Pregenerated sensors for NCBP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020783Ensembl transcript IDs: ENSMUST00000021135.5
Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTTTaGCTCCCAAGTGTTGGGATTAAAGGCGGGCACCACCACCGCCCA | + |
Preference number: 1 (lower is better) Translates to: LCRPGWPRTQKSACL*LPSVGIKGGHHHRP Trigger: TGGGCGGTGGTGGTGCCCGCCTTTAATCCCAACACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | TGCCCTGCAAGAGGCCTGGGACCTCAGAGGGTGGAGTGGCTCTTCTaGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGAAT | + |
Preference number: 1 (lower is better) Translates to: CPARGLGPQRVEWLF*LGVCNLTEDLLGQN Trigger: ATTCTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTCCACCCTCTGAGGTCCCAGGCCTCTTGCAGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | AAGACTGAGTGTGTACCCCAGGCACCTCAGGAGGCCAGGCAGTGCTaGTGGCCAGAGCTGCACAGGGCACAGGTTACTTTCTGCACCTCT | + |
Preference number: 1 (lower is better) Translates to: KTECVPQAPQEARQC*WPELHRAQVTFCTS Trigger: AGAGGTGCAGAAAGTAACCTGTGCCCTGTGCAGCTCTGGCCATCAGCACTGCCTGGCCTCCTGAGGTGCCTGGGGTACACACTCAGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | CTGCAAGAGGCCTGGGACCTCAGAGGGTGGAGTGGCTCTTCTGGCTaGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGAATGGTA | + |
Preference number: 1 (lower is better) Translates to: LQEAWDLRGWSGSSG*GFAISQRTCWVRMV Trigger: TACCATTCTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTCCACCCTCTGAGGTCCCAGGCCTCTTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | GAGAGATGGCTCAGAGCAACTGCTGCTCTCGTAGTGGATCTGGGCTaGGGTTGGGTTCCTAGCTCACAACTCTGCGGGACCACAGTTCCG | + |
Preference number: 1 (lower is better) Translates to: ERWLRATAALVVDLG*GWVPSSQLCGTTVP Trigger: CGGAACTGTGGTCCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGCAGCAGTTGCTCTGAGCCATCTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | GCAGCCACCAAGGGACACGTGCTCAACCACAAGTCAAGTGCTCTGTaGCCTACTGGGCACAGAACAAGCCGAGCAGGTGAAGAGCTTGAC | + |
Preference number: 1 (lower is better) Translates to: AATKGHVLNHKSSAL*PTGHRTSRAGEELD Trigger: GTCAAGCTCTTCACCTGCTCGGCTTGTTCTGTGCCCAGTAGGTCACAGAGCACTTGACTTGTGGTTGAGCACGTGTCCCTTGGTGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | GGCCTGGGACCTCAGAGGGTGGAGTGGCTCTTCTGGCTGGGGGTTTaGAATCTCACAGAGGACCTGCTGGGTCAGAATGGTAGTAAACAT | + |
Preference number: 1 (lower is better) Translates to: GLGPQRVEWLFWLGV*NLTEDLLGQNGSKH Trigger: ATGTTTACTACCATTCTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTCCACCCTCTGAGGTCCCAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTTTGCCTCCCAAGTGTTGGGATTAAAGGCGGGCACCACCAC | + |
Preference number: 1 (lower is better) Translates to: NSLCRPGWPRTQKSA*LCLPSVGIKGGHHH Trigger: GTGGTGGTGCCCGCCTTTAATCCCAACACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | TTGCATATACATAGCAGAAAAGTGTGGCCTGCCCTGCAAGAGGCCTaGGACCTCAGAGGGTGGAGTGGCTCTTCTGGCTGGGGGTTTGCA | + |
Preference number: 1 (lower is better) Translates to: LHIHSRKVWPALQEA*DLRGWSGSSGWGFA Trigger: TGCAAACCCCCAGCCAGAAGAGCCACTCCACCCTCTGAGGTCCCAGGCCTCTTGCAGGGCAGGCCACACTTTTCTGCTATGTATATGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | TGGTGGCTAGAGCGTTCACCCACTGAGCCACCTCACTGGTCCTTCTaGTCCCTTCATAGTTGTAGGGCTGTGGGATCAGGTGGGTCTCTT | + |
Preference number: 1 (lower is better) Translates to: WWLERSPTEPPHWSF*SLHSCRAVGSGGSL Trigger: AAGAGACCCACCTGATCCCACAGCCCTACAACTATGAAGGGACCAGAAGGACCAGTGAGGTGGCTCAGTGGGTGAACGCTCTAGCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | CCCTTTAATCCCAGCACTTGGCTAGCAGAGGCAGGAGGGTCTCTGTaGGTTCGAGGCCAGCCTGGTCTACAAATTGAGTCCAGGACAGAC | + |
Preference number: 1 (lower is better) Translates to: PFNPSTWLAEAGGSL*VRGQPGLQIESRTD Trigger: GTCTGTCCTGGACTCAATTTGTAGACCAGGCTGGCCTCGAACTCACAGAGACCCTCCTGCCTCTGCTAGCCAAGTGCTGGGATTAAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | ACTACTGTCACTCCTAAGCACATAGGGTTCAAGGTGTTGAAGCTCTaGGCAGCTCTGAGAGCTGGCTGGAGAGAGAGATGCTGGGCAGAC | + |
Preference number: 1 (lower is better) Translates to: TTVTPKHIGFKVLKL*AALRAGWRERCWAD Trigger: GTCTGCCCAGCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCAGAGCTTCAACACCTTGAACCCTATGTGCTTAGGAGTGACAGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | GCCTTTAACTCCAAGGGTAAAGCTTGTGGGGTGGTGGGGAAGACTTaGGGACCCAGAACTGTAACTCTGCAGCACAAGACAGAGACACCC | + |
Preference number: 1 (lower is better) Translates to: AFNSKGKACGVVGKT*GPRTVTLQHKTETP Trigger: GGGTGTCTCTGTCTTGTGCTGCAGAGTTACAGTTCTGGGTCCTCAAGTCTTCCCCACCACCCCACAAGCTTTACCCTTGGAGTTAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | GTGTTGAAGCTCTGGGCAGCTCTGAGAGCTGGCTGGAGAGAGAGATaGTGGGCAGACCATCACTTTAGGCAGTATGTACGTTTCTGGGTT | + |
Preference number: 1 (lower is better) Translates to: VLKLWAALRAGWRER*WADHHFRQYVRFWV Trigger: AACCCAGAAACGTACATACTGCCTAAAGTGATGGTCTGCCCAGCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCAGAGCTTCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | AATAGAAGGCATTGCATATACATAGCAGAAAAGTGTGGCCTGCCCTaGAAGAGGCCTGGGACCTCAGAGGGTGGAGTGGCTCTTCTGGCT | + |
Preference number: 1 (lower is better) Translates to: NRRHCIYIAEKCGLP*KRPGTSEGGVALLA Trigger: AGCCAGAAGAGCCACTCCACCCTCTGAGGTCCCAGGCCTCTTGCAGGGCAGGCCACACTTTTCTGCTATGTATATGCAATGCCTTCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | TTGAAGCTCTGGGCAGCTCTGAGAGCTGGCTGGAGAGAGAGATGCTaGGCAGACCATCACTTTAGGCAGTATGTACGTTTCTGGGTTGTC | + |
Preference number: 1 (lower is better) Translates to: LKLWAALRAGWRERC*ADHHFRQYVRFWVV Trigger: GACAACCCAGAAACGTACATACTGCCTAAAGTGATGGTCTGCCCAGCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCAGAGCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | AGGAGGTGGGAGACTATCTTGAGAGATACAGGCAAGCAGGAAGTGTaGCATATACCAGTGGAAGGGGCCTGCCATCTCTCTTCCAGACAG | + |
Preference number: 1 (lower is better) Translates to: RRWETILRDTGKQEV*HIPVEGACHLSSRQ Trigger: CTGTCTGGAAGAGAGATGGCAGGCCCCTTCCACTGGTATATGTCACACTTCCTGCTTGCCTGTATCTCTCAAGATAGTCTCCCACCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | CCCCCTCAAAGACTGTCCAGTAAGCACCTGAGAACTGACTTTTCTTaGAACAGGGTGCTGGCAAGATCTGTCAGGGCCAAGGCAACAATG | + |
Preference number: 1 (lower is better) Translates to: PPQRLSSKHLRTDFS*NRVLARSVRAKATM Trigger: CATTGTTGCCTTGGCCCTGACAGATCTTGCCAGCACCCTGTTCCAAGAAAAGTCAGTTCTCAGGTGCTTACTGGACAGTCTTTGAGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | ATCAACAAAGCCAGAATCTCTGCACCAGACCATTTCCTTGCTTCATaGGGAAACCAAGGCTCAGGCCCAGTGTGTAGAGTCCTGGTTGGC | + |
Preference number: 1 (lower is better) Translates to: INKARISAPDHFLAS*GNQGSGPVCRVLVG Trigger: GCCAACCAGGACTCTACACACTGGGCCTGAGCCTTGGTTTCCCCATGAAGCAAGGAAATGGTCTGGTGCAGAGATTCTGGCTTTGTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | ATAGGGTTCAAGGTGTTGAAGCTCTGGGCAGCTCTGAGAGCTGGCTaGAGAGAGAGATGCTGGGCAGACCATCACTTTAGGCAGTATGTA | + |
Preference number: 1 (lower is better) Translates to: IGFKVLKLWAALRAG*RERCWADHHFRQYV Trigger: TACATACTGCCTAAAGTGATGGTCTGCCCAGCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCAGAGCTTCAACACCTTGAACCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | TACTCAACCAAAGAAGCAGTGATCTCCTCCCACAGAGGCAAGAACTaGCTGCAAGAACCTCATGATGCTAGCCTTCAATGTGGCGCCTGC | + |
Preference number: 1 (lower is better) Translates to: YSTKEAVISSHRGKN*LQEPHDASLQCGAC Trigger: GCAGGCGCCACATTGAAGGCTAGCATCATGAGGTTCTTGCAGTCAGTTCTTGCCTCTGTGGGAGGAGATCACTGCTTCTTTGGTTGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | CTGGAGCCTGTAAACGGATGGGGTGAGTCTCTGTTCACAATCTCATaGCCACCTTGTTCCCTGACACTTTGGCCACCTCAACAGAAAAAC | + |
Preference number: 1 (lower is better) Translates to: LEPVNGWGESLFTIS*PPCSLTLWPPQQKN Trigger: GTTTTTCTGTTGAGGTGGCCAAAGTGTCAGGGAACAAGGTGGCCATGAGATTGTGAACAGAGACTCACCCCATCCGTTTACAGGCTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | ACTCAGGAGGCAGTAGCAGGCAGATCTCTGACTCTGAGGCTAGCCTaGAGTTCCAGAACAGCCAGGGCTACACAGAGAAATTCTTTTTCT | + |
Preference number: 1 (lower is better) Translates to: TQEAVAGRSLTLRLA*SSRTARATQRNSFS Trigger: AGAAAAAGAATTTCTCTGTGTAGCCCTGGCTGTTCTGGAACTCCAGGCTAGCCTCAGAGTCAGAGATCTGCCTGCTACTGCCTCCTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | GCTGCACAGGGCACAGGTTACTTTCTGCACCTCTGTAGGACTCTATaGAGTGCCAACACCTCTTGTACCCACCAAAGATTGTCAATGCCA | + |
Preference number: 1 (lower is better) Translates to: AAQGTGYFLHLCRTL*SANTSCTHQRLSMP Trigger: TGGCATTGACAATCTTTGGTGGGTACAAGAGGTGTTGGCACTCCATAGAGTCCTACAGAGGTGCAGAAAGTAACCTGTGCCCTGTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | CCCACATGTACAGAAAGTGCCCTGAATAAAGTATACCCAGCTGCCTaGTGGGCTATCCTGACTACTGTCACTCCTAAGCACATAGGGTTC | + |
Preference number: 1 (lower is better) Translates to: PTCTESALNKVYPAA*WAILTTVTPKHIGF Trigger: GAACCCTATGTGCTTAGGAGTGACAGTAGTCAGGATAGCCCAGCAGGCAGCTGGGTATACTTTATTCAGGGCACTTTCTGTACATGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | ATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCGGGACCTTCAGAAGAGCCAGTCAATGCTCTTAACCGCT | + |
Preference number: 1 (lower is better) Translates to: ISLWMVVSHHVVAGI*TRDLQKSQSMLLTA Trigger: AGCGGTTAAGAGCATTGACTGGCTCTTCTGAAGGTCCCGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | GATCAGGTGGGTCTCTTGATGACCTCAGCTCCATCCAAAGCTCCTTaGAAAGCACCACAAGAGTCTCTCCCATTTCAACTTTTGTGTGCA | + |
Preference number: 1 (lower is better) Translates to: DQVGLLMTSAPSKAP*KAPQESLPFQLLCA Trigger: TGCACACAAAAGTTGAAATGGGAGAGACTCTTGTGGTGCTTTTCAAGGAGCTTTGGATGGAGCTGAGGTCATCAAGAGACCCACCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | ACATGTACAGAAAGTGCCCTGAATAAAGTATACCCAGCTGCCTGCTaGGCTATCCTGACTACTGTCACTCCTAAGCACATAGGGTTCAAG | + |
Preference number: 1 (lower is better) Translates to: TCTESALNKVYPAAC*AILTTVTPKHIGFK Trigger: CTTGAACCCTATGTGCTTAGGAGTGACAGTAGTCAGGATAGCCCAGCAGGCAGCTGGGTATACTTTATTCAGGGCACTTTCTGTACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | TATGATCTAACCCAGGAGTCAGCTAAGATTCCTTTATGGCAATACTaGGACATGCATAAAAGGAAACCAAGCCGGGCGTGGTGGCGCATA | + |
Preference number: 1 (lower is better) Translates to: YDLTQESAKIPLWQY*DMHKRKPSRAWWRI Trigger: TATGCGCCACCACGCCCGGCTTGGTTTCCTTTTATGCATGTCCCAGTATTGCCATAAAGGAATCTTAGCTGACTCCTGGGTTAGATCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | GTTTTCCGAGACCTGCTTAATGAGAACTGCTCCTTACTGCGCAAATaGTATGTGCCAATGAATACTCTTCTCCGTGTGCATCTGGTGAGC | + |
Preference number: 1 (lower is better) Translates to: VFRDLLNENCSLLRK*YVPMNTLLRVHLVS Trigger: GCTCACCAGATGCACACGGAGAAGAGTATTCATTGGCACATACCATTTGCGCAGTAAGGAGCAGTTCTCATTAAGCAGGTCTCGGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | AAATCCAGAAGTCACAGTTGTTTGTCCCTAGAAGTCCTACAGCACTaGACTTGGTCTTTACACCAGGCTACCAGCCAGCAAAAGGCTCTA | + |
Preference number: 1 (lower is better) Translates to: KSRSHSCLSLEVLQH*TWSLHQATSQQKAL Trigger: TAGAGCCTTTTGCTGGCTGGTAGCCTGGTGTAAAGACCAAGTTCAGTGCTGTAGGACTTCTAGGGACAAACAACTGTGACTTCTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | CCCAGATCATGGGTTTTTGAGAAATTAGAAAGCACAAATACAGACTaGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACAATATCCAT | + |
Preference number: 1 (lower is better) Translates to: PRSWVFEKLESTNTD*HPCIPRCQGLDNIH Trigger: ATGGATATTGTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTCTAATTTCTCAAAAACCCATGATCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | ACGTATCTCTCAAGTAAAAATTTGCCCCCACTACAATGTGTAGAATaGAGAGGGAGGGTTGAGAGAAGCTGCCGCAGAAAGGAAAGACAG | + |
Preference number: 1 (lower is better) Translates to: TYLSSKNLPPLQCVE*RGRVERSCRRKERQ Trigger: CTGTCTTTCCTTTCTGCGGCAGCTTCTCTCAACCCTCCCTCTTCATTCTACACATTGTAGTGGGGGCAAATTTTTACTTGAGAGATACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | TTGAACTCGGGACCTTCAGAAGAGCCAGTCAATGCTCTTAACCGCTaGGCCATCTCTCCAGCCCAGAAGTTTGAAATTTTATTCCAGAAA | + |
Preference number: 1 (lower is better) Translates to: LNSGPSEEPVNALNR*AISPAQKFEILFQK Trigger: TTTCTGGAATAAAATTTCAAACTTCTGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCATTGACTGGCTCTTCTGAAGGTCCCGAGTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | CATTCCCAGGTGCCAAGGGCTGGACAATATCCATCTCCAAATTCCTaGATCCAAGATCTACACCTCAATTCGACTAGACTTAGACACTTG | + |
Preference number: 1 (lower is better) Translates to: HSQVPRAGQYPSPNS*IQDLHLNSTRLRHL Trigger: CAAGTGTCTAAGTCTAGTCGAATTGAGGTGTAGATCTTGGATTCAGGAATTTGGAGATGGATATTGTCCAGCCCTTGGCACCTGGGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | ACAGTTTTGTTACGACTTAGTTCTGAAGTCTTCTGCTTCTTCATGTaGATCACTGTTCATTCACAGTGTAGGCAGCCACCAAGGGACACG | + |
