Pregenerated sensors for NCF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026480Ensembl transcript IDs: ENSMUST00000027754.7, ENSMUST00000186568.7, ENSMUST00000190323.7
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCATTaGTGTGCAGCTCTGGGAATTCTTAAGTACATTCACGTAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LDTGCPVFPAERCAH*CAALGILKYIHVAS Trigger: GCTGGCTACGTGAATGTACTTAAGAATTCCCAGAGCTGCACACCAATGGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR CCA 90 bp | AGAAAGGGCTGTCATTCTAAGAGTTCCATTCTCCTTGGGACTGGATaGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTTCTTTAAT | + |
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Preference number: 1 (lower is better) Translates to: RKGCHSKSSILLGTG*CASWEPDSICLFFN Trigger: ATTAAAGAAAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGAACTCTTAGAATGACAGCCCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR CCA 90 bp | CCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCGAAAGGTGTGCCCATTaGTGTGCAGCTCTGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: PFSLGLDGVLHGNLIQSAERCAH*CAALGI Trigger: AATTCCCAGAGCTGCACACCAATGGGCACACCTTTC...GGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR GCA 90 bp | GAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCGAGATGGGTAAGTCTTaGAAGGGGAAAAACAACACT | + |
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Preference number: 2 (lower is better) Translates to: ELLDLDTGCPVFPAERCAEMGKS*KGKNNT Trigger: AGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTC...GGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR GCA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCGAGATGGGTAAGTCTTaGAAGGGGAAAAACAACACT | + |
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Preference number: 2 (lower is better) Translates to: SILLGTGWCASWEPDSICEMGKS*KGKNNT Trigger: AGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTC...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR CCA 90 bp | TCCACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGATTGGTGTGCAGCTCTaGGAATTCTTAAGTACATTC | + |
|
Preference number: 2 (lower is better) Translates to: STELLDLDTGCPVFPAERIGVQL*EFLSTF Trigger: GAATGTACTTAAGAATTCCCAGAGCTGCACACCAAT...CCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR CAA 90 bp | AAGGAAGAACCCTTTATTAATTATTTTTCCACTGAACTGTTGGACTaGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KEEPFINYFSTELLD*DTGCPVFPAERCAH Trigger: ATGGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGAAAAATAATTAATAAAGGGTTCTTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTTCTGAGTTGTCATATTaGTGTGTGACAGGTTCAATT | + |
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Preference number: 2 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFSELSY*CVTGSI Trigger: AATTGAACCTGTCACACAGCAATATGACAACTCAGA...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR CAA 90 bp | TTAATAAAGGAAGAACCCTTTATTAATTATTTTTCCACTGAACTGTaGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LIKEEPFINYFSTEL*DLDTGCPVFPAERC Trigger: ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGAAAAATAATTAATAAAGGGTTCTTCCTTTATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTTTCCCAGCAGAAAGGTGTGCCCATTGGTGTGCAGCTCTGGGAATTCTTTCCTTTGCAGAAAATTaGTCTCCCCCTCCTCCATCT | + |
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Preference number: 3 (lower is better) Translates to: PVFPAERCAHWCAALGILSFAEN*SPPPPS Trigger: AGATGGAGGAGGGGGAGACAAATTTTCTGCAAAGGA...AAGAATTCCCAGAGCTGCACACCAATGGGCACACCTTTCTGCTGGGAAAACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTAGAAAGGTGTGCCCATaGGTGTGCAGCTCTGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFRKVCP*VCSSGN Trigger: ATTCCCAGAGCTGCACACCAATGGGCACACCTTTCT...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR CAA 90 bp | ACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCATTGGTGTGCAGCTCTGAGAAAATCTTCTGAGTaGTCATATTGCTGTGTGACA | + |
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Preference number: 3 (lower is better) Translates to: TGCPVFPAERCAHWCAALRKSSE*SYCCVT Trigger: TGTCACACAGCAATATGACAACTCAGAAGATTTTCT...CAGAGCTGCACACCAATGGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTTCCTTTGCAGAAAATTaGTCTCCCCCTCCTCCATCT | + |
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Preference number: 3 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFSFAEN*SPPPPS Trigger: AGATGGAGGAGGGGGAGACAAATTTTCTGCAAAGGA...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR CAA 90 bp | CCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCAAACCTTCATTTCCTTaGCAGAAAATTTGTCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: PFSLGLDGVLHGNLIQSAKPSFP*QKICLP Trigger: GGGGAGACAAATTTTCTGCAAAGGAAATGAAGGTTT...GGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR CCA 72 bp | TCCAAACTGGTGTGTCTGTATAGCGCACAGCAGAGATaGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGC | + |
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Preference number: 3 (lower is better) Translates to: SKLVCLYSAQQR*VSLARGKTTLC Trigger: GCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTCTGCTGTGCGCTATACAGACACACCAGTTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR CCA 72 bp | AGTTCCATTCTCCTTGGGACTGGATGGTGTGCTTCATaGGAACCTGATTCAATCTGCCTTTTCTTTAATGCA | + |
