Pregenerated sensors for NCF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015950Ensembl transcript IDs: ENSMUST00000016094.13, ENSMUST00000111275.8, ENSMUST00000144086.2, ENSMUST00000146354.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTCAGCCTGCCTTCTTATAGAACCCAGGGCCACCAGCCTAGGATaGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACC | + |
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Preference number: 1 (lower is better) Translates to: CSACLLIEPRATSLG*HHQPRMAPPTVGWT Trigger: GGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGCCCTGGGTTCTATAAGAAGGCAGGCTGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR GCA 90 bp | TGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTaGCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGAACC | + |
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Preference number: 1 (lower is better) Translates to: WRQELMQRPWRGAAY*LAPHRLLSLPSYRT Trigger: GGTTCTATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR TCA 90 bp | CCAGCCAGCGCGGTTTCTTTGCATTTGGGGATGGAAATAGAGACATaGAAGCAAAGTCTCCGCATCACTAATGACACTAAAATGACACTA | + |
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Preference number: 1 (lower is better) Translates to: PASAVSLHLGMEIET*KQSLRITNDTKMTL Trigger: TAGTGTCATTTTAGTGTCATTAGTGATGCGGAGACTTTGCTTTCATGTCTCTATTTCCATCCCCAAATGCAAAGAAACCGCGCTGGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR TCA 90 bp | AACCTGGGATACATAGTGAAACCTGTTTCCCAAGAAGAAACGTGCTaGAAGTATTTTATCTCTGGAGCAACTGGAATGGCAGGCCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: NLGYIVKPVSQEETC*KYFISGATGMAGLQ Trigger: TTGCAGGCCTGCCATTCCAGTTGCTCCAGAGATAAAATACTTTCAGCACGTTTCTTCTTGGGAAACAGGTTTCACTATGTATCCCAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
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| 3UTR GCA 90 bp | CAATGTCATCATGAGTTGTCTTTTGCAAGATGTGCGGCTTCATTTTaGACCACGGCTTCTGATTCAGTTAGGGTTTCTATTGCTGAGATA | + |
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Preference number: 1 (lower is better) Translates to: QCHHELSFARCAASF*TTASDSVRVSIAEI Trigger: TATCTCAGCAATAGAAACCCTAACTGAATCAGAAGCCGTGGTGCAAAATGAAGCCGCACATCTTGCAAAAGACAACTCATGATGACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
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| 3UTR CAA 90 bp | CGCGGAGGCACCGCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATaGTCTGCAAACCAAAGCCAGGACCATCAGAAGCCCCAGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RGGTAGCGLTRGVDG*SANQSQDHQKPQPP Trigger: GGGAGGCTGGGGCTTCTGATGGTCCTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCGGTGCCTCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144086.2 |
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| 3UTR-3UTR GCA 90 bp | GCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGCGAAGCCAGGCCCGGTTaGATGCTAGTCAAGCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: ATSLGWHHQPRMAPPTVGEARPG*MLVKLY Trigger: GTAGAGCTTGACTAGCATGCAACCGGGCCTGGCTTC...GCCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAACCACCAGCCCAGGATaGCACCACCAACTGTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CRGHGGVLLTALLPIACSTTSPG*HHQLWA Trigger: AGCCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGT...TGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACCAAGAGCAGGGCAGGATCCTaGAGGCAGGAGCTGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: AQDGTTNCGLDPPPLITKSRAGS*RQELMQ Trigger: CTGCATCAGCTCCTGCCTCCAGGATCCTGCCCTGCT...CTTGGTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCCTGAAATTACAGATGTaGGCCTCGGCTCGACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LEAGADAEAMEGCCLLPCLKLQM*ASARLP Trigger: GGGCAGTCGAGCCGAGGCTCACATCTGTAATTTCAG...GCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCCCTATTATGGGATGTTaGGAATGGAAGCCAGGCCCG | + |
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Preference number: 2 (lower is better) Translates to: AMEGCCLLPCSPSLAQPAPIMGC*EWKPGP Trigger: CGGGCCTGGCTTCCATTCCCAACATCCCATAATAGG...GGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGTACTGTGGTATGGGGTaGTTTGACCCAGGATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GHQPRMAPPAQDGTTNCGYCGMG*FDPGSH Trigger: GTGAGATCCTGGGTCAAACCACCCCATACCACAGTA...CCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACCAAGCTGATGCAGAGGCCATaGAGGGGTGCTGCTTACTGC | + |
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Preference number: 2 (lower is better) Translates to: AQDGTTNCGLDPPPLITKLMQRP*RGAAYC Trigger: GCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAG...CTTGGTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | GCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCGTTCCCTCTCTTAGATaGCACCAGCTCGTGTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: AMEGCCLLPCSPSLAQPAVPSLR*HQLVSS Trigger: ACTTGACACGAGCTGGTGTCATCTAAGAGAGGGAAC...GGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCCTGATGCTGGGACACTaGCACACCCTATTATGGGAT | + |
