Pregenerated sensors for NCAPH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034906Ensembl transcript IDs: ENSMUST00000110387.4, ENSMUST00000175885.8
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCATGTCTACGAAACCCAGATCCGGCAGCTCGAGGGGCTCTCCTaGGGAGAGGGTCTGCATGTCGGAAGGAAAGAGCAGCTCGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: CHVYETQIRQLEGLS*GEGLHVGRKEQLAS Trigger: AGAAGCGAGCTGCTCTTTCCTTCCGACATGCAGACCCTCTCCTCAGGAGAGCCCCTCGAGCTGCCGGATCTGGGTTTCGTAGACATGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR GCA 90 bp | AACCCGGCCAGGGATGGGCAGAGCGGGCGGTCTTCCACACACTGCTaGAAGGAAGCTTCTAAATCTGTCATGTCTACGAAACCCAGATCC | + |
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Preference number: 1 (lower is better) Translates to: NPARDGQSGRSSTHC*KEASKSVMSTKPRS Trigger: GGATCTGGGTTTCGTAGACATGACAGATTTAGAAGCTTCCTTGCAGCAGTGTGTGGAAGACCGCCCGCTCTGCCCATCCCTGGCCGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR GCA 90 bp | TGGAACCCGGCCAGGGATGGGCAGAGCGGGCGGTCTTCCACACACTaGTGCAAGGAAGCTTCTAAATCTGTCATGTCTACGAAACCCAGA | + |
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Preference number: 1 (lower is better) Translates to: WNPARDGQSGRSSTH*CKEASKSVMSTKPR Trigger: TCTGGGTTTCGTAGACATGACAGATTTAGAAGCTTCCTTGCAGCAGTGTGTGGAAGACCGCCCGCTCTGCCCATCCCTGGCCGGGTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 90 bp | ATGTGTTTCGCTGTCCCATTTAGTAAACTGGAACCCGGCCAGGGATaGGCAGAGCGGGCGGTCTTCCACACACTGCTGCAAGGAAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: MCFAVPFSKLEPGQG*AERAVFHTLLQGSF Trigger: GAAGCTTCCTTGCAGCAGTGTGTGGAAGACCGCCCGCTCTGCCCATCCCTGGCCGGGTTCCAGTTTACTAAATGGGACAGCGAAACACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 90 bp | GCCGACACAGACTCATTATGTGTTTCGCTGTCCCATTTAGTAAACTaGAACCCGGCCAGGGATGGGCAGAGCGGGCGGTCTTCCACACAC | + |
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Preference number: 1 (lower is better) Translates to: ADTDSLCVSLSHLVN*NPARDGQSGRSSTH Trigger: GTGTGTGGAAGACCGCCCGCTCTGCCCATCCCTGGCCGGGTTCCAGTTTACTAAATGGGACAGCGAAACACATAATGAGTCTGTGTCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 90 bp | GGAGGTAGCATCTTGCTTGGGTCGAGGCCTGAAGCGCCAGTGATCTaGGCCAGCCCACATCTTCATGGTCCGGGGACTGAAATAGGAATA | + |
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Preference number: 1 (lower is better) Translates to: GGSILLGSRPEAPVI*ASPHLHGPGTEIGI Trigger: TATTCCTATTTCAGTCCCCGGACCATGAAGATGTGGGCTGGCCCAGATCACTGGCGCTTCAGGCCTCGACCCAAGCAAGATGCTACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 90 bp | CGGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGTCTCAAAGTaGACTCAGTCCCCTTGCATCACCAGAACATCAGAAAGATCCTCT | + |
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Preference number: 1 (lower is better) Translates to: RPPGSHGHPAADVSK*TQSPCITRTSERSS Trigger: AGAGGATCTTTCTGATGTTCTGGTGATGCAAGGGGACTGAGTCCACTTTGAGACGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 90 bp | CGGAAGGAAAGAGCAGCTCGCTTCTGTAGTCCTGGCAGTGCAGCGTaGAGAGAAATACCCCAGTCGTGCTGCATTCATCAAAGGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: RKERAARFCSPGSAA*REIPQSCCIHQRRL Trigger: CAGCCTCCTTTGATGAATGCAGCACGACTGGGGTATTTCTCTCCACGCTGCACTGCCAGGACTACAGAAGCGAGCTGCTCTTTCCTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR GCA 90 bp | AGCCACTTCCTCGGGGGCACCTTCCTGTCCACTTTCAGTGTGGTTTaGCTCTGTGTCAGCCTCCTTCCTAGAAAACTTCGTCAGCAGACT | + |
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Preference number: 1 (lower is better) Translates to: SHFLGGTFLSTFSVV*LCVSLLPRKLRQQT Trigger: AGTCTGCTGACGAAGTTTTCTAGGAAGGAGGCTGACACAGAGGCAAACCACACTGAAAGTGGACAGGAAGGTGCCCCCGAGGAAGTGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 90 bp | TCATCAGCCACTTCCTCGGGGGCACCTTCCTGTCCACTTTCAGTGTaGTTTGCCTCTGTGTCAGCCTCCTTCCTAGAAAACTTCGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: SSATSSGAPSCPLSV*FASVSASFLENFVS Trigger: GCTGACGAAGTTTTCTAGGAAGGAGGCTGACACAGAGGCAAACCACACTGAAAGTGGACAGGAAGGTGCCCCCGAGGAAGTGGCTGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR GCA 90 bp | CGTGGAGAGAAATACCCCAGTCGTGCTGCATTCATCAAAGGAGGCTaGTGTCTTCTGAAACATAGGATCCACCGCACACTTCCCATCGGC | + |
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Preference number: 1 (lower is better) Translates to: RGEKYPSRAAFIKGG*CLLKHRIHRTLPIG Trigger: GCCGATGGGAAGTGTGCGGTGGATCCTATGTTTCAGAAGACAGCAGCCTCCTTTGATGAATGCAGCACGACTGGGGTATTTCTCTCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR GCA 90 bp | CTGACAGAGCTCCTTCCAGCTCCGGAACTCTTCATGGTCCCCAGCTaGAGAAAGGTCTGGCTCATCATTGTCAACAAAATCCTCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: LTELLPAPELFMVPS*RKVWLIIVNKILHQ Trigger: CTGGTGGAGGATTTTGTTGACAATGATGAGCCAGACCTTTCTGCAGCTGGGGACCATGAAGAGTTCCGGAGCTGGAAGGAGCTCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR GCA 90 bp | CATGGGCATCCCGCTGCAGACGTCTCAAAGTGGACTCAGTCCCCTTaGATCACCAGAACATCAGAAAGATCCTCTGTGCCTTCTAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: HGHPAADVSKWTQSP*ITRTSERSSVPSSF Trigger: GAAGCTAGAAGGCACAGAGGATCTTTCTGATGTTCTGGTGATGCAAGGGGACTGAGTCCACTTTGAGACGTCTGCAGCGGGATGCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR TCA 90 bp | AATACCCCAGTCGTGCTGCATTCATCAAAGGAGGCTGCTGTCTTCTaGAACATAGGATCCACCGCACACTTCCCATCGGCTTCCGAGACA | + |