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Preference number: 3 (lower is better) Translates to: SSILLGTGWCAS*EPDSICLFFNA Trigger: TGCATTAAAGAAAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR TCA 72 bp | TTTGTCTCCCCCTCCTCCATCTGTAAGAAAATCTTCTaGGTTGTCATATTGCTGTGTGACAGGTTCAATTTT | + |
|
Preference number: 3 (lower is better) Translates to: FVSPSSICKKIF*VVILLCDRFNF Trigger: AAAATTGAACCTGTCACACAGCAATATGACAACTCAGAAGATTTTCTTACAGATGGAGGAGGGGGAGACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR-3UTR CAA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAAAGAAAATCTTCTGAGTaGTCATATTGCTGTGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: KYIHVASTHTNLHFLCRKRKSSE*SYCCVT Trigger: TGTCACACAGCAATATGACAACTCAGAAGATTTTCT...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| 3UTR GCA 72 bp | CCTCCATCTGTAAGAAAATCTTCTGAGTTGTCATATTaGTGTGTGACAGGTTCAATTTTAATAGGGAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: PPSVRKSSELSY*CVTGSILIGKW Trigger: CCATTTCCCTATTAAAATTGAACCTGTCACACAGCAATATGACAACTCAGAAGATTTTCTTACAGATGGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | CCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCGGTCCTGCACCTCGCTaGAGGCCTCCAGGGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: PFSLGLDGVLHGNLIQSAGPAPR*RPPGHP Trigger: AGGGTGCCCTGGAGGCCTTCAGCGAGGTGCAGGACC...GGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCGGGAGGAGGCTCTGCTaGCTGTGGCTGCAGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SILLGTGWCASWEPDSICGRRLC*LWLQRG Trigger: GCCCCTCTGCAGCCACAGTCAGCAGAGCCTCCTCCC...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | TCCACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGCTCGAGTGGGGGTCCTaGACCTCGCTGAAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: STELLDLDTGCPVFPAERLEWGS*TSLKAS Trigger: GGAGGCCTTCAGCGAGGTGCAGGACCCCCACTCGAG...CCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | AGCGCACAGCAGAGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCGGTCCTGCACCTCGCTaGAGGCCTCCAGGGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: SAQQRWVSLARGKTTLCFGPAPR*RPPGHP Trigger: AGGGTGCCCTGGAGGCCTTCAGCGAGGTGCAGGACC...GAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTCTGCTGTGCGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTCTCGAGTGGGGGTCCTaGACCTCGCTGAAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TELLDLDTGCPVFPAERCLEWGS*TSLKAS Trigger: GGAGGCCTTCAGCGAGGTGCAGGACCCCCACTCGAG...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | GAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCTGGCTCCAGGTAGTTaGAGGGGACAAGCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ELLDLDTGCPVFPAERCALAPGS*RGQAPS Trigger: AGAAGGGGCTTGTCCCCTGCAACTACCTGGAGCCAG...GGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR CCA 90 bp | AACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCAAGCAAATCCTCGAGTaGGGGTCCTGCACCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: NCWTWTLGVLFSQQKGVPKQILE*GSCTSL Trigger: CAGCGAGGTGCAGGACCCCCACTCGAGGATTTGCTT...GGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | CCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCCTGGCTCCAGGTAGTTaGAGGGGACAAGCCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PFSLGLDGVLHGNLIQSALAPGS*RGQAPS Trigger: AGAAGGGGCTTGTCCCCTGCAACTACCTGGAGCCAG...GGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | AACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCTGGTCACCCACCGTATaGTCACACCACAGAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NCWTWTLGVLFSQQKGVPWSPTV*SHHRVR Trigger: CCTGACTCTGTGGTGTGAGCATACGGTGGGTGACCA...GGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR CCA 90 bp | CCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCAAGCAAATCCTCGAGTaGGGGTCCTGCACCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: PFSLGLDGVLHGNLIQSAKQILE*GSCTSL Trigger: CAGCGAGGTGCAGGACCCCCACTCGAGGATTTGCTT...GGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | CCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCGGGCAGCCTCATAACTaGAGATTGCTACCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PFSLGLDGVLHGNLIQSAGQPHN*RLLPPG Trigger: CCCAGGTGGTAGCAATCTTCAGTTATGAGGCTGCCC...GGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | TCCACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGGAAGGCCTGCTCGGCTaGCTGCAAGTTTTCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: STELLDLDTGCPVFPAEREGLLG*LQVFQD Trigger: ATCCTGGAAAACTTGCAGGCAGCCGAGCAGGCCTTC...CCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCTCTGCTGACTGTGGCTaGAGAGGGGCGAAGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SILLGTGWCASWEPDSICSADCG*RGAKPE Trigger: TTCTGGCTTCGCCCCTCTGCAGCCACAGTCAGCAGA...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR CCA 90 bp | AACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCAGCCCTGAAGATTTCTaGGGTTTTGGGTCTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: NCWTWTLGVLFSQQKGVPSPEDF*GFGSGR Trigger: CCTCCCAGACCCAAAACCCCAGAAATCTTCAGGGCT...GGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | GAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCTGCTTACTGGCGTCTaGGTTTTCCCTTTGTATGGG | + |
