Pregenerated sensors for NCK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066877Ensembl transcript IDs: ENSMUST00000086421.9, ENSMUST00000114744.3, ENSMUST00000202540.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAAAGCAGGCCCAGGACACAGGCTGCCGGTCTGGACCAGCATGCTaGCGAGAGGCACCAAACACCCATGGACACAGCTCTCGGAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: AKQAQDTGCRSGPAC*REAPNTHGHSSRSV Trigger: CACACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTCCAGACCGGCAGCCTGTGTCCTGGGCCTGCTTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR CCA 90 bp | GAAAGAAAGCAAAGCAAAGCAGGCCCAGGACACAGGCTGCCGGTCTaGACCAGCATGCTGACGAGAGGCACCAAACACCCATGGACACAG | + |
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Preference number: 1 (lower is better) Translates to: ERKQSKAGPGHRLPV*TSMLTRGTKHPWTQ Trigger: CTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTCCAGACCGGCAGCCTGTGTCCTGGGCCTGCTTTGCTTTGCTTTCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR CCA 90 bp | CTGCCGGTCTGGACCAGCATGCTGACGAGAGGCACCAAACACCCATaGACACAGCTCTCGGAGTGTGTGCCAAGGTCACATATTCACTAC | + |
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Preference number: 1 (lower is better) Translates to: LPVWTSMLTRGTKHP*TQLSECVPRSHIHY Trigger: GTAGTGAATATGTGACCTTGGCACACACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTCCAGACCGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR TCA 90 bp | GTGTGCCAAGGTCACATATTCACTACATACAGCCTCGCGACCCTCTaGAGCAGCTCCAGTCTTTTAGTCAGTCTCTCTCTCTGCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: VCQGHIFTTYSLATL*SSSSLLVSLSLCTP Trigger: GGGGGTGCAGAGAGAGAGACTGACTAAAAGACTGGAGCTGCTTCAGAGGGTCGCGAGGCTGTATGTAGTGAATATGTGACCTTGGCACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR CCA 90 bp | ATTCAAACAAGCCCAAGGGCAAAAGCACGATGTGGATGGCACACCTaGGGGACATCACCAGAGTACCTTTCTTTCTGTGTTGCCACCTTC | + |
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Preference number: 1 (lower is better) Translates to: IQTSPRAKARCGWHT*GTSPEYLSFCVATF Trigger: GAAGGTGGCAACACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGGGCTTGTTTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR CCA 90 bp | AATTGTGAAATTCAAACAAGCCCAAGGGCAAAAGCACGATGTGGATaGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: NCEIQTSPRAKARCG*HTWGTSPEYLSFCV Trigger: AACACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGGGCTTGTTTGAATTTCACAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGCCCAAGGGCAAAAGCACGATGTGGATGGCACACCTGGGGGACATCACCAGCGAGGCCCACAGTaGGCAGGGCATGAGGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: KQAQGQKHDVDGTPGGHHQRGPQ*AGHEGA Trigger: GGCCCCCTCATGCCCTGCCCACTGTGGGCCTCGCTG...GTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGGGCTTGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGGTCACATATTCACTACATACAGCCTCGCGACCCTCTGAAGCAGCTCCAGGAGGTGGCCAGAAGTaGTGGGCTCTGGGAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AKVTYSLHTASRPSEAAPGGGQK*WALGGR Trigger: TCTGCCTCCCAGAGCCCAGCACTTCTGGCCACCTCC...TGGAGCTGCTTCAGAGGGTCGCGAGGCTGTATGTAGTGAATATGTGACCTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCCCGTGCTCGCTGGTGAAGATGGGGGCCTTCTTGTAGTGCTCCACAAGCTCAGCTGCACCTTGAAGTaGTTGTTTCTCCCTGACGCT | + |
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Preference number: 2 (lower is better) Translates to: LPVLAGEDGGLLVVLHKLSCTLK*LFLPDA Trigger: AGCGTCAGGGAGAAACAAGCACTTCAAGGTGCAGCT...GAGCTTGTGGAGCACTACAAGAAGGCCCCCATCTTCACCAGCGAGCACGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTCACCACCATCTCCCCAGGGTTTCCAGTATTGCTATCCGCACAGTTTTGGACAGAAGGTGGTGGCCTaGGGCATGGTTGTGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FSPPSPQGFQYCYPHSFGQKVVA*GMVVRA Trigger: GGCCCTCACAACCATGCCCCAGGCCACCACCTTCTG...TCCAAAACTGTGCGGATAGCAATACTGGAAACCCTGGGGAGATGGTGGTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR GCA 90 bp | CTCGCTGGTGAAGATGGGGGCCTTCTTGTAGTGCTCCACAAGCTCGTCCATGCTACGCTGTCCACCAGCTaGACCTTGAAGTGCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LAGEDGGLLVVLHKLVHATLSTS*TLKCLF Trigger: AAACAAGCACTTCAAGGTGCAGCTGGTGGACAGCGT...AGCATGGACGAGCTTGTGGAGCACTACAAGAAGGCCCCCATCTTCACCAGCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCGTTGACCAACAGGGCTaGAAAGAAGGACAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: KARCGWHTWGTSPEYLSFVDQQG*KEGQTG Trigger: CCCAGTCTGTCCTTCTTTTCAGCCCTGTTGGTCAAC...GAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR CCA 90 bp | GCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTAAAAGAAGGACAGACTaGGCCACAGAGGTGATCCAA | + |