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Preference number: 1 (lower is better) Translates to: NTPVVLHSSKEAAVF*NIGSTAHFPSASET Trigger: TGTCTCGGAAGCCGATGGGAAGTGTGCGGTGGATCCTATGTTTCAGAAGACAGCAGCCTCCTTTGATGAATGCAGCACGACTGGGGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR TCA 90 bp | AGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTACAGAATaGAAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGATAT | + |
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Preference number: 1 (lower is better) Translates to: RTERGYGEMILDSTE*KVGRSQKVTRAHGY Trigger: ATATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| 3UTR TCA 90 bp | ACATCCTCTTCATCGTCTTCAGCCTCAGCATTGATGTCAAATACTTaGTCATTCTTCTTAAACTTGTCCACCAGGGCCGACACAGACTCA | + |
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Preference number: 1 (lower is better) Translates to: TSSSSSSASALMSNT*SFFLNLSTRADTDS Trigger: TGAGTCTGTGTCGGCCCTGGTGGACAAGTTTAAGAAGAATGATCAAGTATTTGACATCAATGCTGAGGCTGAAGACGATGAAGAGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 90 bp | GGATCAGATTATCAGTTTCATAGTGGAAATCTGTGGGAAGAGTGGTaGCTTTCCAATTCTGGTTCTCCAAAGTGGACTTGGTCAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: GSDYQFHSGNLWEEW*LSNSGSPKWTWSEW Trigger: CCATTCTGACCAAGTCCACTTTGGAGAACCAGAATTGGAAAGCCACCACTCTTCCCACAGATTTCCACTATGAAACTGATAATCTGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 90 bp | GCTGGATCAGATTATCAGTTTCATAGTGGAAATCTGTGGGAAGAGTaGTGGCTTTCCAATTCTGGTTCTCCAAAGTGGACTTGGTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: AGSDYQFHSGNLWEE*WLSNSGSPKWTWSE Trigger: TTCTGACCAAGTCCACTTTGGAGAACCAGAATTGGAAAGCCACCACTCTTCCCACAGATTTCCACTATGAAACTGATAATCTGATCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGCGGGCGGTCTTCCACACACTGCTGCAAGGAAGCTTCTAAATCTGTCAGCCACCAGGAAGCCATaGGCATCCCGCTGCAGACGT | + |
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Preference number: 2 (lower is better) Translates to: GRAGGLPHTAARKLLNLSATRKP*ASRCRR Trigger: ACGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGC...TGACAGATTTAGAAGCTTCCTTGCAGCAGTGTGTGGAAGACCGCCCGCTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR TCA 90 bp | CATGGTCCCCAGCTGCAGAAAGGTCTGGCTCATCATTGTCAACAAAATCCTCCACTCGAGGGGCTCTCCTaGGGAGAGGGTCTGCATGTC | + |
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Preference number: 2 (lower is better) Translates to: HGPQLQKGLAHHCQQNPPLEGLS*GEGLHV Trigger: GACATGCAGACCCTCTCCTCAGGAGAGCCCCTCGAG...TGGAGGATTTTGTTGACAATGATGAGCCAGACCTTTCTGCAGCTGGGGACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGTCTCAAAGTGGACTCAGTTCAGTCTTAGCCTTCTaGTCCTGGTCCATCTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: GHQEAMGIPLQTSQSGLSSVLAF*SWSILS Trigger: ACTTAAGATGGACCAGGACCAGAAGGCTAAGACTGA...ACTGAGTCCACTTTGAGACGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCCCATCAGGGACATCCTCTTCATCGTCTTCAGCCTCAGCATTGATGTCAGAGGCTGCTGTCTTCTaGAACATAGGATCCACCGCA | + |
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Preference number: 2 (lower is better) Translates to: RGPSGTSSSSSSASALMSEAAVF*NIGSTA Trigger: TGCGGTGGATCCTATGTTTCAGAAGACAGCAGCCTC...TGACATCAATGCTGAGGCTGAAGACGATGAAGAGGATGTCCCTGATGGGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAATTTCCTCATAGTGCTCAGTCTTAGCCTTCTGGTCCTGGTCCATCTTAAGGCTTGGGTCGAGGCCTaGAGCGCCAGTGATCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: FNFLIVLSLSLLVLVHLKAWVEA*SASDLG Trigger: GCCCAGATCACTGGCGCTTCAGGCCTCGACCCAAGC...CTTAAGATGGACCAGGACCAGAAGGCTAAGACTGAGCACTATGAGGAAATTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTACAGAATGAAAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGATAGCCACCAGGAAGCCATaGGCATCCCGCTGCAGACGT | + |
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Preference number: 2 (lower is better) Translates to: QYRMKSGTVTESDQSTWIATRKP*ASRCRR Trigger: ACGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGC...TATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTTTCATTCTGTACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110387.4 ENSMUST00000175885.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTGCTCTGGACCTGACAGAGCTCCTTCCAGCTCCGGAACTCTTCATGGTCCCTCTTCCACACACTGCTaGAAGGAAGCTTCTAAATCT | + |
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Preference number: 2 (lower is better) Translates to: GCSGPDRAPSSSGTLHGPSSTHC*KEASKS Trigger: AGATTTAGAAGCTTCCTTGCAGCAGTGTGTGGAAGA...GGGACCATGAAGAGTTCCGGAGCTGGAAGGAGCTCTGTCAGGTCCAGAGCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTACTCCTTGGTTTTCAGGAGAAATGTGACCATTCTCTTGTGTTGTCTTTGGGGCCTGAAGCGCCAGTaGTCTGGGCCAGCCCACATC | + |