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Preference number: 2 (lower is better) Translates to: AMEGCCLLPCSPSLAQPALMLGH*HTLLWD Trigger: ATCCCATAATAGGGTGTGCCAGTGTCCCAGCATCAG...GGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCGTTCCCTCTCTTAGATaGCACCAGCTCGTGTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LEAGADAEAMEGCCLLPCVPSLR*HQLVSS Trigger: ACTTGACACGAGCTGGTGTCATCTAAGAGAGGGAAC...GCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGGACACTGGCACACCCTATTATGGGATGTTGGGAATGGAAGCCAGGCCCGAGGCCCTAGGGCAGTaGTTCTCAACCTCCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: CWDTGTPYYGMLGMEARPEALGQ*FSTSLV Trigger: CACTAGGGAGGTTGAGAAGCACTGCCCTAGGGCCTC...GGGCCTGGCTTCCATTCCCAACATCCCATAATAGGGTGTGCCAGTGTCCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCTACTGTGGTATGGGGTaGTTTGACCCAGGATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LEAGADAEAMEGCCLLPCYCGMG*FDPGSH Trigger: GTGAGATCCTGGGTCAAACCACCCCATACCACAGTA...GCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGATGGAAATAGAGACATaGAAGCAAAGTCTCCGCATC | + |
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Preference number: 2 (lower is better) Translates to: GHQPRMAPPAQDGTTNCGMEIET*KQSLRI Trigger: GATGCGGAGACTTTGCTTTCATGTCTCTATTTCCAT...CCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACGTTCCCTCTCTTAGATaGCACCAGCTCGTGTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: TSPGWHHQLWAGPSPINHVPSLR*HQLVSS Trigger: ACTTGACACGAGCTGGTGTCATCTAAGAGAGGGAAC...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGAACCCGAGGCCCTAGGGCAGTaGTTCTCAACCTCCCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: LLTALLPIACSACLLIEPEALGQ*FSTSLV Trigger: CACTAGGGAGGTTGAGAAGCACTGCCCTAGGGCCTC...GGGTTCTATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGAAGCCAGGCCCGGTTaGATGCTAGTCAAGCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: GVLLTALLPIACSACLLIEARPG*MLVKLY Trigger: GTAGAGCTTGACTAGCATGCAACCGGGCCTGGCTTC...TATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAACTGTGGGCTGGACCCTCCCCCATTAATCACCAAGATCTTATGGAGGCATGCCACCAGCCTAGGATaGCACCACCAGCCCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: TNCGLDPPPLITKILWRHATSLG*HHQPRM Trigger: CATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGC...ATGCCTCCATAAGATCTTGGTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGCTGGACCCTCCCCCATTAATCACCAAGATCTTATGGAGGCATATCCTCGAGGCCATGGAGGGGTaGTGCTTACTGCCTTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: CGLDPPPLITKILWRHILEAMEG*CLLPCS Trigger: GGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTC...GAGGATATGCCTCCATAAGATCTTGGTGATTAATGGGGGAGGGTCCAGCCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGTCTTAGGCAACCTCTaGGAAAGTCTTTTGACACCC | + |
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Preference number: 2 (lower is better) Translates to: CRGHGGVLLTALLPIACSVLGNL*ESLLTP Trigger: GGGTGTCAAAAGACTTTCCCAGAGGTTGCCTAAGAC...TGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGAACTGAAATTACAGATGTaGGCCTCGGCTCGACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: VLLTALLPIACSACLLIELKLQM*ASARLP Trigger: GGGCAGTCGAGCCGAGGCTCACATCTGTAATTTCAG...TTCTATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACCTTGACTCTTGGCTCTaGAATTACAGATGTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TSPGWHHQLWAGPSPINHLDSWL*NYRCEP Trigger: AGGCTCACATCTGTAATTTCAGAGCCAAGAGTCAAG...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCATGGAAATAGAGACATaGAAGCAAAGTCTCCGCATC | + |
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Preference number: 2 (lower is better) Translates to: LEAGADAEAMEGCCLLPCMEIET*KQSLRI Trigger: GATGCGGAGACTTTGCTTTCATGTCTCTATTTCCAT...GCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCATATATGCCTGTGTGAGGGTGTCAGATGCCCTAAAACCGGAGTTACAGGCCTGAAATTACAGATGTaGGCCTCGGCTCGACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LHICLCEGVRCPKTGVTGLKLQM*ASARLP Trigger: GGGCAGTCGAGCCGAGGCTCACATCTGTAATTTCAG...GCCTGTAACTCCGGTTTTAGGGCATCTGACACCCTCACACAGGCATATATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACATGGAAATAGAGACATaGAAGCAAAGTCTCCGCATC | + |
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Preference number: 2 (lower is better) Translates to: TSPGWHHQLWAGPSPINHMEIET*KQSLRI Trigger: GATGCGGAGACTTTGCTTTCATGTCTCTATTTCCAT...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGAACCCCTCAAATTCCCTACATaGCCCAGGCCGATCTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LLTALLPIACSACLLIEPLKFPT*PRPILS Trigger: ACTCAAGATCGGCCTGGGCCATGTAGGGAATTTGAG...GGGTTCTATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR CAA 90 bp | TTCCCTACATGGCCCAGGCCGATCTTGAGTCTAACTGCAGTTCTCTaGACTCTTGGCTCTGAAATTACAGATGTGAGCCTCGGCTCGACT | + |
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Preference number: 2 (lower is better) Translates to: FPTWPRPILSLTAVL*TLGSEITDVSLGST Trigger: AGTCGAGCCGAGGCTCACATCTGTAATTTCAGAGCCAAGAGTCAAGAGAACTGCAGTTAGACTCAAGATCGGCCTGGGCCATGTAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGCCGATCTTGAGTCTAACTGCAGTTCTCTTGACTCTTGGCTCTGAAATTGAAGCCAGGCCCGGTTaGATGCTAGTCAAGCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: PRPILSLTAVLLTLGSEIEARPG*MLVKLY Trigger: GTAGAGCTTGACTAGCATGCAACCGGGCCTGGCTTC...AATTTCAGAGCCAAGAGTCAAGAGAACTGCAGTTAGACTCAAGATCGGCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAACTGTGGGCTGGACCCTCCCCCATTAATCACCAAGATCTTATGGAGGCATCTGATGCTGGGACACTaGCACACCCTATTATGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TNCGLDPPPLITKILWRHLMLGH*HTLLWD Trigger: ATCCCATAATAGGGTGTGCCAGTGTCCCAGCATCAG...ATGCCTCCATAAGATCTTGGTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGCTGGACCCTCCCCCATTAATCACCAAGATCTTATGGAGGCATATCCTCGTCTTAGGCAACCTCTaGGAAAGTCTTTTGACACCC | + |
