Pregenerated sensors for NCDN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028833Ensembl transcript IDs: ENSMUST00000030637.14, ENSMUST00000106116.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTaGCAGCCCGCTCCTACCCTGGGACCTCCCTCCTATCAGGGAGCC | + |
Preference number: 1 (lower is better) Translates to: PRPGRQGTWAEAVSA*QPAPTLGPPSYQGA Trigger: GGCTCCCTGATAGGAGGGAGGTCCCAGGGTAGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR CCA 90 bp | GCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGCTCCTACCCTaGGACCTCCCTCCTATCAGGGAGCCAGACACTGGGTATAATGAC | + |
Preference number: 1 (lower is better) Translates to: AHGLRQSAPASPLLP*DLPPIREPDTGYND Trigger: GTCATTATACCCAGTGTCTGGCTCCCTGATAGGAGGGAGGTCCCAGGGTAGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR GCA 90 bp | GCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATaGCCTAGCCCTCAGAAAAGCCAGAAAGCTGGGGTGTTTGTGGGG | + |
Preference number: 1 (lower is better) Translates to: AGGRMQFLILERWAP*PSPQKSQKAGVFVG Trigger: CCCCACAAACACCCCAGCTTTCTGGCTTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR CCA 90 bp | CCCATCTTCACTCTGCTGCAACATGACACAAAAGCTCAAGAGACCTaGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGGTGGAA | + |
Preference number: 1 (lower is better) Translates to: PIFTLLQHDTKAQET*DQGLSGPLKEAQVE Trigger: TTCCACCTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTTTGTGTCATGTTGCAGCAGAGTGAAGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR CCA 90 bp | CCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCCTGCCCCAAGGGGGCTaGAGGCAGGATGCAGTTTCT | + |
Preference number: 2 (lower is better) Translates to: PRPGRQGTWAEAVSACQPLPQGG*RQDAVS Trigger: AGAAACTGCATCCTGCCTCCAGCCCCCTTGGGGCAG...GGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR GCA 90 bp | CAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGCTCCTACCCTGGGAGAGAGGTGGGCACCATaGCCTAGCCCTCAGAAAAGC | + |
Preference number: 2 (lower is better) Translates to: QGTWAEAVSACQPAPTLGERWAP*PSPQKS Trigger: GCTTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTC...TCCCAGGGTAGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR CCA 90 bp | GGAGGGGAGCTGAAGCCAGGCACCACGGTGGCAGTGGAGTGCAATCACAGGGAACAACCTTCCCCGGCCTaGCGGGGCCAACCTCTGTTC | + |
Preference number: 2 (lower is better) Translates to: GGELKPGTTVAVECNHREQPSPA*RGQPLF Trigger: GAACAGAGGTTGGCCCCGCCAGGCCGGGGAAGGTTG...TTCCCTGTGATTGCACTCCACTGCCACCGTGGTGCCTGGCTTCAGCTCCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR CCA 90 bp | GGAGGGGAGCTGAAGCCAGGCACCACGGTGGCAGTGGAGTGCAATCACAGGGAATCCAGCCAGGCCAGATaGCACCAGGGGCACAGGGAT | + |
Preference number: 2 (lower is better) Translates to: GGELKPGTTVAVECNHRESSQAR*HQGHRD Trigger: ATCCCTGTGCCCCTGGTGCCATCTGGCCTGGCTGGA...TTCCCTGTGATTGCACTCCACTGCCACCGTGGTGCCTGGCTTCAGCTCCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR GCA 90 bp | AAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGGGGAGCCAGAAGGGGCTTCAGGGAAGATaGCTCCTCCCTCCTTCCCTC | + |
Preference number: 2 (lower is better) Translates to: KSQAANLKGADLTWGSQKGLQGR*LLPPSL Trigger: GAGGGAAGGAGGGAGGAGGCATCTTCCCTGAAGCCC...CTTCTGGCTCCCCCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR GCA 90 bp | AGGACCAAAGGCAAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGTTCCAAGCCAATCCCTaGCCCAAGGGGGCTGGAGGC | + |
Preference number: 2 (lower is better) Translates to: RTKGKSQAANLKGADLTWFQANP*PKGAGG Trigger: GCCTCCAGCCCCCTTGGGGCAGGGATTGGCTTGGAA...CCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTTGCCTTTGGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR TCA 90 bp | GGGGCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTGTGTTTGTGGGGGTCTaGAGAAGGGGTCCAGTTTGG | + |
Preference number: 2 (lower is better) Translates to: GAGGRMQFLILERWAPCPVFVGV*RRGPVW Trigger: CCAAACTGGACCCCTTCTTCAGACCCCCACAAACAC...AGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR TCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGGCAGTTTCTTATACTTaGGAGGTGGGCACCATGCCC | + |
Preference number: 2 (lower is better) Translates to: KAQETWDQGLSGPLKEAQAVSYT*EVGTMP Trigger: GGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGC...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR CCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGTGCTCCAAATTGCCCTaGAAGCATAGGGGCAACTCG | + |
Preference number: 2 (lower is better) Translates to: KAQETWDQGLSGPLKEAQCSKLP*KHRGNS Trigger: CGAGTTGCCCCTATGCTTCCAGGGCAATTTGGAGCA...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR GCA 90 bp | GTGGCAGTGGAGTGCAATCACAGGGAAACCATGCGGATTCTAGGGTGGGGTGACATAATGACACTTAGTTaGCCTCCTCCTGGGGGCTTC | + |
Preference number: 2 (lower is better) Translates to: VAVECNHRETMRILGWGDIMTLS*PPPGGF Trigger: GAAGCCCCCAGGAGGAGGGCAACTAAGTGTCATTAT...GTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR GCA 90 bp | TGTGATGTCAATGGCCTGAGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAAAGGGGCTGGAGGCAGGATaGAGTTTCTTATACTTGAGA | + |
Preference number: 2 (lower is better) Translates to: CDVNGLSLLSVQEDQRQKGLEAG*SFLYLR Trigger: TCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCC...CTTTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR CCA 72 bp | GCCTTGGGGAGGCCACGCCCTGGCCGGCAGGGCACATaGGCTGAGGCAGTCAGCGCCTGCCAGCCCGCTCCT | + |
Preference number: 3 (lower is better) Translates to: ALGRPRPGRQGT*AEAVSACQPAP Trigger: AGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGGCCTCCCCAAGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR GCA 72 bp | GGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTaGCAGCCCGCTCCTACCCTGGGACCTCCCTCCTAT | + |
Preference number: 3 (lower is better) Translates to: GRQGTWAEAVSA*QPAPTLGPPSY Trigger: ATAGGAGGGAGGTCCCAGGGTAGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR TCA 72 bp | CCAGCCAGGCCAGATGGCACCAGGGGCACAGGGATCTaGTGCTCAGGTGTCCAAGCAGGGATAAGGACAAGC | + |
Preference number: 3 (lower is better) Translates to: PARPDGTRGTGI*CSGVQAGIRTS Trigger: GCTTGTCCTTATCCCTGCTTGGACACCTGAGCATCAGATCCCTGTGCCCCTGGTGCCATCTGGCCTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR GCA 72 bp | GGGGAGCTGAAGCCAGGCACCACGGTGGCAGTGGAGTaGAATCACAGGGAAACCATGCGGATTCTAGGGTGG | + |
Preference number: 3 (lower is better) Translates to: GELKPGTTVAVE*NHRETMRILGW Trigger: CCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCCACCGTGGTGCCTGGCTTCAGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR CAA 90 bp | AACCTCTGTTCCAAGCCAATCCCTGCCCCAAGGGGGCTGGAGGCAGGATGCAGTAGAAAGCTGGGGTGTTaGTGGGGGTCTGAAGAAGGG | + |
Preference number: 3 (lower is better) Translates to: NLCSKPIPAPRGLEAGCSRKLGC*WGSEEG Trigger: CCCTTCTTCAGACCCCCACAAACACCCCAGCTTTCT...ACTGCATCCTGCCTCCAGCCCCCTTGGGGCAGGGATTGGCTTGGAACAGAGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR CCA 72 bp | CACAAAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTaGTCCCCTCAAGGAAGCGCAGGTGGAAGGAGGTTC | + |