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Preference number: 4 (lower is better) Translates to: ELLDLDTGCPVFPAERCALLTGV*VFPLYG Trigger: CCCATACAAAGGGAAAACTCAGACGCCAGTAAGCAG...GGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGGGCAGCCTCATAACTaGAGATTGCTACCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TELLDLDTGCPVFPAERCGQPHN*RLLPPG Trigger: CCCAGGTGGTAGCAATCTTCAGTTATGAGGCTGCCC...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCGTCCTTCTTGTCGGCTaGGAGCACCCCTTCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: SILLGTGWCASWEPDSICVLLVG*EHPFIP Trigger: TGGAATGAAGGGGTGCTCGCAGCCGACAAGAAGGAC...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR CCA 90 bp | AACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCCAGTTTAGTGTGTTCTaGCGAGAGCGCCAGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NCWTWTLGVLFSQQKGVPQFSVF*RERQLL Trigger: AAGAAGCTGGCGCTCTCGCCAGAACACACTAAACTG...GGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | TCCACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGCTGGAAGTAGGCCACTaGAGAGTGCTTGTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: STELLDLDTGCPVFPAERLEVGH*RVLVSV Trigger: AACAGAGACAAGCACTCTGCAGTGGCCTACTTCCAG...CCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGGCTCGAACAGCTTCTaGTTCCAGATGCTCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: TELLDLDTGCPVFPAERCGSNSF*FQMLSM Trigger: CATGGAGAGCATCTGGAAGCAGAAGCTGTTCGAGCC...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR GCA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTTGGTCACCCACCGTATaGTCACACCACAGAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFWSPTV*SHHRVR Trigger: CCTGACTCTGTGGTGTGAGCATACGGTGGGTGACCA...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR CCA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTAATCCGAAGCTCAACTaGCTCCAGGTAGTTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TELLDLDTGCPVFPAERCNPKLN*LQVVAG Trigger: CCCTGCAACTACCTGGAGCCAGTTGAGCTTCGGATT...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTCACCTTCCAGAGCCCTaGAGATTTCTGGGGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFHLPEP*RFLGFW Trigger: CCAAAACCCCAGAAATCTTCAGGGCTCTGGAAGGTG...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | CTCTTCCTGTTTGTCCATCTGAGGGACAGAAAGGGCTGTCATTCTAAGAGTTCCTTGCTTGTGACCTGGTaGCAACTGGAGTCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LFLFVHLRDRKGCHSKSSLLVTW*QLESSW Trigger: CCAGGAAGACTCCAGTTGTCACCAGGTCACAAGCAA...GGAACTCTTAGAATGACAGCCCTTTCTGTCCCTCAGATGGACAAACAGGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS-3UTR TCA 90 bp | AGCGCACAGCAGAGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCTTGCTTGTGACCTGGTaGCAACTGGAGTCTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAQQRWVSLARGKTTLCFLLVTW*QLESSW Trigger: CCAGGAAGACTCCAGTTGTCACCAGGTCACAAGCAA...GAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTCTGCTGTGCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTCTGGAAGTAGGCCACTaGAGAGTGCTTGTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TELLDLDTGCPVFPAERCLEVGH*RVLVSV Trigger: AACAGAGACAAGCACTCTGCAGTGGCCTACTTCCAG...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCTGTTTGTCCATCTGAGGGACAGAAAGGGCTGTCATTCTAAGAGTTCCGGCTCGAACAGCTTCTaGTTCCAGATGCTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LFLFVHLRDRKGCHSKSSGSNSF*FQMLSM Trigger: CATGGAGAGCATCTGGAAGCAGAAGCTGTTCGAGCC...GGAACTCTTAGAATGACAGCCCTTTCTGTCCCTCAGATGGACAAACAGGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | ACACACAAACCTTCATTTCCTTTGCAGAAAATTTGTCTCCCCCTCCTCCATCTGTCTGCTGACTGTGGCTaGAGAGGGGCGAAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: THKPSFPLQKICLPLLHLSADCG*RGAKPE Trigger: TTCTGGCTTCGCCCCTCTGCAGCCACAGTCAGCAGA...CAGATGGAGGAGGGGGAGACAAATTTTCTGCAAAGGAAATGAAGGTTTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTCCCAGGCATCCTTCATaGTTTCTTCGGACAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFPRHPS*FLRTGA Trigger: TGCTCCTGTCCGAAGAAAGCATGAAGGATGCCTGGG...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | AGCGCACAGCAGAGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGATTTCTGGGGTTTTaGGTCTGGGAGGAGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAQQRWVSLARGKTTLCFRFLGF*VWEEAL Trigger: CAGAGCCTCCTCCCAGACCCAAAACCCCAGAAATCT...GAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTCTGCTGTGCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | AGCGCACAGCAGAGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGCCCTGAAGATTTCTaGGGTTTTGGGTCTGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAQQRWVSLARGKTTLCFSPEDF*GFGSGR Trigger: CCTCCCAGACCCAAAACCCCAGAAATCTTCAGGGCT...GAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTCTGCTGTGCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTAATCCGAAGCTCAACTaGCTCCAGGTAGTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFNPKLN*LQVVAG Trigger: CCCTGCAACTACCTGGAGCCAGTTGAGCTTCGGATT...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCTGTTTGTCCATCTGAGGGACAGAAAGGGCTGTCATTCTAAGAGTTCCCAACTGGAGTCTTCCTaGGGGGCTAGAATTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLFVHLRDRKGCHSKSSQLESS*GARIRR Trigger: CCTCCTAATTCTAGCCCCCCAGGAAGACTCCAGTTG...GGAACTCTTAGAATGACAGCCCTTTCTGTCCCTCAGATGGACAAACAGGAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTCAAGCCGCGTCTCCATaGCCACTGTGTATTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TELLDLDTGCPVFPAERCQAASP*PLCICN Trigger: ATTACAAATACACAGTGGTCATGGAGACGCGGCTTG...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR TCA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTCTGCTTACTGGCGTCTaGGTTTTCCCTTTGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFLLTGV*VFPLYG Trigger: CCCATACAAAGGGAAAACTCAGACGCCAGTAAGCAG...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCATTGGTGTGCAGCTCTGTTCTTCATTCACATGTaGCAGTACCAGGATTACATC | + |