Preference number: 1 (lower is better) Translates to: TVLLRLSSEVFCFFM*ITVHSQCRQPPRDT Trigger: CGTGTCCCTTGGTGGCTGCCTACACTGTGAATGAACAGTGATGCACATGAAGAAGCAGAAGACTTCAGAACTAAGTCGTAACAAAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | AACAGCATTCCGGGACAGACAGACAGAGGAAGCCTACAACACAAATaGGCAACTATTATCCTGACCAGACACTACATATTTCTGACCTTG | + |
Preference number: 1 (lower is better) Translates to: NSIPGQTDRGSLQHK*ATIILTRHYIFLTL Trigger: CAAGGTCAGAAATATGTAGTGTCTGGTCAGGATAATAGTTGCTCATTTGTGTTGTAGGCTTCCTCTGTCTGTCTGTCCCGGAATGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | TGGGTTTTTGAGAAATTAGAAAGCACAAATACAGACTGGCACCCTTaGATTCCCAGGTGCCAAGGGCTGGACAATATCCATCTCCAAATT | + |
Preference number: 1 (lower is better) Translates to: WVFEKLESTNTDWHP*IPRCQGLDNIHLQI Trigger: AATTTGGAGATGGATATTGTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTCTAATTTCTCAAAAACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | CACAATTCATTCACTTCGCAGATACTTCCGAAGCACTGCTTACACTaGCTAGACTGGCCTGGTTCAGTGATAATGAGAAAACATGAAGAC | + |
Preference number: 1 (lower is better) Translates to: HNSFTSQILPKHCLH*LDWPGSVIMRKHED Trigger: GTCTTCATGTTTTCTCATTATCACTGAACCAGGCCAGTCTAGTCAGTGTAAGCAGTGCTTCGGAAGTATCTGCGAAGTGAATGAATTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | AGATCATTAACAGCTGACGTTTTCCGAGACCTGCTTAATGAGAACTaGTCCTTACTGCGCAAATGGTATGTGCCAATGAATACTCTTCTC | + |
Preference number: 1 (lower is better) Translates to: RSLTADVFRDLLNEN*SLLRKWYVPMNTLL Trigger: GAGAAGAGTATTCATTGGCACATACCATTTGCGCAGTAAGGAGCAGTTCTCATTAAGCAGGTCTCGGAAAACGTCAGCTGTTAATGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | CAGGTGAAGAGCTTGACATCCCAAAGGCATGCTTATGCACTCAAGTaGAACACCACTTTTAAGCCTGTAGAGCAATACAGTATTAAATAC | + |
Preference number: 1 (lower is better) Translates to: QVKSLTSQRHAYALK*NTTFKPVEQYSIKY Trigger: GTATTTAATACTGTATTGCTCTACAGGCTTAAAAGTGGTGTTTCACTTGAGTGCATAAGCATGCCTTTGGGATGTCAAGCTCTTCACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 90 bp | ACAGATGGACAGCAGTTTCTTTCCTACAGTGGCCACAAAGCAAGTTaGACTCAAGTACAACAGACCATACAATTGGTACCATTCAAAATA | + |
Preference number: 1 (lower is better) Translates to: TDGQQFLSYSGHKAS*TQVQQTIQLVPFKI Trigger: TATTTTGAATGGTACCAATTGTATGGTCTGTTGTACTTGAGTTCAACTTGCTTTGTGGCCACTGTAGGAAAGAAACTGCTGTCCATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | GCCTTGGGATTTCCAAGAGGTATTTTGATTACTCAATTTTTACCTTaGGCATTGACTTATGATCTAACCCAGGAGTCAGCTAAGATTCCT | + |
Preference number: 1 (lower is better) Translates to: ALGFPRGILITQFLP*ALTYDLTQESAKIP Trigger: AGGAATCTTAGCTGACTCCTGGGTTAGATCATAAGTCAATGCCCAAGGTAAAAATTGAGTAATCAAAATACCTCTTGGAAATCCCAAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 90 bp | ACACACTTCAAATTAGTAAACAATATTGGTGAAGACTTGATAAACTaGAATCCTGATATCCTCCATGGGAACACAGCTTGGCAATTCCTC | + |
Preference number: 1 (lower is better) Translates to: THFKLVNNIGEDLIN*NPDILHGNTAWQFL Trigger: GAGGAATTGCCAAGCTGTGTTCCCATGGAGGATATCAGGATTCCAGTTTATCAAGTCTTCACCAATATTGTTTACTAATTTGAAGTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 90 bp | TCTGTAAATAGACGACAATCAAATGTACACTGTACAAGGATAAACTaGATACTATGTACGTATCTCTCAAGTAAAAATTTGCCCCCACTA | + |
Preference number: 1 (lower is better) Translates to: SVNRRQSNVHCTRIN*ILCTYLSSKNLPPL Trigger: TAGTGGGGGCAAATTTTTACTTGAGAGATACGTACATAGTATGCAGTTTATCCTTGTACAGTGTACATTTGATTGTCGTCTATTTACAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGGGGCCAAGGCAACAATaGGAAGTTCAGTTCTCGGCT | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGGPRQQ*EVQFSA Trigger: AGCCGAGAACTGAACTTCTCATTGTTGCCTTGGCCC...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGAGTAGTTGCCAGGTCTaGGGAGAGGTGAAGGAGGAC | + |
Preference number: 2 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQSSCQV*GEVKED Trigger: GTCCTCCTTCACCTCTCCTCAGACCTGGCAACTACT...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTAAGGGCGCCAGCTCCTaGAAGGGAGGTTCCCACTGC | + |
Preference number: 2 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLKGASS*KGGSHC Trigger: GCAGTGGGAACCTCCCTTGCAGGAGCTGGCGCCCTT...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGAGAATGAAAACACGCTaGGTGTGGTGGTGCACCCCT | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGRMKTR*VWWCTP Trigger: AGGGGTGCACCACCACACCCAGCGTGTTTTCATTCT...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGGCCACTGCTGACTGCTaGTGCAAGCATATCTACTCG | + |
Preference number: 2 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQATADC*CKHIYS Trigger: CGAGTAGATATGCTTGCAGCAGCAGTCAGCAGTGGC...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGAGGGTTGAGAGAAGCTaGCGCAGAAAGGAAAGACAG | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGRVERS*RRKERQ Trigger: CTGTCTTTCCTTTCTGCGGCAGCTTCTCTCAACCCT...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGGTAAAGCTTGTGGGGTaGTGGGGAAGACTTGAGGAC | + |
Preference number: 2 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQVKLVG*WGRLED Trigger: GTCCTCAAGTCTTCCCCACCACCCCACAAGCTTTAC...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGTGTAAACGGATGGGGTaGGTCTCTGTTCACAATCTC | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGCKRMG*VSVHNL Trigger: GAGATTGTGAACAGAGACTCACCCCATCCGTTTACA...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GAAAGCACAAATACAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACGCCTGGTGTACAAACTaGGTTCCAGGACAGCCAAGG | + |
Preference number: 2 (lower is better) Translates to: ESTNTDWHPCIPRCQGLDAWCTN*VPGQPR Trigger: CCTTGGCTGTCCTGGAACTCAGTTTGTACACCAGGC...GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGCAGATCATTAACAGCTaGCGTTTTCCGAGACCTGCT | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGQIINS*RFPRPA Trigger: AGCAGGTCTCGGAAAACGTCAGCTGTTAATGATCTG...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTAAGCTTGTGGGGTGGTaGGGAAGACTTGAGGACCCA | + |
Preference number: 2 (lower is better) Translates to: SQHLGSRASSVNSRPACSKLVGW*GRLEDP Trigger: TGGGTCCTCAAGTCTTCCCCACCACCCCACAAGCTT...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGCTAAGGGACTGTGGATaGAGCCCAGTGGTACAATAC | + |
Preference number: 2 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQLRDCG*SPVVQY Trigger: GTATTGTACCACTGGGCTCCATCCACAGTCCCTTAG...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGTTTAATCCCAGCACTTaGGAGGCAGAGGCAGATGAA | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGFNPST*EAEADE Trigger: TTCATCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | AGTAAGAGTACAGCGAGGTGTGCTGGGCTCGGGGCATGTGGTTTGCATTATACGCCAAGCCGGGCGTGGTaGCGCATACCTTTAATCCCA | + |
Preference number: 2 (lower is better) Translates to: SKSTARCAGLGACGLHYTPSRAW*RIPLIP Trigger: TGGGATTAAAGGTATGCGCCACCACGCCCGGCTTGG...CGTATAATGCAAACCACATGCCCCGAGCCCAGCACACCTCGCTGTACTCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GAAAGCACAAATACAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACCATAGCAGAAAAGTGTaGCCTGCCCTGCAAGAGGCC | + |
Preference number: 2 (lower is better) Translates to: ESTNTDWHPCIPRCQGLDHSRKV*PALQEA Trigger: GGCCTCTTGCAGGGCAGGCCACACTTTTCTGCTATG...GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | GCCCATCACTGCTTCAAAGCCCAGCTCCCCCTGATCCAAGGACATTaGGTAGAGCCACTAAAGGATTCTCTATCCCTGGCCCATGGGGAA | + |
Preference number: 2 (lower is better) Translates to: AHHCFKAQLPLIQGH*VEPLKDSLSLAHGE Trigger: TTCCCCATGGGCCAGGGATAGAGAATCCTTTAGTGGCTCTACCAAATGTCCTTGGATCAGGGGGAGCTGGGCTTTGAAGCAGTGATGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGTGTCCAGTAAGCACCTaGGAACTGACTTTTCTTGGA | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGCPVST*ELTFLG Trigger: TCCAAGAAAAGTCAGTTCTCAGGTGCTTACTGGACA...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GAAAGCACAAATACAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACATGAAGAGGGAGGGTTaGGAGAAGCTGCCGCAGAAA | + |
Preference number: 2 (lower is better) Translates to: ESTNTDWHPCIPRCQGLDMKREG*EKLPQK Trigger: TTTCTGCGGCAGCTTCTCTCAACCCTCCCTCTTCAT...GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GAAAGCACAAATACAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACTGGCTCTGGCTGTCCTaGAACTCACTCTGTAGACCA | + |
Preference number: 2 (lower is better) Translates to: ESTNTDWHPCIPRCQGLDWLWLS*NSLCRP Trigger: TGGTCTACAGAGTGAGTTCCAGGACAGCCAGAGCCA...GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | GCTATCCTGACTACTGTCACTCCTAAGCACATAGGGTTCAAGGTGTaGAAGCTCTGGGCAGCTCTGAGAGCTGGCTGGAGAGAGAGATGC | + |
Preference number: 2 (lower is better) Translates to: AILTTVTPKHIGFKV*KLWAALRAGWRERC Trigger: GCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCAGAGCTTCAACACCTTGAACCCTATGTGCTTAGGAGTGACAGTAGTCAGGATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GAAAGCACAAATACAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACAAGCACTGCTTACACTaGCTAGACTGGCCTGGTTCA | + |
Preference number: 2 (lower is better) Translates to: ESTNTDWHPCIPRCQGLDKHCLH*LDWPGS Trigger: TGAACCAGGCCAGTCTAGTCAGTGTAAGCAGTGCTT...GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTGAAGCCACTGCTGACTaGTGCTGCAAGCATATCTAC | + |
Preference number: 2 (lower is better) Translates to: SQHLGSRASSVNSRPACSEATAD*CCKHIY Trigger: GTAGATATGCTTGCAGCAGCAGTCAGCAGTGGCTTC...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTGAGCCACCATGTGGTTaGTGGGATTTGAACTCGGGA | + |
Preference number: 2 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLEPPCG*WDLNSG Trigger: TCCCGAGTTCAAATCCCAGCAACCACATGGTGGCTC...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGGACATGGTTCTAAATTaGAGGGCCAACTACTTTACC | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGDMVLN*RANYFT Trigger: GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTC...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | ACTAAGCCCCAGAGAGGAAGGGGCAAGTTCCATCTTCCAGTGGTGAATATCAGAGGACATCCTGTGTCCTaGTGCTGCTCCTATAGCCCG | + |
Preference number: 2 (lower is better) Translates to: TKPQRGRGKFHLPVVNIRGHPVS*CCSYSP Trigger: CGGGCTATAGGAGCAGCAGCAGGACACAGGATGTCC...TCTGATATTCACCACTGGAAGATGGAACTTGCCCCTTCCTCTCTGGGGCTTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCACCACACTAAGGCCCTaGAAGGCTGAGCTGGCAGCT | + |
Preference number: 2 (lower is better) Translates to: VFRHPRRGHQISLWMVVSTTLRP*KAELAA Trigger: AGCTGCCAGCTCAGCCTTCCAGGGCCTTAGTGTGGT...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | AGTAAGAGTACAGCGAGGTGTGCTGGGCTCGGGGCATGTGGTTTGCATTATACGAAGTCAAGTGCTCTGTaGCCTACTGGGCACAGAACA | + |
Preference number: 2 (lower is better) Translates to: SKSTARCAGLGACGLHYTKSSAL*PTGHRT Trigger: TGTTCTGTGCCCAGTAGGTCACAGAGCACTTGACTT...CGTATAATGCAAACCACATGCCCCGAGCCCAGCACACCTCGCTGTACTCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGAAGGGGCCATTTGAATaGCATGGTTCTAAATTGCAG | + |
Preference number: 2 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQKGPFE*HGSKLQ Trigger: CTGCAATTTAGAACCATGTCATTCAAATGGCCCCTT...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTACCAGACCATTTCCTTaGTTCATGGGGAAACCAAGG | + |
Preference number: 2 (lower is better) Translates to: SQHLGSRASSVNSRPACSTRPFP*FMGKPR Trigger: CCTTGGTTTCCCCATGAAGCAAGGAAATGGTCTGGT...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGCTCAACAGAAAAACATaGTGCAGCCACAACTTCCAA | + |
Preference number: 2 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQLNRKT*CSHNFQ Trigger: TTGGAAGTTGTGGCTGCAGCATGTTTTTCTGTTGAG...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGAATGTCTACAAAATCTaGAGGGTTGCCTTTAACTCC | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGNVYKI*RVAFNS Trigger: GGAGTTAAAGGCAACCCTCCAGATTTTGTAGACATT...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCTACCCAGCTGCCTGCTaGGCTATCCTGACTACTGTC | + |
Preference number: 2 (lower is better) Translates to: VFRHPRRGHQISLWMVVSYPAAC*AILTTV Trigger: GACAGTAGTCAGGATAGCCCAGCAGGCAGCTGGGTA...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTACAAAACAAACCCACTaGCAGGCACAGTGCCACACA | + |
Preference number: 2 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLTKQTH*QAQCHT Trigger: TGTGTGGCACTGTGCCTGCCAGTGGGTTTGTTTTGT...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | ACTAAGCCCCAGAGAGGAAGGGGCAAGTTCCATCTTCCAGTGGTGAATATCAGAGTAGTGGATCTGGGCTaGGGTTGGGTTCCTAGCTCA | + |
Preference number: 2 (lower is better) Translates to: TKPQRGRGKFHLPVVNIRVVDLG*GWVPSS Trigger: TGAGCTAGGAACCCAACCCCAGCCCAGATCCACTAC...TCTGATATTCACCACTGGAAGATGGAACTTGCCCCTTCCTCTCTGGGGCTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | CTTCATGGGGAAACCAAGGCTCAGGCCCAGTGTGTAGAGTCCTGGTaGGCATCCAGGTCTCTGTTCTCAGGCCATTTTTCTTCTTACTCT | + |
Preference number: 2 (lower is better) Translates to: LHGETKAQAQCVESW*ASRSLFSGHFSSYS Trigger: AGAGTAAGAAGAAAAATGGCCTGAGAACAGAGACCTGGATGCCAACCAGGACTCTACACACTGGGCCTGAGCCTTGGTTTCCCCATGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTCTACAATGTGTAGAATaGAGAGGGAGGGTTGAGAGA | + |