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Preference number: 2 (lower is better) Translates to: ARCGWHTWGTSPEYLSFCKRRTD*ATEVIQ Trigger: TTGGATCACCTCTGTGGCCCAGTCTGTCCTTCTTTT...ACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCAGCTCTCGGAGTGTGTaGCAAGGTCACATATTCACT | + |
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Preference number: 2 (lower is better) Translates to: KARCGWHTWGTSPEYLSFSSRSV*QGHIFT Trigger: AGTGAATATGTGACCTTGGCACACACTCCGAGAGCT...GAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAATTCAAACAAGCCCAAGGGCAAAAGCACGATGTGGATGGCACACCTGGTGGAAAGGAAAGAAGTaGGTAGCTTTGCTCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: CEIQTSPRAKARCGWHTWWKGKK*VALLPL Trigger: CAGAGGGAGCAAAGCTACTCACTTCTTTCCTTTCCA...CCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGGGCTTGTTTGAATTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR CCA 90 bp | TATGTGTGTGTAAGGATTCAAACAGGCTGTTTCCAGCTGGAAAGGAAAGAAGTGTCCAAGCCACATGGGTaGAGGTGGCCAGAAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: YVCVRIQTGCFQLERKEVSKPHG*RWPEVL Trigger: CAGCACTTCTGGCCACCTCCACCCATGTGGCTTGGA...CACTTCTTTCCTTTCCAGCTGGAAACAGCCTGTTTGAATCCTTACACACACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTATGCAAGTTTAGGGGATCCCAAGACCCCTTCTTCAATTGTAGGAATGTGCCCTTTCTTTCTGTGTTaGCACCTTCCTCTTTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GYASLGDPKTPSSIVGMCPFFLC*HLPLLQ Trigger: CTGCAAAAGAGGAAGGTGGCAACACAGAAAGAAAGG...GCACATTCCTACAATTGAAGAAGGGGTCTTGGGATCCCCTAAACTTGCATACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATCAGCTGTTTTCCTTAATCATGTTATTAGTGTCAACAACCAGCTACAGCTCATCACCAGAAGGTaGTGGCCTGGGGCATGGTTG | + |
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Preference number: 2 (lower is better) Translates to: KRSAVFLNHVISVNNQLQLITRR*WPGAWL Trigger: CAACCATGCCCCAGGCCACCACCTTCTGGTGATGAG...CTGTAGCTGGTTGTTGACACTAATAACATGATTAAGGAAAACAGCTGATCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCTCACCACCATCTCCCCAGGGTTTCCAGTATTGCTATCCGCACAGTTTTGACTCCTGCAGTGCCTaGAGCCAAAATAAAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: VFSPPSPQGFQYCYPHSFDSCSA*SQNKIK Trigger: TTTTATTTTATTTTGGCTCCAGGCACTGCAGGAGTC...AAAACTGTGCGGATAGCAATACTGGAAACCCTGGGGAGATGGTGGTGAGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR CAA 90 bp | GACATCACCAGAGTACCTTTCTTTCTGTGTTGCCACCTTCCTCTTTaGCAGACCAACTCTTACCAAAACCCTCTTTTATTGCAAGTACAG | + |
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Preference number: 2 (lower is better) Translates to: DITRVPFFLCCHLPL*QTNSYQNPLLLQVQ Trigger: CTGTACTTGCAATAAAAGAGGGTTTTGGTAAGAGTTGGTCTGCAAAAGAGGAAGGTGGCAACACAGAAAGAAAGGTACTCTGGTGATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR TCA 72 bp | CTGGGGCATGGTTGTGAGGGCCTAGGTAGCCGTGGTTaGCCAACAGGGCTGAAAAGAAGGACAGACTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: LGHGCEGLGSRG*PTGLKRRTDWA Trigger: GGCCCAGTCTGTCCTTCTTTTCAGCCCTGTTGGTCAACCACGGCTACCTAGGCCCTCACAACCATGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR CAA 90 bp | CAAGTACAGCCTCAAAGGCACTGGGCAGTTTTCTCACCACCATCTCCCCAGGGTGCTATCCGCACAGTTTaGGACTCCTGCAGTGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: QVQPQRHWAVFSPPSPQGAIRTV*DSCSAW Trigger: CCAGGCACTGCAGGAGTCCAAAACTGTGCGGATAGC...ACCCTGGGGAGATGGTGGTGAGAAAACTGCCCAGTGCCTTTGAGGCTGTACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR-3UTR CAA 90 bp | AGATGGGGGCCTTCTTGTAGTGCTCCACAAGCTCGTCCATGCTGTGGAACCGCCTGCACCTTGAAGTGCTaGTTTCTCCCTGACGCTTTG | + |
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Preference number: 3 (lower is better) Translates to: RWGPSCSAPQARPCCGTACTLKC*FLPDAL Trigger: CAAAGCGTCAGGGAGAAACAAGCACTTCAAGGTGCA...GGCGGTTCCACAGCATGGACGAGCTTGTGGAGCACTACAAGAAGGCCCCCATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
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| 3UTR GCA 72 bp | GCACCAAACACCCATGGACACAGCTCTCGGAGTGTGTaGCAAGGTCACATATTCACTACATACAGCCTCGCG | + |
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Preference number: 3 (lower is better) Translates to: APNTHGHSSRSV*QGHIFTTYSLA Trigger: CGCGAGGCTGTATGTAGTGAATATGTGACCTTGGCACACACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR CCA 72 bp | ATTCAAACAAGCCCAAGGGCAAAAGCACGATGTGGATaGCACACCTGGGGGACATCACCAGAGTACCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: IQTSPRAKARCG*HTWGTSPEYLS Trigger: AGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGGGCTTGTTTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| 3UTR TCA 72 bp | GGTCACATATTCACTACATACAGCCTCGCGACCCTCTaGAGCAGCTCCAGTCTTTTAGTCAGTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: GHIFTTYSLATL*SSSSLLVSLSL Trigger: GAGAGAGAGACTGACTAAAAGACTGGAGCTGCTTCAGAGGGTCGCGAGGCTGTATGTAGTGAATATGTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR TCA 90 bp | CCATGCTGTGGAACCGCCGCTGCCCAATGCAGTAGACGCTGTCCACCAGCTGCAACCGCTCGTTCTTCCTaGTGTCGAGCTCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PCCGTAAAQCSRRCPPAATARSS*CRAPGP Trigger: AGGACCAGGAGCTCGACATCAGGAAGAACGAGCGGT...TGCAGCTGGTGGACAGCGTCTACTGCATTGGGCAGCGGCGGTTCCACAGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