|
Preference number: 4 (lower is better) Translates to: TGCPVFPAERCAHWCAALFFIHM*QYQDYI Trigger: GATGTAATCCTGGTACTGTCACATGTGAATGAAGAA...CAGAGCTGCACACCAATGGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | TCCACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGCATGTTGGTTGCCAATaGCAACTGCTCTTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: STELLDLDTGCPVFPAERHVGCQ*QLLFCF Trigger: AAAGCAGAAGAGCAGTTGGCATTGGCAACCAACATG...CCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTTTTCCCAGCAGAAAGGTGTGCCCATTGGTGTGCAGCTCTGGGAATTCTTAGACTTCTCTGGGAATaGCTTCCAAATTCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVFPAERCAHWCAALGILRLLWE*LPNSWL Trigger: CAGCCAAGAATTTGGAAGGCATTCCCAGAGAAGTCT...AAGAATTCCCAGAGCTGCACACCAATGGGCACACCTTTCTGCTGGGAAAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCTCCAGATGCTCTCCATaGCCTTGTCGATCTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SILLGTGWCASWEPDSICSRCSP*PCRSWN Trigger: ATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGA...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCTGTTTGTCCATCTGAGGGACAGAAAGGGCTGTCATTCTAAGAGTTCCCAGTTTAGTGTGTTCTaGCGAGAGCGCCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLFVHLRDRKGCHSKSSQFSVF*RERQLL Trigger: AAGAAGCTGGCGCTCTCGCCAGAACACACTAAACTG...GGAACTCTTAGAATGACAGCCCTTTCTGTCCCTCAGATGGACAAACAGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTCATGTTGGTTGCCAATaGCAACTGCTCTTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TELLDLDTGCPVFPAERCHVGCQ*QLLFCF Trigger: AAAGCAGAAGAGCAGTTGGCATTGGCAACCAACATG...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCTGTTTGTCCATCTGAGGGACAGAAAGGGCTGTCATTCTAAGAGTTCCAAATTCCAGGTCTTCTaGCTGGGCAGCCTCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: LFLFVHLRDRKGCHSKSSKFQVF*LGSLIT Trigger: AGTTATGAGGCTGCCCAGCCAGAAGACCTGGAATTT...GGAACTCTTAGAATGACAGCCCTTTCTGTCCCTCAGATGGACAAACAGGAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | AGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGCTTTGTAGATGTCCTTCTTGTCGGCTaGGAGCACCCCTTCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RWVSLARGKTTLCFSFVDVLLVG*EHPFIP Trigger: TGGAATGAAGGGGTGCTCGCAGCCGACAAGAAGGAC...ATCTACAAAGCTGAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | CCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTCCTCTTTCTTGGCATaGATGAGAGCAATATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PFSLGLDGVLHGNLIQSASSFLA*MRAILY Trigger: GTACAATATTGCTCTCATGCATGCCAAGAAAGAGGA...GGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| 3UTR CAA 72 bp | ACAGAAAGGGCTGTCATTCTAAGAGTTCCATTCTCCTaGGGACTGGATGGTGTGCTTCATGGGAACCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TERAVILRVPFS*GLDGVLHGNLI Trigger: AATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGAACTCTTAGAATGACAGCCCTTTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR TCA 90 bp | CCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCCTTTCTTGGCATGCATaGGAGCAATATTGTACAATA | + |
|
Preference number: 4 (lower is better) Translates to: PFSLGLDGVLHGNLIQSALSWHA*EQYCTI Trigger: TATTGTACAATATTGCTCTCATGCATGCCAAGAAAG...GGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR TCA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAATCCTTTTTGGCCAGCTaGGCCACCTGCCTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KYIHVASTHTNLHFLCRKSFLAS*ATCLSF Trigger: AAATGAGAGGCAGGTGGCTCAGCTGGCCAAAAAGGA...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR TCA 90 bp | AGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGCTTTGTAGATCACCTTCCAGAGCCCTaGAGATTTCTGGGGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RWVSLARGKTTLCFSFVDHLPEP*RFLGFW Trigger: CCAAAACCCCAGAAATCTTCAGGGCTCTGGAAGGTG...ATCTACAAAGCTGAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCTCCTCTTTCTTGGCATaGATGAGAGCAATATTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SILLGTGWCASWEPDSICSSFLA*MRAILY Trigger: GTACAATATTGCTCTCATGCATGCCAAGAAAGAGGA...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAAGCTTCTGCTTCCAGATaGTCTCCATGGCCTTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KYIHVASTHTNLHFLCRKASASR*SPWPCR Trigger: TCGACAAGGCCATGGAGAGCATCTGGAAGCAGAAGC...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCTTTAAGCCTTCGGGAAAATaGCAACTTTCCCTTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: FSLGLDGVLHGNLIQSAFKPSGK*QLSLYT Trigger: AGTGTAAAGGGAAAGTTGGCATTTTCCCGAAGGCTT...AAAGGCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAACAACTGGAGTCTTCCTaGGGGGCTAGAATTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KYIHVASTHTNLHFLCRKQLESS*GARIRR Trigger: CCTCCTAATTCTAGCCCCCCAGGAAGACTCCAGTTG...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR TCA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTCTTTCTTGGCATGCATaGGAGCAATATTGTACAATA | + |
|
Preference number: 4 (lower is better) Translates to: TELLDLDTGCPVFPAERCLSWHA*EQYCTI Trigger: TATTGTACAATATTGCTCTCATGCATGCCAAGAAAG...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR TCA 90 bp | AGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGCTTTGTAGATCAAGCCGCGTCTCCATaGCCACTGTGTATTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RWVSLARGKTTLCFSFVDQAASP*PLCICN Trigger: ATTACAAATACACAGTGGTCATGGAGACGCGGCTTG...ATCTACAAAGCTGAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAATCCAGATGCTCTCCATaGCCTTGTCGATCTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KYIHVASTHTNLHFLCRKSRCSP*PCRSWN Trigger: ATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGA...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAAAAATTCCAGGTCTTCTaGCTGGGCAGCCTCATAACT | + |
