSSQIISSRAK Trigger: TTTTGCCCGTGATGAAATTATCTGGCTGCTCCGTCACGCGGACAACATGCCAAAGAAGAGTGCAGATGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | CCTCAGGGCAAACAGACAGGTTCTGCACAAGTTCATTaGGGACAACAGCATCAAAGCCAGAGAGGTATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PQGKQTGSAQVH*GQQHQSQRGIA Trigger: TGCAATACCTCTCTGGCTTTGATGCTGTTGTCCTCAATGAACTTGTGCAGAACCTGTCTGTTTGCCCTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 90 bp | TTGTTGCAGTGTCCTTCTATTGCAGGGCTGTACTGTGACATTACATaGCTGGCCAGTGTAGGCAAGGAAACTGCTACAAAGACCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQCPSIAGLYCDIT*LASVGKETATKTIR Trigger: CCTGATGGTCTTTGTAGCAGTTTCCTTGCCTACACTGGCCAGCAATGTAATGTCACAGTACAGCCCTGCAATAGAAGGACACTGCAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | AACATATTGCACAGGGAAAGGCTACGATCTCCTATATaGTGGCGCTCTTCAGGACACAGTTCATGTGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NILHRERLRSPI*WRSSGHSSCVQ Trigger: CTGCACACATGAACTGTGTCCTGAAGAGCGCCATCATATAGGAGATCGTAGCCTTTCCCTGTGCAATATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | ATTGTTGCAGTGTCCTTCTATTGCAGGGCTGTACTGTaGCATTACATTGCTGGCCAGTGTAGGCAAGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IVAVSFYCRAVL*HYIAGQCRQGN Trigger: GTTTCCTTGCCTACACTGGCCAGCAATGTAATGTCACAGTACAGCCCTGCAATAGAAGGACACTGCAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS GCA 72 bp | AATAAGGTAGGAGGGTTTAGCCTTGGGGTCGCCACATaGCTTCCAAACTTGTCCTTGCTTCTTGATGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: NKVGGFSLGVAT*LPNLSLLLDVV Trigger: TACAACATCAAGAAGCAAGGACAAGTTTGGAAGGCATGTGGCGACCCCAAGGCTAAACCCTCCTACCTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111760.3 |
||
| CDS CCA 72 bp | AGGGTTTTCATAGTCCACAATCATCTGACCAAGGCGTaGATATTCTCGGTCACTTGCTCCATGGGTCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVFIVHNHLTKA*IFSVTCSMGHF Trigger: GAAATGACCCATGGAGCAAGTGACCGAGAATATCCACGCCTTGGTCAGATGATTGTGGACTATGAAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CCA 72 bp | AGGTTCAGTGCGGTAGCCTCCGTATTTAGCATCCCATaGCACAGAATAAAGCCAAAGATGATCCATTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RFSAVASVFSIP*HRIKPKMIHFS Trigger: GGAGAAATGGATCATCTTTGGCTTTATTCTGTGCCATGGGATGCTAAATACGGAGGCTACCGCACTGAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 72 bp | TGTCCTTCTATTGCAGGGCTGTACTGTGACATTACATaGCTGGCCAGTGTAGGCAAGGAAACTGCTACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CPSIAGLYCDIT*LASVGKETATK Trigger: CTTTGTAGCAGTTTCCTTGCCTACACTGGCCAGCAATGTAATGTCACAGTACAGCCCTGCAATAGAAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | TGGTCTGCTGAAAGGTTCCGTCTAGGATACACCATCTaGAGAGAAATTAGCGCATCTGAAAGAGACTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: WSAERFRLGYTI*REISASERDLL Trigger: TAGCAAGTCTCTTTCAGATGCGCTAATTTCTCTTCAGATGGTGTATCCTAGACGGAACCTTTCAGCAGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 72 bp | TGGCCAAACAATGTATATTGTTGCAGTGTCCTTCTATaGCAGGGCTGTACTGTGACATTACATTGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPNNVYCCSVLL*QGCTVTLHCWP Trigger: TGGCCAGCAATGTAATGTCACAGTACAGCCCTGCAATAGAAGGACACTGCAACAATATACATTGTTTGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 72 bp | CTATGGACTGGAGTACAGTCATATATGCTCTTACGCTaGTTAGAAGCTCTGATGGCTTTGCAATTTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LWTGVQSYMLLR*LEALMALQFPV