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| CDS-3UTR TCA 90 bp | GACCAGCATGCTGACGAGAGGCACCAAACACCCATGGACACAGCTCTCGGAGTGAAAGCGCCCGCTGGCTaGAGGCCCGGTGTAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: DQHADERHQTPMDTALGVKAPAG*RPGVAD Trigger: ATCAGCTACACCGGGCCTTCAGCCAGCGGGCGCTTT...CACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR GCA 90 bp | GACCAGCATGCTGACGAGAGGCACCAAACACCCATGGACACAGCTCTCGGAGTGGGGAACCAGCCGATCTaGCCGTTGAAGCTGCCACGC | + |
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Preference number: 4 (lower is better) Translates to: DQHADERHQTPMDTALGVGNQPI*PLKLPR Trigger: GCGTGGCAGCTTCAACGGGCAGATCGGCTGGTTCCC...CACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR CCA 90 bp | GCTGACGAGAGGCACCAAACACCCATGGACACAGCTCTCGGAGTGTGTGCCAAGGTAGGCTCAGGAAGCTaGGGGCCTCAGCCGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: ADERHQTPMDTALGVCAKVGSGS*GPQPQL Trigger: AAGCTGCGGCTGAGGCCCCCAGCTTCCTGAGCCTAC...CTTGGCACACACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR TCA 90 bp | GCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTCGACGCCCCGCTCATTaGGCGCACACTCGGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ARCGWHTWGTSPEYLSFCRRPAH*AHTRPG Trigger: ACCAGGCCGAGTGTGCGCTCAATGAGCGGGGCGTCG...ACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR CCA 90 bp | CCGCCGCTGCCCAATGCAGTAGACGCTGTCCACCAGCTGCACCTTGAAGTGCTTCCCGCCACCACGTCTTaGAGTCATCTAGCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PPLPNAVDAVHQLHLEVLPATTS*SHLAAT Trigger: TGTGGCTGCTAGATGACTCCAAGACGTGGTGGCGGG...AAGCACTTCAAGGTGCAGCTGGTGGACAGCGTCTACTGCATTGGGCAGCGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
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| CDS-3UTR GCA 90 bp | TCTCGGAGTGTGTGCCAAGGTCACATATTCACTACATACAGCCTCGCGACCCTCAGCGTCTGCACCACGTaGAGCACCCGTGCACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRSVCQGHIFTTYSLATLSVCTT*STRAPC Trigger: GCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCT...GAGGGTCGCGAGGCTGTATGTAGTGAATATGTGACCTTGGCACACACTCCGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR CCA 90 bp | TCTCGGAGTGTGTGCCAAGGTCACATATTCACTACATACAGCCTCGCGACCCTCCAGCAAAGCGCCCGCTaGCTGAAGGCCCGGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SRSVCQGHIFTTYSLATLQQSAR*LKARCS Trigger: GCTACACCGGGCCTTCAGCCAGCGGGCGCTTTGCTG...GAGGGTCGCGAGGCTGTATGTAGTGAATATGTGACCTTGGCACACACTCCGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR TCA 90 bp | CTCGCTGGTGAAGATGGGGGCCTTCTTGTAGTGCTCCACAAGCTCGTCCATGCTGGGCTAGTGTGTCCTTaGGGTTCTTCACCAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LAGEDGGLLVVLHKLVHAGLVCP*GSSPGS Trigger: GCTCCCTGGTGAAGAACCTCAAGGACACACTAGCCC...AGCATGGACGAGCTTGTGGAGCACTACAAGAAGGCCCCCATCTTCACCAGCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
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| CDS-3UTR GCA 90 bp | GCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTCCACAAGCTCGTCCATaGTGTGGAACCGCCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ARCGWHTWGTSPEYLSFCPQARP*CGTAAA Trigger: GGCAGCGGCGGTTCCACAGCATGGACGAGCTTGTGG...ACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR CCA 90 bp | GTGGAACCGCCGCTGCCCAATGCAGTAGACGCTGTCCACCAGCTGCACCTTGAATACGCTCCACATAGTTaGAAGGCACGTAGCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VEPPLPNAVDAVHQLHLEYAPHS*KARSLS Trigger: GGACAGGCTACGTGCCTTCCAACTATGTGGAGCGTA...TTCAAGGTGCAGCTGGTGGACAGCGTCTACTGCATTGGGCAGCGGCGGTTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
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| CDS-3UTR CCA 90 bp | GGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTGTTGCCACCTTCCAGCTCGTCCATGCTGTaGAACCGCCGCTGCCCAATG | + |
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Preference number: 4 (lower is better) Translates to: GTPGGHHQSTFLSVLPPSSSSML*NRRCPM Trigger: CATTGGGCAGCGGCGGTTCCACAGCATGGACGAGCT...GGAAGGTGGCAACACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR TCA 90 bp | CAAGTACAGCCTCAAAGGCACTGGGCAGTTTTCTCACCACCATCTCCCCAGGGTACCGCTCGTTCTTCCTaGTGTCGAGCTCCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QVQPQRHWAVFSPPSPQGTARSS*CRAPGP Trigger: AGGACCAGGAGCTCGACATCAGGAAGAACGAGCGGT...ACCCTGGGGAGATGGTGGTGAGAAAACTGCCCAGTGCCTTTGAGGCTGTACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR GCA 90 bp | GCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTAGCACCCGTGCACCCTaGCCATTGCTCAGTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ARCGWHTWGTSPEYLSFCSTRAP*PLLSAV Trigger: CACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCT...ACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR GCA 90 bp | GCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTAAGGGGTACAGCGTCTaGACCACGTGCAGCACCCGT | + |