Preference number: 2 (lower is better) Translates to: SQHLGSRASSVNSRPACSLQCVE*RGRVER Trigger: TCTCTCAACCCTCCCTCTTCATTCTACACATTGTAG...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | ACTAAGCCCCAGAGAGGAAGGGGCAAGTTCCATCTTCCAGTGGTGAATATCAGAATTCCCAGGGCTGGATaGGCTCCAGCTTCGATGTTT | + |
Preference number: 2 (lower is better) Translates to: TKPQRGRGKFHLPVVNIRIPRAG*APASMF Trigger: AAACATCGAAGCTGGAGCTCATCCAGCCCTGGGAAT...TCTGATATTCACCACTGGAAGATGGAACTTGCCCCTTCCTCTCTGGGGCTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGGTTTTGAATACATACTaGCTACCTTCCATAAAGTCC | + |
Preference number: 2 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGVLNTY*LPSIKS Trigger: GGACTTTATGGAAGGTAGGCAGTATGTATTCAAAAC...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | GATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCGGGACCTTCAGAAGAGCCAGTCAATGCTCTTAACCGC | + |
Preference number: 2 (lower is better) Translates to: DLIMDGCEPPCGCWD*NSGPSEEPVNALNR Trigger: GCGGTTAAGAGCATTGACTGGCTCTTCTGAAGGTCCCGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | TTAGCAACAGGACCAGGGGCTAAGAATCGGTTCGGTGTTCCCTCTTaGGGGTCTCTTACTTATCAGCCAGACTTCTTTCCTCCTATCCTG | + |
Preference number: 2 (lower is better) Translates to: LATGPGAKNRFGVPS*GSLTYQPDFFPPIL Trigger: CAGGATAGGAGGAAAGAAGTCTGGCTGATAAGTAAGAGACCCCAAAGAGGGAACACCGAACCGATTCTTAGCCCCTGGTCCTGTTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | TTGTTCCAATCCCAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTaGAAGATGAGCTCCACAAGGAGTCAGGGGCAGGCAGACCCAAGG | + |
Preference number: 2 (lower is better) Translates to: LFQSQPAFPQKVEEY*KMSSTRSQGQADPR Trigger: CCTTGGGTCTGCCTGCCCCTGACTCCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTGGGATTGGAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | GGAATTATGATAGAGGAGGGCCAGAGGCCATCAGGCCCCTCTACAAAGAAGAGTGGCCACAAAGCAAGTTaGACTCAAGTACAACAGACC | + |
Preference number: 2 (lower is better) Translates to: GIMIEEGQRPSGPSTKKSGHKAS*TQVQQT Trigger: GGTCTGTTGTACTTGAGTTCAACTTGCTTTGTGGCC...ACTCTTCTTTGTAGAGGGGCCTGATGGCCTCTGGCCCTCCTCTATCATAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTTACTCTACCAAAGTCTaGACCTCTAAGAACCTGACT | + |
Preference number: 2 (lower is better) Translates to: SQHLGSRASSVNSRPACSYSTKV*TSKNLT Trigger: AGTCAGGTTCTTAGAGGTTCAGACTTTGGTAGAGTA...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTGTACAGAAAGTGCCCTaGATAAAGTATACCCAGCTG | + |
Preference number: 2 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLVQKVP*IKYTQL Trigger: CAGCTGGGTATACTTTATTCAGGGCACTTTCTGTAC...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | ATAGGCAAATCCACAAGGACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGCTTGGAACAGGGTGCTaGCAAGATCTGTCAGGGCCA | + |
Preference number: 2 (lower is better) Translates to: IGKSTRTERLVVARSEERLGTGC*QDLSGP Trigger: TGGCCCTGACAGATCTTGCCAGCACCCTGTTCCAAG...CCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGTCCTTGTGGATTTGCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCCATTTCCTTGCTTCATaGGGAAACCAAGGCTCAGGC | + |
Preference number: 2 (lower is better) Translates to: VFRHPRRGHQISLWMVVSHFLAS*GNQGSG Trigger: GCCTGAGCCTTGGTTTCCCCATGAAGCAAGGAAATG...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGGGCAGCTCTGAGAGCTaGCTGGAGAGAGAGATGCTG | + |
Preference number: 2 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRGSSES*LEREML Trigger: CAGCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCC...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCTTTAATCCCAGCACCTaGGAAGCAGAGCTTCCTCTG | + |
Preference number: 2 (lower is better) Translates to: VFRHPRRGHQISLWMVVSFNPST*EAELPL Trigger: CAGAGGAAGCTCTGCTTCCCAGGTGCTGGGATTAAA...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGCCTTTATGGCAATACTaGGACATGCATAAAAGGAAA | + |
Preference number: 2 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQPLWQY*DMHKRK Trigger: TTTCCTTTTATGCATGTCCCAGTATTGCCATAAAGG...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR CAA 90 bp | CATATACCAGTGGAAGGGGCCTGCCATCTCTCTTCCAGACAGAAGTaGTTCCAATCCCAGCCAGCCTTTCCTCAAAAAGTGGAAGAATAT | + |
Preference number: 2 (lower is better) Translates to: HIPVEGACHLSSRQK*FQSQPAFPQKVEEY Trigger: ATATTCTTCCACTTTTTGAGGAAAGGCTGGCTGGGATTGGAACAACTTCTGTCTGGAAGAGAGATGGCAGGCCCCTTCCACTGGTATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR TCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGGTGGTGGGGAAGACTTaGGGACCCAGAACTGTAACT | + |
Preference number: 2 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRVVGKT*GPRTVT Trigger: AGTTACAGTTCTGGGTCCTCAAGTCTTCCCCACCAC...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCTGCTCTGTGACCTACTaGGCACAGAACAAGCCGAGC | + |
Preference number: 2 (lower is better) Translates to: IRGHLNDMVLNCRANYFTCSVTY*AQNKPS Trigger: GCTCGGCTTGTTCTGTGCCCAGTAGGTCACAGAGCA...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR CCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGCCACCATGTGGTTGCTaGGATTTGAACTCGGGACCT | + |
Preference number: 2 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRPPCGC*DLNSGP Trigger: AGGTCCCGAGTTCAAATCCCAGCAACCACATGGTGG...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | CAGAAGTCACAGTTGTTTGTCCCTAGAAGTCCTACAGCACTGAACTaGGTCTTTACACCAGGCTACCAGCCAGCAAAAGGCTCTAAAAGA | + |
Preference number: 2 (lower is better) Translates to: QKSQLFVPRSPTALN*VFTPGYQPAKGSKR Trigger: TCTTTTAGAGCCTTTTGCTGGCTGGTAGCCTGGTGTAAAGACCAAGTTCAGTGCTGTAGGACTTCTAGGGACAAACAACTGTGACTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR CAA 90 bp | ATGCTGCTCAAGGGCATCTTTCCTGGTCAGCTCAAGGAGTTAGTTTaGAATACATACTGCCTACCTTCCATAAAGTCCTCCCCTCATCTC | + |
Preference number: 2 (lower is better) Translates to: MLLKGIFPGQLKELV*NTYCLPSIKSSPHL Trigger: GAGATGAGGGGAGGACTTTATGGAAGGTAGGCAGTATGTATTCAAAACTAACTCCTTGAGCTGACCAGGAAAGATGCCCTTGAGCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | ATGCTGGGACCCTCTCAGACTTCTAGCATTTCCATCTGTGATATCTaGTTACAGCTGCCCAAGCAAATGGACATCTTAGGCTACCTTCTC | + |
Preference number: 2 (lower is better) Translates to: MLGPSQTSSISICDI*LQLPKQMDILGYLL Trigger: GAGAAGGTAGCCTAAGATGTCCATTTGCTTGGGCAGCTGTAACAAGATATCACAGATGGAAATGCTAGAAGTCTGAGAGGGTCCCAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTTCCAGCCCAGAAGTTTaGAATTTTATTCCAGAAACA | + |
Preference number: 2 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLSSPEV*NFIPET Trigger: TGTTTCTGGAATAAAATTTCAAACTTCTGGGCTGGA...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGAGGCAGATGAATTTCTaGGTTCTAGGCCAGCCTGGT | + |
Preference number: 2 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRRQMNF*VLGQPG Trigger: ACCAGGCTGGCCTAGAACTCAGAAATTCATCTGCCT...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCCTTCAATGTGGCGCCTaGCTTGGGATTTCCAAGAGG | + |
Preference number: 2 (lower is better) Translates to: IRGHLNDMVLNCRANYFTLQCGA*LGISKR Trigger: CCTCTTGGAAATCCCAAGGCAGGCGCCACATTGAAG...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | ATAGGCAAATCCACAAGGACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGCAAGGGCATCTTTCCTaGTCAGCTCAAGGAGTTAGT | + |
Preference number: 2 (lower is better) Translates to: IGKSTRTERLVVARSEERQGHLS*SAQGVS Trigger: ACTAACTCCTTGAGCTGACCAGGAAAGATGCCCTTG...CCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGTCCTTGTGGATTTGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | AAATTAGAACTACCTTTTTCTAGGATCCTCAGAAGCCAAACCACTTaGGTTATATGCTCCCATCTTTCTGGGGGTAGGGTGGAGATGGGG | + |
Preference number: 2 (lower is better) Translates to: KLELPFSRILRSQTT*VICSHLSGGRVEMG Trigger: CCCCATCTCCACCCTACCCCCAGAAAGATGGGAGCATATAACCAAAGTGGTTTGGCTTCTGAGGATCCTAGAAAAAGGTAGTTCTAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | ACTAAGCCCCAGAGAGGAAGGGGCAAGTTCCATCTTCCAGTGGTGAATATCAGAAACAGAAAAACATGCTaGAGCCACAACTTCCAAGAA | + |
Preference number: 2 (lower is better) Translates to: TKPQRGRGKFHLPVVNIRNRKTC*SHNFQE Trigger: TTCTTGGAAGTTGTGGCTGCAGCATGTTTTTCTGTT...TCTGATATTCACCACTGGAAGATGGAACTTGCCCCTTCCTCTCTGGGGCTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCTGGAGAGAGAGATGCTaGGCAGACCATCACTTTAGG | + |
Preference number: 2 (lower is better) Translates to: IRGHLNDMVLNCRANYFTWRERC*ADHHFR Trigger: CCTAAAGTGATGGTCTGCCCAGCATCTCTCTCTCCA...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | ATAGGCAAATCCACAAGGACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGTCTCGGCTCTTTGGATaGCTGTGTAAAACATTGCTT | + |
Preference number: 2 (lower is better) Translates to: IGKSTRTERLVVARSEERSRLFG*LCKTLL Trigger: AAGCAATGTTTTACACAGTCATCCAAAGAGCCGAGA...CCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGTCCTTGTGGATTTGCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCCACAGAGGCAAGAACTaGCTGCAAGAACCTCATGAT | + |
Preference number: 2 (lower is better) Translates to: IRGHLNDMVLNCRANYFTHRGKN*LQEPHD Trigger: ATCATGAGGTTCTTGCAGTCAGTTCTTGCCTCTGTG...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGCTGTGCTGTAAAAACTaGAATGCTGCTCAAGGGCAT | + |
Preference number: 2 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRLCCKN*NAAQGH Trigger: ATGCCCTTGAGCAGCATTGCAGTTTTTACAGCACAG...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGGGCAATACTGGGACATaGATAAAAGGAAACCAAGCC | + |
Preference number: 2 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRGNTGT*IKGNQA Trigger: GGCTTGGTTTCCTTTTATGCATGTCCCAGTATTGCC...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | ACTAAGCCCCAGAGAGGAAGGGGCAAGTTCCATCTTCCAGTGGTGAATATCAGACAACATGCTTTAGTATaGTGGATGGTAAACTGTAGA | + |
Preference number: 2 (lower is better) Translates to: TKPQRGRGKFHLPVVNIRQHALV*WMVNCR Trigger: TCTACAGTTTACCATCCAGCATACTAAAGCATGTTG...TCTGATATTCACCACTGGAAGATGGAACTTGCCCCTTCCTCTCTGGGGCTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCCTGTTCACAATCTCATaGCCACCTTGTTCCCTGACA | + |
Preference number: 2 (lower is better) Translates to: IRGHLNDMVLNCRANYFTLFTIS*PPCSLT Trigger: TGTCAGGGAACAAGGTGGCCATGAGATTGTGAACAG...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCCCAAAGGCATGCTTATaGACTCAAGTGAAACACCAC | + |
Preference number: 2 (lower is better) Translates to: IRGHLNDMVLNCRANYFTPKACL*TQVKHH Trigger: GTGGTGTTTCACTTGAGTGCATAAGCATGCCTTTGG...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR TCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCTCAGAGACTATATCTTaGCAGCTCCATAGGCTATCA | + |
Preference number: 2 (lower is better) Translates to: IRGHLNDMVLNCRANYFTSETIS*QLHRLS Trigger: TGATAGCCTATGGAGCTGTCAAGATATAGTCTCTGA...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR GCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGTTTCTGGGTTGTCTGTaGTGTAAAAACTGCAATGCT | + |
Preference number: 2 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRFLGCL*CKNCNA Trigger: AGCATTGCAGTTTTTACAGCACAGACAACCCAGAAA...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 90 bp | CACAGATGGACAGCAGTTTCTTTCCTACAGTGGCCACAAAGCAAGTaGAACTCAAGTACAACAGACCATACAATTGGTACCATTCAAAAT | + |
Preference number: 2 (lower is better) Translates to: HRWTAVSFLQWPQSK*NSSTTDHTIGTIQN Trigger: ATTTTGAATGGTACCAATTGTATGGTCTGTTGTACTTGAGTTCAACTTGCTTTGTGGCCACTGTAGGAAAGAAACTGCTGTCCATCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCGAAGACTTGATAAACTaGAATCCTGATATCCTCCAT | + |
Preference number: 2 (lower is better) Translates to: IRGHLNDMVLNCRANYFTEDLIN*NPDILH Trigger: ATGGAGGATATCAGGATTCCAGTTTATCAAGTCTTC...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | GCCTGGGACCTCAGAGGGTGGAGTGGCTCTTCTGGCTaGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTC | + |
Preference number: 3 (lower is better) Translates to: AWDLRGWSGSSG*GFAISQRTCWV Trigger: GACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTCCACCCTCTGAGGTCCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | TGGCCTGCCCTGCAAGAGGCCTGGGACCTCAGAGGGTaGAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCA | + |
Preference number: 3 (lower is better) Translates to: WPALQEAWDLRG*SGSSGWGFAIS Trigger: TGAGATTGCAAACCCCCAGCCAGAAGAGCCACTCCACCCTCTGAGGTCCCAGGCCTCTTGCAGGGCAGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | CCCCCGGGAGGAATGGAAGCCACTGCTGACTGCTGCTaGAAGCATATCTACTCGGGAGGGTCTCAGGTCAGG | + |
Preference number: 3 (lower is better) Translates to: PPGGMEATADCC*KHIYSGGSQVR Trigger: CCTGACCTGAGACCCTCCCGAGTAGATATGCTTGCAGCAGCAGTCAGCAGTGGCTTCCATTCCTCCCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | AACACCCAAAGGCTGCTGGACAGACCTGTCACAAGCTaGAGTGGCACCAGCAGCCAGCCCACCTGCCCATCA | + |