Trigger: CACAGGAAATTGCAAAGCCATCAGAGCTTCTAACAAGCGTAAGAGCATATATGACTGTACTCCAGTCCATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS CAA 90 bp | GTAGGCAAGGAAACTGCTACAAAGACCATCAGGAGACAAGCGATCTaGTATTCTTCCTCTGGACTAATGTTCTCTGATTTTTGTGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGKETATKTIRRQAI*YSSSGLMFSDFCEE Trigger: TTCCTCACAAAAATCAGAGAACATTAGTCCAGAGGAAGAATACAAGATCGCTTGTCTCCTGATGGTCTTTGTAGCAGTTTCCTTGCCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
||
| CDS TCA 72 bp | ATAAAGTTTCCAAGTACCAGTTTGTATACAGACTCGTaGTGGTTGGTTCTCCATGGCTGTCTAAGTGTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: IKFPSTSLYTDS*WLVLHGCLSVV Trigger: CACAACACTTAGACAGCCATGGAGAACCAACCATCACGAGTCTGTATACAAACTGGTACTTGGAAACTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS TCA 72 bp | TTCATTGCAACCTTCATATCAGTTTCCCGAGGAATGTaGTCCTTGAAATCTTCAATGGAGCTCACGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: FIATFISVSRGM*SLKSSMELTRK Trigger: TTTCCTCGTGAGCTCCATTGAAGATTTCAAGGATCACATTCCTCGGGAAACTGATATGAAGGTTGCAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS GCA 72 bp | GCACAGAATAAAGCCAAAGATGATCCATTTCTCCATTaGATCCAAGGAGAGATATTCACAAGGCATAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AQNKAKDDPFLH*IQGEIFTRHSV Trigger: GACACTATGCCTTGTGAATATCTCTCCTTGGATGCAATGGAGAAATGGATCATCTTTGGCTTTATTCTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS CAA 72 bp | GAAACTGCTACAAAGACCATCAGGAGACAAGCGATCTaGTATTCTTCCTCTGGACTAATGTTCTCTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: ETATKTIRRQAI*YSSSGLMFSDF Trigger: AAAATCAGAGAACATTAGTCCAGAGGAAGAATACAAGATCGCTTGTCTCCTGATGGTCTTTGTAGCAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS TCA 72 bp | AGGAATTCCTTAAGTCGGTCTTCAATACTTCCTTTGTaGATTGTAAACAAAGCTGCAGCAATCTGGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: RNSLSRSSILPL*IVNKAAAIWLM Trigger: CATCAACCAGATTGCTGCAGCTTTGTTTACAATTCACAAAGGAAGTATTGAAGACCGACTTAAGGAATTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS CAA 72 bp | GCAACACATAAGGAAAACAAGATTCCAAGAGATCCATaGTCAGGAATGGTGATTCTTGTACAATCATATCCA | + |
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Preference number: 6 (lower is better) Translates to: ATHKENKIPRDP*SGMVILVQSYP Trigger: TGGATATGATTGTACAAGAATCACCATTCCTGACAATGGATCTCTTGGAATCTTGTTTTCCTTATGTGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS CAA 90 bp | CATTTCTCAGCAACACATAAGGAAAACAAGATTCCAAGAGATCCATaGTCAGGAATGGTGATTCTTGTACAATCATATCCAGTAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: HFSATHKENKIPRDP*SGMVILVQSYPVAN Trigger: ATTTGCTACTGGATATGATTGTACAAGAATCACCATTCCTGACAATGGATCTCTTGGAATCTTGTTTTCCTTATGTGTTGCTGAGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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| CDS CCA 72 bp | GTTAAATCAAAGTTCACAGTAATATCAAAGAAGACTTaGCAAACGTCAATAGTATTCAGCAAGTCACAGACA | + |
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Preference number: 6 (lower is better) Translates to: VKSKFTVISKKT*QTSIVFSKSQT Trigger: TGTCTGTGACTTGCTGAATACTATTGACGTTTGCCAAGTCTTCTTTGATATTACTGTGAACTTTGATTTAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028386.12 ENSMUST00000111760.3 |
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