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Preference number: 4 (lower is better) Translates to: ARCGWHTWGTSPEYLSFCKGYSV*TTCSTR Trigger: ACGGGTGCTGCACGTGGTGCAGACGCTGTACCCCTT...ACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR CCA 90 bp | AAACAAGCCCAAGGGCAAAAGCACGATGTGGATGGCACACCTGGGGGACATCACACCGCTGCCATTGGCTaGGTACTCCGCATCAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KQAQGQKHDVDGTPGGHHTAAIG*VLRISA Trigger: AGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGT...GTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGGGCTTGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR CCA 90 bp | GCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTCAGCACCGCTGCCATTaGCTGGGTACTCCGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: ARCGWHTWGTSPEYLSFCQHRCH*LGTPHQ Trigger: CTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCTG...ACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR CCA 90 bp | GACCAGCATGCTGACGAGAGGCACCAAACACCCATGGACACAGCTCTCGGAGTGCCTCCAAAACGTAGTTaGAGGGGAACCAGCCGATCT | + |
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Preference number: 4 (lower is better) Translates to: DQHADERHQTPMDTALGVPPKRS*RGTSRS Trigger: AGATCGGCTGGTTCCCCTCCAACTACGTTTTGGAGG...CACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR TCA 90 bp | GCAAGTTTAGGGGATCCCAAGACCCCTTCTTCAATTGTAGGAATGTGCCATCTCAGCCGATCTGCCCGTTaGAGCTGCCACGCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: ASLGDPKTPSSIVGMCHLSRSAR*SCHATS Trigger: GCTGGTGGCGTGGCAGCTTCAACGGGCAGATCGGCT...GAGATGGCACATTCCTACAATTGAAGAAGGGGTCTTGGGATCCCCTAAACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR CCA 90 bp | AAAGCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCAGCATCCCGAGCGCTTaGCTTCCTGCGCGTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: KARCGWHTWGTSPEYLSFSIPSA*LPARLS Trigger: GGAAAGACGCGCAGGAAGCCAAGCGCTCGGGATGCT...GAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS-3UTR TCA 90 bp | GGGTATGCAAGTTTAGGGGATCCCAAGACCCCTTCTTCAATTGTAGGAATGTGCCCCCGTGCTCGCTGGTaGAGATGGGGGCCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GYASLGDPKTPSSIVGMCPRARW*RWGPSC Trigger: ACAAGAAGGCCCCCATCTTCACCAGCGAGCACGGGG...GCACATTCCTACAATTGAAGAAGGGGTCTTGGGATCCCCTAAACTTGCATACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CCA 90 bp | GCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTGTCAACCACGTAGTTTTTaGGGACCAGGCCCACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARCGWHTWGTSPEYLSFCQPRSF*GPGPLG Trigger: GCCAAGTGGGCCTGGTCCCCAAAAACTACGTGGTTG...ACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTACAGCCTCAAAGGCACTGGGCAGTTTTCTCACCACCATCTCCCCAGGGTGAGCAGGCCCATCACTaGGAACAACCACGTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVQPQRHWAVFSPPSPQGEQAHH*EQPRSF Trigger: AAAACTACGTGGTTGTTCTCAGTGATGGGCCTGCTC...ACCCTGGGGAGATGGTGGTGAGAAAACTGCCCAGTGCCTTTGAGGCTGTACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR GCA 90 bp | TGTGAAATTCAAACAAGCCCAAGGGCAAAAGCACGATGTGGATGGCACACCTGGGGTGCCGTGTCACGTTaGCATAGTACCACTCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CEIQTSPRAKARCGWHTWGAVSR*HSTTPD Trigger: GTCGGGAGTGGTACTATGGCAACGTGACACGGCACC...CCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGGGCTTGTTTGAATTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTACAGCCTCAAAGGCACTGGGCAGTTTTCTCACCACCATCTCCCCAGGGTACGCTGTCCACCAGCTaGACCTTGAAGTGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVQPQRHWAVFSPPSPQGTLSTS*TLKCLF Trigger: AAACAAGCACTTCAAGGTGCAGCTGGTGGACAGCGT...ACCCTGGGGAGATGGTGGTGAGAAAACTGCCCAGTGCCTTTGAGGCTGTACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR GCA 90 bp | TTCTCACCACCATCTCCCCAGGGTTTCCAGTATTGCTATCCGCACAGTTTTGGAGGTACTCCGCATCAGTaGTTGGCGTTGGGGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSPPSPQGFQYCYPHSFGGTPHQ*LALGKH Trigger: ATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACC...TCCAAAACTGTGCGGATAGCAATACTGGAAACCCTGGGGAGATGGTGGTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGTCACATATTCACTACATACAGCCTCGCGACCCTCTGAAGCAGCTCCAAGCTGCACCTTGAAGTaGTTGTTTCTCCCTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKVTYSLHTASRPSEAAPSCTLK*LFLPDA Trigger: AGCGTCAGGGAGAAACAAGCACTTCAAGGTGCAGCT...TGGAGCTGCTTCAGAGGGTCGCGAGGCTGTATGTAGTGAATATGTGACCTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR GCA 90 bp | AACCGGGTATGCAAGTTTAGGGGATCCCAAGACCCCTTCTTCAATTGTAGGAATACCGCCGCTGCCCAATaGAGTAGACGCTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NRVCKFRGSQDPFFNCRNTAAAQ*SRRCPP Trigger: TGGTGGACAGCGTCTACTGCATTGGGCAGCGGCGGT...ATTCCTACAATTGAAGAAGGGGTCTTGGGATCCCCTAAACTTGCATACCCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCACGATGTGGATGGCACACCTGGGGGACATCACCAGAGTACCTTTCTTTCTACGCTCCACATAGTTaGAAGGCACGTAGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KARCGWHTWGTSPEYLSFYAPHS*KARSLS Trigger: GGACAGGCTACGTGCCTTCCAACTATGTGGAGCGTA...GAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTCTCACCACCATCTCCCCAGGGTTTCCAGTATTGCTATCCGCACAGTTTTGGGACCAGGCCCACTTaGCCTCGGGCATTTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFSPPSPQGFQYCYPHSFGTRPT*PRAFLH Trigger: ATGCAAAAATGCCCGAGGCCAAGTGGGCCTGGTCCC...AAAACTGTGCGGATAGCAATACTGGAAACCCTGGGGAGATGGTGGTGAGAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCTGGAAAGGAAAGAAGTGAGTAGCTTTGCTCCCTCTGACCCTCATCACCAAAGGCTGGGATGTTaGGGTCATAGATGCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQLERKEVSSFAPSDPHHQRLGC*GHRCGQ Trigger: CTGACCGCATCTATGACCTCAACATCCCAGCCTTTG...GTGATGAGGGTCAGAGGGAGCAAAGCTACTCACTTCTTTCCTTTCCAGCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAGCTGGAAAGGAAAGAAGTGAGTAGCTTTGCTCCCTCTGACCCTCATCACGGCCTCGGGCATTTTTaGATTTCCACCATTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQLERKEVSSFAPSDPHHGLGHF*ISTIQG Trigger: ACCCTGAATGGTGGAAATGCAAAAATGCCCGAGGCC...GTGATGAGGGTCAGAGGGAGCAAAGCTACTCACTTCTTTCCTTTCCAGCTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR TCA 90 bp | TATGTGTGTGTAAGGATTCAAACAGGCTGTTTCCAGCTGGAAAGGAAAGAAGTGGGCCTAGTGTGTCCTTaGGGTTCTTCACCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVCVRIQTGCFQLERKEVGLVCP*GSSPGS Trigger: GCTCCCTGGTGAAGAACCTCAAGGACACACTAGGCC...CACTTCTTTCCTTTCCAGCTGGAAACAGCCTGTTTGAATCCTTACACACACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR TCA 90 bp | TTTTATTGCAAGTACAGCCTCAAAGGCACTGGGCAGTTTTCTCACCACCATCTCTTCTCCCTGACGCTTTaGGAGACACGGAGAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FYCKYSLKGTGQFSHHHLFSLTL*ETRRSH Trigger: GTGACTTCTCCGTGTCTCTCAAAGCGTCAGGGAGAA...GAGATGGTGGTGAGAAAACTGCCCAGTGCCTTTGAGGCTGTACTTGCAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CCA 90 bp | TTTTATTGCAAGTACAGCCTCAAAGGCACTGGGCAGTTTTCTCACCACCATCTCTCTCAATCACCTCCATaGTCTCCCCCTTCTCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FYCKYSLKGTGQFSHHHLSQSPP*SPPSRN Trigger: GTTTCGAGAAGGGGGAGACCATGGAGGTGATTGAGA...GAGATGGTGGTGAGAAAACTGCCCAGTGCCTTTGAGGCTGTACTTGCAATAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGATCAGCTGTTTTCCTTAATCATGTTATTAGTGTCAACAACCAGCTACAGCCCGCCACCACGTCTTaGAGTCATCTAGCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KRSAVFLNHVISVNNQLQPATTS*SHLAAT Trigger: TGTGGCTGCTAGATGACTCCAAGACGTGGTGGCGGG...CTGTAGCTGGTTGTTGACACTAATAACATGATTAAGGAAAACAGCTGATCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 90 bp | GCACCACGTGCAGCACCCGTGCACCCTGCCCATTGCTCAGTGCAGTaGCCCGACGTAGGCTCAGGAAGCTGGGGGCCTCAGCCGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: APRAAPVHPAHCSVQ*PDVGSGSWGPQPQL Trigger: AAGCTGCGGCTGAGGCCCCCAGCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 90 bp | GGTACAGCGTCTGCACCACGTGCAGCACCCGTGCACCCTGCCCATTaGTCAGTGCAGTGCCCCGACGTAGGCTCAGGAAGCTGGGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTASAPRAAPVHPAH*SVQCPDVGSGSWGP Trigger: AGGCCCCCAGCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCTGTACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 90 bp | AGATGCGGTCAGCACCGCTGCCATTGGCTGGGTACTCCGCATCAGTaGTTGGCGTTGGGGAAGCATCCCGAGCGCTTGGCTTCCTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RCGQHRCHWLGTPHQ*LALGKHPERLASCA Trigger: CGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCTGACCGCATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
||
| CDS GCA 90 bp | CTGAAGGGGTACAGCGTCTGCACCACGTGCAGCACCCGTGCACCCTaGCCATTGCTCAGTGCAGTGCCCCGACGTAGGCTCAGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKGYSVCTTCSTRAP*PLLSAVPRRRLRKL Trigger: CAGCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCTGTACCCCTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 90 bp | TCCTCCTCAGTGACCGAGCTGAAGGGGTACAGCGTCTGCACCACGTaGAGCACCCGTGCACCCTGCCCATTGCTCAGTGCAGTGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSSVTELKGYSVCTT*STRAPCPLLSAVPR Trigger: TCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCTGTACCCCTTCAGCTCGGTCACTGAGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS CCA 90 bp | GCGGTCAGCACCGCTGCCATTGGCTGGGTACTCCGCATCAGTGCTTaGCGTTGGGGAAGCATCCCGAGCGCTTGGCTTCCTGCGCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVSTAAIGWVLRISA*RWGSIPSAWLPARL Trigger: AAGACGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCTGACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