Preference number: 3 (lower is better) Translates to: NTQRLLDRPVTS*SGTSSQPTCPS Trigger: TGATGGGCAGGTGGGCTGGCTGCTGGTGCCACTGCAGCTTGTGACAGGTCTGTCCAGCAGCCTTTGGGTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | CATAGCAGAAAAGTGTGGCCTGCCCTGCAAGAGGCCTaGGACCTCAGAGGGTGGAGTGGCTCTTCTGGCTGG | + |
Preference number: 3 (lower is better) Translates to: HSRKVWPALQEA*DLRGWSGSSGW Trigger: CCAGCCAGAAGAGCCACTCCACCCTCTGAGGTCCCAGGCCTCTTGCAGGGCAGGCCACACTTTTCTGCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | AATGTCAGGGCGGGAGAGATGGCTCAGAGCAACTGCTaGTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCC | + |
Preference number: 3 (lower is better) Translates to: NVRAGEMAQSNC*SRSGSGLGLGS Trigger: GGAACCCAACCCCAGCCCAGATCCACTACGAGAGCAGCAGTTGCTCTGAGCCATCTCTCCCGCCCTGACATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | CTCAGAGCAACTGCTGCTCTCGTAGTGGATCTGGGCTaGGGTTGGGTTCCTAGCTCACAACTCTGCGGGACC | + |
Preference number: 3 (lower is better) Translates to: LRATAALVVDLG*GWVPSSQLCGT Trigger: GGTCCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGCAGCAGTTGCTCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGGGTGGTGGGGAAGACTaGAGGACCCAGAACTGTAAC | + |
Preference number: 3 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGGGGED*RTQNCN Trigger: GTTACAGTTCTGGGTCCTCAAGTCTTCCCCACCACC...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGCTTCTGGCTGGGGGTTaGCAATCTCACAGAGGACCT | + |
Preference number: 3 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGLLAGG*QSHRGP Trigger: AGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAG...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | CCCAGCACTTGGCTAGCAGAGGCAGGAGGGTCTCTGTaGGTTCGAGGCCAGCCTGGTCTACAAATTGAGTCC | + |
Preference number: 3 (lower is better) Translates to: PSTWLAEAGGSL*VRGQPGLQIES Trigger: GGACTCAATTTGTAGACCAGGCTGGCCTCGAACTCACAGAGACCCTCCTGCCTCTGCTAGCCAAGTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTTTGCCTCCCAAGTGTTGGGATTAAAGGCGGG | + |
Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSVGIKGG Trigger: CCCGCCTTTAATCCCAACACTTGGGAGGCAAAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | CATGCTATCTGTCTTTCCTCAGAAAGACATCCTGCCTaGGCTAAGAGTGCTGCCAGCAGCTCGTGGCCCGCA | + |
Preference number: 3 (lower is better) Translates to: HAICLSSERHPA*AKSAASSSWPA Trigger: TGCGGGCCACGAGCTGCTGGCAGCACTCTTAGCTCAGGCAGGATGTCTTTCTGAGGAAAGACAGATAGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | CTCTGGGCAGCTCTGAGAGCTGGCTGGAGAGAGAGATaGTGGGCAGACCATCACTTTAGGCAGTATGTACGT | + |
Preference number: 3 (lower is better) Translates to: LWAALRAGWRER*WADHHFRQYVR Trigger: ACGTACATACTGCCTAAAGTGATGGTCTGCCCAGCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | CATTGCATATACATAGCAGAAAAGTGTGGCCTGCCCTaGAAGAGGCCTGGGACCTCAGAGGGTGGAGTGGCT | + |
Preference number: 3 (lower is better) Translates to: HCIYIAEKCGLP*KRPGTSEGGVA Trigger: AGCCACTCCACCCTCTGAGGTCCCAGGCCTCTTGCAGGGCAGGCCACACTTTTCTGCTATGTATATGCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | GTTCAAGGTGTTGAAGCTCTGGGCAGCTCTGAGAGCTaGCTGGAGAGAGAGATGCTGGGCAGACCATCACTT | + |
Preference number: 3 (lower is better) Translates to: VQGVEALGSSES*LEREMLGRPSL Trigger: AAGTGATGGTCTGCCCAGCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCAGAGCTTCAACACCTTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | TGGATGGAGCCCAGTGGTACAATACTTGTCTACATCTaGAAGTCCTGGGTCTGGTCCCCTGCACTGCCACAA | + |
Preference number: 3 (lower is better) Translates to: WMEPSGTILVYI*KSWVWSPALPQ Trigger: TTGTGGCAGTGCAGGGGACCAGACCCAGGACTTGCAGATGTAGACAAGTATTGTACCACTGGGCTCCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | GTACAGCGAGGTGTGCTGGGCTCGGGGCATGTGGTTTaGATTATACGAGTCACAGGATCAAACAGGAAGCAC | + |
Preference number: 3 (lower is better) Translates to: VQRGVLGSGHVV*IIRVTGSNRKH Trigger: GTGCTTCCTGTTTGATCCTGTGACTCGTATAATGCAAACCACATGCCCCGAGCCCAGCACACCTCGCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | GCCAGAATCTCTGCACCAGACCATTTCCTTGCTTCATaGGGAAACCAAGGCTCAGGCCCAGTGTGTAGAGTC | + |
Preference number: 3 (lower is better) Translates to: ARISAPDHFLAS*GNQGSGPVCRV Trigger: GACTCTACACACTGGGCCTGAGCCTTGGTTTCCCCATGAAGCAAGGAAATGGTCTGGTGCAGAGATTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | TGGGCAGCTCTGAGAGCTGGCTGGAGAGAGAGATGCTaGGCAGACCATCACTTTAGGCAGTATGTACGTTTC | + |
Preference number: 3 (lower is better) Translates to: WAALRAGWRERC*ADHHFRQYVRF Trigger: GAAACGTACATACTGCCTAAAGTGATGGTCTGCCCAGCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | ACTCCTAAGCACATAGGGTTCAAGGTGTTGAAGCTCTaGGCAGCTCTGAGAGCTGGCTGGAGAGAGAGATGC | + |
Preference number: 3 (lower is better) Translates to: TPKHIGFKVLKL*AALRAGWRERC Trigger: GCATCTCTCTCTCCAGCCAGCTCTCAGAGCTGCCCAGAGCTTCAACACCTTGAACCCTATGTGCTTAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | CACAAAGCAGAGCTTCAGGCACCTAGATTAGGGGCCTaGCTTTGCTCTCTTGTTCCGCCCTTCTCTTACAGC | + |
Preference number: 3 (lower is better) Translates to: HKAELQAPRLGA*LCSLVPPFSYS Trigger: GCTGTAAGAGAAGGGCGGAACAAGAGAGCAAAGCCAGGCCCCTAATCTAGGTGCCTGAAGCTCTGCTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTCACAAAAGACACCACTaGAGCTTCCCCTTAGCCAAC | + |
Preference number: 3 (lower is better) Translates to: SQHLGSRASSVNSRPACSHKRHH*SFPLAN Trigger: GTTGGCTAAGGGGAAGCTCAAGTGGTGTCTTTTGTG...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGGAACATGAAGGGGTGTaGCACACACATATATACAGA | + |
Preference number: 3 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGEHEGV*HTHIYR Trigger: TCTGTATATATGTGTGTGCAACACCCCTTCATGTTC...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | TGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCGGGACCTTCAGAAGAGCCAGTCAATGCTC | + |
Preference number: 3 (lower is better) Translates to: WMVVSHHVVAGI*TRDLQKSQSML Trigger: GAGCATTGACTGGCTCTTCTGAAGGTCCCGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR GCA 72 bp | CAACAAAGCCAGAATCTCTGCACCAGACCATTTCCTTaGTTCATGGGGAAACCAAGGCTCAGGCCCAGTGTG | + |
Preference number: 3 (lower is better) Translates to: QQSQNLCTRPFP*FMGKPRLRPSV Trigger: CACACTGGGCCTGAGCCTTGGTTTCCCCATGAAGCAAGGAAATGGTCTGGTGCAGAGATTCTGGCTTTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR CAA 90 bp | GGAATTATGATAGAGGAGGGCCAGAGGCCATCAGGCCCCTCTACAAAGAAGAGTGAGCAGGTGAAGAGCTaGACATCCCAAAGGCATGCT | + |
Preference number: 3 (lower is better) Translates to: GIMIEEGQRPSGPSTKKSEQVKS*TSQRHA Trigger: AGCATGCCTTTGGGATGTCAAGCTCTTCACCTGCTC...ACTCTTCTTTGTAGAGGGGCCTGATGGCCTCTGGCCCTCCTCTATCATAATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR CAA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGTTTTTACCTTGGGCATaGACTTATGATCTAACCCAG | + |
Preference number: 3 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGFLPWA*TYDLTQ Trigger: CTGGGTTAGATCATAAGTCAATGCCCAAGGTAAAAA...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR CAA 90 bp | AGTAAGAGTACAGCGAGGTGTGCTGGGCTCGGGGCATGTGGTTTGCATTATACGAATGTGGCGCCTGCCTaGGGATTTCCAAGAGGTATT | + |
Preference number: 3 (lower is better) Translates to: SKSTARCAGLGACGLHYTNVAPA*GFPRGI Trigger: AATACCTCTTGGAAATCCCAAGGCAGGCGCCACATT...CGTATAATGCAAACCACATGCCCCGAGCCCAGCACACCTCGCTGTACTCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR CAA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTGTGCACACTAGCACTTaGAGAGCAGACAGAATGCTC | + |
Preference number: 3 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLVHTST*RADRML Trigger: GAGCATTCTGTCTGCTCTCAAAGTGCTAGTGTGCAC...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGATGACACTCCTTTCTTaGCCTTCTTCCAAAGTATAT | + |
Preference number: 3 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGMTLLS*PSSKVY Trigger: ATATACTTTGGAAGAAGGCAAAGAAAGGAGTGTCAT...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR CAA 90 bp | ACTAAGCCCCAGAGAGGAAGGGGCAAGTTCCATCTTCCAGTGGTGAATATCAGAATAGGGTTCAAGGTGTaGAAGCTCTGGGCAGCTCTG | + |
Preference number: 3 (lower is better) Translates to: TKPQRGRGKFHLPVVNIRIGFKV*KLWAAL Trigger: CAGAGCTGCCCAGAGCTTCAACACCTTGAACCCTAT...TCTGATATTCACCACTGGAAGATGGAACTTGCCCCTTCCTCTCTGGGGCTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR CAA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCCAGGACAGACAGAGCTaGTTACACAGGGAAACCCTG | + |
Preference number: 3 (lower is better) Translates to: VFRHPRRGHQISLWMVVSQDRQS*LHRETL Trigger: CAGGGTTTCCCTGTGTAACAAGCTCTGTCTGTCCTG...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR TCA 72 bp | TTCCATAAAGTCCTCCCCTCATCTCTAGCAGGAGGTTaGCAAGTGCTCAAAGACCCTAGGCAAATGGGCCTG | + |
Preference number: 3 (lower is better) Translates to: FHKVLPSSLAGG*QVLKDPRQMGL Trigger: CAGGCCCATTTGCCTAGGGTCTTTGAGCACTTGTCAACCTCCTGCTAGAGATGAGGGGAGGACTTTATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR TCA 72 bp | GCCCCCACTACAATGTGTAGAATGAAGAGGGAGGGTTaGGAGAAGCTGCCGCAGAAAGGAAAGACAGAAGCA | + |
Preference number: 3 (lower is better) Translates to: APTTMCRMKREG*EKLPQKGKTEA Trigger: TGCTTCTGTCTTTCCTTTCTGCGGCAGCTTCTCTCAACCCTCCCTCTTCATTCTACACATTGTAGTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | TCTAGGATCCTCAGAAGCCAAACCACTTTGGTTATATaGTCCCATCTTTCTGGGGGTAGGGTGGAGATGGGG | + |
Preference number: 3 (lower is better) Translates to: SRILRSQTTLVI*SHLSGGRVEMG Trigger: CCCCATCTCCACCCTACCCCCAGAAAGATGGGAGCATATAACCAAAGTGGTTTGGCTTCTGAGGATCCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | GTAAACGGATGGGGTGAGTCTCTGTTCACAATCTCATaGCCACCTTGTTCCCTGACACTTTGGCCACCTCAA | + |
Preference number: 3 (lower is better) Translates to: VNGWGESLFTIS*PPCSLTLWPPQ Trigger: TTGAGGTGGCCAAAGTGTCAGGGAACAAGGTGGCCATGAGATTGTGAACAGAGACTCACCCCATCCGTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | CAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTaGACAATATCCATCTCCAAATTCCTGAATCCAAGA | + |
Preference number: 3 (lower is better) Translates to: QTGTLAFPGAKG*TISISKFLNPR Trigger: TCTTGGATTCAGGAATTTGGAGATGGATATTGTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | GAGATACAGGCAAGCAGGAAGTGTGACATATACCAGTaGAAGGGGCCTGCCATCTCTCTTCCAGACAGAAGT | + |
Preference number: 3 (lower is better) Translates to: EIQASRKCDIYQ*KGPAISLPDRS Trigger: ACTTCTGTCTGGAAGAGAGATGGCAGGCCCCTTCCACTGGTATATGTCACACTTCCTGCTTGCCTGTATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | GGTAGAGCCACTAAAGGATTCTCTATCCCTGGCCCATaGGGAAGAAAGGGGCAGTCTAGATCACAAAGCACA | + |
Preference number: 3 (lower is better) Translates to: GRATKGFSIPGP*GRKGQSRSQST Trigger: TGTGCTTTGTGATCTAGACTGCCCCTTTCTTCCCCATGGGCCAGGGATAGAGAATCCTTTAGTGGCTCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | AGTAAGAGTACAGCGAGGTGTGCTGGGCTCGGGGCATGTGGTTTGCATTATACGACAAAATCTGGAGGGTaGCCTTTAACTCCAAGGGTA | + |
Preference number: 3 (lower is better) Translates to: SKSTARCAGLGACGLHYTTKSGG*PLTPRV Trigger: TACCCTTGGAGTTAAAGGCAACCCTCCAGATTTTGT...CGTATAATGCAAACCACATGCCCCGAGCCCAGCACACCTCGCTGTACTCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | AGGCACATCTTCAACACACTGGGAGAACTGGAGCCTGTAAACGGATGGGGTGAGTTGTTCCCTGACACTTaGGCCACCTCAACAGAAAAA | + |
Preference number: 3 (lower is better) Translates to: RHIFNTLGELEPVNGWGELFPDT*ATSTEK Trigger: TTTTTCTGTTGAGGTGGCCAAAGTGTCAGGGAACAA...CTCACCCCATCCGTTTACAGGCTCCAGTTCTCCCAGTGTGTTGAAGATGTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | CTCATCTTCCCCCTCAAAGACTGTCCAGTAAGCACCTaGGAACTGACTTTTCTTGGAACAGGGTGCTGGCAA | + |
Preference number: 3 (lower is better) Translates to: LIFPLKDCPVST*ELTFLGTGCWQ Trigger: TTGCCAGCACCCTGTTCCAAGAAAAGTCAGTTCTCAGGTGCTTACTGGACAGTCTTTGAGGGGGAAGATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | GATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCGGGACCTTCAGAAGAGCCA | + |
Preference number: 3 (lower is better) Translates to: DLIMDGCEPPCG*WDLNSGPSEEP Trigger: TGGCTCTTCTGAAGGTCCCGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | AGTCAGCTAAGATTCCTTTATGGCAATACTGGGACATaGATAAAAGGAAACCAAGCCGGGCGTGGTGGCGCA | + |
Preference number: 3 (lower is better) Translates to: SQLRFLYGNTGT*IKGNQAGRGGA Trigger: TGCGCCACCACGCCCGGCTTGGTTTCCTTTTATGCATGTCCCAGTATTGCCATAAAGGAATCTTAGCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | TTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATaGATGGTTGTGAGCCACCATGTGGTTGCTGGGATT | + |
Preference number: 3 (lower is better) Translates to: FRHPRRGHQISL*MVVSHHVVAGI Trigger: AATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | ACCCAGGAGTCAGCTAAGATTCCTTTATGGCAATACTaGGACATGCATAAAAGGAAACCAAGCCGGGCGTGG | + |