Preference number: 3 (lower is better) Translates to: HKSSRDLGPRAL*SPQGSAGGRRF Trigger: GAACCTCCTTCCACCTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR CCA 72 bp | GAGTGCAATCACAGGGAAACCATGCGGATTCTAGGGTaGGGTGACCTCTTGTTCCTGGCTCCAGCCAGGCCA | + |
Preference number: 3 (lower is better) Translates to: ECNHRETMRILG*GDLLFLAPARP Trigger: TGGCCTGGCTGGAGCCAGGAACAAGAGGTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR-3UTR CAA 90 bp | AGGACCAAAGGCAAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGTGCAGTTTCTTATACTaGAGAGGTGGGCACCATGCC | + |
Preference number: 3 (lower is better) Translates to: RTKGKSQAANLKGADLTWCSFLY*RGGHHA Trigger: GGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCA...CCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTTGCCTTTGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR GCA 72 bp | AGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATaGCCTAGCCCTCAGAAAAGCCAGAAAGCTGGGGTG | + |
Preference number: 3 (lower is better) Translates to: RMQFLILERWAP*PSPQKSQKAGV Trigger: CACCCCAGCTTTCTGGCTTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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3UTR TCA 72 bp | CTAGAGTTAAAAGGAAGAACTGTGATGTCAATGGCCTaGGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAA | + |
Preference number: 3 (lower is better) Translates to: LELKGRTVMSMA*ACSLSKRTKGK Trigger: TTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACAGTTCTTCCTTTTAACTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | CCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGGACCTGGGGATGGCTaGCTAGTTCAGGGTCGCTGC | + |
Preference number: 4 (lower is better) Translates to: PRPGRQGTWAEAVSACQPGPGDG*LVQGRC Trigger: GCAGCGACCCTGAACTAGCCAGCCATCCCCAGGTCC...GGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | CCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGCTCGCTGTCATTCTTaGCCTCACGGAGGGCTCCCA | + |
Preference number: 4 (lower is better) Translates to: PRPGRQGTWAEAVSACQPARCHS*PHGGLP Trigger: TGGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGC...GGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | CAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGCTCCTACCCTGGGACTCCTTACGCAGGGATaGGGTCTCCTCCGCCAGCCA | + |
Preference number: 4 (lower is better) Translates to: QGTWAEAVSACQPAPTLGLLTQG*GLLRQP Trigger: TGGCTGGCGGAGGAGACCTCATCCCTGCGTAAGGAG...TCCCAGGGTAGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | CCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCTGCCACATGGGACTGTaGCAGAAAGAGGATGGCAGC | + |
Preference number: 4 (lower is better) Translates to: PRPGRQGTWAEAVSACQPCHMGL*QKEDGS Trigger: GCTGCCATCCTCTTTCTGTCACAGTCCCATGTGGCA...GGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | CCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCACTGCTCACAGCGGGTaGACTCCTGGATCCCCAATT | + |
Preference number: 4 (lower is better) Translates to: PRPGRQGTWAEAVSACQPTAHSG*TPGSPI Trigger: AATTGGGGATCCAGGAGTGCACCCGCTGTGAGCAGT...GGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | CAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGCTCCTACCCTGGGAAGGGCCCGGAGAACGTaGTCAGGGCAGCCATCAGGT | + |
Preference number: 4 (lower is better) Translates to: QGTWAEAVSACQPAPTLGRARRT*SGQPSG Trigger: ACCTGATGGCTGCCCTGACCACGTTCTCCGGGCCCT...TCCCAGGGTAGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | CCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCTTTGGAAATCCTCACTaGGGCCTCGCAACACAGCCA | + |
Preference number: 4 (lower is better) Translates to: PRPGRQGTWAEAVSACQPFGNPH*GLATQP Trigger: TGGCTGTGTTGCGAGGCCTCAGTGAGGATTTCCAAA...GGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | CCACGCCCTGGCCGGCAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGAGCTGAACCTTCTGTaGCTCCTTAAGCAGGGACTG | + |
Preference number: 4 (lower is better) Translates to: PRPGRQGTWAEAVSACQPELNLL*LLKQGL Trigger: CAGTCCCTGCTTAAGGAGCCACAGAAGGTTCAGCTC...GGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTGCCGGCCAGGGCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | CAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGCTCCTACCCTGGGAAGGGCAGCCATCAGGTaGCTCCTTAGTGGTCAGGAG | + |
Preference number: 4 (lower is better) Translates to: QGTWAEAVSACQPAPTLGRAAIR*LLSGQE Trigger: CTCCTGACCACTAAGGAGGCACCTGATGGCTGCCCT...TCCCAGGGTAGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | CAGGGCACATGGGCTGAGGCAGTCAGCGCCTGCCAGCCCGCTCCTACCCTGGGAAGCACCGAGGTATCATaGCCCGGGGATGTGAGTTCC | + |
Preference number: 4 (lower is better) Translates to: QGTWAEAVSACQPAPTLGSTEVS*PGDVSS Trigger: GGAACTCACATCCCCGGGCCATGATACCTCGGTGCT...TCCCAGGGTAGGAGCGGGCTGGCAGGCGCTGACTGCCTCAGCCCATGTGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | TCCAAATTGCCCTGGAAGCATAGGGGCAACTCGGACCCCGGGTCACTAGAGTTACGGTGCCACCAGCAATaGGGTGCCGGGGCCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: SKLPWKHRGNSDPGSLELRCHQQ*GAGALG Trigger: CCCGAGGGCCCCGGCACCTCATTGCTGGTGGCACCG...TAACTCTAGTGACCCGGGGTCCGAGTTGCCCCTATGCTTCCAGGGCAATTTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | AAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGGGGAGCCAGAAGCCCAGAGCTGCCCACTaGGATCCAGTCGGAGCCGCA | + |
Preference number: 4 (lower is better) Translates to: KSQAANLKGADLTWGSQKPRAAH*DPVGAA Trigger: TGCGGCTCCGACTGGATCCCAGTGGGCAGCTCTGGG...CTTCTGGCTCCCCCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | AGGACCAAAGGCAAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGCCGCCTGCAGCCTCATaGCCTCCCGGCATAGCCGGT | + |
Preference number: 4 (lower is better) Translates to: RTKGKSQAANLKGADLTWPPAAS*PPGIAG Trigger: ACCGGCTATGCCGGGAGGCCATGAGGCTGCAGGCGG...CCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTTGCCTTTGGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | TCCAAATTGCCCTGGAAGCATAGGGGCAACTCGGACCCCGGGTCACTAGAGTTACCACCAGCAATGAGGTaGCGGGGCCCTCGGGGTGTG | + |
Preference number: 4 (lower is better) Translates to: SKLPWKHRGNSDPGSLELPPAMR*RGPRGV Trigger: CACACCCCGAGGGCCCCGGCACCTCATTGCTGGTGG...TAACTCTAGTGACCCGGGGTCCGAGTTGCCCCTATGCTTCCAGGGCAATTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGCCAGCACTGTGTCTCTaGAGCAGCCAGCAGCCCCAC | + |
Preference number: 4 (lower is better) Translates to: KAQETWDQGLSGPLKEAQPALCL*SSQQPH Trigger: GTGGGGCTGCTGGCTGCTGCAGAGACACAGTGCTGG...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AACCTCTGTTCCAAGCCAATCCCTGCCCCAAGGGGGCTGGAGGCAGGATGCAGTGCAGGGCCAGAAACTTaGTCCCAGAGCTGCCCACTG | + |
Preference number: 4 (lower is better) Translates to: NLCSKPIPAPRGLEAGCSAGPET*SQSCPL Trigger: CAGTGGGCAGCTCTGGGAGCAAGTTTCTGGCCCTGC...ACTGCATCCTGCCTCCAGCCCCCTTGGGGCAGGGATTGGCTTGGAACAGAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGGTTTCTTCACCCGCCTaGAGCCTCATGGCCTCCCGG | + |
Preference number: 4 (lower is better) Translates to: KAQETWDQGLSGPLKEAQVSSPA*SLMASR Trigger: CCGGGAGGCCATGAGGCTGCAGGCGGGTGAAGAAAC...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | GGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCTCAGAAAATCGGAGCCGCAGGCATaGGCCAGGCGGGCTGCCAGC | + |