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Preference number: 2 (lower is better) Translates to: CGLDPPPLITKILWRHILVLGNL*ESLLTP Trigger: GGGTGTCAAAAGACTTTCCCAGAGGTTGCCTAAGAC...GAGGATATGCCTCCATAAGATCTTGGTGATTAATGGGGGAGGGTCCAGCCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | GATCTCACACTAGCTAAATCTGATCTCAAATTCCCTACATGGCCCAGGCCGATCCCTATTATGGGATGTTaGGAATGGAAGCCAGGCCCG | + |
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Preference number: 2 (lower is better) Translates to: DLTLAKSDLKFPTWPRPIPIMGC*EWKPGP Trigger: CGGGCCTGGCTTCCATTCCCAACATCCCATAATAGG...GATCGGCCTGGGCCATGTAGGGAATTTGAGATCAGATTTAGCTAGTGTGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGCCGATCTTGAGTCTAACTGCAGTTCTCTTGACTCTTGGCTCTGAAATTCTCAAATTCCCTACATaGCCCAGGCCGATCTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: PRPILSLTAVLLTLGSEILKFPT*PRPILS Trigger: ACTCAAGATCGGCCTGGGCCATGTAGGGAATTTGAG...AATTTCAGAGCCAAGAGTCAAGAGAACTGCAGTTAGACTCAAGATCGGCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACACTAGCTAAATCTGATCTCAAATTCCCTACATGGCCCAGGCCGATCTTGGTCTTAGGCAACCTCTaGGAAAGTCTTTTGACACCC | + |
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Preference number: 2 (lower is better) Translates to: LTLAKSDLKFPTWPRPILVLGNL*ESLLTP Trigger: GGGTGTCAAAAGACTTTCCCAGAGGTTGCCTAAGAC...CAAGATCGGCCTGGGCCATGTAGGGAATTTGAGATCAGATTTAGCTAGTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACACTAGCTAAATCTGATCTCAAATTCCCTACATGGCCCAGGCCGATCTTGCTTGACTCTTGGCTCTaGAATTACAGATGTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LTLAKSDLKFPTWPRPILLDSWL*NYRCEP Trigger: AGGCTCACATCTGTAATTTCAGAGCCAAGAGTCAAG...CAAGATCGGCCTGGGCCATGTAGGGAATTTGAGATCAGATTTAGCTAGTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGAACCCATATTAATCTATAACTaGCCACTAATGACAGTCGCT | + |
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Preference number: 2 (lower is better) Translates to: LLTALLPIACSACLLIEPILIYN*PLMTVA Trigger: AGCGACTGTCATTAGTGGGCAGTTATAGATTAATAT...GGGTTCTATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGACCCTCCCCCATTAATCACCAAGATCTTATGGAGGCATATCCTCTCTTTTAGTCGATGGATTGTCTaGAAACCAAAGCCAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: LDPPPLITKILWRHILSFSRWIV*KPKPGP Trigger: TGGTCCTGGCTTTGGTTTGCAGACAATCCATCGACT...AAAAGAGAGGATATGCCTCCATAAGATCTTGGTGATTAATGGGGGAGGGTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144086.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCTGGGATACATAGTGAAACCTGTTTCCCAAGAAGAAACGTGCTGAAAGTATATCTCTGGAGCAACTaGAATGGCAGGCCTGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: QPGIHSETCFPRRNVLKVYLWSN*NGRPAM Trigger: CATTGCAGGCCTGCCATTCCAGTTGCTCCAGAGATA...TACTTTCAGCACGTTTCTTCTTGGGAAACAGGTTTCACTATGTATCCCAGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACCTGGGATACATAGTGAAACCTGTTTCCCAAGAAGAAACGTGCTGAAAGTAGTCTTTTGCAAGATGTaGGGCTTCATTTTGCACCAC | + |
|
Preference number: 2 (lower is better) Translates to: QPGIHSETCFPRRNVLKVVFCKM*GFILHH Trigger: GTGGTGCAAAATGAAGCCGCACATCTTGCAAAAGAC...TACTTTCAGCACGTTTCTTCTTGGGAAACAGGTTTCACTATGTATCCCAGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGGCCGATCTTGAGTCTAACTGCAGTTCTCTTGACTCTTGGCTCTGAAATTATATTAATCTATAACTaGCCACTAATGACAGTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: PRPILSLTAVLLTLGSEIILIYN*PLMTVA Trigger: AGCGACTGTCATTAGTGGGCAGTTATAGATTAATAT...AATTTCAGAGCCAAGAGTCAAGAGAACTGCAGTTAGACTCAAGATCGGCCTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR GCA 72 bp | GAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTaGTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EAGADAEAMEGC*LLPCSPSLAQP Trigger: AGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR GCA 72 bp | GAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTaGCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELMQRPWRGAAY*LAPHRLLSLPS Trigger: AGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGGCGTTCCTAAGGCACTaGGCTTTCTGCAAACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GHQPRMAPPAQDGTTNCGAFLRH*AFCKLG Trigger: ACCAAGTTTGCAGAAAGCCAAGTGCCTTAGGAACGC...CCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCCCCTATTATGGGATGTaGGGAATGGAAGCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LEAGADAEAMEGCCLLPCPYYGM*GMEARP Trigger: GGGCCTGGCTTCCATTCCCAACATCCCATAATAGGG...GCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGCGCGGTTTCTTTGCATTaGGGGATGGAAATAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: ATSLGWHHQPRMAPPTVGAVSLH*GMEIET Trigger: TGTCTCTATTTCCATCCCCAAATGCAAAGAAACCGC...GCCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR GCA 72 bp | CTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTaGCTTCTTATAGAACCCAGGGCCACCAGCCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLTALLPIACSA*LLIEPRATSLG Trigger: TCCTAGGCTGGTGGCCCTGGGTTCTATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCGTTCCTAAGGCACTaGGCTTTCTGCAAACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CRGHGGVLLTALLPIACSAFLRH*AFCKLG Trigger: ACCAAGTTTGCAGAAAGCCAAGTGCCTTAGGAACGC...TGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGGACACTGGCACACCCTATTATGGGATGTTGGGAATGGAAGCCAGGCCCCGCGGAGTCGATGGATaGTCTGCAAACCAAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CWDTGTPYYGMLGMEARPRGVDG*SANQSQ Trigger: CTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCG...GGGCCTGGCTTCCATTCCCAACATCCCATAATAGGGTGTGCCAGTGTCCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCGCGGTTTCTTTGCATTaGGGGATGGAAATAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LEAGADAEAMEGCCLLPCAVSLH*GMEIET Trigger: TGTCTCTATTTCCATCCCCAAATGCAAAGAAACCGC...GCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCACACCCTATTATGGGATGTTGGGAATGGAAGCCAGGCCCGGTTGCATGCGTAATCAGATCTTTTTaGTCCCTGCAACCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LAHPIMGCWEWKPGPVACVIRSF*SLQPPP Trigger: GGGTGGGGGTTGCAGGGACAAAAAAGATCTGATTAC...GCATGCAACCGGGCCTGGCTTCCATTCCCAACATCCCATAATAGGGTGTGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGTCATGGCCAACAGGTaGAGAAACACTTTCCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GVLLTALLPIACSACLLIVMANR*RNTFLG Trigger: CCCTAGGAAAGTGTTTCTCAACCTGTTGGCCATGAC...TATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAAATTACAGATGTGAGCCTCGGCTCGACTGCCCTGATGCTGGGACACTGGGCGTTCCTAAGGCACTaGGCTTTCTGCAAACTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SEITDVSLGSTALMLGHWAFLRH*AFCKLG Trigger: ACCAAGTTTGCAGAAAGCCAAGTGCCTTAGGAACGC...CCAGTGTCCCAGCATCAGGGCAGTCGAGCCGAGGCTCACATCTGTAATTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGGGACACTGGCACACCCTATTATGGGATGTTGGGAATGGAAGCCAGGCCTTTCTGCAAACTTGGTaGAGACTACAGCAGCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: MLGHWHTLLWDVGNGSQAFLQTW*RLQQQV Trigger: TACCTGCTGCTGTAGTCTCAACCAAGTTTGCAGAAA...GGCCTGGCTTCCATTCCCAACATCCCATAATAGGGTGTGCCAGTGTCCCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGCCGATCTTGAGTCTAACTGCAGTTCTCTTGACTCTTGGCTCTGAAATTCCCTATTATGGGATGTaGGGAATGGAAGCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PRPILSLTAVLLTLGSEIPYYGM*GMEARP Trigger: GGGCCTGGCTTCCATTCCCAACATCCCATAATAGGG...AATTTCAGAGCCAAGAGTCAAGAGAACTGCAGTTAGACTCAAGATCGGCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGCTGGAAATCGAACACCAGTCCTCAGAAAAGCAGCTGGTGCTCTTAACCACGTCATGGCCAACAGGTaGAGAAACACTTTCCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DAGNRTPVLRKAAGALNHVMANR*RNTFLG Trigger: CCCTAGGAAAGTGTTTCTCAACCTGTTGGCCATGAC...GTGGTTAAGAGCACCAGCTGCTTTTCTGAGGACTGGTGTTCGATTTCCAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR TCA 72 bp | CTTGAGTCTAACTGCAGTTCTCTTGACTCTTGGCTCTaGAATTACAGATGTGAGCCTCGGCTCGACTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LESNCSSLDSWL*NYRCEPRLDCP Trigger: AGGGCAGTCGAGCCGAGGCTCACATCTGTAATTTCAGAGCCAAGAGTCAAGAGAACTGCAGTTAGACTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR TCA 72 bp | CCAGTCCTCAGAAAAGCAGCTGGTGCTCTTAACCACTaGGGTGTTTCCTCAATCGAGGTTCCCTCTCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PVLRKAAGALNH*GVSSIEVPSLR Trigger: TCTAAGAGAGGGAACCTCGATTGAGGAAACACCTCAGTGGTTAAGAGCACCAGCTGCTTTTCTGAGGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAACCACTGAGGTGTTTCCTCAATCGAGGTTCCCTCTCTTAGATGACACCAGCGTAATCAGATCTTTTTaGTCCCTGCAACCCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: LTTEVFPQSRFPLLDDTSVIRSF*SLQPPP Trigger: GGGTGGGGGTTGCAGGGACAAAAAAGATCTGATTAC...GCTGGTGTCATCTAAGAGAGGGAACCTCGATTGAGGAAACACCTCAGTGGTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR-3UTR CAA 90 bp | TTAACCACTGAGGTGTTTCCTCAATCGAGGTTCCCTCTCTTAGATGACACCAGCGCCAGCGCGGTTTCTTaGCATTTGGGGATGGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: LTTEVFPQSRFPLLDDTSASAVS*HLGMEI Trigger: TATTTCCATCCCCAAATGCAAAGAAACCGCGCTGGC...GCTGGTGTCATCTAAGAGAGGGAACCTCGATTGAGGAAACACCTCAGTGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCTTTGCTGTAGAGTCTCAGTCCATTTCAAACCTTAAGGCATGGGAGGAGTGGCTTTCTGCAAACTaGGTTGAGACTACAGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSFAVESQSISNLKAWEEWLSAN*VETTAA Trigger: TGCTGCTGTAGTCTCAACCAAGTTTGCAGAAAGCCA...CTCCTCCCATGCCTTAAGGTTTGAAATGGACTGAGACTCTACAGCAAAGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR TCA 72 bp | TGGAGCAACTGGAATGGCAGGCCTGCAATGTCATCATaGGTTGTCTTTTGCAAGATGTGCGGCTTCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WSNWNGRPAMSS*VVFCKMCGFIL Trigger: CAAAATGAAGCCGCACATCTTGCAAAAGACAACTCATGATGACATTGCAGGCCTGCCATTCCAGTTGCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACCCTCCCCCATTAATCACCAAGATCTTATGGAGGCATATCCTCTCTTTTTTTCTGCAAACTTGGTaGAGACTACAGCAGCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LDPPPLITKILWRHILSFFLQTW*RLQQQV Trigger: TACCTGCTGCTGTAGTCTCAACCAAGTTTGCAGAAA...AAAAGAGAGGATATGCCTCCATAAGATCTTGGTGATTAATGGGGGAGGGTCCAG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR GCA 72 bp | CATGAGTTGTCTTTTGCAAGATGTGCGGCTTCATTTTaGACCACGGCTTCTGATTCAGTTAGGGTTTCTATT | + |
|
Preference number: 3 (lower is better) Translates to: HELSFARCAASF*TTASDSVRVSI Trigger: AATAGAAACCCTAACTGAATCAGAAGCCGTGGTGCAAAATGAAGCCGCACATCTTGCAAAAGACAACTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| 3UTR GCA 72 bp | AGTATTTTATCTCTGGAGCAACTGGAATGGCAGGCCTaGAATGTCATCATGAGTTGTCTTTTGCAAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SILSLEQLEWQA*NVIMSCLLQDV Trigger: CACATCTTGCAAAAGACAACTCATGATGACATTGCAGGCCTGCCATTCCAGTTGCTCCAGAGATAAAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