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Preference number: 2 (lower is better) Translates to: IYSLVFRRNVTILLCCLWGLKRQ*SGPAHI Trigger: GATGTGGGCTGGCCCAGATCACTGGCGCTTCAGGCC...CCAAAGACAACACAAGAGAATGGTCACATTTCTCCTGAAAACCAAGGAGTAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGTCCCCAGCTGCAGAAAGGTCTGGCTCATCATTGTCAACAAAATCCTCCACAGCATAGATCTTGGTaGTGGCATCCAAGGTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: HGPQLQKGLAHHCQQNPPQHRSW*WHPRCQ Trigger: CTGGCACCTTGGATGCCAGCACCAAGATCTATGCTG...TGGAGGATTTTGTTGACAATGATGAGCCAGACCTTTCTGCAGCTGGGGACCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGTCAGCCTCCTTCCTAGAAAACTTCGTCAGCAGACTCCACATACTCTGCCATAGATCTTGGTGCTaGCATCCAAGGTGCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SVSASFLENFVSRLHILCHRSWC*HPRCQQ Trigger: CTGCTGGCACCTTGGATGCCAGCACCAAGATCTATG...GCAGAGTATGTGGAGTCTGCTGACGAAGTTTTCTAGGAAGGAGGCTGACACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCTCCTTCCTAGAAAACTTCGTCAGCAGACTCCACATACTCTGCTTCAGCCTGGTCCATCTTAAGTaGCCTTTTGCCTGGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: SASFLENFVSRLHILCFSLVHLK*PFAWFE Trigger: CTCAAACCAGGCAAAAGGTCACTTAAGATGGACCAG...GCTGAAGCAGAGTATGTGGAGTCTGCTGACGAAGTTTTCTAGGAAGGAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CAA 90 bp | CTCCTTGGTTTTCAGGAGAAATGTGACCATTCTCTTGTGTTGTCTTaGGATCAGACTCAAGGTCAAGGGTCCCGACTGGATCCGCAAATA | + |
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Preference number: 2 (lower is better) Translates to: LLGFQEKCDHSLVLS*DQTQGQGSRLDPQI Trigger: TATTTGCGGATCCAGTCGGGACCCTTGACCTTGAGTCTGATCCAAAGACAACACAAGAGAATGGTCACATTTCTCCTGAAAACCAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CAA 90 bp | TATCTACTCCTTGGTTTTCAGGAGAAATGTGACCATTCTCTTGTGTaGTCTTTGGATCAGACTCAAGGTCAAGGGTCCCGACTGGATCCG | + |
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Preference number: 2 (lower is better) Translates to: YLLLGFQEKCDHSLV*SLDQTQGQGSRLDP Trigger: CGGATCCAGTCGGGACCCTTGACCTTGAGTCTGATCCAAAGACAACACAAGAGAATGGTCACATTTCTCCTGAAAACCAAGGAGTAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAATTTCCTCATAGTGCTCAGTCTTAGCCTTCTGGTCCTGGTCCATCTTAAGCTGTATACATCAGCATaGACGGCATCCACACGGACA | + |
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Preference number: 2 (lower is better) Translates to: FNFLIVLSLSLLVLVHLKLYTSA*TASTRT Trigger: TGTCCGTGTGGATGCCGTCCATGCTGATGTATACAG...CTTAAGATGGACCAGGACCAGAAGGCTAAGACTGAGCACTATGAGGAAATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTACTCCTTGGTTTTCAGGAGAAATGTGACCATTCTCTTGTGTTGTCTTTGGCTCCGGAACTCTTCATaGTCCCCAGCTGCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: IYSLVFRRNVTILLCCLWLRNSS*SPAAER Trigger: CCTTTCTGCAGCTGGGGACCATGAAGAGTTCCGGAG...CCAAAGACAACACAAGAGAATGGTCACATTTCTCCTGAAAACCAAGGAGTAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CAA 90 bp | ATAGGATCCACCGCACACTTCCCATCGGCTTCCGAGACATTGATATaGCTGAGATTCTGTTCAATGGTTTTGCAGGACTGCTTCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: IGSTAHFPSASETLI*LRFCSMVLQDCFFF Trigger: AAAGAAGAAGCAGTCCTGCAAAACCATTGAACAGAATCTCAGCAATATCAATGTCTCGGAAGCCGATGGGAAGTGTGCGGTGGATCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CAA 90 bp | GACATCCTCTTCATCGTCTTCAGCCTCAGCATTGATGTCAAATACTaGATCATTCTTCTTAAACTTGTCCACCAGGGCCGACACAGACTC | + |
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Preference number: 2 (lower is better) Translates to: DILFIVFSLSIDVKY*IILLKLVHQGRHRL Trigger: GAGTCTGTGTCGGCCCTGGTGGACAAGTTTAAGAAGAATGATCAAGTATTTGACATCAATGCTGAGGCTGAAGACGATGAAGAGGATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CAA 90 bp | TGTGATATCTACTCCTTGGTTTTCAGGAGAAATGTGACCATTCTCTaGTGTTGTCTTTGGATCAGACTCAAGGTCAAGGGTCCCGACTGG | + |
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Preference number: 2 (lower is better) Translates to: CDIYSLVFRRNVTIL*CCLWIRLKVKGPDW Trigger: CCAGTCGGGACCCTTGACCTTGAGTCTGATCCAAAGACAACACAAGAGAATGGTCACATTTCTCCTGAAAACCAAGGAGTAGATATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCTCCTTCCTAGAAAACTTCGTCAGCAGACTCCACATACTCTGCTTCAGCACTCTTGGTAAGTTGTaGTATCTACTCCTTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SASFLENFVSRLHILCFSTLGKL*YLLLGF Trigger: AAAACCAAGGAGTAGATATCACAACTTACCAAGAGT...GCTGAAGCAGAGTATGTGGAGTCTGCTGACGAAGTTTTCTAGGAAGGAGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CAA 90 bp | TCATCATCAAAATTAATTTCAAAGTCTTTCTTTGCACTCTTCTTTTaGTGCTCTGTGCAGGAGGTAGCATCTTGCTTGGGTCGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SSSKLISKSFFALFF*CSVQEVASCLGRGL Trigger: CAGGCCTCGACCCAAGCAAGATGCTACCTCCTGCACAGAGCACAAAAAGAAGAGTGCAAAGAAAGACTTTGAAATTAATTTTGATGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGTCCAGGACAATAGTTGGAGGTGTCGTTAGGGTTGTTGTAATCATAGTCAAAGTTGGTTGGTTCTaGATCTTTCTGCTTCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: LKSRTIVGGVVRVVVIIVKVGWF*IFLLQN Trigger: ATTCTGAAGCAGAAAGATGCAGAACCAACCAACTTT...GACTATGATTACAACAACCCTAACGACACCTCCAACTATTGTCCTGGACTTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 72 bp | CAGGCCCAGCACCTCTCCACGGCCACCAGGAAGCCATaGGCATCCCGCTGCAGACGTCTCAAAGTGGACTCA | + |
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Preference number: 3 (lower is better) Translates to: QAQHLSTATRKP*ASRCRRLKVDS Trigger: TGAGTCCACTTTGAGACGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCGTGGAGAGGTGCTGGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR GCA 72 bp | CTCTCCACGGCCACCAGGAAGCCATGGGCATCCCGCTaGAGACGTCTCAAAGTGGACTCAGTCCCCTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LSTATRKPWASR*RRLKVDSVPLH Trigger: ATGCAAGGGGACTGAGTCCACTTTGAGACGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCGTGGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR TCA 72 bp | TACGAAACCCAGATCCGGCAGCTCGAGGGGCTCTCCTaGGGAGAGGGTCTGCATGTCGGAAGGAAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: YETQIRQLEGLS*GEGLHVGRKEQ Trigger: CTGCTCTTTCCTTCCGACATGCAGACCCTCTCCTCAGGAGAGCCCCTCGAGCTGCCGGATCTGGGTTTCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 72 bp | ATCTTGCTTGGGTCGAGGCCTGAAGCGCCAGTGATCTaGGCCAGCCCACATCTTCATGGTCCGGGGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: ILLGSRPEAPVI*ASPHLHGPGTE Trigger: TTCAGTCCCCGGACCATGAAGATGTGGGCTGGCCCAGATCACTGGCGCTTCAGGCCTCGACCCAAGCAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGTCTCAAAGTGGACTCAGTTTCTCCAAAGTGGACTaGGTCAGAATGGTAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GHQEAMGIPLQTSQSGLSFSKVD*VRMVAA Trigger: GGCTGCTACCATTCTGACCAAGTCCACTTTGGAGAA...ACTGAGTCCACTTTGAGACGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR TCA 72 bp | AAAGGGCTTCCCTCTCCTAGGTGGACGTTACCCACGTaGGACCTTCCAACAGCATGGAGCTTCCTAGCGTGG | + |
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Preference number: 3 (lower is better) Translates to: KGLPSPRWTLPT*DLPTAWSFLAW Trigger: CCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTGGGTAACGTCCACCTAGGAGAGGGAAGCCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110387.4 ENSMUST00000175885.8 |
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| 3UTR GCA 72 bp | GCCAGGGATGGGCAGAGCGGGCGGTCTTCCACACACTaGTGCAAGGAAGCTTCTAAATCTGTCATGTCTACG | + |
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Preference number: 3 (lower is better) Translates to: ARDGQSGRSSTH*CKEASKSVMST Trigger: CGTAGACATGACAGATTTAGAAGCTTCCTTGCAGCAGTGTGTGGAAGACCGCCCGCTCTGCCCATCCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CCA 72 bp | GGAAGCCATGGGCATCCCGCTGCAGACGTCTCAAAGTaGACTCAGTCCCCTTGCATCACCAGAACATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: GSHGHPAADVSK*TQSPCITRTSE Trigger: TTCTGATGTTCTGGTGATGCAAGGGGACTGAGTCCACTTTGAGACGTCTGCAGCGGGATGCCCATGGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR GCA 72 bp | CCTGGCAGTGCAGCGTGGAGAGAAATACCCCAGTCGTaGTGCATTCATCAAAGGAGGCTGCTGTCTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PGSAAWREIPQS*CIHQRRLLSSE Trigger: TTCAGAAGACAGCAGCCTCCTTTGATGAATGCAGCACGACTGGGGTATTTCTCTCCACGCTGCACTGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR GCA 72 bp | CTCGGGGGCACCTTCCTGTCCACTTTCAGTGTGGTTTaGCTCTGTGTCAGCCTCCTTCCTAGAAAACTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LGGTFLSTFSVV*LCVSLLPRKLR Trigger: ACGAAGTTTTCTAGGAAGGAGGCTGACACAGAGGCAAACCACACTGAAAGTGGACAGGAAGGTGCCCCCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR GCA 72 bp | CCCGCTGCAGACGTCTCAAAGTGGACTCAGTCCCCTTaGATCACCAGAACATCAGAAAGATCCTCTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PAADVSKWTQSP*ITRTSERSSVP Trigger: AGGCACAGAGGATCTTTCTGATGTTCTGGTGATGCAAGGGGACTGAGTCCACTTTGAGACGTCTGCAGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR CCA 72 bp | AGAGCAGCTCGCTTCTGTAGTCCTGGCAGTGCAGCGTaGAGAGAAATACCCCAGTCGTGCTGCATTCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: RAARFCSPGSAA*REIPQSCCIHQ Trigger: TTGATGAATGCAGCACGACTGGGGTATTTCTCTCCACGCTGCACTGCCAGGACTACAGAAGCGAGCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR CCA 72 bp | ACTTCCTCGGGGGCACCTTCCTGTCCACTTTCAGTGTaGTTTGCCTCTGTGTCAGCCTCCTTCCTAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TSSGAPSCPLSV*FASVSASFLEN Trigger: GTTTTCTAGGAAGGAGGCTGACACAGAGGCAAACCACACTGAAAGTGGACAGGAAGGTGCCCCCGAGGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR GCA 72 bp | AGGGATGGGCAGAGCGGGCGGTCTTCCACACACTGCTaGAAGGAAGCTTCTAAATCTGTCATGTCTACGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RDGQSGRSSTHC*KEASKSVMSTK Trigger: TTTCGTAGACATGACAGATTTAGAAGCTTCCTTGCAGCAGTGTGTGGAAGACCGCCCGCTCTGCCCATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR GCA 72 bp | CTCCTTCCAGCTCCGGAACTCTTCATGGTCCCCAGCTaGAGAAAGGTCTGGCTCATCATTGTCAACAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: LLPAPELFMVPS*RKVWLIIVNKI Trigger: GATTTTGTTGACAATGATGAGCCAGACCTTTCTGCAGCTGGGGACCATGAAGAGTTCCGGAGCTGGAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGCCCATCAGGGACATCCTCTTCATCGTCTTCAGCCTCAGCATTGATGTCATCGGCTTCCGAGACATaGATATTGCTGAGATTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGPSGTSSSSSSASALMSSASET*ILLRFC Trigger: ACAGAATCTCAGCAATATCAATGTCTCGGAAGCCGA...TGACATCAATGCTGAGGCTGAAGACGATGAAGAGGATGTCCCTGATGGGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR GCA 72 bp | AAATACCCCAGTCGTGCTGCATTCATCAAAGGAGGCTaGTGTCTTCTGAAACATAGGATCCACCGCACACTT | + |