Preference number: 4 (lower is better) Translates to: GCSFLYLRGGHHALALRKSEPQA*ARRAAS Trigger: GCTGGCAGCCCGCCTGGCTCATGCCTGCGGCTCCGA...TTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGAGGGGGCTCCTTCCTTaGTCAGAATCTCCCGGGGAC | + |
Preference number: 4 (lower is better) Translates to: KAQETWDQGLSGPLKEAQRGLLP*SESPGD Trigger: GTCCCCGGGAGATTCTGATCAAGGAAGGAGCCCCCT...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | TCCAAATTGCCCTGGAAGCATAGGGGCAACTCGGACCCCGGGTCACTAGAGTTAGCGGCACACAACCCGTaGAGGCCTGCATGCCCAGGA | + |
Preference number: 4 (lower is better) Translates to: SKLPWKHRGNSDPGSLELAAHNP*RPACPG Trigger: TCCTGGGCATGCAGGCCTTCACGGGTTGTGTGCCGC...TAACTCTAGTGACCCGGGGTCCGAGTTGCCCCTATGCTTCCAGGGCAATTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | GGAGGGGAGCTGAAGCCAGGCACCACGGTGGCAGTGGAGTGCAATCACAGGGAAAGCAGGGCTGCAAACTaGTCGCTGTCATTCTTGGCC | + |
Preference number: 4 (lower is better) Translates to: GGELKPGTTVAVECNHRESRAAN*SLSFLA Trigger: GGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCT...TTCCCTGTGATTGCACTCCACTGCCACCGTGGTGCCTGGCTTCAGCTCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | GGGGCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTGGCTGCCAGCTTCAGTaGAGGGTTGCGCTGCCAGGA | + |
Preference number: 4 (lower is better) Translates to: GAGGRMQFLILERWAPCPGCQLQ*RVALPG Trigger: TCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCC...AGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGGGGAGCCAGAAGACTTGCTCCCAGAGCTaGCCACTGGGATCCAGTCGG | + |
Preference number: 4 (lower is better) Translates to: KSQAANLKGADLTWGSQKTCSQS*PLGSSR Trigger: CCGACTGGATCCCAGTGGGCAGCTCTGGGAGCAAGT...CTTCTGGCTCCCCCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GTGGCAGTGGAGTGCAATCACAGGGAAACCATGCGGATTCTAGGGTGGGGTGACGGTAGCGCTCCAGGGTaGGGTTTCGGCTCTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: VAVECNHRETMRILGWGDGSAPG*GFGSLP Trigger: AGGCAGAGAGCCGAAACCCCACCCTGGAGCGCTACC...GTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | CTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCTGCCCCAGGTACGCCTaGCACAGGGCAGACACGGTG | + |
Preference number: 4 (lower is better) Translates to: LEAGCSFLYLRGGHHALACPRYA*HRADTV Trigger: CACCGTGTCTGCCCTGTGCCAGGCGTACCTGGGGCA...GGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GGAGGGGAGCTGAAGCCAGGCACCACGGTGGCAGTGGAGTGCAATCACAGGGAACTCTTTCTGCTTCTCTaGCCCCACCTGCAGCAGGTA | + |
Preference number: 4 (lower is better) Translates to: GGELKPGTTVAVECNHRELFLLL*PHLQQV Trigger: TACCTGCTGCAGGTGGGGCCAGAGAAGCAGAAAGAG...TTCCCTGTGATTGCACTCCACTGCCACCGTGGTGCCTGGCTTCAGCTCCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | GGGGCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTCACAATCCGAGGCCATaGTGCCCGCCTTGCCCAACT | + |
Preference number: 4 (lower is better) Translates to: GAGGRMQFLILERWAPCPHNPRP*CPPCPT Trigger: AGTTGGGCAAGGCGGGCATCATGGCCTCGGATTGTG...AGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | AAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGGGGAGCCAGAAGCCACCATCTCAGGCTTaGCGGAGTTGGGGCTTACAC | + |
Preference number: 4 (lower is better) Translates to: KSQAANLKGADLTWGSQKPPSQA*RSWGLH Trigger: GTGTAAGCCCCAACTCCGTCAAGCCTGAGATGGTGG...CTTCTGGCTCCCCCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGGGGAGCCAGAAGGCTTCAGTGCAGGGTTaGGCTGCCAGGAGCTCAACT | + |
Preference number: 4 (lower is better) Translates to: KSQAANLKGADLTWGSQKASVQG*AARSST Trigger: AGTTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGC...CTTCTGGCTCCCCCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AGGACCAAAGGCAAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGATGAGCCAGGCGGGCTaGCAGCTTCAGTGCAGGGTT | + |
Preference number: 4 (lower is better) Translates to: RTKGKSQAANLKGADLTWMSQAG*QLQCRV Trigger: AACCCTGCACTGAAGCTGGCAGCCCGCCTGGCTCAT...CCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTTGCCTTTGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGGCCAAGTTGGCCACCTaGTGCGAAATGTCACTGGCC | + |
Preference number: 4 (lower is better) Translates to: KAQETWDQGLSGPLKEAQAKLAT*CEMSLA Trigger: GGCCAGTGACATTTCGCAGCAGGTGGCCAACTTGGC...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AACCTCTGTTCCAAGCCAATCCCTGCCCCAAGGGGGCTGGAGGCAGGATGCAGTAAAGAGGATGGCAGCTaGGAAGAAACCTCGGGAGGC | + |
Preference number: 4 (lower is better) Translates to: NLCSKPIPAPRGLEAGCSKEDGS*EETSGG Trigger: GCCTCCCGAGGTTTCTTCGCAGCTGCCATCCTCTTT...ACTGCATCCTGCCTCCAGCCCCCTTGGGGCAGGGATTGGCTTGGAACAGAGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGAGGAAGGGCAGCAGTTaGCACACCTCCTTACGCAGG | + |
Preference number: 4 (lower is better) Translates to: KAQETWDQGLSGPLKEAQRKGSS*HTSLRR Trigger: CCTGCGTAAGGAGGTGTGCCAACTGCTGCCCTTCCT...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGGGTTCCTTGGAGAGCTaGAGAGGTGCTAAGGAGCCG | + |
Preference number: 4 (lower is better) Translates to: KAQETWDQGLSGPLKEAQGSLES*RGAKEP Trigger: CGGCTCCTTAGCACCTCTCCAGCTCTCCAAGGAACC...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGGAGGCTGGGGTTCCTTaGAGAGCTGGAGAGGTGCTA | + |
Preference number: 4 (lower is better) Translates to: KAQETWDQGLSGPLKEAQEAGVP*RAGEVL Trigger: TAGCACCTCTCCAGCTCTCCAAGGAACCCCAGCCTC...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | GGGGCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTCTAGTTCAGGGTCGCTaGAGAAACAGGCCAGCAGGG | + |
Preference number: 4 (lower is better) Translates to: GAGGRMQFLILERWAPCPLVQGR*RNRPAG Trigger: CCCTGCTGGCCTGTTTCTGCAGCGACCCTGAACTAG...AGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AGGACCAAAGGCAAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGTCCTTAAGCAGGGACTaGTCACAGCGGGTGCACTCC | + |
Preference number: 4 (lower is better) Translates to: RTKGKSQAANLKGADLTWSLSRD*SQRVHS Trigger: GGAGTGCACCCGCTGTGAGCAGTCCCTGCTTAAGGA...CCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTTGCCTTTGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | CAGACACTGGGTATAATGACACTTAGTTGCCCTCCTCCTGGGGGCTTCTCCAACGGACAGGGCCAACACTaGCTGGTCAGAGCCAGGGGT | + |
Preference number: 4 (lower is better) Translates to: QTLGIMTLSCPPPGGFSNGQGQH*LVRARG Trigger: ACCCCTGGCTCTGACCAGGCAGTGTTGGCCCTGTCC...GTTGGAGAAGCCCCCAGGAGGAGGGCAACTAAGTGTCATTATACCCAGTGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AACCTCTGTTCCAAGCCAATCCCTGCCCCAAGGGGGCTGGAGGCAGGATGCAGTAGGAACCAGAGCTCTTaGAAGTCAGCCCAGATGCCT | + |
Preference number: 4 (lower is better) Translates to: NLCSKPIPAPRGLEAGCSRNQSS*KSAQMP Trigger: AGGCATCTGGGCTGACTTGCAAGAGCTCTGGTTCCT...ACTGCATCCTGCCTCCAGCCCCCTTGGGGCAGGGATTGGCTTGGAACAGAGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | CTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCAACCCGTGAAGGCCTaGATGCCCAGGAACCAGAGC | + |
Preference number: 4 (lower is better) Translates to: LEAGCSFLYLRGGHHALAQPVKA*MPRNQS Trigger: GCTCTGGTTCCTGGGCATGCAGGCCTTCACGGGTTG...GGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AGGACCAAAGGCAAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGGGCTCTGACAGGCACTaGTCCAAAGCAGCCATTCGG | + |