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| 3UTR TCA 72 bp | GCGGTTTCTTTGCATTTGGGGATGGAAATAGAGACATaGAAGCAAAGTCTCCGCATCACTAATGACACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: AVSLHLGMEIET*KQSLRITNDTK Trigger: TTTAGTGTCATTAGTGATGCGGAGACTTTGCTTTCATGTCTCTATTTCCATCCCCAAATGCAAAGAAACCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR TCA 72 bp | ATTTCAAACCTTAAGGCATGGGAGGAGTCTCTAACCTaGGGCTATACACAAGTATATACAGAGATAGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: ISNLKAWEESLT*GYTQVYTEIGI Trigger: TATCCCTATCTCTGTATATACTTGTGTATAGCCTCAGGTTAGAGACTCCTCCCATGCCTTAAGGTTTGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| 3UTR TCA 72 bp | TACATAGTGAAACCTGTTTCCCAAGAAGAAACGTGCTaGAAGTATTTTATCTCTGGAGCAACTGGAATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YIVKPVSQEETC*KYFISGATGMA Trigger: TGCCATTCCAGTTGCTCCAGAGATAAAATACTTTCAGCACGTTTCTTCTTGGGAAACAGGTTTCACTATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGATACATAGTGAAACCTGTTTCCCAAGAAGAAACGTGCTGAAAGTATTTTATCAATGTCATCATGAGTaGTCTTTTGCAAGATGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: GIHSETCFPRRNVLKVFYQCHHE*SFARCA Trigger: CGCACATCTTGCAAAAGACAACTCATGATGACATTG...ATAAAATACTTTCAGCACGTTTCTTCTTGGGAAACAGGTTTCACTATGTATCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| CDS-3UTR TCA 90 bp | GCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGCGTGCCCCGCGGCCTCTaGTCTGTCGCTGGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATSLGWHHQPRMAPPTVGVPRGL*SVAGPG Trigger: CCCAGGCCCAGCGACAGATCAGAGGCCGCGGGGCAC...GCCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGTGCCCCGCGGCCTCTaGTCTGTCGCTGGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRGHGGVLLTALLPIACSVPRGL*SVAGPG Trigger: CCCAGGCCCAGCGACAGATCAGAGGCCGCGGGGCAC...TGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR TCA 90 bp | GGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGTGCCCCGCGGCCTCTaGTCTGTCGCTGGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVLLTALLPIACSACLLIVPRGL*SVAGPG Trigger: CCCAGGCCCAGCGACAGATCAGAGGCCGCGGGGCAC...TATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR GCA 90 bp | GCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTCGATGGATTGTCTCTaGCCTCCAGCCCAGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AMEGCCLLPCSPSLAQPASMDCL*PPAQAP Trigger: CGGGGCCTGGGCTGGAGGGCAGAGACAATCCATCGA...GGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016094.13 |
||
| CDS-3UTR CCA 90 bp | GGCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGATCTGTCGCTGGGCCTaGGTTATCTCCTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHQPRMAPPAQDGTTNCGICRWA*VISSPA Trigger: GGCTGGGGAGGAGATAACCCAGGCCCAGCGACAGAT...CCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS-3UTR CCA 90 bp | GCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGCGACGCGCGGAGTCGATaGATTGTCTCTGCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATSLGWHHQPRMAPPTVGDARSR*IVSALQ Trigger: CTGGAGGGCAGAGACAATCCATCGACTCCGCGCGTC...GCCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016094.13 |
||
| CDS-3UTR TCA 90 bp | GGCCACCAGCCTAGGATGGCACCACCAGCCCAGGATGGCACCACCAACTGTGGGCCGGGAGGTGTGGGATaGCTCTGTTCTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHQPRMAPPAQDGTTNCGPGGVG*LCSLCG Trigger: TCCACACAGAGAACAGAGTCATCCCACACCTCCCGG...CCCACAGTTGGTGGTGCCATCCTGGGCTGGTGGTGCCATCCTAGGCTGGTGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR CCA 90 bp | GCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCATCTGTCGCTGGGCCTaGGTTATCTCCTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AMEGCCLLPCSPSLAQPAICRWA*VISSPA Trigger: GGCTGGGGAGGAGATAACCCAGGCCCAGCGACAGAT...GGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACGCCCATCAAACCACCTaGGTGCCGGGAGGTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSPGWHHQLWAGPSPINHAHQTT*VPGGVG Trigger: TCCCACACCTCCCGGCACCCAGGTGGTTTGATGGGC...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR TCA 90 bp | CCGTCTAGGGCCGCTGCTTCTCACACAGCGGACGTCAGCTTCCGTTTGGTGCTCCCGGGAGGTGTGGGATaGCTCTGTTCTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSRAAASHTADVSFRLVLPGGVG*LCSLCG Trigger: TCCACACAGAGAACAGAGTCATCCCACACCTCCCGG...GAGCACCAAACGGAAGCTGACGTCCGCTGTGTGAGAAGCAGCGGCCCTAGACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144086.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACATCTGTCGCTGGGCCTaGGTTATCTCCTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSPGWHHQLWAGPSPINHICRWA*VISSPA Trigger: GGCTGGGGAGGAGATAACCCAGGCCCAGCGACAGAT...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACGGGTGCCGGGAGGTGTaGGATGACTCTGTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TSPGWHHQLWAGPSPINHGCREV*DDSVLC Trigger: ACAGAGAACAGAGTCATCCCACACCTCCCGGCACCC...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| 3UTR CAA 72 bp | ACCGCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATaGTCTGCAAACCAAAGCCAGGACCATCAGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TAGCGLTRGVDG*SANQSQDHQKP Trigger: GGGCTTCTGATGGTCCTGGCTTTGGTTTGCAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144086.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTGCAAGATGTGCGGCTTCATTTTGCACCACGGCTTCTGATTCAGTTAGGGGTGCCCCGCGGCCTCTaGTCTGTCGCTGGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQDVRLHFAPRLLIQLGVPRGL*SVAGPG Trigger: CCCAGGCCCAGCGACAGATCAGAGGCCGCGGGGCAC...CCCTAACTGAATCAGAAGCCGTGGTGCAAAATGAAGCCGCACATCTTGCAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