|
Preference number: 3 (lower is better) Translates to: KYPSRAAFIKGG*CLLKHRIHRTL Trigger: AAGTGTGCGGTGGATCCTATGTTTCAGAAGACAGCAGCCTCCTTTGATGAATGCAGCACGACTGGGGTATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAATCTGTGGGAAGAGTGGTGGCTTTCCAATTCTGGTTCTCCAAAGTGGACTTAGGTCTGGCTCATCATaGTCAACAAAATCCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: EICGKSGGFPILVLQSGLRSGSS*STKSST Trigger: GGTGGAGGATTTTGTTGACAATGATGAGCCAGACCT...AAGTCCACTTTGGAGAACCAGAATTGGAAAGCCACCACTCTTCCCACAGATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR CCA 72 bp | TTCAGGAGAAATGTGACCATTCTCTTGTGTTGTCTTTaGATCAGACTCAAGGTCAAGGGTCCCGACTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: FRRNVTILLCCL*IRLKVKGPDWI Trigger: GATCCAGTCGGGACCCTTGACCTTGAGTCTGATCCAAAGACAACACAAGAGAATGGTCACATTTCTCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR CCA 72 bp | TCCCCAGGTTTCATGGATAAAAAGGAGCACATGACTTaGATGTCTCTGTCCTCGAGGGAAATAACTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPGFMDKKEHMT*MSLSSREITSS Trigger: GGAAGAAGTTATTTCCCTCGAGGACAGAGACATCCAAGTCATGTGCTCCTTTTTATCCATGAAACCTGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR TCA 72 bp | TCATCGTCTTCAGCCTCAGCATTGATGTCAAATACTTaGTCATTCTTCTTAAACTTGTCCACCAGGGCCGAC | + |
|
Preference number: 3 (lower is better) Translates to: SSSSASALMSNT*SFFLNLSTRAD Trigger: GTCGGCCCTGGTGGACAAGTTTAAGAAGAATGATCAAGTATTTGACATCAATGCTGAGGCTGAAGACGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR CCA 72 bp | GCTGGATCAGATTATCAGTTTCATAGTGGAAATCTGTaGGAAGAGTGGTGGCTTTCCAATTCTGGTTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: AGSDYQFHSGNL*EEWWLSNSGSP Trigger: TGGAGAACCAGAATTGGAAAGCCACCACTCTTCCCACAGATTTCCACTATGAAACTGATAATCTGATCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR TCA 72 bp | ACAGTACAGAATGAAAAGTGGGACGGTCACAGAAAGTaGCCAGAGCACATGGATATAAAGATCAGACTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVQNEKWDGHRK*PEHMDIKIRLS Trigger: AGACAGTCTGATCTTTATATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTTTCATTCTGTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110387.4 ENSMUST00000175885.8 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGCACCTCTCCACGGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGGGGGGCAGCCTTGTCTaGAGGTCCTTTGTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPAPLHGHQEAMGIPLQTGGSLV*RSFVSP Trigger: TGGGCTCACAAAGGACCTGCAGACAAGGCTGCCCCC...CGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCGTGGAGAGGTGCTGGGCC 67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGCACCTCTCCACGGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGTGGCTCTCCTCTCCTTaGGGTGGTGTGTCTTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPAPLHGHQEAMGIPLQTWLSSP*GGVSLP Trigger: GGGCAAAGACACACCACCTCAAGGAGAGGAGAGCCA...CGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCGTGGAGAGGTGCTGGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGCACCTCTCCACGGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGCACCCGTTCCAAAGGTaGGGAAAGAACATCCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPAPLHGHQEAMGIPLQTHPFQR*GKNILL Trigger: CAACAGGATGTTCTTTCCTCACCTTTGGAACGGGTG...CGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCGTGGAGAGGTGCTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | GTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGAGAACCAGGCCTGAAGCGCCAGTaGTCTGGGCCAGCCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: VRPSNSMELPSVVASREPGLKRQ*SGPAHI Trigger: GATGTGGGCTGGCCCAGATCACTGGCGCTTCAGGCC...TGGTTCTCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGCACCTCTCCACGGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGACCTTTTGCCTGGTTTaGGGTGAAGCTGGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPAPLHGHQEAMGIPLQTTFCLV*GEAGSD Trigger: ATCTGATCCAGCTTCACCTCAAACCAGGCAAAAGGT...CGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCGTGGAGAGGTGCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | ACCGTGGTGGTTGGCTATAGCCACGCTACAGGCCCAGCACCTCTCCACGGCCACGAGGCTGCTGTCTTCTaGAACATAGGATCCACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVVVGYSHATGPAPLHGHEAAVF*NIGSTA Trigger: TGCGGTGGATCCTATGTTTCAGAAGACAGCAGCCTC...GTGGCCGTGGAGAGGTGCTGGGCCTGTAGCGTGGCTATAGCCAACCACCACGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR GCA 90 bp | ACCGTGGTGGTTGGCTATAGCCACGCTACAGGCCCAGCACCTCTCCACGGCCACCAGCATAGATCTTGGTaGTGGCATCCAAGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVVVGYSHATGPAPLHGHQHRSW*WHPRCQ Trigger: CTGGCACCTTGGATGCCAGCACCAAGATCTATGCTG...GTGGCCGTGGAGAGGTGCTGGGCCTGTAGCGTGGCTATAGCCAACCACCACGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR CCA 90 bp | GTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGAGAACCAGCAGGTCAAAGACCCTaGAGCGTCTCCGCTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VRPSNSMELPSVVASREPAGQRP*SVSAAS Trigger: GGATGCAGCGGAGACGCTCCAGGGTCTTTGACCTGC...TGGTTCTCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGCACCTCTCCACGGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGACTCTTGGTAAGTTGTaGTATCTACTCCTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPAPLHGHQEAMGIPLQTTLGKL*YLLLGF Trigger: AAAACCAAGGAGTAGATATCACAACTTACCAAGAGT...CGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCGTGGAGAGGTGCTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR GCA 90 bp | ACCCACGTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGATTCATGGTCCCCAGCTaGAGAAAGGTCTGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: THVRPSNSMELPSVVASRFMVPS*RKVWLI Trigger: GATGAGCCAGACCTTTCTGCAGCTGGGGACCATGAA...TCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR CCA 90 bp | ACCGTGGTGGTTGGCTATAGCCACGCTACAGGCCCAGCACCTCTCCACGGCCACGTGGCTTTCCAATTCTaGTTCTCCAAAGTGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVVVGYSHATGPAPLHGHVAFQF*FSKVDL Trigger: CAAGTCCACTTTGGAGAACCAGAATTGGAAAGCCAC...GTGGCCGTGGAGAGGTGCTGGGCCTGTAGCGTGGCTATAGCCAACCACCACGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTATAGCCACGCTACAGGCCCAGCACCTCTCCACGGCCACCAGGAAGCCTCTTCCACACACTGCTaGAAGGAAGCTTCTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: VGYSHATGPAPLHGHQEASSTHC*KEASKS Trigger: AGATTTAGAAGCTTCCTTGCAGCAGTGTGTGGAAGA...GGCTTCCTGGTGGCCGTGGAGAGGTGCTGGGCCTGTAGCGTGGCTATAGCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR CCA 90 bp | CACGTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGAGAACTGTATACATCAGCATaGACGGCATCCACACGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HVRPSNSMELPSVVASRELYTSA*TASTRT Trigger: TGTCCGTGTGGATGCCGTCCATGCTGATGTATACAG...TTCTCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| 3UTR CAA 72 bp | ACTCTTCTTTTTGTGCTCTGTGCAGGAGGTAGCATCTaGCTTGGGTCGAGGCCTGAAGCGCCAGTGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLFVLCAGGSI*LGSRPEAPVIW Trigger: CCAGATCACTGGCGCTTCAGGCCTCGACCCAAGCAAGATGCTACCTCCTGCACAGAGCACAAAAAGAAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| 3UTR CAA 72 bp | TCCCGCTGCAGACGTCTCAAAGTGGACTCAGTCCCCTaGCATCACCAGAACATCAGAAAGATCCTCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRCRRLKVDSVP*HHQNIRKILCA Trigger: GGCACAGAGGATCTTTCTGATGTTCTGGTGATGCAAGGGGACTGAGTCCACTTTGAGACGTCTGCAGCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGGCTATGGAGAAATGATTCTCGACAGTACAGAATGAAAAGTGGGACGGTCCTCGAGGGGCTCTCCTaGGGAGAGGGTCTGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRLWRNDSRQYRMKSGTVLEGLS*GEGLHV Trigger: GACATGCAGACCCTCTCCTCAGGAGAGCCCCTCGAG...GACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCCACATCTTCATGGTCCGGGGACTGAAATAGGAATATTCCCCAGGTTTGCGGAATTCTCATCTTaGTCTCCACGTCTCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASPHLHGPGTEIGIFPRFAEFSS*SPRLRS Trigger: ACTCCGGAGACGTGGAGAGCAAGATGAGAATTCCGC...AAACCTGGGGAATATTCCTATTTCAGTCCCCGGACCATGAAGATGTGGGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| CDS-3UTR CCA 90 bp | CACGTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGAGAATCAGTCTTAGCCTTCTaGTCCTGGTCCATCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVRPSNSMELPSVVASRESVLAF*SWSILS Trigger: ACTTAAGATGGACCAGGACCAGAAGGCTAAGACTGA...TTCTCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | GTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGAGAACCATTTTCATCGTCATTCTaGGGAAAGTCTTCGAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VRPSNSMELPSVVASREPFSSSF*GKSSRT Trigger: AGTCCTCGAAGACTTTCCTCAGAATGACGATGAAAA...TGGTTCTCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR GCA 90 bp | CACGTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGAGAATTCATCAAAGGAGGCTaGTGTCTTCTGAAACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVRPSNSMELPSVVASREFIKGG*CLLKHR Trigger: CCTATGTTTCAGAAGACAGCAGCCTCCTTTGATGAA...TTCTCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | CTATGGAGAAATGATTCTCGACAGTACAGAATGAAAAGTGGGACGGTCACAGAAAGAGGTTCTGAGCCATaGGCGGGGGCAGCCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWRNDSRQYRMKSGTVTERGSEP*AGAALS Trigger: AGACAAGGCTGCCCCCGCTCATGGCTCAGAACCTCT...TTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR CCA 90 bp | CACGTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGAGAATCATGTCCATCTTTTTaGCAGTCTTGGCGTAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HVRPSNSMELPSVVASRESCPSF*QSWRNE Trigger: TTCATTACGCCAAGACTGCCAAAAAGATGGACATGA...TTCTCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | GTACATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTGCTTGGGTCGAGGCCTaGAGCGCCAGTGATCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHRSGNSLRTERGYGEMIAWVEA*SASDLG Trigger: GCCCAGATCACTGGCGCTTCAGGCCTCGACCCAAGC...AATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| 3UTR CAA 72 bp | GGATCCACCGCACACTTCCCATCGGCTTCCGAGACATaGATATTGCTGAGATTCTGTTCAATGGTTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSTAHFPSASET*ILLRFCSMVLQ Trigger: CTGCAAAACCATTGAACAGAATCTCAGCAATATCAATGTCTCGGAAGCCGATGGGAAGTGTGCGGTGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