||
| CDS CCA 90 bp | AGCACCGCTGCCATTGGCTGGGTACTCCGCATCAGTGCTTGGCGTTaGGGAAGCATCCCGAGCGCTTGGCTTCCTGCGCGTCTTTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: STAAIGWVLRISAWR*GSIPSAWLPARLSE Trigger: CTCGGAAAGACGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
||
| CDS CCA 90 bp | TGGGATGTTGAGGTCATAGATGCGGTCAGCACCGCTGCCATTGGCTaGGTACTCCGCATCAGTGCTTGGCGTTGGGGAAGCATCCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WDVEVIDAVSTAAIG*VLRISAWRWGSIPS Trigger: GCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCTGACCGCATCTATGACCTCAACATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTCCCCGTGCTCGCTGGTGAAGATGGGGGCCTTCTTGTAGTGCTCCACAAGACCCGCCACCACGTCTaGGAGTCATCTAGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPVLAGEDGGLLVVLHKTRHHV*ESSSSH Trigger: GTGGCTGCTAGATGACTCCAAGACGTGGTGGCGGGT...CTTGTGGAGCACTACAAGAAGGCCCCCATCTTCACCAGCGAGCACGGGGAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
||
| CDS-3UTR CAA 90 bp | GACCAGCATGCTGACGAGAGGCACCAAACACCCATGGACACAGCTCTCGGAGTGAAGCATCCCGAGCGCTaGGCTTCCTGCGCGTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DQHADERHQTPMDTALGVKHPER*ASCASF Trigger: GAAAGACGCGCAGGAAGCCAAGCGCTCGGGATGCTT...CACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CAA 90 bp | AACAGGGCTGAAAAGAAGGACAGACTGGGCCACAGAGGTGATCCAAGCCACATGCGTGCACCCTGCCCATaGCTCAGTGCAGTGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: NRAEKKDRLGHRGDPSHMRAPCP*LSAVPR Trigger: TCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACG...CATGTGGCTTGGATCACCTCTGTGGCCCAGTCTGTCCTTCTTTTCAGCCCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CAA 90 bp | CCGCCGCTGCCCAATGCAGTAGACGCTGTCCACCAGCTGCACCTTGAAGTGCTTTGGGCTAGTGTGTCCTaGAGGTTCTTCACCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPLPNAVDAVHQLHLEVLWASVS*RFFTRE Trigger: CTCCCTGGTGAAGAACCTCAAGGACACACTAGCCCA...AAGCACTTCAAGGTGCAGCTGGTGGACAGCGTCTACTGCATTGGGCAGCGGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114744.3 |
||
| CDS TCA 90 bp | ACCACGTCTTGGAGTCATCTAGCAGCCACAACCGCTCGTTCTTCCTaGTGTCGAGCTCCTGGTCCTGCTGGGCAGTGTAGTCCCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TTSWSHLAATTARSS*CRAPGPAGQCSPTW Trigger: CCAAGTGGGACTACACTGCCCAGCAGGACCAGGAGCTCGACATCAGGAAGAACGAGCGGTTGTGGCTGCTAGATGACTCCAAGACGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086421.9 ENSMUST00000114744.3 ENSMUST00000202540.2 |
||
| CDS-3UTR CAA 90 bp | GCTGACGAGAGGCACCAAACACCCATGGACACAGCTCTCGGAGTGTGTGCCAAGAGGCCTAGTGTGTCCTaGAGGTTCTTCACCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ADERHQTPMDTALGVCAKRPSVS*RFFTRE Trigger: CTCCCTGGTGAAGAACCTCAAGGACACACTAGGCCT...CTTGGCACACACTCCGAGAGCTGTGTCCATGGGTGTTTGGTGCCTCTCGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS TCA 90 bp | GTAGACGCTGTCCACCAGCTGCACCTTGAAGTGCTTGTTTCTCCCTaGCGCTTTGAGAGACACGGAGAAGTCACTGGGCGAGGACTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VDAVHQLHLEVLVSP*RFERHGEVTGRGLA Trigger: AGCGAGTCCTCGCCCAGTGACTTCTCCGTGTCTCTCAAAGCGTCAGGGAGAAACAAGCACTTCAAGGTGCAGCTGGTGGACAGCGTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTCACCACCATCTCCCCAGGGTTTCCAGTATTGCTATCCGCACAGTTTTTCGACGCCCCGCTCATaGAGCGCACACTCGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFSPPSPQGFQYCYPHSFSTPRS*SAHSAW Trigger: CCAGGCCGAGTGTGCGCTCAATGAGCGGGGCGTCGA...AAAACTGTGCGGATAGCAATACTGGAAACCCTGGGGAGATGGTGGTGAGAAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CAA 90 bp | TTCCAGCTGGAAAGGAAAGAAGTGAGTAGCTTTGCTCCCTCTGACCCTCATCACGGGGACCAGGCCCACTaGGCCTCGGGCATTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FQLERKEVSSFAPSDPHHGDQAH*ASGIFA Trigger: TGCAAAAATGCCCGAGGCCAAGTGGGCCTGGTCCCC...GTGATGAGGGTCAGAGGGAGCAAAGCTACTCACTTCTTTCCTTTCCAGCTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 90 bp | TGTGACACGGGAGCCCTTCACCAGGGACAGCTCATCCTCTCGTTCTaGTACGTAGGCGAACTTGACAAAGGCTGGGATGTTGAGGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: CDTGALHQGQLILSF*YVGELDKGWDVEVI Trigger: TATGACCTCAACATCCCAGCCTTTGTCAAGTTCGCCTACGTAGCAGAACGAGAGGATGAGCTGTCCCTGGTGAAGGGCTCCCGTGTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGTTTAGGGGATCCCAAGACCCCTTCTTCAATTGTAGGAATGTGCCATCTCACCCGCCACCACGTCTaGGAGTCATCTAGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASLGDPKTPSSIVGMCHLTRHHV*ESSSSH Trigger: GTGGCTGCTAGATGACTCCAAGACGTGGTGGCGGGT...GAGATGGCACATTCCTACAATTGAAGAAGGGGTCTTGGGATCCCCTAAACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CAA 90 bp | TATGTGTGTGTAAGGATTCAAACAGGCTGTTTCCAGCTGGAAAGGAAAGAAGTGCAGCCGATCTGCCCGTaGAAGCTGCCACGCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: YVCVRIQTGCFQLERKEVQPICP*KLPRHQ Trigger: CTGGTGGCGTGGCAGCTTCAACGGGCAGATCGGCTG...CACTTCTTTCCTTTCCAGCTGGAAACAGCCTGTTTGAATCCTTACACACACATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTCTCACCACCATCTCCCCAGGGTTTCCAGTATTGCTATCCGCACAGTTTTTTTCTCCCTGACGCTTaGAGAGACACGGAGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFSPPSPQGFQYCYPHSFFLPDA*RDTEKS Trigger: TGACTTCTCCGTGTCTCTCAAAGCGTCAGGGAGAAA...AAAACTGTGCGGATAGCAATACTGGAAACCCTGGGGAGATGGTGGTGAGAAAAC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CAA 90 bp | TATGTGTGTGTAAGGATTCAAACAGGCTGTTTCCAGCTGGAAAGGAAAGAAGTGTGCACCTTGAAGTGCTaGTTTCTCCCTGACGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YVCVRIQTGCFQLERKEVCTLKC*FLPDAL Trigger: CAAAGCGTCAGGGAGAAACAAGCACTTCAAGGTGCA...CACTTCTTTCCTTTCCAGCTGGAAACAGCCTGTTTGAATCCTTACACACACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGATCAGCTGTTTTCCTTAATCATGTTATTAGTGTCAACAACCAGCTACAGTGGCCTCGGGCATTTTaGCATTTCCACCATTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KRSAVFLNHVISVNNQLQWPRAF*HFHHSG Trigger: CCCTGAATGGTGGAAATGCAAAAATGCCCGAGGCCA...CTGTAGCTGGTTGTTGACACTAATAACATGATTAAGGAAAACAGCTGATCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS CAA 90 bp | GGGTACAGCGTCTGCACCACGTGCAGCACCCGTGCACCCTGCCCATaGCTCAGTGCAGTGCCCCGACGTAGGCTCAGGAAGCTGGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GYSVCTTCSTRAPCP*LSAVPRRRLRKLGA Trigger: GGCCCCCAGCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCTGTACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 72 bp | GCAGCACCCGTGCACCCTGCCCATTGCTCAGTGCAGTaGCCCGACGTAGGCTCAGGAAGCTGGGGGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AAPVHPAHCSVQ*PDVGSGSWGPQ Trigger: CTGAGGCCCCCAGCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 72 bp | GAAGGGGTACAGCGTCTGCACCACGTGCAGCACCCGTaGACCCTGCCCATTGCTCAGTGCAGTGCCCCGACG | + |
|
Preference number: 6 (lower is better) Translates to: EGVQRLHHVQHP*TLPIAQCSAPT Trigger: CGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCTGTACCCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS CCA 72 bp | TGCTCAGTGCAGTGCCCCGACGTAGGCTCAGGAAGCTaGGGGCCTCAGCCGCAGCTTCGTCCGCTTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSVQCPDVGSGS*GPQPQLRPLPP Trigger: TGGAGGAAGCGGACGAAGCTGCGGCTGAGGCCCCCAGCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 72 bp | TCTGCACCACGTGCAGCACCCGTGCACCCTGCCCATTaGTCAGTGCAGTGCCCCGACGTAGGCTCAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SAPRAAPVHPAH*SVQCPDVGSGS Trigger: GCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS GCA 72 bp | TACAGCGTCTGCACCACGTGCAGCACCCGTGCACCCTaGCCATTGCTCAGTGCAGTGCCCCGACGTAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: YSVCTTCSTRAP*PLLSAVPRRRL Trigger: GAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCTGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
||
| CDS CAA 72 bp | GTCTGCACCACGTGCAGCACCCGTGCACCCTGCCCATaGCTCAGTGCAGTGCCCCGACGTAGGCTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VCTTCSTRAPCP*LSAVPRRRLRK Trigger: CTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS CAA 90 bp | TGCGGTCAGCACCGCTGCCATTGGCTGGGTACTCCGCATCAGTGCTaGGCGTTGGGGAAGCATCCCGAGCGCTTGGCTTCCTGCGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: CGQHRCHWLGTPHQC*ALGKHPERLASCAS Trigger: AGACGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCTGACCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS GCA 72 bp | CAGCACCGCTGCCATTGGCTGGGTACTCCGCATCAGTaGTTGGCGTTGGGGAAGCATCCCGAGCGCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QHRCHWLGTPHQ*LALGKHPERLA Trigger: AGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS GCA 72 bp | TCCTCCTCAGTGACCGAGCTGAAGGGGTACAGCGTCTaGACCACGTGCAGCACCCGTGCACCCTGCCCATTG | + |
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Preference number: 6 (lower is better) Translates to: SSSVTELKGYSV*TTCSTRAPCPL Trigger: CAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCTGTACCCCTTCAGCTCGGTCACTGAGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS CCA 72 bp | GCCATTGGCTGGGTACTCCGCATCAGTGCTTGGCGTTaGGGAAGCATCCCGAGCGCTTGGCTTCCTGCGCGT | + |