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| CDS-3UTR GCA 90 bp | GCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTCCTCCCCAGCCTTCTaGAGATACATGGATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AMEGCCLLPCSPSLAQPASSPAF*RYMDGK Trigger: TTTCCCATCCATGTATCTGCAGAAGGCTGGGGAGGA...GGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS-3UTR GCA 90 bp | GACACTGGCACACCCTATTATGGGATGTTGGGAATGGAAGCCAGGCCCGGTTGCCTAAGAACTTACCTCTaGCCTCCAGCCCAGGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DTGTPYYGMLGMEARPGCLRTYL*PPAQAP Trigger: CGGGGCCTGGGCTGGAGGGCAGAGGTAAGTTCTTAG...GCAACCGGGCCTGGCTTCCATTCCCAACATCCCATAATAGGGTGTGCCAGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144086.2 |
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| CDS-3UTR CCA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACTCGCCTGGCTGTCAGTaGGCAGTTTCAGGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSPGWHHQLWAGPSPINHSPGCQ*AVSGHQ Trigger: CTGATGACCTGAAACTGCCCACTGACAGCCAGGCGA...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS-3UTR CCA 90 bp | CTGGCACACCCTATTATGGGATGTTGGGAATGGAAGCCAGGCCCGGTTGCATGCGGGTGCCGGGAGGTGTaGGATGACTCTGTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LAHPIMGCWEWKPGPVACGCREV*DDSVLC Trigger: ACAGAGAACAGAGTCATCCCACACCTCCCGGCACCC...GCATGCAACCGGGCCTGGCTTCCATTCCCAACATCCCATAATAGGGTGTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACTCCTCCCCAGCCTTCTaGAGATACATGGATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSPGWHHQLWAGPSPINHSSPAF*RYMDGK Trigger: TTTCCCATCCATGTATCTGCAGAAGGCTGGGGAGGA...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS-3UTR CCA 90 bp | ACCAACTGTGGGCTGGACCCTCCCCCATTAATCACCAAGATCTTATGGAGGCATGGGTGCCGGGAGGTGTaGGATGACTCTGTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TNCGLDPPPLITKILWRHGCREV*DDSVLC Trigger: ACAGAGAACAGAGTCATCCCACACCTCCCGGCACCC...ATGCCTCCATAAGATCTTGGTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATAGAACCCCCAGGAGCTTATGAATaGCCTCAATGGCTTCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTALLPIACSACLLIEPPGAYE*PQWLHP Trigger: AGGGTGAAGCCATTGAGGTCATTCATAAGCTCCTGG...GGGTTCTATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR TCA 90 bp | TTAACCACTGAGGTGTTTCCTCAATCGAGGTTCCCTCTCTTAGATGACACCAGCCCGGGAGGTGTGGGATaGCTCTGTTCTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTTEVFPQSRFPLLDDTSPGGVG*LCSLCG Trigger: TCCACACAGAGAACAGAGTCATCCCACACCTCCCGG...GCTGGTGTCATCTAAGAGAGGGAACCTCGATTGAGGAAACACCTCAGTGGTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAGATTAACCCAGTCCTGTCCTTTGCTGTAGAGTCTCAGTCCATTTCAAACTCGCCTGGCTGTCAGTaGGCAGTTTCAGGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEINPVLSFAVESQSISNSPGCQ*AVSGHQ Trigger: CTGATGACCTGAAACTGCCCACTGACAGCCAGGCGA...GTTTGAAATGGACTGAGACTCTACAGCAAAGGACAGGACTGGGTTAATCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS-3UTR CCA 90 bp | CTGGACCCTCCCCCATTAATCACCAAGATCTTATGGAGGCATATCCTCTCTTTTTCGCCTGGCTGTCAGTaGGCAGTTTCAGGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDPPPLITKILWRHILSFSPGCQ*AVSGHQ Trigger: CTGATGACCTGAAACTGCCCACTGACAGCCAGGCGA...AAAAGAGAGGATATGCCTCCATAAGATCTTGGTGATTAATGGGGGAGGGTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS-3UTR TCA 90 bp | CAACCTGGGATACATAGTGAAACCTGTTTCCCAAGAAGAAACGTGCTGAAAGTACCGGGAGGTGTGGGATaGCTCTGTTCTCTGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPGIHSETCFPRRNVLKVPGGVG*LCSLCG Trigger: TCCACACAGAGAACAGAGTCATCCCACACCTCCCGG...TACTTTCAGCACGTTTCTTCTTGGGAAACAGGTTTCACTATGTATCCCAGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTATTGCTGAGATAAAACACCATGATCCAAAGCAAGCTGAGGCTATACACATCTGTCGCTGGGCCTaGGTTATCTCCTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSIAEIKHHDPKQAEAIHICRWA*VISSPA Trigger: GGCTGGGGAGGAGATAACCCAGGCCCAGCGACAGAT...GTGTATAGCCTCAGCTTGCTTTGGATCATGGTGTTTTATCTCAGCAATAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGATTAACCCAGTCCTGTCCTTTGCTGTAGAGTCTCAGTCCATTTCAAACTCCTCCCCAGCCTTCTaGAGATACATGGATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VEINPVLSFAVESQSISNSSPAF*RYMDGK Trigger: TTTCCCATCCATGTATCTGCAGAAGGCTGGGGAGGA...GTTTGAAATGGACTGAGACTCTACAGCAAAGGACAGGACTGGGTTAATCTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTGAGATAAAACACCATGATCCAAAGCAAGCTGAGGCTATACACAAGTATGGGTGCCGGGAGGTGTaGGATGACTCTGTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IAEIKHHDPKQAEAIHKYGCREV*DDSVLC Trigger: ACAGAGAACAGAGTCATCCCACACCTCCCGGCACCC...ATACTTGTGTATAGCCTCAGCTTGCTTTGGATCATGGTGTTTTATCTCAGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| CDS-3UTR CCA 90 bp | AACCTGTTTCCCAAGAAGAAACGTGCTGAAAGTATTTTATCTCTGGAGCAACTGTCGCCTGGCTGTCAGTaGGCAGTTTCAGGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLFPKKKRAESILSLEQLSPGCQ*AVSGHQ Trigger: CTGATGACCTGAAACTGCCCACTGACAGCCAGGCGA...CAGTTGCTCCAGAGATAAAATACTTTCAGCACGTTTCTTCTTGGGAAACAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
||
| CDS-3UTR GCA 90 bp | AACCTGTTTCCCAAGAAGAAACGTGCTGAAAGTATTTTATCTCTGGAGCAACTGTCCTCCCCAGCCTTCTaGAGATACATGGATGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLFPKKKRAESILSLEQLSSPAF*RYMDGK Trigger: TTTCCCATCCATGTATCTGCAGAAGGCTGGGGAGGA...CAGTTGCTCCAGAGATAAAATACTTTCAGCACGTTTCTTCTTGGGAAACAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