Preference number: 3 (lower is better) Translates to: TQESAKIPLWQY*DMHKRKPSRAW Trigger: CCACGCCCGGCTTGGTTTCCTTTTATGCATGTCCCAGTATTGCCATAAAGGAATCTTAGCTGACTCCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | ACTAAGCCCCAGAGAGGAAGGGGCAAGTTCCATCTTCCAGTGGTGAATATCAGAGCAAATGGGCCTGGGTaGCCAGATAGAACAATAAGA | + |
Preference number: 3 (lower is better) Translates to: TKPQRGRGKFHLPVVNIRANGPG*PDRTIR Trigger: TCTTATTGTTCTATCTGGCAACCCAGGCCCATTTGC...TCTGATATTCACCACTGGAAGATGGAACTTGCCCCTTCCTCTCTGGGGCTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | ATAGGCAAATCCACAAGGACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGAATGAAGAGGGAGGGTaGAGAGAAGCTGCCGCAGAA | + |
Preference number: 3 (lower is better) Translates to: IGKSTRTERLVVARSEERNEEGG*REAAAE Trigger: TTCTGCGGCAGCTTCTCTCAACCCTCCCTCTTCATT...CCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGTCCTTGTGGATTTGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | AGTCACAGTTGTTTGTCCCTAGAAGTCCTACAGCACTaGACTTGGTCTTTACACCAGGCTACCAGCCAGCAA | + |
Preference number: 3 (lower is better) Translates to: SHSCLSLEVLQH*TWSLHQATSQQ Trigger: TTGCTGGCTGGTAGCCTGGTGTAAAGACCAAGTTCAGTGCTGTAGGACTTCTAGGGACAAACAACTGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | AGGGAGAGGTGTGTATCAGGAGGTGGGAGACTATCTTaGGAGATACAGGCAAGCAGGAAGTGTGACATATAC | + |
Preference number: 3 (lower is better) Translates to: RERCVSGGGRLS*EIQASRKCDIY Trigger: GTATATGTCACACTTCCTGCTTGCCTGTATCTCTCAAGATAGTCTCCCACCTCCTGATACACACCTCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | CTAGACTGTATCCTTCCAGAATATCCACAGAGAGGCTaGGGACAAGCTCCAGTTACAGAACAAAGGCAGTCC | + |
Preference number: 3 (lower is better) Translates to: LDCILPEYPQRG*GQAPVTEQRQS Trigger: GGACTGCCTTTGTTCTGTAACTGGAGCTTGTCCTCAGCCTCTCTGTGGATATTCTGGAAGGATACAGTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | TTCACAATCTCATGGCCACCTTGTTCCCTGACACTTTaGCCACCTCAACAGAAAAACATGCTGCAGCCACAA | + |
Preference number: 3 (lower is better) Translates to: FTISWPPCSLTL*PPQQKNMLQPQ Trigger: TTGTGGCTGCAGCATGTTTTTCTGTTGAGGTGGCCAAAGTGTCAGGGAACAAGGTGGCCATGAGATTGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | GAAAGTGCCCTGAATAAAGTATACCCAGCTGCCTGCTaGGCTATCCTGACTACTGTCACTCCTAAGCACATA | + |
Preference number: 3 (lower is better) Translates to: ESALNKVYPAAC*AILTTVTPKHI Trigger: TATGTGCTTAGGAGTGACAGTAGTCAGGATAGCCCAGCAGGCAGCTGGGTATACTTTATTCAGGGCACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | GAAACTGCAACTCAGAACCAGCTAAGGGACTGTGGATaGAGCCCAGTGGTACAATACTTGTCTACATCTGCA | + |
Preference number: 3 (lower is better) Translates to: ETATQNQLRDCG*SPVVQYLSTSA Trigger: TGCAGATGTAGACAAGTATTGTACCACTGGGCTCCATCCACAGTCCCTTAGCTGGTTCTGAGTTGCAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | ACTGCAACGGGACCTGAAGGCATACACTGTGCAGTCTaGAAAGCTAGTGAAATCAAGAGGGATACAGGAACT | + |
Preference number: 3 (lower is better) Translates to: TATGPEGIHCAV*KASEIKRDTGT Trigger: AGTTCCTGTATCCCTCTTGATTTCACTAGCTTTCCAGACTGCACAGTGTATGCCTTCAGGTCCCGTTGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | TGGGTTTTTGAGAAATTAGAAAGCACAAATACAGACTaGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGAC | + |
Preference number: 3 (lower is better) Translates to: WVFEKLESTNTD*HPCIPRCQGLD Trigger: GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTCTAATTTCTCAAAAACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | GGAATTATGATAGAGGAGGGCCAGAGGCCATCAGGCCCCTCTACAAAGAAGAGTTCAGTTCTCGGCTCTTaGGATGACTGTGTAAAACAT | + |
Preference number: 3 (lower is better) Translates to: GIMIEEGQRPSGPSTKKSSVLGS*DDCVKH Trigger: ATGTTTTACACAGTCATCCAAAGAGCCGAGAACTGA...ACTCTTCTTTGTAGAGGGGCCTGATGGCCTCTGGCCCTCCTCTATCATAATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCATCCAGAAGTCACAGTaGTTTGTCCCTAGAAGTCCT | + |
Preference number: 3 (lower is better) Translates to: VFRHPRRGHQISLWMVVSIQKSQ*FVPRSP Trigger: AGGACTTCTAGGGACAAACAACTGTGACTTCTGGAT...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | GGAATTATGATAGAGGAGGGCCAGAGGCCATCAGGCCCCTCTACAAAGAAGAGTATAAACTTAGAAACCTaGGAGGACTTAGGTCTGAAC | + |
Preference number: 3 (lower is better) Translates to: GIMIEEGQRPSGPSTKKSINLET*EDLGLN Trigger: GTTCAGACCTAAGTCCTCCAAGGTTTCTAAGTTTAT...ACTCTTCTTTGTAGAGGGGCCTGATGGCCTCTGGCCCTCCTCTATCATAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | ACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGTaGAGGAGGACTGCTAGTGGGAACAGGATTTTTCTG | + |
Preference number: 3 (lower is better) Translates to: TERLVVARSEER*RRTASGNRIFL Trigger: CAGAAAAATCCTGTTCCCACTAGCAGTCCTCCTTCACCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | GGACCTTCAGAAGAGCCAGTCAATGCTCTTAACCGCTaGGCCATCTCTCCAGCCCAGAAGTTTGAAATTTTA | + |
Preference number: 3 (lower is better) Translates to: GPSEEPVNALNR*AISPAQKFEIL Trigger: TAAAATTTCAAACTTCTGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCATTGACTGGCTCTTCTGAAGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | CCAACTACTTTACCTAGTACTCAACCAAAGAAGCAGTaGTCTCCTCCCACAGAGGCAAGAACTGACTGCAAG | + |
Preference number: 3 (lower is better) Translates to: PTTLPSTQPKKQ*SPPTEARTDCK Trigger: CTTGCAGTCAGTTCTTGCCTCTGTGGGAGGAGATCACTGCTTCTTTGGTTGAGTACTAGGTAAAGTAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | GGTCTCTTGATGACCTCAGCTCCATCCAAAGCTCCTTaGAAAGCACCACAAGAGTCTCTCCCATTTCAACTT | + |
Preference number: 3 (lower is better) Translates to: GLLMTSAPSKAP*KAPQESLPFQL Trigger: AAGTTGAAATGGGAGAGACTCTTGTGGTGCTTTTCAAGGAGCTTTGGATGGAGCTGAGGTCATCAAGAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | CCTGGTTCAGTGATAATGAGAAAACATGAAGACACCTaGTCCCTAGGAGCTCACAGGCTGGAAGGAAAAACA | + |
Preference number: 3 (lower is better) Translates to: PGSVIMRKHEDT*SLGAHRLEGKT Trigger: TGTTTTTCCTTCCAGCCTGTGAGCTCCTAGGGAGCAGGTGTCTTCATGTTTTCTCATTATCACTGAACCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | GAGAAATTAGAAAGCACAAATACAGACTGGCACCCTTaGATTCCCAGGTGCCAAGGGCTGGACAATATCCAT | + |
Preference number: 3 (lower is better) Translates to: EKLESTNTDWHP*IPRCQGLDNIH Trigger: ATGGATATTGTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTCTAATTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | TACCTTTTTCTAGGATCCTCAGAAGCCAAACCACTTTaGTTATATGCTCCCATCTTTCTGGGGGTAGGGTGG | + |
Preference number: 3 (lower is better) Translates to: YLFLGSSEAKPL*LYAPIFLGVGW Trigger: CCACCCTACCCCCAGAAAGATGGGAGCATATAACCAAAGTGGTTTGGCTTCTGAGGATCCTAGAAAAAGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | TTAGGAAACTGCAACTCAGAACCAGCTAAGGGACTGTaGATGGAGCCCAGTGGTACAATACTTGTCTACATC | + |
Preference number: 3 (lower is better) Translates to: LGNCNSEPAKGL*MEPSGTILVYI Trigger: GATGTAGACAAGTATTGTACCACTGGGCTCCATCCACAGTCCCTTAGCTGGTTCTGAGTTGCAGTTTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | CTGATACATATTCAGGGAGAGGTGTGTATCAGGAGGTaGGAGACTATCTTGAGAGATACAGGCAAGCAGGAA | + |
Preference number: 3 (lower is better) Translates to: LIHIQGEVCIRR*ETILRDTGKQE Trigger: TTCCTGCTTGCCTGTATCTCTCAAGATAGTCTCCCACCTCCTGATACACACCTCTCCCTGAATATGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCCCTACAGCACTGAACTaGGTCTTTACACCAGGCTAC | + |
Preference number: 3 (lower is better) Translates to: IRGHLNDMVLNCRANYFTPTALN*VFTPGY Trigger: GTAGCCTGGTGTAAAGACCAAGTTCAGTGCTGTAGG...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCATCTCTAGCAGGAGGTaGACAAGTGCTCAAAGACCC | + |
Preference number: 3 (lower is better) Translates to: IRGHLNDMVLNCRANYFTISSRR*TSAQRP Trigger: GGGTCTTTGAGCACTTGTCAACCTCCTGCTAGAGAT...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGGGTGTGCGAGCTGAGTaGTCACAATTCATTCACTTC | + |
Preference number: 3 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRGVRAE*SQFIHF Trigger: GAAGTGAATGAATTGTGACAACTCAGCTCGCACACC...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGAGGCAGTGTGACCTTTaGTTTCCTTCCTTCTCACCA | + |
Preference number: 3 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRRQCDL*FPSFSP Trigger: TGGTGAGAAGGAAGGAAACAAAAGGTCACACTGCCT...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR CCA 72 bp | GACCTGCTTAATGAGAACTGCTCCTTACTGCGCAAATaGTATGTGCCAATGAATACTCTTCTCCGTGTGCAT | + |
Preference number: 3 (lower is better) Translates to: DLLNENCSLLRK*YVPMNTLLRVH Trigger: ATGCACACGGAGAAGAGTATTCATTGGCACATACCATTTGCGCAGTAAGGAGCAGTTCTCATTAAGCAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | CCTATGAACACAGCACAAAGCATGGTGAGGGTAAAGTaGAATGCAGTGCAAAATGCTTCAAGTAGTTTGGGC | + |
Preference number: 3 (lower is better) Translates to: PMNTAQSMVRVK*NAVQNASSSLG Trigger: GCCCAAACTACTTGAAGCATTTTGCACTGCATTCCACTTTACCCTCACCATGCTTTGTGCTGTGTTCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR-3UTR CAA 90 bp | ACTAAGCCCCAGAGAGGAAGGGGCAAGTTCCATCTTCCAGTGGTGAATATCAGACGAACTCTTATATTTTaGGTTGTAAGCCTATTTCCC | + |
Preference number: 3 (lower is better) Translates to: TKPQRGRGKFHLPVVNIRRTLIF*VVSLFP Trigger: GGGAAATAGGCTTACAACCAAAAATATAAGAGTTCG...TCTGATATTCACCACTGGAAGATGGAACTTGCCCCTTCCTCTCTGGGGCTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR TCA 72 bp | TTCACTTCGCAGATACTTCCGAAGCACTGCTTACACTaGCTAGACTGGCCTGGTTCAGTGATAATGAGAAAA | + |
Preference number: 3 (lower is better) Translates to: FTSQILPKHCLH*LDWPGSVIMRK Trigger: TTTTCTCATTATCACTGAACCAGGCCAGTCTAGTCAGTGTAAGCAGTGCTTCGGAAGTATCTGCGAAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR TCA 72 bp | GTGCCAAGGGCTGGACAATATCCATCTCCAAATTCCTaGATCCAAGATCTACACCTCAATTCGACTAGACTT | + |
Preference number: 3 (lower is better) Translates to: VPRAGQYPSPNS*IQDLHLNSTRL Trigger: AAGTCTAGTCGAATTGAGGTGTAGATCTTGGATTCAGGAATTTGGAGATGGATATTGTCCAGCCCTTGGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR TCA 72 bp | CCGGGACAGACAGACAGAGGAAGCCTACAACACAAATaGGCAACTATTATCCTGACCAGACACTACATATTT | + |
Preference number: 3 (lower is better) Translates to: PGQTDRGSLQHK*ATIILTRHYIF Trigger: AAATATGTAGTGTCTGGTCAGGATAATAGTTGCTCATTTGTGTTGTAGGCTTCCTCTGTCTGTCTGTCCCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | TTACGACTTAGTTCTGAAGTCTTCTGCTTCTTCATGTaGATCACTGTTCATTCACAGTGTAGGCAGCCACCA | + |
Preference number: 3 (lower is better) Translates to: LRLSSEVFCFFM*ITVHSQCRQPP Trigger: TGGTGGCTGCCTACACTGTGAATGAACAGTGATGCACATGAAGAAGCAGAAGACTTCAGAACTAAGTCGTAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | AATACCACTGAGAGATATCAACAAAGCCAGAATCTCTaGACCAGACCATTTCCTTGCTTCATGGGGAAACCA | + |
Preference number: 3 (lower is better) Translates to: NTTERYQQSQNL*TRPFPCFMGKP Trigger: TGGTTTCCCCATGAAGCAAGGAAATGGTCTGGTGCAGAGATTCTGGCTTTGTTGATATCTCTCAGTGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR GCA 72 bp | CACCAAAGATTGTCAATGCCATCTGTAACTATGACTTaGAGAGGAGCCCTCTCAGCCCATTTGATACTAATG | + |
Preference number: 3 (lower is better) Translates to: HQRLSMPSVTMT*RGALSAHLILM Trigger: CATTAGTATCAAATGGGCTGAGAGGGCTCCTCTGCAAGTCATAGTTACAGATGGCATTGACAATCTTTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | CAGCAGTTTCTTTCCTACAGTGGCCACAAAGCAAGTTaGACTCAAGTACAACAGACCATACAATTGGTACCA | + |
Preference number: 3 (lower is better) Translates to: QQFLSYSGHKAS*TQVQQTIQLVP Trigger: TGGTACCAATTGTATGGTCTGTTGTACTTGAGTTCAACTTGCTTTGTGGCCACTGTAGGAAAGAAACTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR TCA 72 bp | CTGTATAACAAGGAGAGACCATCTGAAACAGGCTTCTaGAGCAACACTCCCAATTGCTTCCAGAAACATCAA | + |
Preference number: 3 (lower is better) Translates to: LYNKERPSETGF*SNTPNCFQKHQ Trigger: TTGATGTTTCTGGAAGCAATTGGGAGTGTTGCTTCAGAAGCCTGTTTCAGATGGTCTCTCCTTGTTATACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR-3UTR CAA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGCTCTCAAGTAAAAATTaGCCCCCACTACAATGTGTA | + |
Preference number: 3 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRLSSKN*PPLQCV Trigger: TACACATTGTAGTGGGGGCAAATTTTTACTTGAGAG...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR CCA 72 bp | TGTAAAAACTGCAATGCTGCTCAAGGGCATCTTTCCTaGTCAGCTCAAGGAGTTAGTTTTGAATACATACTG | + |
Preference number: 3 (lower is better) Translates to: CKNCNAAQGHLS*SAQGVSFEYIL Trigger: CAGTATGTATTCAAAACTAACTCCTTGAGCTGACCAGGAAAGATGCCCTTGAGCAGCATTGCAGTTTTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
||
3UTR GCA 72 bp | AGCTTGGCAATTCCTCCAAAGACTAAAGGTAAGAGCTaGCTTACGATCCATCCATTCTATTCCTATACAAAA | + |
Preference number: 3 (lower is better) Translates to: SLAIPPKTKGKS*LTIHPFYSYTK Trigger: TTTTGTATAGGAATAGAATGGATGGATCGTAAGGCAGCTCTTACCTTTAGTCTTTGGAGGAATTGCCAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR GCA 72 bp | GATACAGTTTTGTTACGACTTAGTTCTGAAGTCTTCTaGTTCTTCATGTGCATCACTGTTCATTCACAGTGT | + |