|
Preference number: 4 (lower is better) Translates to: KYIHVASTHTNLHFLCRKKFQVF*LGSLIT Trigger: AGTTATGAGGCTGCCCAGCCAGAAGACCTGGAATTT...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | AGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGCTTTGTAGATAGACTTCTCTGGGAATaGCTTCCAAATTCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWVSLARGKTTLCFSFVDRLLWE*LPNSWL Trigger: CAGCCAAGAATTTGGAAGGCATTCCCAGAGAAGTCT...ATCTACAAAGCTGAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR GCA 90 bp | AGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGCTTTGTAGATAAGCCTTCGGGAAAATaGCAACTTTCCCTTTACACT | + |
|
Preference number: 4 (lower is better) Translates to: RWVSLARGKTTLCFSFVDKPSGK*QLSLYT Trigger: AGTGTAAAGGGAAAGTTGGCATTTTCCCGAAGGCTT...ATCTACAAAGCTGAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CCA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAATGCCTTCCAAATTCTTaGCTGCACATCCTTCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: KYIHVASTHTNLHFLCRKCLPNS*LHILQQ Trigger: TTGTTGAAGGATGTGCAGCCAAGAATTTGGAAGGCA...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 90 bp | CTCGCTGAAGGCCTCCAGGGCACCCTTCCAGTCCTTCTTGTCGGCTaGGAGCACCCCTTCATTCCAGAGTCTGATGGCCTCAGCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAEGLQGTLPVLLVG*EHPFIPESDGLSQG Trigger: TCCCTGGCTGAGGCCATCAGACTCTGGAATGAAGGGGTGCTCGCAGCCGACAAGAAGGACTGGAAGGGTGCCCTGGAGGCCTTCAGCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 90 bp | GTGTTCACGCAGCCTATGTTGAAGCAAATCCTCGAGTGGGGGTCCTaGACCTCGCTGAAGGCCTCCAGGGCACCCTTCCAGTCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VFTQPMLKQILEWGS*TSLKASRAPFQSFL Trigger: CAAGAAGGACTGGAAGGGTGCCCTGGAGGCCTTCAGCGAGGTGCAGGACCCCCACTCGAGGATTTGCTTCAACATAGGCTGCGTGAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CCA 90 bp | TCCAGGATAGTGTTCACGCAGCCTATGTTGAAGCAAATCCTCGAGTaGGGGTCCTGCACCTCGCTGAAGGCCTCCAGGGCACCCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRIVFTQPMLKQILE*GSCTSLKASRAPFQ Trigger: CTGGAAGGGTGCCCTGGAGGCCTTCAGCGAGGTGCAGGACCCCCACTCGAGGATTTGCTTCAACATAGGCTGCGTGAACACTATCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CCA 90 bp | AAGCTCGTGGCTGTCCCGACGCCGGTAGCTCAGTTTAGTGTGTTCTaGCGAGAGCGCCAGCTTCTTAGACACCATGTTCCGAAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KLVAVPTPVAQFSVF*RERQLLRHHVPKLA Trigger: AGCCAGCTTCGGAACATGGTGTCTAAGAAGCTGGCGCTCTCGCCAGAACACACTAAACTGAGCTACCGGCGTCGGGACAGCCACGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | AACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCCCCCTTCCAGTCCTTCTaGTCGGCTGCGAGCACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NCWTWTLGVLFSQQKGVPPFQSF*SAASTP Trigger: AGGGGTGCTCGCAGCCGACAAGAAGGACTGGAAGGG...GGGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 90 bp | CACAAATTCCAGGTCTTCTGGCTGGGCAGCCTCATAACTGAAGATTaGTACCACCTGGGTCCCCTCCTTAGGCTGAGGCTCCGTAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKFQVFWLGSLITED*YHLGPLLRLRLRSL Trigger: CAGACTACGGAGCCTCAGCCTAAGGAGGGGACCCAGGTGGTAGCAATCTTCAGTTATGAGGCTGCCCAGCCAGAAGACCTGGAATTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCCCCTTCCAGTCCTTCTaGTCGGCTGCGAGCACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SILLGTGWCASWEPDSICPFQSF*SAASTP Trigger: AGGGGTGCTCGCAGCCGACAAGAAGGACTGGAAGGG...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 90 bp | GCCACTGCAGAGTGCTTGTCTCTGTTGATGCTTTTGGTGAAGGCCTaGTCGGCTGCCTGCAAGTTTTCCAGGATAGTGTTCACGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ATAECLSLLMLLVKA*SAACKFSRIVFTQP Trigger: AGGCTGCGTGAACACTATCCTGGAAAACTTGCAGGCAGCCGAGCAGGCCTTCACCAAAAGCATCAACAGAGACAAGCACTCTGCAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | TCCACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGATGGCCTTGTCGATCTaGGAATGCCTGGGCTCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: STELLDLDTGCPVFPAERMALSI*ECLGSD Trigger: GTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCAT...CCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 90 bp | AGCTTCTGCTTCCAGATGCTCTCCATGGCCTTGTCGATCTTGGAATaGCTGGGCTCGGACTTCATGTTGGTTGCCAATGCCAACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFCFQMLSMALSILE*LGSDFMLVANANCS Trigger: AGAGCAGTTGGCATTGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGAAGCAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS CCA 90 bp | TCTGCTTCCAGATGCTCTCCATGGCCTTGTCGATCTTGGAATGCCTaGGCTCGGACTTCATGTTGGTTGCCAATGCCAACTGCTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SASRCSPWPCRSWNA*ARTSCWLPMPTALL Trigger: CAGAAGAGCAGTTGGCATTGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGAAGCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS-3UTR CAA 90 bp | TCCACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGAGCCCCTTCTGTCCATaGAACATGACTGTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: STELLDLDTGCPVFPAERSPFCP*NMTVAQ Trigger: CTGGGCCACAGTCATGTTCAATGGACAGAAGGGGCT...CCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCAGCCCCTTCTGTCCATaGAACATGACTGTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SILLGTGWCASWEPDSICSPFCP*NMTVAQ Trigger: CTGGGCCACAGTCATGTTCAATGGACAGAAGGGGCT...