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| CDS GCA 90 bp | GCCCAGGCCCCGGCCCGCCCTGGCGCTCACCCTTTGTGCCATCCGTaGTCAGCGGCCCGGGTCGCCCCGGGCGTCTGCGCTGCTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AQAPARPGAHPLCHP*SAARVAPGVCAAAG Trigger: TCCTGCAGCAGCGCAGACGCCCGGGGCGACCCGGGCCGCTGAGCACGGATGGCACAAAGGGTGAGCGCCAGGGCGGGCCGGGGCCTGGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016094.13 ENSMUST00000144086.2 |
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| CDS CCA 90 bp | GGGTCGCGGAGGCACCGCGGGCTGTGGTTTGACGCGCGGAGTCGATaGATTGTCTCTGCCCTCCAGCCCAGGCCCCGGCCCGCCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSRRHRGLWFDARSR*IVSALQPRPRPALA Trigger: CGCCAGGGCGGGCCGGGGCCTGGGCTGGAGGGCAGAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCGGTGCCTCCGCGACCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016094.13 |
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| CDS CCA 90 bp | GTCGATGGATTGTCTCTGCCCTCCAGCCCAGGCCCCGGCCCGCCCTaGCGCTCACCCTTTGTGCCATCCGTGCTCAGCGGCCCGGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: VDGLSLPSSPGPGPP*RSPFVPSVLSGPGR Trigger: GCGACCCGGGCCGCTGAGCACGGATGGCACAAAGGGTGAGCGCCAGGGCGGGCCGGGGCCTGGGCTGGAGGGCAGAGACAATCCATCGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016094.13 |
||
| CDS CCA 90 bp | CCTAAGAACTTACCTCTGCCCTCCAGCCCAGGCCCCGGCCCGCCCTaGCGCTCACCCTTTGTGCCATCCGTGCTCAGCGGCCCGGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PKNLPLPSSPGPGPP*RSPFVPSVLSGPGR Trigger: GCGACCCGGGCCGCTGAGCACGGATGGCACAAAGGGTGAGCGCCAGGGCGGGCCGGGGCCTGGGCTGGAGGGCAGAGGTAAGTTCTTAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144086.2 |
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| CDS-3UTR CAA 90 bp | AGGCAGGAGCTGATGCAGAGGCCATGGAGGGGTGCTGCTTACTGCCTTGCTCCCCGCGGAGTCGATGGATaGTCTCTGCCCTCCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RQELMQRPWRGAAYCLAPRGVDG*SLPSSP Trigger: TGGGCTGGAGGGCAGAGACAATCCATCGACTCCGCG...GGGAGCAAGGCAGTAAGCAGCACCCCTCCATGGCCTCTGCATCAGCTCCTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016094.13 |
||
| CDS TCA 90 bp | CGGCTCGTTGCCCATCAAACCACCTGGGTGCCGGGAGGTGTGGGATaGCTCTGTTCTCTGTGTGGATCTCGCCGGCCTCAATGGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RLVAHQTTWVPGGVG*LCSLCGSRRPQWGT Trigger: TGTTCCCCATTGAGGCCGGCGAGATCCACACAGAGAACAGAGTCATCCCACACCTCCCGGCACCCAGGTGGTTTGATGGGCAACGAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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| CDS CCA 90 bp | GACCTTCGAGGTGGTGCCCCGCGGCCTCTGATCTGTCGCTGGGCCTaGGTTATCTCCTCCCCAGCCTTCTGCAGATACATGGATGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLRGGAPRPLICRWA*VISSPAFCRYMDGK Trigger: TTTCCCATCCATGTATCTGCAGAAGGCTGGGGAGGAGATAACCCAGGCCCAGCGACAGATCAGAGGCCGCGGGGCACCACCTCGAAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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| CDS CCA 90 bp | ATGGTCGACCTTCGAGGTGGTGCCCCGCGGCCTCTGATCTGTCGCTaGGCCTGGGTTATCTCCTCCCCAGCCTTCTGCAGATACATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: MVDLRGGAPRPLICR*AWVISSPAFCRYMD Trigger: ATCCATGTATCTGCAGAAGGCTGGGGAGGAGATAACCCAGGCCCAGCGACAGATCAGAGGCCGCGGGGCACCACCTCGAAGGTCGACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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| CDS-3UTR CAA 90 bp | ACCAGCCCAGGATGGCACCACCAACTGTGGGCTGGACCCTCCCCCATTAATCACACTCTCAGCGGCTCGTaGCCCATCAAACCACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSPGWHHQLWAGPSPINHTLSGS*PIKPPG Trigger: CCCAGGTGGTTTGATGGGCAACGAGCCGCTGAGAGT...GTGATTAATGGGGGAGGGTCCAGCCCACAGTTGGTGGTGCCATCCTGGGCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS GCA 90 bp | TTGAAGTATTCAGTGAGAGTGCCCTGGCGACTCTCAGCGGCTCGTTaGCCATCAAACCACCTGGGTGCCGGGAGGTGTGGGATGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKYSVRVPWRLSAAR*PSNHLGAGRCGMTL Trigger: CAGAGTCATCCCACACCTCCCGGCACCCAGGTGGTTTGATGGGCAACGAGCCGCTGAGAGTCGCCAGGGCACTCTCACTGAATACTTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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| CDS GCA 90 bp | CGGATCCTCCGCCTCGTCGGGACTGTCAAGGGGCTCCAGATAGGATaGAGGGACCCAACCTCGCTTTGTCTTCATCTGGCAAAACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RILRLVGTVKGLQIG*RDPTSLCLHLAKPP Trigger: TGGTGGTTTTGCCAGATGAAGACAAAGCGAGGTTGGGTCCCTGCATCCTATCTGGAGCCCCTTGACAGTCCCGACGAGGCGGAGGATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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| CDS-3UTR CAA 90 bp | CTGGCACACCCTATTATGGGATGTTGGGAATGGAAGCCAGGCCCGGTTGCATGCACTCTCAGCGGCTCGTaGCCCATCAAACCACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LAHPIMGCWEWKPGPVACTLSGS*PIKPPG Trigger: CCCAGGTGGTTTGATGGGCAACGAGCCGCTGAGAGT...GCATGCAACCGGGCCTGGCTTCCATTCCCAACATCCCATAATAGGGTGTGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS CCA 90 bp | CTGGGCCTGGGTTATCTCCTCCCCAGCCTTCTGCAGATACATGGATaGGAAATAGCCGGTGATATCCCCTTTCCTGACCACCCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLGYLLPSLLQIHG*EIAGDIPFPDHPPA Trigger: GGCTGGTGGGTGGTCAGGAAAGGGGATATCACCGGCTATTTCCCATCCATGTATCTGCAGAAGGCTGGGGAGGAGATAACCCAGGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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| CDS-3UTR CAA 90 bp | GGGGTGCTGCTTACTGCCTTGCTCCCCATCGCTTGCTCAGCCTGCCTTCTTATATCAGCTACGTTATTCTaGCCATCTTTGGGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVLLTALLPIACSACLLISATLF*PSLGTR Trigger: CCTGGTGCCCAAAGATGGCAAGAATAACGTAGCTGA...TATAAGAAGGCAGGCTGAGCAAGCGATGGGGAGCAAGGCAGTAAGCAGCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS-3UTR CAA 90 bp | CAACCTGGGATACATAGTGAAACCTGTTTCCCAAGAAGAAACGTGCTGAAAGTAACTCTCAGCGGCTCGTaGCCCATCAAACCACCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QPGIHSETCFPRRNVLKVTLSGS*PIKPPG Trigger: CCCAGGTGGTTTGATGGGCAACGAGCCGCTGAGAGT...TACTTTCAGCACGTTTCTTCTTGGGAAACAGGTTTCACTATGTATCCCAGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146354.