||
| CDS-3UTR TCA 90 bp | GTACATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTGGTATGGAGAGGTTCTaGGCCATGAGCGGGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHRSGNSLRTERGYGEMIGMERF*AMSGGS Trigger: GCTGCCCCCGCTCATGGCTCAGAACCTCTCCATACC...AATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR CCA 90 bp | AAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGATATAAAGATCAGACTGGACAGCATAGATCTTaGTGCTGGCATCCAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVGRSQKVTRAHGYKDQTGQHRS*CWHPRC Trigger: GCACCTTGGATGCCAGCACCAAGATCTATGCTGTCC...AGTCTGATCTTTATATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR TCA 90 bp | AAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGATATAAAGATCAGACTCTGGTCCATCTTAAGTaGCCTTTTGCCTGGTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVGRSQKVTRAHGYKDQTLVHLK*PFAWFE Trigger: CTCAAACCAGGCAAAAGGTCACTTAAGATGGACCAG...AGTCTGATCTTTATATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCTATGGAGAAATGATTCTCGACAGTACAGAATGAAAAGTGGGACGGTCGAATCTGTACTGAACTaGAGGTCAAAGACCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLWRNDSRQYRMKSGTVESVLN*RSKTLE Trigger: CTCCAGGGTCTTTGACCTGCAGTTCAGTACAGATTC...GACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR GCA 90 bp | CGACAGTACAGAATGAAAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGTCTGTTCAATGGTTTTaGAGGACTGCTTCTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQYRMKSGTVTESDQSTWSVQWF*RTASSL Trigger: CAAAGAAGAAGCAGTCCTGCAAAACCATTGAACAGA...CCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCTATGGAGAAATGATTCTCGACAGTACAGAATGAAAAGTGGGACGGTCACTTTCAGTGTGGTTTaGCTCTGTGTCAGCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLWRNDSRQYRMKSGTVTFSVV*LCVSLL Trigger: AAGGAGGCTGACACAGAGGCAAACCACACTGAAAGT...GACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR CCA 90 bp | CTATGGAGAAATGATTCTCGACAGTACAGAATGAAAAGTGGGACGGTCACAGAAAAGGAGCACATGACTTaGATGTCTCTGTCCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWRNDSRQYRMKSGTVTEKEHMT*MSLSSR Trigger: CCTCGAGGACAGAGACATCCAAGTCATGTGCTCCTT...TTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR CCA 90 bp | GAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTACAGAGAAGCGCCAGTGATCTaGGCCAGCCCACATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EFFKDRKRLWRNDSRQYREAPVI*ASPHLH Trigger: ATGAAGATGTGGGCTGGCCCAGATCACTGGCGCTTC...TCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
||
| CDS-3UTR CCA 90 bp | CTATGGAGAAATGATTCTCGACAGTACAGAATGAAAAGTGGGACGGTCACAGAATGTCCACTTTCAGTGTaGTTTGCCTCTGTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWRNDSRQYRMKSGTVTECPLSV*FASVSA Trigger: GGCTGACACAGAGGCAAACCACACTGAAAGTGGACA...TTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| 3UTR CAA 72 bp | CTTGGTTTTCAGGAGAAATGTGACCATTCTCTTGTGTaGTCTTTGGATCAGACTCAAGGTCAAGGGTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: LGFQEKCDHSLV*SLDQTQGQGSR Trigger: TCGGGACCCTTGACCTTGAGTCTGATCCAAAGACAACACAAGAGAATGGTCACATTTCTCCTGAAAACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| CDS-3UTR CCA 90 bp | GTACATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCCGGAACTCTTCATaGTCCCCAGCTGCAGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VHRSGNSLRTERGYGEMILRNSS*SPAAER Trigger: CCTTTCTGCAGCTGGGGACCATGAAGAGTTCCGGAG...AATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR TCA 90 bp | TCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTGAATCGAATCTGTACTaGACTGCAGGTCAAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: SGNSLRTERGYGEMILDSESNLY*TAGQRP Trigger: GGGTCTTTGACCTGCAGTTCAGTACAGATTCGATTC...ACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR GCA 90 bp | AAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGATATAAAGATCAGACTATGGTTTTGCAGGACTaGTTCTTCTTTGGCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: KVGRSQKVTRAHGYKDQTMVLQD*FFFGFA Trigger: TGCAAAGCCAAAGAAGAAGCAGTCCTGCAAAACCAT...AGTCTGATCTTTATATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR GCA 90 bp | TCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTGCACTCTTCTTTTTGTaGTCTGTGCAGGAGGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: SGNSLRTERGYGEMILDSALFFL*SVQEVA