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | AGCGCACAGCAGAGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCTCACAGGCAAACAGCTaGAACTGCAGCCCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SAQQRWVSLARGKTTLCFSQANS*NCSPRI Trigger: GATCCTGGGGCTGCAGTTCAAGCTGTTTGCCTGTGA...GAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTCTGCTGTGCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | TCCACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGGCAGTAGTTTTTCACTaGGCCCCAGGCATCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: STELLDLDTGCPVFPAERAVVFH*APGILH Trigger: ATGAAGGATGCCTGGGGCCAAGTGAAAAACTACTGC...CCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | CCTGTTTTCCCAGCAGAAAGGTGTGCCCATTGGTGTGCAGCTCTGGGAATTCTTGCAGTAGTTTTTCACTaGGCCCCAGGCATCCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PVFPAERCAHWCAALGILAVVFH*APGILH Trigger: ATGAAGGATGCCTGGGGCCAAGTGAAAAACTACTGC...AAGAATTCCCAGAGCTGCACACCAATGGGCACACCTTTCTGCTGGGAAAACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 90 bp | TGCTTGTCTCTGTTGATGCTTTTGGTGAAGGCCTGCTCGGCTGCCTaGAAGTTTTCCAGGATAGTGTTCACGCAGCCTATGTTGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLSLLMLLVKACSAA*KFSRIVFTQPMLKQ Trigger: TTGCTTCAACATAGGCTGCGTGAACACTATCCTGGAAAACTTGCAGGCAGCCGAGCAGGCCTTCACCAAAAGCATCAACAGAGACAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 90 bp | CTTCTCCATTCTGTAGTAGAGCATTCCTCTCTGGAAGTAGGCCACTaGAGAGTGCTTGTCTCTGTTGATGCTTTTGGTGAAGGCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLHSVVEHSSLEVGH*RVLVSVDAFGEGLL Trigger: GAGCAGGCCTTCACCAAAAGCATCAACAGAGACAAGCACTCTGCAGTGGCCTACTTCCAGAGAGGAATGCTCTACTACAGAATGGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | TCCATTCTCCTTGGGACTGGATGGTGTGCTTCATGGGAACCTGATTCAATCTGCTTCACGCAGCCTATGTaGAAGCAAATCCTCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SILLGTGWCASWEPDSICFTQPM*KQILEW Trigger: CCACTCGAGGATTTGCTTCAACATAGGCTGCGTGAA...GCAGATTGAATCAGGTTCCCATGAAGCACACCATCCAGTCCCAAGGAGAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | GAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCGCCTCTTTAAGGTCTTaGATAGCAAGGTCGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELLDLDTGCPVFPAERCAASLRS*IARSYF Trigger: GAAGTACGACCTTGCTATCAAAGACCTTAAAGAGGC...GGCACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS TCA 90 bp | AGTTATCACTGCCCTTCTTCAAGACAAAGACGATGTTCCCAGGCATaGCCTGTAGCTCTTCTGGCGTCTCCGGCACAAAGCCAAACAATA | + |
|
Preference number: 5 (lower is better) Translates to: SYHCPSSRQRRCSQA*PVALLASPAQSQTI Trigger: TATTGTTTGGCTTTGTGCCGGAGACGCCAGAAGAGCTACAGGTCATGCCTGGGAACATCGTCTTTGTCTTGAAGAAGGGCAGTGATAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCTGTTTGTCCATCTGAGGGACAGAAAGGGCTGTCATTCTAAGAGTTCCGAGTGCTTGTCTCTGTaGATGCTTTTGGTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LFLFVHLRDRKGCHSKSSECLSL*MLLVKA Trigger: GGCCTTCACCAAAAGCATCAACAGAGACAAGCACTC...GGAACTCTTAGAATGACAGCCCTTTCTGTCCCTCAGATGGACAAACAGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | ACACACAAACCTTCATTTCCTTTGCAGAAAATTTGTCTCCCCCTCCTCCATCTGTCACAGGCAAACAGCTaGAACTGCAGCCCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: THKPSFPLQKICLPLLHLSQANS*NCSPRI Trigger: GATCCTGGGGCTGCAGTTCAAGCTGTTTGCCTGTGA...CAGATGGAGGAGGGGGAGACAAATTTTCTGCAAAGGAAATGAAGGTTTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTGCCTCTTTAAGGTCTTaGATAGCAAGGTCGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TELLDLDTGCPVFPAERCASLRS*IARSYF Trigger: GAAGTACGACCTTGCTATCAAAGACCTTAAAGAGGC...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | AGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGCTTTGTAGATATGGCCTTGTCGATCTaGGAATGCCTGGGCTCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RWVSLARGKTTLCFSFVDMALSI*ECLGSD Trigger: GTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCAT...ATCTACAAAGCTGAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | ACTGAACTGTTGGACTTGGACACTGGGTGTCCTGTTTTCCCAGCAGAAAGGTGTTGCATGAGAGCAATATaGTACAATACCTCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TELLDLDTGCPVFPAERCCMRAI*YNTSQA Trigger: TGCCTGTGAGGTATTGTACAATATTGCTCTCATGCA...ACACCTTTCTGCTGGGAAAACAGGACACCCAGTGTCCAAGTCCAACAGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | AGCGCACAGCAGAGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCATGCCTTCCAAATTCTaGGCTGCACATCCTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SAQQRWVSLARGKTTLCFMPSKF*AAHPST Trigger: TGTTGAAGGATGTGCAGCCAAGAATTTGGAAGGCAT...GAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCTCTGCTGTGCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAAAAGATTTCTGGGGTTTaGGGTCTGGGAGGAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KYIHVASTHTNLHFLCRKKISGV*GLGGGS Trigger: AGAGCCTCCTCCCAGACCCAAAACCCCAGAAATCTT...