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGCCGATCTTGAGTCTAACTGCAGTTCTCTTGACTCTTGGCTCTGAAATTTCAGCTACGTTATTCTaGCCATCTTTGGGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRPILSLTAVLLTLGSEISATLF*PSLGTR Trigger: CCTGGTGCCCAAAGATGGCAAGAATAACGTAGCTGA...AATTTCAGAGCCAAGAGTCAAGAGAACTGCAGTTAGACTCAAGATCGGCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 |
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| CDS CAA 90 bp | CTCTGCCCTCCAGCCCAGGCCCCGGCCCGCCCTGGCGCTCACCCTTaGTGCCATCCGTGCTCAGCGGCCCGGGTCGCCCCGGGCGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LCPPAQAPARPGAHP*CHPCSAARVAPGVC Trigger: GCAGACGCCCGGGGCGACCCGGGCCGCTGAGCACGGATGGCACAAAGGGTGAGCGCCAGGGCGGGCCGGGGCCTGGGCTGGAGGGCAGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016094.13 ENSMUST00000144086.2 |
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| CDS CAA 90 bp | CGCGGAGGCACCGCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATaGTCTCTGCCCTCCAGCCCAGGCCCCGGCCCGCCCTGGCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RGGTAGCGLTRGVDG*SLPSSPGPGPPWRS Trigger: TGAGCGCCAGGGCGGGCCGGGGCCTGGGCTGGAGGGCAGAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCGGTGCCTCCGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016094.13 |
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| CDS CAA 72 bp | ACCGCGGGCTGTGGTTTGACGCGCGGAGTCGATGGATaGTCTCTGCCCTCCAGCCCAGGCCCCGGCCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TAGCGLTRGVDG*SLPSSPGPGPP Trigger: GGGCGGGCCGGGGCCTGGGCTGGAGGGCAGAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016094.13 |
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| CDS GCA 72 bp | TCTCGTCCCGCCCCTGGAACCCTAAGAACTTACCTCTaGCCTCCAGCCCAGGCCCCGGCCCGCCCTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRPAPGTLRTYL*PPAQAPARPGA Trigger: AGCGCCAGGGCGGGCCGGGGCCTGGGCTGGAGGGCAGAGGTAAGTTCTTAGGGTTCCAGGGGCGGGACGAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144086.2 |
||
| CDS CCA 72 bp | AGGCACCGCGGGCTGTGGTTTGACGCGCGGAGTCGATaGATTGTCTCTGCCCTCCAGCCCAGGCCCCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RHRGLWFDARSR*IVSALQPRPRP Trigger: GGGCCGGGGCCTGGGCTGGAGGGCAGAGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCGGTGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016094.13 |
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| CDS TCA 72 bp | GGATGGTCGACCTTCGAGGTGGTGCCCCGCGGCCTCTaGTCTGTCGCTGGGCCTGGGTTATCTCCTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GWSTFEVVPRGL*SVAGPGLSPPQ Trigger: CTGGGGAGGAGATAACCCAGGCCCAGCGACAGATCAGAGGCCGCGGGGCACCACCTCGAAGGTCGACCATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
||
| CDS CCA 72 bp | CTTCGAGGTGGTGCCCCGCGGCCTCTGATCTGTCGCTaGGCCTGGGTTATCTCCTCCCCAGCCTTCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRGGAPRPLICR*AWVISSPAFCR Trigger: TCTGCAGAAGGCTGGGGAGGAGATAACCCAGGCCCAGCGACAGATCAGAGGCCGCGGGGCACCACCTCGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
||
| CDS CCA 72 bp | AGGCACCGCGGGCTGTGGTTTGACGCGCGGAGTCGATaGATTGTCCTTTGTGCCATCCGTGCTCAGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RHRGLWFDARSR*IVLCAIRAQRP Trigger: GGGCCGCTGAGCACGGATGGCACAAAGGACAATCCATCGACTCCGCGCGTCAAACCACAGCCCGCGGTGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111275.8 ENSMUST00000146354.8 |
||
| CDS TCA 72 bp | GCCCATCAAACCACCTGGGTGCCGGGAGGTGTGGGATaGCTCTGTTCTCTGTGTGGATCTCGCCGGCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: AHQTTWVPGGVG*LCSLCGSRRPQ Trigger: TTGAGGCCGGCGAGATCCACACAGAGAACAGAGTCATCCCACACCTCCCGGCACCCAGGTGGTTTGATGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
||
| CDS GCA 72 bp | CGCCTCGTCGGGACTGTCAAGGGGCTCCAGATAGGATaGAGGGACCCAACCTCGCTTTGTCTTCATCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLVGTVKGLQIG*RDPTSLCLHLA Trigger: TGCCAGATGAAGACAAAGCGAGGTTGGGTCCCTGCATCCTATCTGGAGCCCCTTGACAGTCCCGACGAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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| CDS CAA 90 bp | GTTGAAGTATTCAGTGAGAGTGCCCTGGCGACTCTCAGCGGCTCGTaGCCCATCAAACCACCTGGGTGCCGGGAGGTGTGGGATGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: VEVFSESALATLSGS*PIKPPGCREVWDDS Trigger: AGAGTCATCCCACACCTCCCGGCACCCAGGTGGTTTGATGGGCAACGAGCCGCTGAGAGTCGCCAGGGCACTCTCACTGAATACTTCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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| CDS CCA 72 bp | TCTTTGGGCACCAGGTATGTCTCAGGCTTCTTCGCCTaGCTGTCAGTGGGCAGTTTCAGGTCATCAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SLGTRYVSGFFA*LSVGSFRSSGR Trigger: GCGGCCTGATGACCTGAAACTGCCCACTGACAGCCAGGCGAAGAAGCCTGAGACATACCTGGTGCCCAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016094.13 ENSMUST00000111275.8 ENSMUST00000144086.2 ENSMUST00000146354.8 |
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