Preference number: 4 (lower is better) Translates to: RTKGKSQAANLKGADLTWGSDRH*SKAAIR Trigger: CCGAATGGCTGCTTTGGAGCAGTGCCTGTCAGAGCC...CCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTTGCCTTTGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GTGGCAGTGGAGTGCAATCACAGGGAAACCATGCGGATTCTAGGGTGGGGTGACTTCAGGACCTGGGGATaGCTGGCTAGTTCAGGGTCG | + |
Preference number: 4 (lower is better) Translates to: VAVECNHRETMRILGWGDFRTWG*LASSGS Trigger: CGACCCTGAACTAGCCAGCCATCCCCAGGTCCTGAA...GTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GGGGCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTGCCTGCAGATCTCGGTaGCATTCAGGGGGCACAGTT | + |
Preference number: 4 (lower is better) Translates to: GAGGRMQFLILERWAPCPACRSR*HSGGTV Trigger: AACTGTGCCCCCTGAATGCCACCGAGATCTGCAGGC...AGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | GGAGGGGAGCTGAAGCCAGGCACCACGGTGGCAGTGGAGTGCAATCACAGGGAACAATGTCACCTGCTTTaGCTGCCTTCGTTACTAGCA | + |
Preference number: 4 (lower is better) Translates to: GGELKPGTTVAVECNHREQCHLL*LPSLLA Trigger: TGCTAGTAACGAAGGCAGTCAAAGCAGGTGACATTG...TTCCCTGTGATTGCACTCCACTGCCACCGTGGTGCCTGGCTTCAGCTCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | TGTGATGTCAATGGCCTGAGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAAAGCATGGCCCGGGGATGTaGGTTCCCACTGCTGCAGGA | + |
Preference number: 4 (lower is better) Translates to: CDVNGLSLLSVQEDQRQKHGPGM*VPTAAG Trigger: TCCTGCAGCAGTGGGAACTCACATCCCCGGGCCATG...CTTTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | CAGACACTGGGTATAATGACACTTAGTTGCCCTCCTCCTGGGGGCTTCTCCAACCAGCCCCACCAAGAGTaGCAGAGCCTGGTCAAAGCC | + |
Preference number: 4 (lower is better) Translates to: QTLGIMTLSCPPPGGFSNQPHQE*QSLVKA Trigger: GGCTTTGACCAGGCTCTGGCACTCTTGGTGGGGCTG...GTTGGAGAAGCCCCCAGGAGGAGGGCAACTAAGTGTCATTATACCCAGTGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AGGACCAAAGGCAAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGGCTGCAGGAAGTACTTaGACAGAAGTGAGGGGGCTC | + |
Preference number: 4 (lower is better) Translates to: RTKGKSQAANLKGADLTWAAGST*TEVRGL Trigger: GAGCCCCCTCACTTCTGTGCAAGTACTTCCTGCAGC...CCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTTGCCTTTGGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | AAAGCTCAAGAGACCTGGGACCAAGGGCTCTCTGGTCCCCTCAAGGAAGCGCAGAGCAGTCTCCCTTGTTaGTGCACTAGTGAGGGCAGT | + |
Preference number: 4 (lower is better) Translates to: KAQETWDQGLSGPLKEAQSSLPC*CTSEGS Trigger: ACTGCCCTCACTAGTGCAGCAACAAGGGAGACTGCT...CTGCGCTTCCTTGAGGGGACCAGAGAGCCCTTGGTCCCAGGTCTCTTGAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GTGGCAGTGGAGTGCAATCACAGGGAAACCATGCGGATTCTAGGGTGGGGTGACAGGTGTCATCGATCATaGAGCGGCGGGCAGCATCAT | + |
Preference number: 4 (lower is better) Translates to: VAVECNHRETMRILGWGDRCHRS*SGGQHH Trigger: ATGATGCTGCCCGCCGCTCCATGATCGATGACACCT...GTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GGGGCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTGATCTCCACGCTGTCTaGCAGCACCGAGGTATCATG | + |
Preference number: 4 (lower is better) Translates to: GAGGRMQFLILERWAPCPDLHAV*QHRGIM Trigger: CATGATACCTCGGTGCTGCCAGACAGCGTGGAGATC...AGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | TCCAAATTGCCCTGGAAGCATAGGGGCAACTCGGACCCCGGGTCACTAGAGTTAGCGTTTGATCAGCCCTaGAGCGGTGACCACCAGGTT | + |
Preference number: 4 (lower is better) Translates to: SKLPWKHRGNSDPGSLELAFDQP*SGDHQV Trigger: AACCTGGTGGTCACCGCTCCAGGGCTGATCAAACGC...TAACTCTAGTGACCCGGGGTCCGAGTTGCCCCTATGCTTCCAGGGCAATTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | TGTGATGTCAATGGCCTGAGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAAAGAGCATCCCCTGGCCATaGAGGCCCTGGTGTAGTAGG | + |
Preference number: 4 (lower is better) Translates to: CDVNGLSLLSVQEDQRQKSIPWP*RPWCSR Trigger: CCTACTACACCAGGGCCTTCATGGCCAGGGGATGCT...CTTTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | GGGGCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTGCAAGTCAGCCCAGATaGCTTCATAGTCAGGGGACA | + |
Preference number: 4 (lower is better) Translates to: GAGGRMQFLILERWAPCPASQPR*LHSQGT Trigger: TGTCCCCTGACTATGAAGGCATCTGGGCTGACTTGC...AGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | CTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCTGCCTGGTTCAGAGCTaGCTCACAATCCGAGGCCAT | + |
Preference number: 4 (lower is better) Translates to: LEAGCSFLYLRGGHHALACLVQS*LTIRGH Trigger: ATGGCCTCGGATTGTGAGCCAGCTCTGAACCAGGCA...GGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GTGGCAGTGGAGTGCAATCACAGGGAAACCATGCGGATTCTAGGGTGGGGTGACGAGAGATGGCCAAGTTaGCCACCTGCTGCGAAATGT | + |
Preference number: 4 (lower is better) Translates to: VAVECNHRETMRILGWGDERWPS*PPAAKC Trigger: ACATTTCGCAGCAGGTGGCCAACTTGGCCATCTCTC...GTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | TGTGATGTCAATGGCCTGAGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAAAGATGTGGCAACAGGTCTaGAGGCCGATCTCCACGCTG | + |
Preference number: 4 (lower is better) Translates to: CDVNGLSLLSVQEDQRQKMWQQV*RPISTL Trigger: CAGCGTGGAGATCGGCCTTCAGACCTGTTGCCACAT...CTTTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | GGGGCTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTGTGAGTTCCCACTGCTaGAGGAAGTACTTGCACAGA | + |
Preference number: 4 (lower is better) Translates to: GAGGRMQFLILERWAPCPVSSHC*RKYLHR Trigger: TCTGTGCAAGTACTTCCTGCAGCAGTGGGAACTCAC...AGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GTGGCAGTGGAGTGCAATCACAGGGAAACCATGCGGATTCTAGGGTGGGGTGACATCTTGTTCAGGACCTaGGGATGGCTGGCTAGTTCA | + |
Preference number: 4 (lower is better) Translates to: VAVECNHRETMRILGWGDILFRT*GWLASS Trigger: TGAACTAGCCAGCCATCCCCAGGTCCTGAACAAGAT...GTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCTCAGAAAAGAAACCTCGGGAGGCTaGGGTTCCTTGGAGAGCTGG | + |
Preference number: 4 (lower is better) Translates to: GCSFLYLRGGHHALALRKETSGG*GSLESW Trigger: CCAGCTCTCCAAGGAACCCCAGCCTCCCGAGGTTTC...TTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GTGGCAGTGGAGTGCAATCACAGGGAAACCATGCGGATTCTAGGGTGGGGTGACGTGACAGAAAGAGGATaGCAGCTGCGAAGAAACCTC | + |
Preference number: 4 (lower is better) Translates to: VAVECNHRETMRILGWGDVTERG*QLRRNL Trigger: GAGGTTTCTTCGCAGCTGCCATCCTCTTTCTGTCAC...GTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR TCA 90 bp | GGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCTCAGAAAAGCAGCAGGTAGTGGATaGCAGCGCCAATGGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: GCSFLYLRGGHHALALRKAAGSG*QRQWPL Trigger: AAGAGGCCATTGGCGCTGTCATCCACTACCTGCTGC...TTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | TCCAAATTGCCCTGGAAGCATAGGGGCAACTCGGACCCCGGGTCACTAGAGTTAGGCAGAGCTCAAACTTaGTGGCATCTTCGGCTCTTT | + |
Preference number: 4 (lower is better) Translates to: SKLPWKHRGNSDPGSLELGRAQT*WHLRLF Trigger: AAAGAGCCGAAGATGCCAGCAAGTTTGAGCTCTGCC...TAACTCTAGTGACCCGGGGTCCGAGTTGCCCCTATGCTTCCAGGGCAATTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | CAGACACTGGGTATAATGACACTTAGTTGCCCTCCTCCTGGGGGCTTCTCCAACGCCAGGAGCTCAACTTaGTTCCTAGGATTCGTGCCA | + |