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS TCA 90 bp | AACTTTCCCTTTACACTCCCCTTCCAGCCATTCTTCATTCACATGTaGCAGTACCAGGATTACATCTCCTTCCACAAATTCCAGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NFPFTLPFQPFFIHM*QYQDYISFHKFQVF Trigger: GAAGACCTGGAATTTGTGGAAGGAGATGTAATCCTGGTACTGTCACATGTGAATGAAGAATGGCTGGAAGGGGAGTGTAAAGGGAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | AGATGGGTAAGTCTTGCAAGGGGAAAAACAACACTTTGCTTCAGCTTTGTAGATTTCACGCAGCCTATGTaGAAGCAAATCCTCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWVSLARGKTTLCFSFVDFTQPM*KQILEW Trigger: CCACTCGAGGATTTGCTTCAACATAGGCTGCGTGAA...ATCTACAAAGCTGAAGCAAAGTGTTGTTTTTCCCCTTGCAAGACTTACCCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS-3UTR CAA 90 bp | AAGTACATTCACGTAGCCAGCACACACACAAACCTTCATTTCCTTTGCAGAAAAATGCCTTCCAAATTCTaGGCTGCACATCCTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: KYIHVASTHTNLHFLCRKMPSKF*AAHPST Trigger: TGTTGAAGGATGTGCAGCCAAGAATTTGGAAGGCAT...TTTTCTGCAAAGGAAATGAAGGTTTGTGTGTGTGCTGGCTACGTGAATGTACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS CAA 90 bp | TCCTGCACCTCGCTGAAGGCCTCCAGGGCACCCTTCCAGTCCTTCTaGTCGGCTGCGAGCACCCCTTCATTCCAGAGTCTGATGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCTSLKASRAPFQSF*SAASTPSFQSLMAS Trigger: TGAGGCCATCAGACTCTGGAATGAAGGGGTGCTCGCAGCCGACAAGAAGGACTGGAAGGGTGCCCTGGAGGCCTTCAGCGAGGTGCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 72 bp | CAGCCTATGTTGAAGCAAATCCTCGAGTGGGGGTCCTaGACCTCGCTGAAGGCCTCCAGGGCACCCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPMLKQILEWGS*TSLKASRAPFQ Trigger: CTGGAAGGGTGCCCTGGAGGCCTTCAGCGAGGTGCAGGACCCCCACTCGAGGATTTGCTTCAACATAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CAA 72 bp | TCGCTGAAGGCCTCCAGGGCACCCTTCCAGTCCTTCTaGTCGGCTGCGAGCACCCCTTCATTCCAGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLKASRAPFQSF*SAASTPSFQSL Trigger: CAGACTCTGGAATGAAGGGGTGCTCGCAGCCGACAAGAAGGACTGGAAGGGTGCCCTGGAGGCCTTCAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CCA 72 bp | GTGTTCACGCAGCCTATGTTGAAGCAAATCCTCGAGTaGGGGTCCTGCACCTCGCTGAAGGCCTCCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VFTQPMLKQILE*GSCTSLKASRA Trigger: TGCCCTGGAGGCCTTCAGCGAGGTGCAGGACCCCCACTCGAGGATTTGCTTCAACATAGGCTGCGTGAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS CAA 72 bp | AGTCCTTTTTGGCCAGCTGAGCCACCTGCCTCTCATTaGGACGGAACAGCCGACCCACAGGGATCACCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SPFWPAEPPASH*DGTADPQGSPR Trigger: CCGTGGTGATCCCTGTGGGTCGGCTGTTCCGTCCAAATGAGAGGCAGGTGGCTCAGCTGGCCAAAAAGGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 72 bp | CGACCCACAGGGATCACCACGGGCTCGAACAGCTTCTaGTTCCAGATGCTCTCCATGGCCTTGTCGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPTGITTGSNSF*FQMLSMALSIL Trigger: CAAGATCGACAAGGCCATGGAGAGCATCTGGAAGCAGAAGCTGTTCGAGCCCGTGGTGATCCCTGTGGGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS GCA 72 bp | CAGGTCTTCTGGCTGGGCAGCCTCATAACTGAAGATTaGTACCACCTGGGTCCCCTCCTTAGGCTGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QVFWLGSLITED*YHLGPLLRLRL Trigger: GAGCCTCAGCCTAAGGAGGGGACCCAGGTGGTAGCAATCTTCAGTTATGAGGCTGCCCAGCCAGAAGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CCA 72 bp | GCTGTCCCGACGCCGGTAGCTCAGTTTAGTGTGTTCTaGCGAGAGCGCCAGCTTCTTAGACACCATGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AVPTPVAQFSVF*RERQLLRHHVP Trigger: CGGAACATGGTGTCTAAGAAGCTGGCGCTCTCGCCAGAACACACTAAACTGAGCTACCGGCGTCGGGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CAA 90 bp | TCGGCTGCCTGCAAGTTTTCCAGGATAGTGTTCACGCAGCCTATGTaGAAGCAAATCCTCGAGTGGGGGTCCTGCACCTCGCTGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAACKFSRIVFTQPM*KQILEWGSCTSLKA Trigger: GGCCTTCAGCGAGGTGCAGGACCCCCACTCGAGGATTTGCTTCAACATAGGCTGCGTGAACACTATCCTGGAAAACTTGCAGGCAGCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CAA 90 bp | ACCACGGGCTCGAACAGCTTCTGCTTCCAGATGCTCTCCATGGCCTaGTCGATCTTGGAATGCCTGGGCTCGGACTTCATGTTGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TTGSNSFCFQMLSMA*SILECLGSDFMLVA Trigger: GGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGAAGCAGAAGCTGTTCGAGCCCGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS GCA 72 bp | TGGCGTCTCCGGCACAAAGCCAAACAATACGCGGTGTaGCTCACCTTCCAGAGCCCTGAAGATTTCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: WRLRHKAKQYAV*LTFQSPEDFWG Trigger: ACCCCAGAAATCTTCAGGGCTCTGGAAGGTGAGGCACACCGCGTATTGTTTGGCTTTGTGCCGGAGACGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS TCA 72 bp | CTGAAGATTGCTACCACCTGGGTCCCCTCCTTAGGCTaGGGCTCCGTAGTCTGCTTACTGGCGTCTGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LKIATTWVPSLG*GSVVCLLASEF Trigger: AAACTCAGACGCCAGTAAGCAGACTACGGAGCCTCAGCCTAAGGAGGGGACCCAGGTGGTAGCAATCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CAA 72 bp | CTGTGGCTGCAGAGGGGCGAAGCCAGAAAAGTTGTCTaGGTGAACCACAGATGCTACAACCGTAGCCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LWLQRGEARKVV*VNHRCYNRSLA Trigger: GGCAAGGCTACGGTTGTAGCATCTGTGGTTCACCAAGACAACTTTTCTGGCTTCGCCCCTCTGCAGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 72 bp | GTCTCTGTTGATGCTTTTGGTGAAGGCCTGCTCGGCTaGCTGCAAGTTTTCCAGGATAGTGTTCACGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSVDAFGEGLLG*LQVFQDSVHAA Trigger: GGCTGCGTGAACACTATCCTGGAAAACTTGCAGGCAGCCGAGCAGGCCTTCACCAAAAGCATCAACAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS GCA 72 bp | TTCCAGATGCTCTCCATGGCCTTGTCGATCTTGGAATaGCTGGGCTCGGACTTCATGTTGGTTGCCAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: FQMLSMALSILE*LGSDFMLVANA Trigger: GGCATTGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS CCA 72 bp | TCTGCTTCCAGATGCTCTCCATGGCCTTGTCGATCTTaGAATGCCTGGGCTCGGACTTCATGTTGGTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SASRCSPWPCRS*NAWARTSCWLP Trigger: TGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS CAA 72 bp | TTCTGCTTCCAGATGCTCTCCATGGCCTTGTCGATCTaGGAATGCCTGGGCTCGGACTTCATGTTGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FCFQMLSMALSI*ECLGSDFMLVA Trigger: GGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGAAGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS CAA 72 bp | TCGAACAGCTTCTGCTTCCAGATGCTCTCCATGGCCTaGTCGATCTTGGAATGCCTGGGCTCGGACTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: SNSFCFQMLSMA*SILECLGSDFM Trigger: CATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCATGGAGAGCATCTGGAAGCAGAAGCTGTTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS CAA 90 bp | ACCCACCGTATGCTCACACCACAGAGTCAGGCAGTAGTTTTTCACTaGGCCCCAGGCATCCTTCATGCTTTCTTCGGACAGGAGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: THRMLTPQSQAVVFH*APGILHAFFGQEQK Trigger: CTTCTGCTCCTGTCCGAAGAAAGCATGAAGGATGCCTGGGGCCAAGTGAAAAACTACTGCCTGACTCTGTGGTGTGAGCATACGGTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CCA 72 bp | AGATGCTCTCCATGGCCTTGTCGATCTTGGAATGCCTaGGCTCGGACTTCATGTTGGTTGCCAATGCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RCSPWPCRSWNA*ARTSCWLPMPT Trigger: AGTTGGCATTGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAAGGCCATGGAGAGCATCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS CAA 72 bp | TGCAAGTTTTCCAGGATAGTGTTCACGCAGCCTATGTaGAAGCAAATCCTCGAGTGGGGGTCCTGCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: CKFSRIVFTQPM*KQILEWGSCTS Trigger: CGAGGTGCAGGACCCCCACTCGAGGATTTGCTTCAACATAGGCTGCGTGAACACTATCCTGGAAAACTTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
||
| CDS CCA 72 bp | TGTCGATCTTGGAATGCCTGGGCTCGGACTTCATGTTaGTTGCCAATGCCAACTGCTCTTCTGCTTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRSWNAWARTSC*LPMPTALLLSS Trigger: GGAAGAAAGCAGAAGAGCAGTTGGCATTGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
||
| CDS CAA 72 bp | ATGCTCACACCACAGAGTCAGGCAGTAGTTTTTCACTaGGCCCCAGGCATCCTTCATGCTTTCTTCGGACAG | + |
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Preference number: 6 (lower is better) Translates to: MLTPQSQAVVFH*APGILHAFFGQ Trigger: CTGTCCGAAGAAAGCATGAAGGATGCCTGGGGCCAAGTGAAAAACTACTGCCTGACTCTGTGGTGTGAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS GCA 72 bp | GATCTTGGAATGCCTGGGCTCGGACTTCATGTTGGTTaGCAATGCCAACTGCTCTTCTGCTTTCTTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: DLGMPGLGLHVG*QCQLLFCFLPF Trigger: GAATGGAAGAAAGCAGAAGAGCAGTTGGCATTGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
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| CDS CAA 72 bp | CGATCTTGGAATGCCTGGGCTCGGACTTCATGTTGGTaGCCAATGCCAACTGCTCTTCTGCTTTCTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: RSWNAWARTSCW*PMPTALLLSSI Trigger: AATGGAAGAAAGCAGAAGAGCAGTTGGCATTGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
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| CDS CAA 72 bp | TTGTCGATCTTGGAATGCCTGGGCTCGGACTTCATGTaGGTTGCCAATGCCAACTGCTCTTCTGCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSILECLGSDFM*VANANCSSAFF Trigger: GAAGAAAGCAGAAGAGCAGTTGGCATTGGCAACCAACATGAAGTCCGAGCCCAGGCATTCCAAGATCGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 ENSMUST00000190323.7 |
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| CDS TCA 72 bp | CTTAGGCTGAGGCTCCGTAGTCTGCTTACTGGCGTCTaGGTTTTCCCTTTGTATGGGTTCATCAATAAGACC | + |
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Preference number: 6 (lower is better) Translates to: LRLRLRSLLTGV*VFPLYGFINKT Trigger: GGTCTTATTGATGAACCCATACAAAGGGAAAACTCAGACGCCAGTAAGCAGACTACGGAGCCTCAGCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS GCA 72 bp | GGCGAAGCCAGAAAAGTTGTCTTGGTGAACCACAGATaGTACAACCGTAGCCTTGCCCAGATAGTCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: GEARKVVLVNHR*YNRSLAQIVLF Trigger: AAAAAGGACTATCTGGGCAAGGCTACGGTTGTAGCATCTGTGGTTCACCAAGACAACTTTTCTGGCTTCGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS CCA 72 bp | GAGTTTTCCCTTTGTATGGGTTCATCAATAAGACCTTaGTCACCCACCGTATGCTCACACCACAGAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: EFSLCMGSSIRP*SPTVCSHHRVR Trigger: CCTGACTCTGTGGTGTGAGCATACGGTGGGTGACCAAGGTCTTATTGATGAACCCATACAAAGGGAAAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS CCA 72 bp | CAGGATTACATCTCCTTCCACAAATTCCAGGTCTTCTaGCTGGGCAGCCTCATAACTGAAGATTGCTACCAC | + |
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Preference number: 6 (lower is better) Translates to: QDYISFHKFQVF*LGSLITEDCYH Trigger: GTGGTAGCAATCTTCAGTTATGAGGCTGCCCAGCCAGAAGACCTGGAATTTGTGGAAGGAGATGTAATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS GCA 72 bp | CTAGACTTCTCTGGGAATGCCTTCCAAATTCTTGGCTaGACATCCTTCAACAAAAGCCTTCGGGAAAATGCC | + |
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Preference number: 6 (lower is better) Translates to: LDFSGNAFQILG*TSFNKSLRENA Trigger: GGCATTTTCCCGAAGGCTTTTGTTGAAGGATGTGCAGCCAAGAATTTGGAAGGCATTCCCAGAGAAGTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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| CDS TCA 72 bp | TTTACACTCCCCTTCCAGCCATTCTTCATTCACATGTaGCAGTACCAGGATTACATCTCCTTCCACAAATTC | + |
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Preference number: 6 (lower is better) Translates to: FTLPFQPFFIHM*QYQDYISFHKF Trigger: GAATTTGTGGAAGGAGATGTAATCCTGGTACTGTCACATGTGAATGAAGAATGGCTGGAAGGGGAGTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027754.7 ENSMUST00000186568.7 |
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