Preference number: 3 (lower is better) Translates to: DTVLLRLSSEVF*FFMCITVHSQC Trigger: ACACTGTGAATGAACAGTGATGCACATGAAGAAGCAGAAGACTTCAGAACTAAGTCGTAACAAAACTGTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CCA 72 bp | AAATTAGTAAACAATATTGGTGAAGACTTGATAAACTaGAATCCTGATATCCTCCATGGGAACACAGCTTGG | + |
Preference number: 3 (lower is better) Translates to: KLVNNIGEDLIN*NPDILHGNTAW Trigger: CCAAGCTGTGTTCCCATGGAGGATATCAGGATTCCAGTTTATCAAGTCTTCACCAATATTGTTTACTAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | AGGTCAAAAGGGTGGGGCTCAGACCTAGTCCACGGGTaGGTGCTGAGAAGGGTCACTGGCACACACAGAGGA | + |
Preference number: 4 (lower is better) Translates to: RSKGWGSDLVHG*VLRRVTGTHRG Trigger: TCCTCTGTGTGTGCCAGTGACCCTTCTCAGCACCAACCCGTGGACTAGGTCTGAGCCCCACCCTTTTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGTCAGGGCTCTCTTCTTaGTCACATCCCGCTGAATGC | + |
Preference number: 4 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQSGLSS*SHPAEC Trigger: GCATTCAGCGGGATGTGATCAAGAAGAGAGCCCTGA...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTGGGCTGCTTGAGACCTaGGAGCTCCTCATGGTACTC | + |
Preference number: 4 (lower is better) Translates to: SQHLGSRASSVNSRPACSGLLET*ELLMVL Trigger: GAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCC...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | GAAAGCACAAATACAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACTCAGGACTCTGCCTCTaGACCAGAGCTACTTTCCCG | + |
Preference number: 4 (lower is better) Translates to: ESTNTDWHPCIPRCQGLDSGLCL*TRATFP Trigger: CGGGAAAGTAGCTCTGGTTCAGAGGCAGAGTCCTGA...GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGAGGCCTTTAACATCTTaGCTGGGAACACCTAGCCTA | + |
Preference number: 4 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQRPLTS*LGTPSL Trigger: TAGGCTAGGTGTTCCCAGGCAAGATGTTAAAGGCCT...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGGAAAGTGGAAGCGCTTaGCTCGCTGTTCTTTCTTTT | + |
Preference number: 4 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGESGSA*LAVLSF Trigger: AAAAGAAAGAACAGCGAGCCAAGCGCTTCCACTTTC...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GAAAGCACAAATACAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACCGGCTGACTTCAATCTaGAGCGAAGGCAAGCTATCC | + |
Preference number: 4 (lower is better) Translates to: ESTNTDWHPCIPRCQGLDRLTSI*SEGKLS Trigger: GGATAGCTTGCCTTCGCTCCAGATTGAAGTCAGCCG...GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | CTAAGGGACTGTGGATGGAGCCCAGTGGTACAATACTaGTCTACATCTGCAAGTCCTGGGTCTGGTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: LRDCGWSPVVQY*STSASPGSGPL Trigger: CAGGGGACCAGACCCAGGACTTGCAGATGTAGACAAGTATTGTACCACTGGGCTCCATCCACAGTCCCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTGCACCAGATGCCCTGTaGTCCACTTTCTTCGTGTTC | + |
Preference number: 4 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLAPDAL*STFFVF Trigger: GAACACGAAGAAAGTGGATCACAGGGCATCTGGTGC...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGCTTCTCATCTTATCCTaGGCTGGCAGAGAACTCATA | + |
Preference number: 4 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQLLILS*AGRELI Trigger: TATGAGTTCTCTGCCAGCCCAGGATAAGATGAGAAG...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GGAATTATGATAGAGGAGGGCCAGAGGCCATCAGGCCCCTCTACAAAGAAGAGTAGTACTGCTGACTGCTaGCCGTGGACAGGAATGCTG | + |
Preference number: 4 (lower is better) Translates to: GIMIEEGQRPSGPSTKKSSTADC*PWTGML Trigger: CAGCATTCCTGTCCACGGCCAGCAGTCAGCAGTACT...ACTCTTCTTTGTAGAGGGGCCTGATGGCCTCTGGCCCTCCTCTATCATAATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | GAAACCAAGGCTCAGGCCCAGTGTGTAGAGTCCTGGTaGGCATCCAGGTCTCTGTTCTCAGGCCATTTTTCT | + |
Preference number: 4 (lower is better) Translates to: ETKAQAQCVESW*ASRSLFSGHFS Trigger: AGAAAAATGGCCTGAGAACAGAGACCTGGATGCCAACCAGGACTCTACACACTGGGCCTGAGCCTTGGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | AGTACAGCGAGGTGTGCTGGGCTCGGGGCATGTGGTTaGCATTATACGAGTCACAGGATCAAACAGGAAGCA | + |
Preference number: 4 (lower is better) Translates to: STARCAGLGACG*HYTSHRIKQEA Trigger: TGCTTCCTGTTTGATCCTGTGACTCGTATAATGCAAACCACATGCCCCGAGCCCAGCACACCTCGCTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | TGCTTCAAAGCCCAGCTCCCCCTGATCCAAGGACATTaGGTAGAGCCACTAAAGGATTCTCTATCCCTGGCC | + |
Preference number: 4 (lower is better) Translates to: CFKAQLPLIQGH*VEPLKDSLSLA Trigger: GGCCAGGGATAGAGAATCCTTTAGTGGCTCTACCAAATGTCCTTGGATCAGGGGGAGCTGGGCTTTGAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGGCTCACGGGGCTGCTTaGGACCTGGGAGCTCCTCAT | + |
Preference number: 4 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRAHGAA*DLGAPH Trigger: ATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGC...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTCCTACTATGTACATCTaGAGAGGGCTCTCTCCGAAC | + |
Preference number: 4 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLPTMYI*RGLSPN Trigger: GTTCGGAGAGAGCCCTCTTCAGATGTACATAGTAGG...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGACTAAAAGCCTTCTCTaGAGAATACGGTCTTTTTCC | + |
Preference number: 4 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGTKSLL*RIRSFS Trigger: GGAAAAAGACCGTATTCTCCAGAGAAGGCTTTTAGT...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTTCCAACCACTCAATGTaGGCTGGAGGATATTCCTTA | + |
Preference number: 4 (lower is better) Translates to: SQHLGSRASSVNSRPACSSNHSM*AGGYSL Trigger: TAAGGAATATCCTCCAGCTCACATTGAGTGGTTGGA...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGCAACTCTACATCACTTaGATTCTCATCTTCCACTTC | + |
Preference number: 4 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQQLYIT*ILIFHF Trigger: GAAGTGGAAGATGAGAATTCAAGTGATGTAGAGTTG...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | GGAATTATGATAGAGGAGGGCCAGAGGCCATCAGGCCCCTCTACAAAGAAGAGTACTCTTCTTTCTCCTTaGTCAGAGCACCCCATGCTC | + |
Preference number: 4 (lower is better) Translates to: GIMIEEGQRPSGPSTKKSTLLSP*SEHPML Trigger: GAGCATGGGGTGCTCTGATCAAGGAGAAAGAAGAGT...ACTCTTCTTTGTAGAGGGGCCTGATGGCCTCTGGCCCTCCTCTATCATAATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCAGCTACTTTCCCGGCTaGCTTCAATCTGGAGCGAAG | + |
Preference number: 4 (lower is better) Translates to: VFRHPRRGHQISLWMVVSSYFPG*LQSGAK Trigger: CTTCGCTCCAGATTGAAGTCAGCCGGGAAAGTAGCT...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTCTTCACTGGCATCTCTaGTTCTCATCTTATCCTGGG | + |
Preference number: 4 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLLHWHL*FSSYPG Trigger: CCCAGGATAAGATGAGAAGCAGAGATGCCAGTGAAG...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | AGGCACATCTTCAACACACTGGGAGAACTGGAGCCTGTAAACGGATGGGGTGAGTCACATCCCGCTGAATaGGACGGGAATGATATCTTC | + |
Preference number: 4 (lower is better) Translates to: RHIFNTLGELEPVNGWGESHPAE*DGNDIF Trigger: GAAGATATCATTCCCGTCGCATTCAGCGGGATGTGA...CTCACCCCATCCGTTTACAGGCTCCAGTTCTCCCAGTGTGTTGAAGATGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGCCACTCAATGTGAGCTaGAGGATATTCCTTAAAATA | + |
Preference number: 4 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGPLNVS*RIFLKI Trigger: TATTTTAAGGAATATCCTCCAGCTCACATTGAGTGG...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | TCAACAAAGCCAGAATCTCTGCACCAGACCATTTCCTaGCTTCATGGGGAAACCAAGGCTCAGGCCCAGTGT | + |
Preference number: 4 (lower is better) Translates to: STKPESLHQTIS*LHGETKAQAQC Trigger: ACACTGGGCCTGAGCCTTGGTTTCCCCATGAAGCAAGGAAATGGTCTGGTGCAGAGATTCTGGCTTTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | GAGTGGCTCTTCTGGCTGGGGGTTTGCAATCTCACAGAGGACCTGCTGGGTCAGTTCTTTCTTTTCAATTaGTTCCTTGGAGGTGACATC | + |
Preference number: 4 (lower is better) Translates to: EWLFWLGVCNLTEDLLGQFFLFN*FLGGDI Trigger: GATGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAA...CTGACCCAGCAGGTCCTCTGTGAGATTGCAAACCCCCAGCCAGAAGAGCCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | AGGCACATCTTCAACACACTGGGAGAACTGGAGCCTGTAAACGGATGGGGTGAGGGCAAGATTTACTTCTaGTCGAAAGTGGAAGCGCTT | + |
Preference number: 4 (lower is better) Translates to: RHIFNTLGELEPVNGWGEGKIYF*SKVEAL Trigger: AAGCGCTTCCACTTTCGAGCAGAAGTAAATCTTGCC...CTCACCCCATCCGTTTACAGGCTCCAGTTCTCCCAGTGTGTTGAAGATGTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCTTTAGTACTGCTGACTaGTGGCCGTGGACAGGAATG | + |
Preference number: 4 (lower is better) Translates to: VFRHPRRGHQISLWMVVSFSTAD*WPWTGM Trigger: CATTCCTGTCCACGGCCAGCAGTCAGCAGTACTAAA...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTACGACTTGTCTTCACTaGCATCTCTGCTTCTCATCT | + |
Preference number: 4 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLTTCLH*HLCFSS Trigger: AGATGAGAAGCAGAGATGCCAGTGAAGACAAGTCGT...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGGCTGACTGCTGGCCGTaGACAGGAATGCTGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRADCWP*TGMLPL Trigger: AAGAGGCAGCATTCCTGTCCACGGCCAGCAGTCAGC...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | GTTCACAATCTCATGGCCACCTTGTTCCCTGACACTTaGGCCACCTCAACAGAAAAACATGCTGCAGCCACA | + |
Preference number: 4 (lower is better) Translates to: VHNLMATLFPDT*ATSTEKHAAAT Trigger: TGTGGCTGCAGCATGTTTTTCTGTTGAGGTGGCCAAAGTGTCAGGGAACAAGGTGGCCATGAGATTGTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | TCCCAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTaGAAGATGAGCTCCACAAGGAGTCAGGGGCAGGCA | + |
Preference number: 4 (lower is better) Translates to: SQPAFPQKVEEY*KMSSTRSQGQA Trigger: TGCCTGCCCCTGACTCCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTTCTCACCTTGGGAATTaGTTTCTTCATCATGTCTCG | + |
Preference number: 4 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLSHLGN*FLHHVS Trigger: CGAGACATGATGAAGAAAGCAATTCCCAAGGTGAGA...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCTTCCTCAGCACCAGATaGCCTGTGATCCACTTTCTT | + |
Preference number: 4 (lower is better) Translates to: VFRHPRRGHQISLWMVVSFLSTR*PVIHFL Trigger: AAGAAAGTGGATCACAGGGCATCTGGTGCTGAGGAA...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | AGTAAGAGTACAGCGAGGTGTGCTGGGCTCGGGGCATGTGGTTTGCATTATACGCATCTTATCCTGGGCTaGCAGAGAACTCATATTGAT | + |
Preference number: 4 (lower is better) Translates to: SKSTARCAGLGACGLHYTHLILG*QRTHID Trigger: ATCAATATGAGTTCTCTGCCAGCCCAGGATAAGATG...CGTATAATGCAAACCACATGCCCCGAGCCCAGCACACCTCGCTGTACTCTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCCCTGGGAGCTCCTCATaGTACTCCACCACGACTCTG | + |
Preference number: 4 (lower is better) Translates to: IRGHLNDMVLNCRANYFTPGSSS*YSTTTL Trigger: CAGAGTCGTGGTGGAGTACCATGAGGAGCTCCCAGG...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | AGGCACATCTTCAACACACTGGGAGAACTGGAGCCTGTAAACGGATGGGGTGAGTCTGAACTGTCTTCCTaGTTGTCTTTCTTGTTCTTC | + |
Preference number: 4 (lower is better) Translates to: RHIFNTLGELEPVNGWGESELSS*LSFLFF Trigger: GAAGAACAAGAAAGACAAGCAGGAAGACAGTTCAGA...CTCACCCCATCCGTTTACAGGCTCCAGTTCTCCCAGTGTGTTGAAGATGTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCGAGATGACGGACATCTaGAAATTTCTCAGGAGGCAA | + |
Preference number: 4 (lower is better) Translates to: VFRHPRRGHQISLWMVVSEMTDI*KFLRRQ Trigger: TTGCCTCCTGAGAAATTTGCAGATGTCCGTCATCTC...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCCGTGGACAGGAATGCTaGCTCTTTTCATCTAAGAGA | + |
Preference number: 4 (lower is better) Translates to: VFRHPRRGHQISLWMVVSRGQEC*LFSSKR Trigger: TCTCTTAGATGAAAAGAGGCAGCATTCCTGTCCACG...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | ATAGGCAAATCCACAAGGACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGCCGCTGGCGAATATCTaGTTTAGTACTGCTGACTGC | + |
Preference number: 4 (lower is better) Translates to: IGKSTRTERLVVARSEERPLANI*FSTADC Trigger: GCAGTCAGCAGTACTAAACCAGATATTCGCCAGCGG...CCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGTCCTTGTGGATTTGCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | AGTAAGAGTACAGCGAGGTGTGCTGGGCTCGGGGCATGTGGTTTGCATTATACGCTTTTTCCTAACCGCTaGCGAATATCTGGTTTAGTA | + |
Preference number: 4 (lower is better) Translates to: SKSTARCAGLGACGLHYTLFPNR*RISGLV Trigger: TACTAAACCAGATATTCGCCAGCGGTTAGGAAAAAG...CGTATAATGCAAACCACATGCCCCGAGCCCAGCACACCTCGCTGTACTCTTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | CAACAGACCATACAATTGGTACCATTCAAAATAATGACACTCCTTTCTTTGCCTCTTCTTCCACTTCCATaGGCTCCGGCTCGCCACGCT | + |
Preference number: 4 (lower is better) Translates to: QQTIQLVPFKIMTLLSLPLLPLP*APARHA Trigger: AGCGTGGCGAGCCGGAGCCCATGGAAGTGGAAGAAG...AGGCAAAGAAAGGAGTGTCATTATTTTGAATGGTACCAATTGTATGGTCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCACTTCTGCTCGAAAGTaGAAGCGCTTGGCTCGCTGT | + |