Preference number: 4 (lower is better) Translates to: QTLGIMTLSCPPPGGFSNARSST*FLGFVP Trigger: TGGCACGAATCCTAGGAAGCAAGTTGAGCTCCTGGC...GTTGGAGAAGCCCCCAGGAGGAGGGCAACTAAGTGTCATTATACCCAGTGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | AGGACCAAAGGCAAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGTCCTACGTCGGGTTTTaGCATCAATGTCACCTGCTT | + |
Preference number: 4 (lower is better) Translates to: RTKGKSQAANLKGADLTWSYVGF*HQCHLL Trigger: AAGCAGGTGACATTGATGCCAAAACCCGACGTAGGA...CCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTTGCCTTTGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | TGTGATGTCAATGGCCTGAGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAAAGCAGCGGGTGCACTCCTaGATCCCCAATTCCATAAGG | + |
Preference number: 4 (lower is better) Translates to: CDVNGLSLLSVQEDQRQKQRVHS*IPNSIR Trigger: CCTTATGGAATTGGGGATCCAGGAGTGCACCCGCTG...CTTTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | TGTGATGTCAATGGCCTGAGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAAAGCCAAAGTGGCCACGTTaGCAGCTAGAAGCAGTCTCC | + |
Preference number: 4 (lower is better) Translates to: CDVNGLSLLSVQEDQRQKPKWPR*QLEAVS Trigger: GGAGACTGCTTCTAGCTGCCAACGTGGCCACTTTGG...CTTTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | CTGGAGGCAGGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCGGCATCAATGTCACCTaGTTTGACTGCCTTCGTTAC | + |
Preference number: 4 (lower is better) Translates to: LEAGCSFLYLRGGHHALAGINVT*FDCLRY Trigger: GTAACGAAGGCAGTCAAAGCAGGTGACATTGATGCC...GGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCCTGCCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR GCA 90 bp | GGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCTCAGAAAAAGTGCAGGGTTGCGCTaGCAGGAGCTCAACTTGCTT | + |
Preference number: 4 (lower is better) Translates to: GCSFLYLRGGHHALALRKSAGLR*QELNLL Trigger: AAGCAAGTTGAGCTCCTGGCAGCGCAACCCTGCACT...TTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CCA 90 bp | GGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCTCAGAAAAAGAGCTCAAACTTGCTaGCATCTTCGGCTCTTTGGA | + |
Preference number: 4 (lower is better) Translates to: GCSFLYLRGGHHALALRKRAQTC*HLRLFG Trigger: TCCAAAGAGCCGAAGATGCCAGCAAGTTTGAGCTCT...TTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS GCA 90 bp | AGGTACGCCTGGCACAGGGCAGACACGGTGCCACCAGCAATGAGGTaGCGGGGCCCTCGGGGTGTGCCCGCAACAGCTGTCAGGCACTGG | + |
Preference number: 5 (lower is better) Translates to: RYAWHRADTVPPAMR*RGPRGVPATAVRHW Trigger: CCAGTGCCTGACAGCTGTTGCGGGCACACCCCGAGGGCCCCGGCACCTCATTGCTGGTGGCACCGTGTCTGCCCTGTGCCAGGCGTACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 90 bp | TCGGACAAGGAAGGGCAGCAGTTGGCACACCTCCTTACGCAGGGATaGGGTCTCCTCCGCCAGCCAGGCACCCAGGATCCGCACCGAGGC | + |
Preference number: 5 (lower is better) Translates to: SDKEGQQLAHLLTQG*GLLRQPGTQDPHRG Trigger: GCCTCGGTGCGGATCCTGGGTGCCTGGCTGGCGGAGGAGACCTCATCCCTGCGTAAGGAGGTGTGCCAACTGCTGCCCTTCCTTGTCCGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 90 bp | ACGGAGGGCTCCCAGGTAGCGCTCCAGGGTGGGGTTTCGGCTCTCTaGCTGGTTCAGAGCTGGCTCACAATCCGAGGCCATGATGCCCGC | + |
Preference number: 5 (lower is better) Translates to: TEGSQVALQGGVSAL*LVQSWLTIRGHDAR Trigger: GCGGGCATCATGGCCTCGGATTGTGAGCCAGCTCTGAACCAGGCAGAGAGCCGAAACCCCACCCTGGAGCGCTACCTGGGAGCCCTCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 90 bp | GCAGGGGCCAGCCAGGGCAGCAGCGGCACACAACCCGTGAAGGCCTaGATGCCCAGGAACCAGAGCTCTTGCAAGTCAGCCCAGATGCCT | + |
Preference number: 5 (lower is better) Translates to: AGASQGSSGTQPVKA*MPRNQSSCKSAQMP Trigger: AGGCATCTGGGCTGACTTGCAAGAGCTCTGGTTCCTGGGCATGCAGGCCTTCACGGGTTGTGTGCCGCTGCTGCCCTGGCTGGCCCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 90 bp | GGCCACGCCCAGGGCCCGGAGAACGTGGTCAGGGCAGCCATCAGGTaGCTCCTTAGTGGTCAGGAGTCGGTTGGGAAAGGTGAACCCAAC | + |
Preference number: 5 (lower is better) Translates to: GHAQGPENVVRAAIR*LLSGQESVGKGEPN Trigger: GTTGGGTTCACCTTTCCCAACCGACTCCTGACCACTAAGGAGGCACCTGATGGCTGCCCTGACCACGTTCTCCGGGCCCTGGGCGTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 90 bp | CACAGCCAGCAGGTCGGGCTCCGCCTCCTTCCAGCACTGTGTCTCTaGAGCAGCCAGCAGCCCCACCAAGAGTGCCAGAGCCTGGTCAAA | + |
Preference number: 5 (lower is better) Translates to: HSQQVGLRLLPALCL*SSQQPHQECQSLVK Trigger: TTTGACCAGGCTCTGGCACTCTTGGTGGGGCTGCTGGCTGCTGCAGAGACACAGTGCTGGAAGGAGGCGGAGCCCGACCTGCTGGCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 90 bp | CTTCCAGCACTGTGTCTCTGCAGCAGCCAGCAGCCCCACCAAGAGTaGCAGAGCCTGGTCAAAGCCGTAGCCATGCCCCAGGTACGCCTG | + |
Preference number: 5 (lower is better) Translates to: LPALCLCSSQQPHQE*QSLVKAVAMPQVRL Trigger: CAGGCGTACCTGGGGCATGGCTACGGCTTTGACCAGGCTCTGGCACTCTTGGTGGGGCTGCTGGCTGCTGCAGAGACACAGTGCTGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 90 bp | GGGCTGCCAGCTTCAGTGCAGGGTTGCGCTGCCAGGAGCTCAACTTaGTTCCTAGGATTCGTGCCAGCCCAGCCTGCAGATCTCGGTGGC | + |
Preference number: 5 (lower is better) Translates to: GLPASVQGCAARSST*FLGFVPAQPADLGG Trigger: GCCACCGAGATCTGCAGGCTGGGCTGGCACGAATCCTAGGAAGCAAGTTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS-3UTR CAA 90 bp | GGAGGGGAGCTGAAGCCAGGCACCACGGTGGCAGTGGAGTGCAATCACAGGGAATGCTCGCTGTCATTCTaGGCCTCACGGAGGGCTCCC | + |
Preference number: 5 (lower is better) Translates to: GGELKPGTTVAVECNHRECSLSF*ASRRAP Trigger: GGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGCA...TTCCCTGTGATTGCACTCCACTGCCACCGTGGTGCCTGGCTTCAGCTCCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS TCA 90 bp | CACTGCCTGGTCAGAGCCAGGGGTGGCTCGTGCCACATGGGACTGTaGCAGAAAGAGGATGGCAGCTGCGAAGAAACCTCGGGAGGCTGG | + |
Preference number: 5 (lower is better) Translates to: HCLVRARGGSCHMGL*QKEDGSCEETSGGW Trigger: CCAGCCTCCCGAGGTTTCTTCGCAGCTGCCATCCTCTTTCTGTCACAGTCCCATGTGGCACGAGCCACCCCTGGCTCTGACCAGGCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS-3UTR CAA 90 bp | AACCTCTGTTCCAAGCCAATCCCTGCCCCAAGGGGGCTGGAGGCAGGATGCAGTGGAGGCTGGGGTTCCTaGGAGAGCTGGAGAGGTGCT | + |
Preference number: 5 (lower is better) Translates to: NLCSKPIPAPRGLEAGCSGGWGS*ESWRGA Trigger: AGCACCTCTCCAGCTCTCCAAGGAACCCCAGCCTCC...ACTGCATCCTGCCTCCAGCCCCCTTGGGGCAGGGATTGGCTTGGAACAGAGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS CCA 90 bp | CCTTCGTTACTAGCAGCAGGGCTGCAAACTGCTCGCTGTCATTCTTaGCCTCACGGAGGGCTCCCAGGTAGCGCTCCAGGGTGGGGTTTC | + |
Preference number: 5 (lower is better) Translates to: PSLLAAGLQTARCHS*PHGGLPGSAPGWGF Trigger: GAAACCCCACCCTGGAGCGCTACCTGGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCTGCTAGTAACGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 90 bp | AGGGCCAACACTGCCTGGTCAGAGCCAGGGGTGGCTCGTGCCACATaGGACTGTGACAGAAAGAGGATGGCAGCTGCGAAGAAACCTCGG | + |
Preference number: 5 (lower is better) Translates to: RANTAWSEPGVARAT*DCDRKRMAAAKKPR Trigger: CCGAGGTTTCTTCGCAGCTGCCATCCTCTTTCTGTCACAGTCCCATGTGGCACGAGCCACCCCTGGCTCTGACCAGGCAGTGTTGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 90 bp | AGGGCTCTGACAGGCACTGCTCCAAAGCAGCCATTCGGTAATGGCTaGCCGTTTCTTCACCCGCCTGCAGCCTCATGGCCTCCCGGCATA | + |