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Preference number: 6 (lower is better) Translates to: AIGWVLRISAWR*GSIPSAWLPAR Trigger: ACGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS CAA 72 bp | TGCCATTGGCTGGGTACTCCGCATCAGTGCTTGGCGTaGGGGAAGCATCCCGAGCGCTTGGCTTCCTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: CHWLGTPHQCLA*GKHPERLASCA Trigger: CGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS CAA 72 bp | CACCGCTGCCATTGGCTGGGTACTCCGCATCAGTGCTaGGCGTTGGGGAAGCATCCCGAGCGCTTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HRCHWLGTPHQC*ALGKHPERLAS Trigger: GGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS CAA 72 bp | TCCCTAATGAGGAAGTCGCCCTCGACGCCCCGCTCATaGAGCGCACACTCGGCCTGGTGCCGTGTCACGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLMRKSPSTPRS*SAHSAWCRVTL Trigger: CAACGTGACACGGCACCAGGCCGAGTGTGCGCTCAATGAGCGGGGCGTCGAGGGCGACTTCCTCATTAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS CAA 90 bp | CAGCACCGCTGCCATTGGCTGGGTACTCCGCATCAGTGCTTGGCGTaGGGGAAGCATCCCGAGCGCTTGGCTTCCTGCGCGTCTTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: QHRCHWLGTPHQCLA*GKHPERLASCASFR Trigger: TCGGAAAGACGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS CCA 72 bp | ACCGCTGCCATTGGCTGGGTACTCCGCATCAGTGCTTaGCGTTGGGGAAGCATCCCGAGCGCTTGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TAAIGWVLRISA*RWGSIPSAWLP Trigger: AGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS CAA 72 bp | CATCAGTGCTTGGCGTTGGGGAAGCATCCCGAGCGCTaGGCTTCCTGCGCGTCTTTCCGAGGCCTAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: HQCLALGKHPER*ASCASFRGLVC Trigger: ACACACTAGGCCTCGGAAAGACGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS CAA 72 bp | GGCTTCCTGCGCGTCTTTCCGAGGCCTAGTGTGTCCTaGAGGTTCTTCACCAGGGAGCCCTTCTTCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GFLRVFPRPSVS*RFFTREPFFRL Trigger: CAGCCTGAAGAAGGGCTCCCTGGTGAAGAACCTCAAGGACACACTAGGCCTCGGAAAGACGCGCAGGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS TCA 72 bp | GCTTCCTGCGCGTCTTTCCGAGGCCTAGTGTGTCCTTaGGGTTCTTCACCAGGGAGCCCTTCTTCAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ASCASFRGLVCP*GSSPGSPSSGC Trigger: ACAGCCTGAAGAAGGGCTCCCTGGTGAAGAACCTCAAGGACACACTAGGCCTCGGAAAGACGCGCAGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS CCA 72 bp | TCCTGTTGGCAGCATTCCTCACCCGCCACCACGTCTTaGAGTCATCTAGCAGCCACAACCGCTCGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SCWQHSSPATTS*SHLAATTARSS Trigger: GGAAGAACGAGCGGTTGTGGCTGCTAGATGACTCCAAGACGTGGTGGCGGGTGAGGAATGCTGCCAACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086421.9 ENSMUST00000114744.3 ENSMUST00000202540.2 |
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| CDS CAA 72 bp | GTCCTGTTGGCAGCATTCCTCACCCGCCACCACGTCTaGGAGTCATCTAGCAGCCACAACCGCTCGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VLLAAFLTRHHV*ESSSSHNRSFF Trigger: GAAGAACGAGCGGTTGTGGCTGCTAGATGACTCCAAGACGTGGTGGCGGGTGAGGAATGCTGCCAACAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086421.9 ENSMUST00000114744.3 ENSMUST00000202540.2 |
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| CDS CAA 90 bp | CTGTCCACCAGCTGCACCTTGAAGTGCTTGTTTCTCCCTGACGCTTaGAGAGACACGGAGAAGTCACTGGGCGAGGACTCGCTGTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: LSTSCTLKCLFLPDA*RDTEKSLGEDSLSL Trigger: TAGGGACAGCGAGTCCTCGCCCAGTGACTTCTCCGTGTCTCTCAAAGCGTCAGGGAGAAACAAGCACTTCAAGGTGCAGCTGGTGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS TCA 72 bp | TGGAGTCATCTAGCAGCCACAACCGCTCGTTCTTCCTaGTGTCGAGCTCCTGGTCCTGCTGGGCAGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: WSHLAATTARSS*CRAPGPAGQCS Trigger: ACTACACTGCCCAGCAGGACCAGGAGCTCGACATCAGGAAGAACGAGCGGTTGTGGCTGCTAGATGACTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086421.9 ENSMUST00000114744.3 ENSMUST00000202540.2 |
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| CDS TCA 72 bp | GTCCACCAGCTGCACCTTGAAGTGCTTGTTTCTCCCTaGCGCTTTGAGAGACACGGAGAAGTCACTGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: VHQLHLEVLVSP*RFERHGEVTGR Trigger: TCGCCCAGTGACTTCTCCGTGTCTCTCAAAGCGTCAGGGAGAAACAAGCACTTCAAGGTGCAGCTGGTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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| CDS GCA 72 bp | GGAGCCCTTCACCAGGGACAGCTCATCCTCTCGTTCTaGTACGTAGGCGAACTTGACAAAGGCTGGGATGTT | + |
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Preference number: 6 (lower is better) Translates to: GALHQGQLILSF*YVGELDKGWDV Trigger: AACATCCCAGCCTTTGTCAAGTTCGCCTACGTAGCAGAACGAGAGGATGAGCTGTCCCTGGTGAAGGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086421.9 ENSMUST00000202540.2 |
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| CDS CAA 72 bp | AGCTGCACCTTGAAGTGCTTGTTTCTCCCTGACGCTTaGAGAGACACGGAGAAGTCACTGGGCGAGGACTCG | + |
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Preference number: 6 (lower is better) Translates to: SCTLKCLFLPDA*RDTEKSLGEDS Trigger: CGAGTCCTCGCCCAGTGACTTCTCCGTGTCTCTCAAAGCGTCAGGGAGAAACAAGCACTTCAAGGTGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086421.9 |
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