Preference number: 4 (lower is better) Translates to: IRGHLNDMVLNCRANYFTTSARK*KRLARC Trigger: ACAGCGAGCCAAGCGCTTCCACTTTCGAGCAGAAGT...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCTCTCCAGTCTCACCTTaGGAATTGCTTTCTTCATCA | + |
Preference number: 4 (lower is better) Translates to: VFRHPRRGHQISLWMVVSSPVSP*ELLSSS Trigger: TGATGAAGAAAGCAATTCCCAAGGTGAGACTGGAGA...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | ATAGGCAAATCCACAAGGACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGCCTCCTCTTCCTCAATaGGTTCCTCAGGAACATTCA | + |
Preference number: 4 (lower is better) Translates to: IGKSTRTERLVVARSEERPPLPQ*VPQEHS Trigger: TGAATGTTCCTGAGGAACCCATTGAGGAAGAGGAGG...CCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGTCCTTGTGGATTTGCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GAAAGCACAAATACAGACTGGCACCCTTGCATTCCCAGGTGCCAAGGGCTGGACCTTCATCTGCATACATaGTCATTTTCATGCTTTTCT | + |
Preference number: 4 (lower is better) Translates to: ESTNTDWHPCIPRCQGLDLHLHT*SFSCFS Trigger: AGAAAAGCATGAAAATGACCATGTATGCAGATGAAG...GTCCAGCCCTTGGCACCTGGGAATGCAAGGGTGCCAGTCTGTATTTGTGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGAGCCGACTCTTCTTCTaGCGAGACTCTTCTTTCTCC | + |
Preference number: 4 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRSRLFF*RDSSFS Trigger: GGAGAAAGAAGAGTCTCGCCAGAAGAAGAGTCGGCT...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | CTACCTTTTTCTAGGATCCTCAGAAGCCAAACCACTTaGGTTATATGCTCCCATCTTTCTGGGGGTAGGGTG | + |
Preference number: 4 (lower is better) Translates to: LPFSRILRSQTT*VICSHLSGGRV Trigger: CACCCTACCCCCAGAAAGATGGGAGCATATAACCAAAGTGGTTTGGCTTCTGAGGATCCTAGAAAAAGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | GGAATTATGATAGAGGAGGGCCAGAGGCCATCAGGCCCCTCTACAAAGAAGAGTCTAATACTTTTCAGTTaGGACTCTACTTCATCTGCA | + |
Preference number: 4 (lower is better) Translates to: GIMIEEGQRPSGPSTKKSLILFS*DSTSSA Trigger: TGCAGATGAAGTAGAGTCCCAACTGAAAAGTATTAG...ACTCTTCTTTGTAGAGGGGCCTGATGGCCTCTGGCCCTCCTCTATCATAATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | ATAGGCAAATCCACAAGGACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGTCTCTCCGAACCACCTaGTTACTACTAAAAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: IGKSTRTERLVVARSEERSLRTT*LLLKAF Trigger: GAAGGCTTTTAGTAGTAACCAGGTGGTTCGGAGAGA...CCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGTCCTTGTGGATTTGCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | CCCCCACATGTCCATGAAGGAGAACATGAAGGGGTGTaGCACACACATATATACAGAAGCCTATTCATGATC | + |
Preference number: 4 (lower is better) Translates to: PPHVHEGEHEGV*HTHIYRSLFMI Trigger: GATCATGAATAGGCTTCTGTATATATGTGTGTGCAACACCCCTTCATGTTCTCCTTCATGGACATGTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | CCCTCTCAGACTTCTAGCATTTCCATCTGTGATATCTaGTTACAGCTGCCCAAGCAAATGGACATCTTAGGC | + |
Preference number: 4 (lower is better) Translates to: PSQTSSISICDI*LQLPKQMDILG Trigger: GCCTAAGATGTCCATTTGCTTGGGCAGCTGTAACAAGATATCACAGATGGAAATGCTAGAAGTCTGAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | AAGGGCATCTTTCCTGGTCAGCTCAAGGAGTTAGTTTaGAATACATACTGCCTACCTTCCATAAAGTCCTCC | + |
Preference number: 4 (lower is better) Translates to: KGIFPGQLKELV*NTYCLPSIKSS Trigger: GGAGGACTTTATGGAAGGTAGGCAGTATGTATTCAAAACTAACTCCTTGAGCTGACCAGGAAAGATGCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | CAACAGACCATACAATTGGTACCATTCAAAATAATGACACTCCTTTCTTTGCCTCCAGCCAAACCACATTaGAGGAGGTGTCATCCAACC | + |
Preference number: 4 (lower is better) Translates to: QQTIQLVPFKIMTLLSLPPAKPH*RRCHPT Trigger: GGTTGGATGACACCTCCTGCAATGTGGTTTGGCTGG...AGGCAAAGAAAGGAGTGTCATTATTTTGAATGGTACCAATTGTATGGTCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | ACAGCAGTTTCTTTCCTACAGTGGCCACAAAGCAAGTaGAACTCAAGTACAACAGACCATACAATTGGTACC | + |
Preference number: 4 (lower is better) Translates to: TAVSFLQWPQSK*NSSTTDHTIGT Trigger: GGTACCAATTGTATGGTCTGTTGTACTTGAGTTCAACTTGCTTTGTGGCCACTGTAGGAAAGAAACTGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | ACAGCTATGGGTGCTAGGAACCGAACTCTTATATTTTaGGTTGTAAGCCTATTTCCCCAGCCTGAGAAATTC | + |
Preference number: 4 (lower is better) Translates to: TAMGARNRTLIF*VVSLFPQPEKF Trigger: GAATTTCTCAGGCTGGGGAAATAGGCTTACAACCAAAAATATAAGAGTTCGGTTCCTAGCACCCATAGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | AACCTCATGATGCTAGCCTTCAATGTGGCGCCTGCCTaGGGATTTCCAAGAGGTATTTTGATTACTCAATTT | + |
Preference number: 4 (lower is better) Translates to: NLMMLAFNVAPA*GFPRGILITQF Trigger: AAATTGAGTAATCAAAATACCTCTTGGAAATCCCAAGGCAGGCGCCACATTGAAGGCTAGCATCATGAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR GCA 90 bp | ATAGGCAAATCCACAAGGACAGAAAGATTAGTAGTTGCCAGGTCTGAGGAGAGGGGACTCTACTTCATCTaGATACATGGTCATTTTCAT | + |
Preference number: 4 (lower is better) Translates to: IGKSTRTERLVVARSEERGLYFI*IHGHFH Trigger: ATGAAAATGACCATGTATGCAGATGAAGTAGAGTCC...CCTCTCCTCAGACCTGGCAACTACTAATCTTTCTGTCCTTGTGGATTTGCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR TCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCTTTTCATCTAAGAGATaGCGGACATCTGCAAATTTC | + |
Preference number: 4 (lower is better) Translates to: IRGHLNDMVLNCRANYFTFSSKR*RTSANF Trigger: GAAATTTGCAGATGTCCGTCATCTCTTAGATGAAAA...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | AATGTGGCGCCTGCCTTGGGATTTCCAAGAGGTATTTaGATTACTCAATTTTTACCTTGGGCATTGACTTAT | + |
Preference number: 4 (lower is better) Translates to: NVAPALGFPRGI*ITQFLPWALTY Trigger: ATAAGTCAATGCCCAAGGTAAAAATTGAGTAATCAAAATACCTCTTGGAAATCCCAAGGCAGGCGCCACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CCA 90 bp | ATAAGGGGCCATTTGAATGACATGGTTCTAAATTGCAGGGCCAACTACTTTACCCATGCCTCCATAATTTaGATTTCCATACTTCATGTA | + |
Preference number: 4 (lower is better) Translates to: IRGHLNDMVLNCRANYFTHASII*ISILHV Trigger: TACATGAAGTATGGAAATCCAAATTATGGAGGCATG...GGTAAAGTAGTTGGCCCTGCAATTTAGAACCATGTCATTCAAATGGCCCCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | ACACACTTCAAATTAGTAAACAATATTGGTGAAGACTaGATAAACTGGAATCCTGATATCCTCCATGGGAAC | + |
Preference number: 4 (lower is better) Translates to: THFKLVNNIGED*INWNPDILHGN Trigger: GTTCCCATGGAGGATATCAGGATTCCAGTTTATCAAGTCTTCACCAATATTGTTTACTAATTTGAAGTGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | AGAGGTATTTTGATTACTCAATTTTTACCTTGGGCATaGACTTATGATCTAACCCAGGAGTCAGCTAAGATT | + |
Preference number: 4 (lower is better) Translates to: RGILITQFLPWA*TYDLTQESAKI Trigger: AATCTTAGCTGACTCCTGGGTTAGATCATAAGTCAATGCCCAAGGTAAAAATTGAGTAATCAAAATACCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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3UTR CAA 72 bp | GTCAAACATTTCCACGCTGTTAGCTTTGGTCTGATATaGACTAGATCTTATACAATTATTCACAAGGAGATT | + |
Preference number: 4 (lower is better) Translates to: VKHFHAVSFGLI*TRSYTIIHKEI Trigger: AATCTCCTTGTGAATAATTGTATAAGATCTAGTCAATATCAGACCAAAGCTAACAGCGTGGAAATGTTTGAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | AGCGCCGCACCGGCACGATTTCCAGCTCGCCTTCTTCCACTTCCATaGGCTCCGGCTCGCCACGCTCCAAACCGGACTCCACCTCGGGCG | + |
Preference number: 5 (lower is better) Translates to: SAAPARFPARLLPLP*APARHAPNRTPPRA Trigger: CGCCCGAGGTGGAGTCCGGTTTGGAGCGTGGCGAGCCGGAGCCCATGGAAGTGGAAGAAGGCGAGCTGGAAATCGTGCCGGTGCGGCGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 90 bp | GAGCTGCTCGCACTGGATCGCCTAGACAGGCTCCGCTCACGGGGCTaGTTGAGACCTGGGAGCTCCTCATGGTACTCCACCACGACTCTG | + |
Preference number: 5 (lower is better) Translates to: ELLALDRLDRLRSRG*LRPGSSSWYSTTTL Trigger: CAGAGTCGTGGTGGAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCGGAGCCTGTCTAGGCGATCCAGTGCGAGCAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | GACAGGCTCCGCTCACGGGGCTGCTTGAGACCTGGGAGCTCCTCATaGTACTCCACCACGACTCTGTCATCGGCATCCATGTCCTGGTCC | + |
Preference number: 5 (lower is better) Translates to: DRLRSRGCLRPGSSS*YSTTTLSSASMSWS Trigger: GGACCAGGACATGGATGCCGATGACAGAGTCGTGGTGGAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCGGAGCCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | ACTGGATCGCCTAGACAGGCTCCGCTCACGGGGCTGCTTGAGACCTaGGAGCTCCTCATGGTACTCCACCACGACTCTGTCATCGGCATC | + |
Preference number: 5 (lower is better) Translates to: TGSPRQAPLTGLLET*ELLMVLHHDSVIGI Trigger: GATGCCGATGACAGAGTCGTGGTGGAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCGGAGCCTGTCTAGGCGATCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTCGCTCACGGGGCTGCTaGAGACCTGGGAGCTCCTCA | + |
Preference number: 5 (lower is better) Translates to: SQHLGSRASSVNSRPACSRSRGC*RPGSSS Trigger: TGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCG...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | TCCTCATGGTACTCCACCACGACTCTGTCATCGGCATCCATGTCCTaGTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCAATGGGT | + |
Preference number: 5 (lower is better) Translates to: SSWYSTTTLSSASMS*SSSSSSSSSSSSMG Trigger: ACCCATTGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGACCAGGACATGGATGCCGATGACAGAGTCGTGGTGGAGTACCATGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | GACTCTGCCTCTGAACCAGAGCTACTTTCCCGGCTGACTTCAATCTaGAGCGAAGGCAAGCTATCCAGCCGACTCTTCTTCTGGCGAGAC | + |
Preference number: 5 (lower is better) Translates to: DSASEPELLSRLTSI*SEGKLSSRLFFWRD Trigger: GTCTCGCCAGAAGAAGAGTCGGCTGGATAGCTTGCCTTCGCTCCAGATTGAAGTCAGCCGGGAAAGTAGCTCTGGTTCAGAGGCAGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGTTTCATATCTTCTGCTaGTGTCCGGGAGCAGTTCCT | + |
Preference number: 5 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGFHIFC*CPGAVP Trigger: AGGAACTGCTCCCGGACACAAGCAGAAGATATGAAA...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGGAACTGTCTTCCTGCTaGTCTTTCTTGTTCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGELSSC*SFLFFS Trigger: GGAGAAGAACAAGAAAGACAAGCAGGAAGACAGTTC...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 90 bp | CTTCTTCTGGCGAGACTCTTCTTTCTCCTTGATCAGAGCACCCCATaGTCTCTGAAGCTCCGAGTCATCTTCCTCAGCACCAGATGCCCT | + |
Preference number: 5 (lower is better) Translates to: LLLARLFFLLDQSTP*SLKLRVIFLSTRCP Trigger: AGGGCATCTGGTGCTGAGGAAGATGACTCGGAGCTTCAGAGAGCATGGGGTGCTCTGATCAAGGAGAAAGAAGAGTCTCGCCAGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | TCCCAGCACCTGGGAAGCAGAGCTTCCTCTGTGAACTCAAGACCAGCCTGTTCTGACTCTTCTTTCTCCTaGATCAGAGCACCCCATGCT | + |
Preference number: 5 (lower is better) Translates to: SQHLGSRASSVNSRPACSDSSFS*IRAPHA Trigger: AGCATGGGGTGCTCTGATCAAGGAGAAAGAAGAGTC...AGAACAGGCTGGTCTTGAGTTCACAGAGGAAGCTCTGCTTCCCAGGTGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS TCA 90 bp | AGCTATCCAGCCGACTCTTCTTCTGGCGAGACTCTTCTTTCTCCTTaGTCAGAGCACCCCATGCTCTCTGAAGCTCCGAGTCATCTTCCT | + |
Preference number: 5 (lower is better) Translates to: SYPADSSSGETLLSP*SEHPMLSEAPSHLP Trigger: AGGAAGATGACTCGGAGCTTCAGAGAGCATGGGGTGCTCTGATCAAGGAGAAAGAAGAGTCTCGCCAGAAGAAGAGTCGGCTGGATAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | ACTTCAATCTGGAGCGAAGGCAAGCTATCCAGCCGACTCTTCTTCTaGCGAGACTCTTCTTTCTCCTTGATCAGAGCACCCCATGCTCTC | + |
Preference number: 5 (lower is better) Translates to: TSIWSEGKLSSRLFF*RDSSFSLIRAPHAL Trigger: GAGAGCATGGGGTGCTCTGATCAAGGAGAAAGAAGAGTCTCGCCAGAAGAAGAGTCGGCTGGATAGCTTGCCTTCGCTCCAGATTGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 90 bp | ACCCCATGCTCTCTGAAGCTCCGAGTCATCTTCCTCAGCACCAGATaGCCTGTGATCCACTTTCTTCGTGTTCTTTTCTTTGGTCTTGGG | + |
Preference number: 5 (lower is better) Translates to: TPCSLKLRVIFLSTR*PVIHFLRVLFFGLG Trigger: CCCAAGACCAAAGAAAAGAACACGAAGAAAGTGGATCACAGGGCATCTGGTGCTGAGGAAGATGACTCGGAGCTTCAGAGAGCATGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | GCTCTCGTAGTGGATCTGGGCTGGGGTTGGGTTCCTAGCTCACAACTCTGCGGGGCTCCAAGTTCCTTTTaGTCATCTTTTGTAGCAAAT | + |
Preference number: 5 (lower is better) Translates to: ALVVDLGWGWVPSSQLCGAPSSF*SSFVAN Trigger: ATTTGCTACAAAAGATGACAAAAAGGAACTTGGAGC...CCCGCAGAGTTGTGAGCTAGGAACCCAACCCCAGCCCAGATCCACTACGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | CTTCCTGCTTGTCTTTCTTGTTCTTCTCCGACGACTTGTCTTCACTaGCATCTCTGCTTCTCATCTTATCCTGGGCTGGCAGAGAACTCA | + |
Preference number: 5 (lower is better) Translates to: LPACLSCSSPTTCLH*HLCFSSYPGLAENS Trigger: TGAGTTCTCTGCCAGCCCAGGATAAGATGAGAAGCAGAGATGCCAGTGAAGACAAGTCGTCGGAGAAGAACAAGAAAGACAAGCAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCCTCCACAAATGTAGATaGTCTCCAGTCTCACCTTGG | + |