Preference number: 5 (lower is better) Translates to: RALTGTAPKQPFGNG*PFLHPPAASWPPGI Trigger: TATGCCGGGAGGCCATGAGGCTGCAGGCGGGTGAAGAAACGGCCAGCCATTACCGAATGGCTGCTTTGGAGCAGTGCCTGTCAGAGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 90 bp | TCTCCACGCTGTCTGGCAGCACCGAGGTATCATGGCCCGGGGATGTaGGTTCCCACTGCTGCAGGAAGTACTTGCACAGAAGTGAGGGGG | + |
Preference number: 5 (lower is better) Translates to: SPRCLAAPRYHGPGM*VPTAAGSTCTEVRG Trigger: CCCCCTCACTTCTGTGCAAGTACTTCCTGCAGCAGTGGGAACTCACATCCCCGGGCCATGATACCTCGGTGCTGCCAGACAGCGTGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 90 bp | CCTGGAGCGGTGACCACCAGGTTGAGGAAGATGTGGCAACAGGTCTaGAGGCCGATCTCCACGCTGTCTGGCAGCACCGAGGTATCATGG | + |
Preference number: 5 (lower is better) Translates to: PGAVTTRLRKMWQQV*RPISTLSGSTEVSW Trigger: CCATGATACCTCGGTGCTGCCAGACAGCGTGGAGATCGGCCTTCAGACCTGTTGCCACATCTTCCTCAACCTGGTGGTCACCGCTCCAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 90 bp | AGGCCTGCATGCCCAGGAACCAGAGCTCTTGCAAGTCAGCCCAGATaGCTTCATAGTCAGGGGACAGGGCCAACACTGCCTGGTCAGAGC | + |
Preference number: 5 (lower is better) Translates to: RPACPGTRALASQPR*LHSQGTGPTLPGQS Trigger: GCTCTGACCAGGCAGTGTTGGCCCTGTCCCCTGACTATGAAGGCATCTGGGCTGACTTGCAAGAGCTCTGGTTCCTGGGCATGCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 90 bp | GAGGAAGATGTGGCAACAGGTCTGAAGGCCGATCTCCACGCTGTCTaGCAGCACCGAGGTATCATGGCCCGGGGATGTGAGTTCCCACTG | + |
Preference number: 5 (lower is better) Translates to: EEDVATGLKADLHAV*QHRGIMARGCEFPL Trigger: CAGTGGGAACTCACATCCCCGGGCCATGATACCTCGGTGCTGCCAGACAGCGTGGAGATCGGCCTTCAGACCTGTTGCCACATCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS-3UTR CAA 90 bp | AACCTCTGTTCCAAGCCAATCCCTGCCCCAAGGGGGCTGGAGGCAGGATGCAGTAAGGAAGGGCAGCAGTaGGCACACCTCCTTACGCAG | + |
Preference number: 5 (lower is better) Translates to: NLCSKPIPAPRGLEAGCSKEGQQ*AHLLTQ Trigger: CTGCGTAAGGAGGTGTGCCAACTGCTGCCCTTCCTT...ACTGCATCCTGCCTCCAGCCCCCTTGGGGCAGGGATTGGCTTGGAACAGAGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CAA 90 bp | AACCTCTGTTCCAAGCCAATCCCTGCCCCAAGGGGGCTGGAGGCAGGATGCAGTGGAGAGATGGCCAAGTaGGCCACCTGCTGCGAAATG | + |
Preference number: 5 (lower is better) Translates to: NLCSKPIPAPRGLEAGCSGEMAK*ATCCEM Trigger: CATTTCGCAGCAGGTGGCCAACTTGGCCATCTCTCC...ACTGCATCCTGCCTCCAGCCCCCTTGGGGCAGGGATTGGCTTGGAACAGAGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS TCA 90 bp | AGAGCTCAAACTTGCTGGCATCTTCGGCTCTTTGGAAATCCTCACTaGGGCCTCGCAACACAGCCAGCAGGTCGGGCTCCGCCTCCTTCC | + |
Preference number: 5 (lower is better) Translates to: RAQTCWHLRLFGNPH*GLATQPAGRAPPPS Trigger: GGAAGGAGGCGGAGCCCGACCTGCTGGCTGTGTTGCGAGGCCTCAGTGAGGATTTCCAAAGAGCCGAAGATGCCAGCAAGTTTGAGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS-3UTR CAA 90 bp | AAAAGCCAAGCGGCCAATTTAAAGGGCGCGGACCTGACCTGGGGGAGCCAGAAGGCCACCATCTCAGGCTaGACGGAGTTGGGGCTTACA | + |
Preference number: 5 (lower is better) Translates to: KSQAANLKGADLTWGSQKATISG*TELGLT Trigger: TGTAAGCCCCAACTCCGTCAAGCCTGAGATGGTGGC...CTTCTGGCTCCCCCAGGTCAGGTCCGCGCCCTTTAAATTGGCCGCTTGGCTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS CCA 90 bp | GTAAGGAATGTGCTAAGGATGGGGATCTTGTTCAGGACCTGGGGATaGCTGGCTAGTTCAGGGTCGCTGCAGAAACAGGCCAGCAGGGCC | + |
Preference number: 5 (lower is better) Translates to: VRNVLRMGILFRTWG*LASSGSLQKQASRA Trigger: GGCCCTGCTGGCCTGTTTCTGCAGCGACCCTGAACTAGCCAGCCATCCCCAGGTCCTGAACAAGATCCCCATCCTTAGCACATTCCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 90 bp | CGGGCTGTAAGGAATGTGCTAAGGATGGGGATCTTGTTCAGGACCTaGGGATGGCTGGCTAGTTCAGGGTCGCTGCAGAAACAGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: RAVRNVLRMGILFRT*GWLASSGSLQKQAS Trigger: GCTGGCCTGTTTCTGCAGCGACCCTGAACTAGCCAGCCATCCCCAGGTCCTGAACAAGATCCCCATCCTTAGCACATTCCTTACAGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 90 bp | AGCGCCAATGGCCTCTTTCATAATGCTCACGAGCTGAACCTTCTGTaGCTCCTTAAGCAGGGACTGCTCACAGCGGGTGCACTCCTGGAT | + |
Preference number: 5 (lower is better) Translates to: SANGLFHNAHELNLL*LLKQGLLTAGALLD Trigger: ATCCAGGAGTGCACCCGCTGTGAGCAGTCCCTGCTTAAGGAGCCACAGAAGGTTCAGCTCGTGAGCATTATGAAAGAGGCCATTGGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS-3UTR CAA 90 bp | TCCAAATTGCCCTGGAAGCATAGGGGCAACTCGGACCCCGGGTCACTAGAGTTATGCCAGGAGCTCAACTaGCTTCCTAGGATTCGTGCC | + |
Preference number: 5 (lower is better) Translates to: SKLPWKHRGNSDPGSLELCQELN*LPRIRA Trigger: GGCACGAATCCTAGGAAGCAAGTTGAGCTCCTGGCA...TAACTCTAGTGACCCGGGGTCCGAGTTGCCCCTATGCTTCCAGGGCAATTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CAA 90 bp | TCCAAATTGCCCTGGAAGCATAGGGGCAACTCGGACCCCGGGTCACTAGAGTTATCAGGCTTGACGGAGTaGGGGCTTACACTACCTAGC | + |
Preference number: 5 (lower is better) Translates to: SKLPWKHRGNSDPGSLELSGLTE*GLTLPS Trigger: GCTAGGTAGTGTAAGCCCCAACTCCGTCAAGCCTGA...TAACTCTAGTGACCCGGGGTCCGAGTTGCCCCTATGCTTCCAGGGCAATTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS GCA 90 bp | AGCCCCAAAGTGGCCACGTTGGCAGCTAGAAGCAGTCTCCCTTGTTaGTGCACTAGTGAGGGCAGTGACGTCATCAGGGTGTTCATAAGA | + |
Preference number: 5 (lower is better) Translates to: SPKVATLAARSSLPC*CTSEGSDVIRVFIR Trigger: TCTTATGAACACCCTGATGACGTCACTGCCCTCACTAGTGCAGCAACAAGGGAGACTGCTTCTAGCTGCCAACGTGGCCACTTTGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS-3UTR CAA 90 bp | TCCAAATTGCCCTGGAAGCATAGGGGCAACTCGGACCCCGGGTCACTAGAGTTATGGCAGAGCTCAAACTaGCTGGCATCTTCGGCTCTT | + |
Preference number: 5 (lower is better) Translates to: SKLPWKHRGNSDPGSLELWQSSN*LASSAL Trigger: AAGAGCCGAAGATGCCAGCAAGTTTGAGCTCTGCCA...TAACTCTAGTGACCCGGGGTCCGAGTTGCCCCTATGCTTCCAGGGCAATTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS GCA 90 bp | CCCAAAGTGGCCACGTTGGCAGCTAGAAGCAGTCTCCCTTGTTGCTaGACTAGTGAGGGCAGTGACGTCATCAGGGTGTTCATAAGAGAT | + |
Preference number: 5 (lower is better) Translates to: PKVATLAARSSLPCC*TSEGSDVIRVFIRD Trigger: ATCTCTTATGAACACCCTGATGACGTCACTGCCCTCACTAGTGCAGCAACAAGGGAGACTGCTTCTAGCTGCCAACGTGGCCACTTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS-3UTR CAA 90 bp | GGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCTCAGAAAAGTGGTCAGGAGTCGGTaGGGAAAGGTGAACCCAACG | + |
Preference number: 5 (lower is better) Translates to: GCSFLYLRGGHHALALRKVVRSR*GKVNPT Trigger: CGTTGGGTTCACCTTTCCCAACCGACTCCTGACCAC...TTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CAA 90 bp | TGTGATGTCAATGGCCTGAGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAAAGTGCTGCAGGAAGTACTaGCACAGAAGTGAGGGGGCT | + |
Preference number: 5 (lower is better) Translates to: CDVNGLSLLSVQEDQRQKCCRKY*HRSEGA Trigger: AGCCCCCTCACTTCTGTGCAAGTACTTCCTGCAGCA...CTTTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CAA 90 bp | GGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCTCAGAAAACAGGAACCAGAGCTCTaGCAAGTCAGCCCAGATGCC | + |
Preference number: 5 (lower is better) Translates to: GCSFLYLRGGHHALALRKQEPEL*QVSPDA Trigger: GGCATCTGGGCTGACTTGCAAGAGCTCTGGTTCCTG...TTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CAA 90 bp | CAGACACTGGGTATAATGACACTTAGTTGCCCTCCTCCTGGGGGCTTCTCCAACATCCTACGTCGGGTTTaGGCATCAATGTCACCTGCT | + |
Preference number: 5 (lower is better) Translates to: QTLGIMTLSCPPPGGFSNILRRV*ASMSPA Trigger: AGCAGGTGACATTGATGCCAAAACCCGACGTAGGAT...GTTGGAGAAGCCCCCAGGAGGAGGGCAACTAAGTGTCATTATACCCAGTGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CAA 90 bp | GGATGCAGTTTCTTATACTTGAGAGGTGGGCACCATGCCCTAGCCCTCAGAAAACTAAGGATGGGGATCTaGTTCAGGACCTGGGGATGG | + |
Preference number: 5 (lower is better) Translates to: GCSFLYLRGGHHALALRKLRMGI*FRTWGW Trigger: CCATCCCCAGGTCCTGAACAAGATCCCCATCCTTAG...TTTTCTGAGGGCTAGGGCATGGTGCCCACCTCTCAAGTATAAGAAACTGCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS-3UTR CAA 90 bp | TGTGATGTCAATGGCCTGAGCCTGCTCTCTGTCCAAGAGGACCAAAGGCAAAAGTCAATGTCACCTGCTTaGACTGCCTTCGTTACTAGC | + |
Preference number: 5 (lower is better) Translates to: CDVNGLSLLSVQEDQRQKSMSPA*TAFVTS Trigger: GCTAGTAACGAAGGCAGTCAAAGCAGGTGACATTGA...CTTTTGCCTTTGGTCCTCTTGGACAGAGAGCAGGCTCAGGCCATTGACATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030637.14 |
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CDS TCA 72 bp | ACGCCTGGCACAGGGCAGACACGGTGCCACCAGCAATaGGGTGCCGGGGCCCTCGGGGTGTGCCCGCAACAG | + |
Preference number: 6 (lower is better) Translates to: TPGTGQTRCHQQ*GAGALGVCPQQ Trigger: CTGTTGCGGGCACACCCCGAGGGCCCCGGCACCTCATTGCTGGTGGCACCGTGTCTGCCCTGTGCCAGGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | TGGCACAGGGCAGACACGGTGCCACCAGCAATGAGGTaGCGGGGCCCTCGGGGTGTGCCCGCAACAGCTGTC | + |
Preference number: 6 (lower is better) Translates to: WHRADTVPPAMR*RGPRGVPATAV Trigger: GACAGCTGTTGCGGGCACACCCCGAGGGCCCCGGCACCTCATTGCTGGTGGCACCGTGTCTGCCCTGTGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | TCAGGACCTGGGGATGGCTGGCTAGTTCAGGGTCGCTaGAGAAACAGGCCAGCAGGGCCACGCCCAGGGCCC | + |
Preference number: 6 (lower is better) Translates to: SGPGDGWLVQGR*RNRPAGPRPGP Trigger: GGGCCCTGGGCGTGGCCCTGCTGGCCTGTTTCTGCAGCGACCCTGAACTAGCCAGCCATCCCCAGGTCCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | CAGGTCGGGCTCCGCCTCCTTCCAGCACTGTGTCTCTaGAGCAGCCAGCAGCCCCACCAAGAGTGCCAGAGC | + |
Preference number: 6 (lower is better) Translates to: QVGLRLLPALCL*SSQQPHQECQS Trigger: GCTCTGGCACTCTTGGTGGGGCTGCTGGCTGCTGCAGAGACACAGTGCTGGAAGGAGGCGGAGCCCGACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | GCCGCAGGCATGAGCCAGGCGGGCTGCCAGCTTCAGTaGAGGGTTGCGCTGCCAGGAGCTCAACTTGCTTCC | + |
Preference number: 6 (lower is better) Translates to: AAGMSQAGCQLQ*RVALPGAQLAS Trigger: GGAAGCAAGTTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCCCGCCTGGCTCATGCCTGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 72 bp | CTGCCTGGTTCAGAGCTGGCTCACAATCCGAGGCCATaGTGCCCGCCTTGCCCAACTGTCCCGCCGCAGCCA | + |
Preference number: 6 (lower is better) Translates to: LPGSELAHNPRP*CPPCPTVPPQP Trigger: TGGCTGCGGCGGGACAGTTGGGCAAGGCGGGCATCATGGCCTCGGATTGTGAGCCAGCTCTGAACCAGGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 72 bp | GAAGGGCAGCAGTTGGCACACCTCCTTACGCAGGGATaGGGTCTCCTCCGCCAGCCAGGCACCCAGGATCCG | + |
Preference number: 6 (lower is better) Translates to: EGQQLAHLLTQG*GLLRQPGTQDP Trigger: CGGATCCTGGGTGCCTGGCTGGCGGAGGAGACCTCATCCCTGCGTAAGGAGGTGTGCCAACTGCTGCCCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | CTGTGTCTCTGCAGCAGCCAGCAGCCCCACCAAGAGTaGCAGAGCCTGGTCAAAGCCGTAGCCATGCCCCAG | + |
Preference number: 6 (lower is better) Translates to: LCLCSSQQPHQE*QSLVKAVAMPQ Trigger: CTGGGGCATGGCTACGGCTTTGACCAGGCTCTGGCACTCTTGGTGGGGCTGCTGGCTGCTGCAGAGACACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | AGCCAGGGCAGCAGCGGCACACAACCCGTGAAGGCCTaGATGCCCAGGAACCAGAGCTCTTGCAAGTCAGCC | + |
Preference number: 6 (lower is better) Translates to: SQGSSGTQPVKA*MPRNQSSCKSA Trigger: GGCTGACTTGCAAGAGCTCTGGTTCCTGGGCATGCAGGCCTTCACGGGTTGTGTGCCGCTGCTGCCCTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | CAGGGTGGGGTTTCGGCTCTCTGCCTGGTTCAGAGCTaGCTCACAATCCGAGGCCATGATGCCCGCCTTGCC | + |
Preference number: 6 (lower is better) Translates to: QGGVSALCLVQS*LTIRGHDARLA Trigger: GGCAAGGCGGGCATCATGGCCTCGGATTGTGAGCCAGCTCTGAACCAGGCAGAGAGCCGAAACCCCACCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | CTAGCAGCAGGGCTGCAAACTGCTCGCTGTCATTCTTaGCCTCACGGAGGGCTCCCAGGTAGCGCTCCAGGG | + |
Preference number: 6 (lower is better) Translates to: LAAGLQTARCHS*PHGGLPGSAPG Trigger: CCCTGGAGCGCTACCTGGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCTGCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 90 bp | AGCCGTACCTCCACGCACGCTAGATTCACGAGCAGGGCCAGAAACTaGCTCCCAGAGCTGCCCACTGGGATCCAGTCGGAGCCGCAGGCA | + |
Preference number: 6 (lower is better) Translates to: SRTSTHARFTSRARN*LPELPTGIQSEPQA Trigger: TGCCTGCGGCTCCGACTGGATCCCAGTGGGCAGCTCTGGGAGCAAGTTTCTGGCCCTGCTCGTGAATCTAGCGTGCGTGGAGGTACGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 72 bp | GCCGGGAAGGAGGAGCCGGAGAGCATCCCCTGGCCATaGAGGCCCTGGTGTAGTAGGAGAGATGGCCAAGTT | + |
Preference number: 6 (lower is better) Translates to: AGKEEPESIPWP*RPWCSRRDGQV Trigger: AACTTGGCCATCTCTCCTACTACACCAGGGCCTTCATGGCCAGGGGATGCTCTCCGGCTCCTCCTTCCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | CAGGGCCCGGAGAACGTGGTCAGGGCAGCCATCAGGTaGCTCCTTAGTGGTCAGGAGTCGGTTGGGAAAGGT | + |
Preference number: 6 (lower is better) Translates to: QGPENVVRAAIR*LLSGQESVGKG Trigger: ACCTTTCCCAACCGACTCCTGACCACTAAGGAGGCACCTGATGGCTGCCCTGACCACGTTCTCCGGGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | GATTCACGAGCAGGGCCAGAAACTTGCTCCCAGAGCTaGCCACTGGGATCCAGTCGGAGCCGCAGGCATGAG | + |
Preference number: 6 (lower is better) Translates to: DSRAGPETCSQS*PLGSSRSRRHE Trigger: CTCATGCCTGCGGCTCCGACTGGATCCCAGTGGGCAGCTCTGGGAGCAAGTTTCTGGCCCTGCTCGTGAATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | GTGGCAACAGGTCTGAAGGCCGATCTCCACGCTGTCTaGCAGCACCGAGGTATCATGGCCCGGGGATGTGAG | + |
Preference number: 6 (lower is better) Translates to: VATGLKADLHAV*QHRGIMARGCE Trigger: CTCACATCCCCGGGCCATGATACCTCGGTGCTGCCAGACAGCGTGGAGATCGGCCTTCAGACCTGTTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | CATGAGCCAGGCGGGCTGCCAGCTTCAGTGCAGGGTTaGGCTGCCAGGAGCTCAACTTGCTTCCTAGGATTC | + |
Preference number: 6 (lower is better) Translates to: HEPGGLPASVQG*AARSSTCFLGF Trigger: GAATCCTAGGAAGCAAGTTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGCTGGCAGCCCGCCTGGCTCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | ACTGCCTGGTCAGAGCCAGGGGTGGCTCGTGCCACATaGGACTGTGACAGAAAGAGGATGGCAGCTGCGAAG | + |
Preference number: 6 (lower is better) Translates to: TAWSEPGVARAT*DCDRKRMAAAK Trigger: CTTCGCAGCTGCCATCCTCTTTCTGTCACAGTCCCATGTGGCACGAGCCACCCCTGGCTCTGACCAGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 90 bp | GGGCAGCAGCTGGCAGAGCTCAAACTTGCTGGCATCTTCGGCTCTTaGGAAATCCTCACTGAGGCCTCGCAACACAGCCAGCAGGTCGGG | + |
Preference number: 6 (lower is better) Translates to: GQQLAELKLAGIFGS*EILTEASQHSQQVG Trigger: CCCGACCTGCTGGCTGTGTTGCGAGGCCTCAGTGAGGATTTCCAAAGAGCCGAAGATGCCAGCAAGTTTGAGCTCTGCCAGCTGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 90 bp | GAGGTGCTAAGGAGCCGGGCCATTAGGAGCCCCAAAGTGGCCACGTaGGCAGCTAGAAGCAGTCTCCCTTGTTGCTGCACTAGTGAGGGC | + |