Preference number: 5 (lower is better) Translates to: VFRHPRRGHQISLWMVVSLHKCR*SPVSPW Trigger: CCAAGGTGAGACTGGAGACAATCTACATTTGTGGAG...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTTTCTTTTCTTTGGTCTaGGGTGTAGATCCTAAGCGA | + |
Preference number: 5 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLFFSLV*GVDPKR Trigger: TCGCTTAGGATCTACACCCAAGACCAAAGAAAAGAA...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 90 bp | TCCACTTCTCCTTCTTCAGTCTCGTCGTCATCTGAACTGTCTTCCTaGTTGTCTTTCTTGTTCTTCTCCGACGACTTGTCTTCACTGGCA | + |
Preference number: 5 (lower is better) Translates to: STSPSSVSSSSELSS*LSFLFFSDDLSSLA Trigger: TGCCAGTGAAGACAAGTCGTCGGAGAAGAACAAGAAAGACAAGCAGGAAGACAGTTCAGATGACGACGAGACTGAAGAAGGAGAAGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | TCGCTGGTCCTCACTGGTCCAGGGGTAGAAGTGTCTGAGGTCACACAAAGTCTTCTTCGCTTCCATGAATaGCTAAGAATTCCTTTCATG | + |
Preference number: 5 (lower is better) Translates to: SLVLTGPGVEVSEVTQSLLRFHE*LRIPFM Trigger: CATGAAAGGAATTCTTAGCAATTCATGGAAGCGAAG...AAGACTTTGTGTGACCTCAGACACTTCTACCCCTGGACCAGTGAGGACCAGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 90 bp | CATGTCTCGGTCCAAGGCTACATTTCTCTGGGCAAGATTTACTTCTaGTCGAAAGTGGAAGCGCTTGGCTCGCTGTTCTTTCTTTTCAAT | + |
Preference number: 5 (lower is better) Translates to: HVSVQGYISLGKIYF*SKVEALGSLFFLFN Trigger: ATTGAAAAGAAAGAACAGCGAGCCAAGCGCTTCCACTTTCGAGCAGAAGTAAATCTTGCCCAGAGAAATGTAGCCTTGGACCGAGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGCGAAAGTGGAAGCGCTaGGCTCGCTGTTCTTTCTTT | + |
Preference number: 5 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRRKWKR*ARCSFF Trigger: AAAGAAAGAACAGCGAGCCAAGCGCTTCCACTTTCG...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCATACTTCATGTAGTATaGACTTCTTCTGGCTGCTCC | + |
Preference number: 5 (lower is better) Translates to: VFRHPRRGHQISLWMVVSILHVV*TSSGCS Trigger: GGAGCAGCCAGAAGAAGTCAATACTACATGAAGTAT...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | GTCTTCAGACACCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCTTCGTGTTCTTTTCTTaGGTCTTGGGTGTAGATCCT | + |
Preference number: 5 (lower is better) Translates to: VFRHPRRGHQISLWMVVSFVFFS*VLGVDP Trigger: AGGATCTACACCCAAGACCAAAGAAAAGAACACGAA...GCTCACAACCATCCATAATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS TCA 90 bp | ACTGCTGGCCGTGGACAGGAATGCTGCCTCTTTTCATCTAAGAGATaGCGGACATCTGCAAATTTCTCAGGAGGCAATTTGTTACCAATT | + |
Preference number: 5 (lower is better) Translates to: TAGRGQECCLFSSKR*RTSANFSGGNLLPI Trigger: AATTGGTAACAAATTGCCTCCTGAGAAATTTGCAGATGTCCGTCATCTCTTAGATGAAAAGAGGCAGCATTCCTGTCCACGGCCAGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | TCCAAGGCTACATTTCTCTGGGCAAGATTTACTTCTGCTCGAAAGTaGAAGCGCTTGGCTCGCTGTTCTTTCTTTTCAATTGCTTCCTTG | + |
Preference number: 5 (lower is better) Translates to: SKATFLWARFTSARK*KRLARCSFFSIASL Trigger: CAAGGAAGCAATTGAAAAGAAAGAACAGCGAGCCAAGCGCTTCCACTTTCGAGCAGAAGTAAATCTTGCCCAGAGAAATGTAGCCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGGTCTCCAGTCTCACCTaGGGAATTGCTTTCTTCATC | + |
Preference number: 5 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRVSSLT*GIAFFI Trigger: GATGAAGAAAGCAATTCCCAAGGTGAGACTGGAGAC...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGGTCTCACCTTGGGAATaGCTTTCTTCATCATGTCTC | + |
Preference number: 5 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRVSPWE*LSSSCL Trigger: GAGACATGATGAAGAAAGCAATTCCCAAGGTGAGAC...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS TCA 90 bp | TTAGCTGGACGAAGATCATTTCGTAACAGAGACTCTTCTTCTACCTaGGACAACGTGTCCAACTCTACATCACTTGAATTCTCATCTTCC | + |
Preference number: 5 (lower is better) Translates to: LAGRRSFRNRDSSST*DNVSNSTSLEFSSS Trigger: GGAAGATGAGAATTCAAGTGATGTAGAGTTGGACACGTTGTCTCAGGTAGAAGAAGAGTCTCTGTTACGAAATGATCTTCGTCCAGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | CAACAGACCATACAATTGGTACCATTCAAAATAATGACACTCCTTTCTTTGCCTTTCTTCTCCGACGACTaGTCTTCACTGGCATCTCTG | + |
Preference number: 5 (lower is better) Translates to: QQTIQLVPFKIMTLLSLPFFSDD*SSLASL Trigger: CAGAGATGCCAGTGAAGACAAGTCGTCGGAGAAGAA...AGGCAAAGAAAGGAGTGTCATTATTTTGAATGGTACCAATTGTATGGTCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 90 bp | GGACTCTACTTCATCTGCATACATGGTCATTTTCATGCTTTTCTTTaGGGAGGGAGTAGAAATCATCTTCAGTTCCAGATCATAGTCCAT | + |
Preference number: 5 (lower is better) Translates to: GLYFICIHGHFHAFL*GGSRNHLQFQIIVH Trigger: ATGGACTATGATCTGGAACTGAAGATGATTTCTACTCCCTCCCCAAAGAAAAGCATGAAAATGACCATGTATGCAGATGAAGTAGAGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | CAACAGACCATACAATTGGTACCATTCAAAATAATGACACTCCTTTCTTTGCCTTCCTGCTTGTCTTTCTaGTTCTTCTCCGACGACTTG | + |
Preference number: 5 (lower is better) Translates to: QQTIQLVPFKIMTLLSLPSCLSF*FFSDDL Trigger: CAAGTCGTCGGAGAAGAACAAGAAAGACAAGCAGGA...AGGCAAAGAAAGGAGTGTCATTATTTTGAATGGTACCAATTGTATGGTCTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | CAGCCAGCCTTTCCTCAAAAAGTGGAAGAATATTTGAAGATGAGCTCCACAAGGTCATGCCTCCATAATTaGGATTTCCATACTTCATGT | + |
Preference number: 5 (lower is better) Translates to: QPAFPQKVEEYLKMSSTRSCLHN*DFHTSC Trigger: ACATGAAGTATGGAAATCCAAATTATGGAGGCATGA...CCTTGTGGAGCTCATCTTCAAATATTCTTCCACTTTTTGAGGAAAGGCTGGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS-3UTR CAA 90 bp | CAACAGACCATACAATTGGTACCATTCAAAATAATGACACTCCTTTCTTTGCCTTTTCCTTTAGCAAGTTaGTTAGCTGGACGAAGATCA | + |
Preference number: 5 (lower is better) Translates to: QQTIQLVPFKIMTLLSLPFPLAS*LAGRRS Trigger: TGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAA...AGGCAAAGAAAGGAGTGTCATTATTTTGAATGGTACCAATTGTATGGTCTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 72 bp | GCACTGGATCGCCTAGACAGGCTCCGCTCACGGGGCTaGTTGAGACCTGGGAGCTCCTCATGGTACTCCACC | + |
Preference number: 6 (lower is better) Translates to: ALDRLDRLRSRG*LRPGSSSWYST Trigger: GGTGGAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCGGAGCCTGTCTAGGCGATCCAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CAA 72 bp | CTGGATCGCCTAGACAGGCTCCGCTCACGGGGCTGCTaGAGACCTGGGAGCTCCTCATGGTACTCCACCACG | + |
Preference number: 6 (lower is better) Translates to: LDRLDRLRSRGC*RPGSSSWYSTT Trigger: CGTGGTGGAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCGGAGCCTGTCTAGGCGATCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CAA 90 bp | CTGCTCGCACTGGATCGCCTAGACAGGCTCCGCTCACGGGGCTGCTaGAGACCTGGGAGCTCCTCATGGTACTCCACCACGACTCTGTCA | + |
Preference number: 6 (lower is better) Translates to: LLALDRLDRLRSRGC*RPGSSSWYSTTTLS Trigger: TGACAGAGTCGTGGTGGAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCGGAGCCTGTCTAGGCGATCCAGTGCGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 72 bp | CCTAGACAGGCTCCGCTCACGGGGCTGCTTGAGACCTaGGAGCTCCTCATGGTACTCCACCACGACTCTGTC | + |
Preference number: 6 (lower is better) Translates to: PRQAPLTGLLET*ELLMVLHHDSV Trigger: GACAGAGTCGTGGTGGAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCGGAGCCTGTCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 72 bp | CGCTCACGGGGCTGCTTGAGACCTGGGAGCTCCTCATaGTACTCCACCACGACTCTGTCATCGGCATCCATG | + |
Preference number: 6 (lower is better) Translates to: RSRGCLRPGSSS*YSTTTLSSASM Trigger: CATGGATGCCGATGACAGAGTCGTGGTGGAGTACCATGAGGAGCTCCCAGGTCTCAAGCAGCCCCGTGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 72 bp | TACTCCACCACGACTCTGTCATCGGCATCCATGTCCTaGTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCC | + |
Preference number: 6 (lower is better) Translates to: YSTTTLSSASMS*SSSSSSSSSSS Trigger: GGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGACCAGGACATGGATGCCGATGACAGAGTCGTGGTGGAGTA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 72 bp | GCGAGACTCTTCTTTCTCCTTGATCAGAGCACCCCATaGTCTCTGAAGCTCCGAGTCATCTTCCTCAGCACC | + |
Preference number: 6 (lower is better) Translates to: ARLFFLLDQSTP*SLKLRVIFLST Trigger: GGTGCTGAGGAAGATGACTCGGAGCTTCAGAGAGCATGGGGTGCTCTGATCAAGGAGAAAGAAGAGTCTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 72 bp | TGGAGCGAAGGCAAGCTATCCAGCCGACTCTTCTTCTaGCGAGACTCTTCTTTCTCCTTGATCAGAGCACCC | + |
Preference number: 6 (lower is better) Translates to: WSEGKLSSRLFF*RDSSFSLIRAP Trigger: GGGTGCTCTGATCAAGGAGAAAGAAGAGTCTCGCCAGAAGAAGAGTCGGCTGGATAGCTTGCCTTCGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS TCA 72 bp | TCTTCTTTCTCCTTGATCAGAGCACCCCATGCTCTCTaGAGCTCCGAGTCATCTTCCTCAGCACCAGATGCC | + |
Preference number: 6 (lower is better) Translates to: SSFSLIRAPHAL*SSESSSSAPDA Trigger: GGCATCTGGTGCTGAGGAAGATGACTCGGAGCTTCAGAGAGCATGGGGTGCTCTGATCAAGGAGAAAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 72 bp | TCTGAACCAGAGCTACTTTCCCGGCTGACTTCAATCTaGAGCGAAGGCAAGCTATCCAGCCGACTCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: SEPELLSRLTSI*SEGKLSSRLFF Trigger: GAAGAAGAGTCGGCTGGATAGCTTGCCTTCGCTCCAGATTGAAGTCAGCCGGGAAAGTAGCTCTGGTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CAA 72 bp | CTTCTCATCTTATCCTGGGCTGGCAGAGAACTCATATaGATGAGAGCTCGTGTGGCCGTCATCTCGTCCAGC | + |
Preference number: 6 (lower is better) Translates to: LLILSWAGRELI*MRARVAVISSS Trigger: GCTGGACGAGATGACGGCCACACGAGCTCTCATCAATATGAGTTCTCTGCCAGCCCAGGATAAGATGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CAA 90 bp | GCATCTCTGCTTCTCATCTTATCCTGGGCTGGCAGAGAACTCATATaGATGAGAGCTCGTGTGGCCGTCATCTCGTCCAGCCAAACCACA | + |
Preference number: 6 (lower is better) Translates to: ASLLLILSWAGRELI*MRARVAVISSSQTT Trigger: TGTGGTTTGGCTGGACGAGATGACGGCCACACGAGCTCTCATCAATATGAGTTCTCTGCCAGCCCAGGATAAGATGAGAAGCAGAGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CAA 90 bp | GCTTCCTTGGAGGTGACATCGATCCCAGTGATGAAGCTGCCAGCCTaGTTTTCATATCTTCTGCTTGTGTCCGGGAGCAGTTCCTTTAGG | + |
Preference number: 6 (lower is better) Translates to: ASLEVTSIPVMKLPA*FSYLLLVSGSSSFR Trigger: CCTAAAGGAACTGCTCCCGGACACAAGCAGAAGATATGAAAACAAGGCTGGCAGCTTCATCACTGGGATCGATGTCACCTCCAAGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CAA 72 bp | GAGGTGACATCGATCCCAGTGATGAAGCTGCCAGCCTaGTTTTCATATCTTCTGCTTGTGTCCGGGAGCAGT | + |
Preference number: 6 (lower is better) Translates to: EVTSIPVMKLPA*FSYLLLVSGSS Trigger: ACTGCTCCCGGACACAAGCAGAAGATATGAAAACAAGGCTGGCAGCTTCATCACTGGGATCGATGTCACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 72 bp | GTCCAAGGCTACATTTCTCTGGGCAAGATTTACTTCTaGTCGAAAGTGGAAGCGCTTGGCTCGCTGTTCTTT | + |
Preference number: 6 (lower is better) Translates to: VQGYISLGKIYF*SKVEALGSLFF Trigger: AAAGAACAGCGAGCCAAGCGCTTCCACTTTCGAGCAGAAGTAAATCTTGCCCAGAGAAATGTAGCCTTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 72 bp | TGTCTTTCTTGTTCTTCTCCGACGACTTGTCTTCACTaGCATCTCTGCTTCTCATCTTATCCTGGGCTGGCA | + |
Preference number: 6 (lower is better) Translates to: CLSCSSPTTCLH*HLCFSSYPGLA Trigger: TGCCAGCCCAGGATAAGATGAGAAGCAGAGATGCCAGTGAAGACAAGTCGTCGGAGAAGAACAAGAAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CAA 90 bp | ACATTTCTCTGGGCAAGATTTACTTCTGCTCGAAAGTGGAAGCGCTaGGCTCGCTGTTCTTTCTTTTCAATTGCTTCCTTGGAGGTGACA | + |
Preference number: 6 (lower is better) Translates to: TFLWARFTSARKWKR*ARCSFFSIASLEVT Trigger: TGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAACAGCGAGCCAAGCGCTTCCACTTTCGAGCAGAAGTAAATCTTGCCCAGAGAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS TCA 72 bp | CGTGGACAGGAATGCTGCCTCTTTTCATCTAAGAGATaGCGGACATCTGCAAATTTCTCAGGAGGCAATTTG | + |
Preference number: 6 (lower is better) Translates to: RGQECCLFSSKR*RTSANFSGGNL Trigger: CAAATTGCCTCCTGAGAAATTTGCAGATGTCCGTCATCTCTTAGATGAAAAGAGGCAGCATTCCTGTCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CCA 72 bp | ACATTTCTCTGGGCAAGATTTACTTCTGCTCGAAAGTaGAAGCGCTTGGCTCGCTGTTCTTTCTTTTCAATT | + |
Preference number: 6 (lower is better) Translates to: TFLWARFTSARK*KRLARCSFFSI Trigger: AATTGAAAAGAAAGAACAGCGAGCCAAGCGCTTCCACTTTCGAGCAGAAGTAAATCTTGCCCAGAGAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS CAA 90 bp | TCTTTTGTAGCAAATCTCATGAATAGTCTATTTCCTTTAGCAAGTTaGTTAGCTGGACGAAGATCATTTCGTAACAGAGACTCTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: SFVANLMNSLFPLAS*LAGRRSFRNRDSSS Trigger: AGAAGAAGAGTCTCTGTTACGAAATGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGACTATTCATGAGATTTGCTACAAAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |
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CDS GCA 72 bp | ATTTCCATACTTCATGTAGTATTGACTTCTTCTGGCTaGTCCAAGTTCCTTTTTGTCATCTTTTGTAGCAAA | + |
Preference number: 6 (lower is better) Translates to: ISILHVVLTSSG*SKFLFVIFCSK Trigger: TTTGCTACAAAAGATGACAAAAAGGAACTTGGAGCAGCCAGAAGAAGTCAATACTACATGAAGTATGGAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021135.5 |