Preference number: 6 (lower is better) Translates to: EVLRSRAIRSPKVAT*AARSSLPCCCTSEG Trigger: GCCCTCACTAGTGCAGCAACAAGGGAGACTGCTTCTAGCTGCCAACGTGGCCACTTTGGGGCTCCTAATGGCCCGGCTCCTTAGCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 72 bp | ACTTGCTGGCATCTTCGGCTCTTTGGAAATCCTCACTaGGGCCTCGCAACACAGCCAGCAGGTCGGGCTCCG | + |
Preference number: 6 (lower is better) Translates to: TCWHLRLFGNPH*GLATQPAGRAP Trigger: CGGAGCCCGACCTGCTGGCTGTGTTGCGAGGCCTCAGTGAGGATTTCCAAAGAGCCGAAGATGCCAGCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 72 bp | ATCAGAATCTCCCGGGGACCATCTTCAACAGTCAGGTaGCACCAGCCGGGAAGGAGGAGCCGGAGAGCATCC | + |
Preference number: 6 (lower is better) Translates to: IRISRGPSSTVR*HQPGRRSRRAS Trigger: GGATGCTCTCCGGCTCCTCCTTCCCGGCTGGTGTCACCTGACTGTTGAAGATGGTCCCCGGGAGATTCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 72 bp | GTGACCACCAGGTTGAGGAAGATGTGGCAACAGGTCTaGAGGCCGATCTCCACGCTGTCTGGCAGCACCGAG | + |
Preference number: 6 (lower is better) Translates to: VTTRLRKMWQQV*RPISTLSGSTE Trigger: CTCGGTGCTGCCAGACAGCGTGGAGATCGGCCTTCAGACCTGTTGCCACATCTTCCTCAACCTGGTGGTCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | GCTTCAGTGCAGGGTTGCGCTGCCAGGAGCTCAACTTaGTTCCTAGGATTCGTGCCAGCCCAGCCTGCAGAT | + |
Preference number: 6 (lower is better) Translates to: ASVQGCAARSST*FLGFVPAQPAD Trigger: ATCTGCAGGCTGGGCTGGCACGAATCCTAGGAAGCAAGTTGAGCTCCTGGCAGCGCAACCCTGCACTGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | CCTAGGATTCGTGCCAGCCCAGCCTGCAGATCTCGGTaGCATTCAGGGGGCACAGTTGTTGGGGGCAGAAAA | + |
Preference number: 6 (lower is better) Translates to: PRIRASPACRSR*HSGGTVVGGRK Trigger: TTTTCTGCCCCCAACAACTGTGCCCCCTGAATGCCACCGAGATCTGCAGGCTGGGCTGGCACGAATCCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | GGAGCCGGGCCATTAGGAGCCCCAAAGTGGCCACGTTaGCAGCTAGAAGCAGTCTCCCTTGTTGCTGCACTA | + |
Preference number: 6 (lower is better) Translates to: GAGPLGAPKWPR*QLEAVSLVAAL Trigger: TAGTGCAGCAACAAGGGAGACTGCTTCTAGCTGCCAACGTGGCCACTTTGGGGCTCCTAATGGCCCGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | ACAGGCACTGCTCCAAAGCAGCCATTCGGTAATGGCTaGCCGTTTCTTCACCCGCCTGCAGCCTCATGGCCT | + |
Preference number: 6 (lower is better) Translates to: TGTAPKQPFGNG*PFLHPPAASWP Trigger: AGGCCATGAGGCTGCAGGCGGGTGAAGAAACGGCCAGCCATTACCGAATGGCTGCTTTGGAGCAGTGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 72 bp | AGGAGCCGGGCCATTAGGAGCCCCAAAGTGGCCACGTaGGCAGCTAGAAGCAGTCTCCCTTGTTGCTGCACT | + |
Preference number: 6 (lower is better) Translates to: RSRAIRSPKVAT*AARSSLPCCCT Trigger: AGTGCAGCAACAAGGGAGACTGCTTCTAGCTGCCAACGTGGCCACTTTGGGGCTCCTAATGGCCCGGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | TTGACTGCCTTCGTTACTAGCAGCAGGGCTGCAAACTaGTCGCTGTCATTCTTGGCCTCACGGAGGGCTCCC | + |
Preference number: 6 (lower is better) Translates to: LTAFVTSSRAAN*SLSFLASRRAP Trigger: GGGAGCCCTCCGTGAGGCCAAGAATGACAGCGAGCAGTTTGCAGCCCTGCTGCTAGTAACGAAGGCAGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS GCA 72 bp | CCTGGTGTAGTAGGAGAGATGGCCAAGTTGGCCACCTaGTGCGAAATGTCACTGGCCTCCTCAGCCTCCTCA | + |
Preference number: 6 (lower is better) Translates to: PGVVGEMAKLAT*CEMSLASSASS Trigger: TGAGGAGGCTGAGGAGGCCAGTGACATTTCGCAGCAGGTGGCCAACTTGGCCATCTCTCCTACTACACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | GTGCTAAGGATGGGGATCTTGTTCAGGACCTGGGGATaGCTGGCTAGTTCAGGGTCGCTGCAGAAACAGGCC | + |
Preference number: 6 (lower is better) Translates to: VLRMGILFRTWG*LASSGSLQKQA Trigger: GGCCTGTTTCTGCAGCGACCCTGAACTAGCCAGCCATCCCCAGGTCCTGAACAAGATCCCCATCCTTAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | AAAGAGGATGGCAGCTGCGAAGAAACCTCGGGAGGCTaGGGTTCCTTGGAGAGCTGGAGAGGTGCTAAGGAG | + |
Preference number: 6 (lower is better) Translates to: KEDGSCEETSGG*GSLESWRGAKE Trigger: CTCCTTAGCACCTCTCCAGCTCTCCAAGGAACCCCAGCCTCCCGAGGTTTCTTCGCAGCTGCCATCCTCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 90 bp | TGGTCAGGGCAGCCATCAGGTGCCTCCTTAGTGGTCAGGAGTCGGTaGGGAAAGGTGAACCCAACGGCATCAAAGATCCTACGTCGGGTT | + |
Preference number: 6 (lower is better) Translates to: WSGQPSGASLVVRSR*GKVNPTASKILRRV Trigger: AACCCGACGTAGGATCTTTGATGCCGTTGGGTTCACCTTTCCCAACCGACTCCTGACCACTAAGGAGGCACCTGATGGCTGCCCTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 72 bp | TGTCTGGCAGCACCGAGGTATCATGGCCCGGGGATGTaGGTTCCCACTGCTGCAGGAAGTACTTGCACAGAA | + |
Preference number: 6 (lower is better) Translates to: CLAAPRYHGPGM*VPTAAGSTCTE Trigger: TTCTGTGCAAGTACTTCCTGCAGCAGTGGGAACTCACATCCCCGGGCCATGATACCTCGGTGCTGCCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | AGTGTCTTGGCATATCGGACAAGGAAGGGCAGCAGTTaGCACACCTCCTTACGCAGGGATGAGGTCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: SVLAYRTRKGSS*HTSLRRDEVSS Trigger: GGAGGAGACCTCATCCCTGCGTAAGGAGGTGTGCCAACTGCTGCCCTTCCTTGTCCGATATGCCAAGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CCA 72 bp | GGCCTCTTTCATAATGCTCACGAGCTGAACCTTCTGTaGCTCCTTAAGCAGGGACTGCTCACAGCGGGTGCA | + |
Preference number: 6 (lower is better) Translates to: GLFHNAHELNLL*LLKQGLLTAGA Trigger: TGCACCCGCTGTGAGCAGTCCCTGCTTAAGGAGCCACAGAAGGTTCAGCTCGTGAGCATTATGAAAGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 72 bp | CTGGCAGAGCTCAAACTTGCTGGCATCTTCGGCTCTTaGGAAATCCTCACTGAGGCCTCGCAACACAGCCAG | + |
Preference number: 6 (lower is better) Translates to: LAELKLAGIFGS*EILTEASQHSQ Trigger: CTGGCTGTGTTGCGAGGCCTCAGTGAGGATTTCCAAAGAGCCGAAGATGCCAGCAAGTTTGAGCTCTGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 72 bp | GGCAGAAAAAGGGGCAGCAGCTGGCAGAGCTCAAACTaGCTGGCATCTTCGGCTCTTTGGAAATCCTCACTG | + |
Preference number: 6 (lower is better) Translates to: GRKRGSSWQSSN*LASSALWKSSL Trigger: CAGTGAGGATTTCCAAAGAGCCGAAGATGCCAGCAAGTTTGAGCTCTGCCAGCTGCTGCCCCTTTTTCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS TCA 72 bp | ACAGCGCCAATGGCCTCTTTCATAATGCTCACGAGCTaGACCTTCTGTGGCTCCTTAAGCAGGGACTGCTCA | + |
Preference number: 6 (lower is better) Translates to: TAPMASFIMLTS*TFCGSLSRDCS Trigger: TGAGCAGTCCCTGCTTAAGGAGCCACAGAAGGTTCAGCTCGTGAGCATTATGAAAGAGGCCATTGGCGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 90 bp | TTGGGAAAGGTGAACCCAACGGCATCAAAGATCCTACGTCGGGTTTaGGCATCAATGTCACCTGCTTTGACTGCCTTCGTTACTAGCAGC | + |
Preference number: 6 (lower is better) Translates to: LGKVNPTASKILRRV*ASMSPALTAFVTSS Trigger: GCTGCTAGTAACGAAGGCAGTCAAAGCAGGTGACATTGATGCCAAAACCCGACGTAGGATCTTTGATGCCGTTGGGTTCACCTTTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |
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CDS CAA 72 bp | GTGAACCCAACGGCATCAAAGATCCTACGTCGGGTTTaGGCATCAATGTCACCTGCTTTGACTGCCTTCGTT | + |
Preference number: 6 (lower is better) Translates to: VNPTASKILRRV*ASMSPALTAFV Trigger: AACGAAGGCAGTCAAAGCAGGTGACATTGATGCCAAAACCCGACGTAGGATCTTTGATGCCGTTGGGTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030637.14 ENSMUST00000106116.2 |