Trigger: TGCTACCTCCTGCACAGAGCACAAAAAGAAGAGTGC...ACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CCA 90 bp | GTACATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCATAGATCTTGGTGCTaGCATCCAAGGTGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VHRSGNSLRTERGYGEMIHRSWC*HPRCQQ Trigger: CTGCTGGCACCTTGGATGCCAGCACCAAGATCTATG...AATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CCA 90 bp | GTACATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTTCCCATTTAGTAAACTaGAACCCGGCCAGGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: VHRSGNSLRTERGYGEMISHLVN*NPARDG Trigger: CCCATCCCTGGCCGGGTTCCAGTTTACTAAATGGGA...AATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CCA 90 bp | CTATGGAGAAATGATTCTCGACAGTACAGAATGAAAAGTGGGACGGTCACAGAAAATCTGTGGGAAGAGTaGTGGCTTTCCAATTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LWRNDSRQYRMKSGTVTENLWEE*WLSNSG Trigger: ACCAGAATTGGAAAGCCACCACTCTTCCCACAGATT...TTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| 3UTR CAA 72 bp | TACTCCTTGGTTTTCAGGAGAAATGTGACCATTCTCTaGTGTTGTCTTTGGATCAGACTCAAGGTCAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: YSLVFRRNVTIL*CCLWIRLKVKG Trigger: ACCCTTGACCTTGAGTCTGATCCAAAGACAACACAAGAGAATGGTCACATTTCTCCTGAAAACCAAGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| 3UTR CAA 72 bp | ATTCACCTTTTGAGGCTCAGCCACCAAGTTCAACTCTaGGTAAGTTGTGATATCTACTCCTTGGTTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IHLLRLSHQVQL*VSCDIYSLVFR Trigger: CCTGAAAACCAAGGAGTAGATATCACAACTTACCAAGAGTTGAACTTGGTGGCTGAGCCTCAAAAGGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| CDS-3UTR CCA 90 bp | GAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTACAGACTGTGGGAAGAGTGGTaGCTTTCCAATTCTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: EFFKDRKRLWRNDSRQYRLWEEW*LSNSGS Trigger: AGAACCAGAATTGGAAAGCCACCACTCTTCCCACAG...TCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CCA 90 bp | GAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTACAGACATAGTGGAAATCTGTaGGAAGAGTGGTGGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: EFFKDRKRLWRNDSRQYRHSGNL*EEWWLS Trigger: GGAAAGCCACCACTCTTCCCACAGATTTCCACTATG...TCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR TCA 90 bp | GAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTACAGATTGCCTGGTTTGAGGTaGAGCTGGATCAGATTATCA | + |
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Preference number: 4 (lower is better) Translates to: EFFKDRKRLWRNDSRQYRLPGLR*SWIRLS Trigger: TGATAATCTGATCCAGCTTCACCTCAAACCAGGCAA...TCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR TCA 90 bp | CTATGGAGAAATGATTCTCGACAGTACAGAATGAAAAGTGGGACGGTCACAGAATTTTCAGGAGAAATGTaGCCATTCTCTTGTGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LWRNDSRQYRMKSGTVTEFSGEM*PFSCVV Trigger: GACAACACAAGAGAATGGTCACATTTCTCCTGAAAA...TTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCGAGAATCATTTCTCCATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR GCA 90 bp | AAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGATATAAAGATCAGACTAAAGTTGGTTGGTTCTaGATCTTTCTGCTTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: KVGRSQKVTRAHGYKDQTKVGWF*IFLLQN Trigger: ATTCTGAAGCAGAAAGATGCAGAACCAACCAACTTT...AGTCTGATCTTTATATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| 3UTR CAA 72 bp | AGTCTTGGCGTAATGAATTTCTATTTTATTCACCTTTaGAGGCTCAGCCACCAAGTTCAACTCTTGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLGVMNFYFIHL*RLSHQVQLLVS Trigger: ACTTACCAAGAGTTGAACTTGGTGGCTGAGCCTCAAAAGGTGAATAAAATAGAAATTCATTACGCCAAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| CDS-3UTR TCA 90 bp | GTACATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTTCAGAATCTCTGACATaGAATCAATCAAATGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VHRSGNSLRTERGYGEMISESLT*NQSNAS Trigger: GCTTGCATTTGATTGATTTCATGTCAGAGATTCTGA...AATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATGTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | GGCAGCTCGAGGGGCTCTCCTGAGGAGAGGGTCTGCATGTCGGAAGGAAAGAGCCGCGGAATTCTCATCTaGCTCTCCACGTCTCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: GSSRGSPEERVCMSEGKSRGILI*LSTSPE Trigger: CTCCGGAGACGTGGAGAGCAAGATGAGAATTCCGCG...GCTCTTTCCTTCCGACATGCAGACCCTCTCCTCAGGAGAGCCCCTCGAGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| CDS-3UTR CAA 90 bp | GGCCCAGCACCTCTCCACGGCCACCAGGAAGCCATGGGCATCCCGCTGCAGACGTATTTTATTCACCTTTaGAGGCTCAGCCACCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GPAPLHGHQEAMGIPLQTYFIHL*RLSHQV Trigger: AACTTGGTGGCTGAGCCTCAAAAGGTGAATAAAATA...CGTCTGCAGCGGGATGCCCATGGCTTCCTGGTGGCCGTGGAGAGGTGCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | ACCCACGTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGACACTTTCAGTGTGGTTaGCCTCTGTGTCAGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: THVRPSNSMELPSVVASRHFQCG*PLCQPP Trigger: AGGAGGCTGACACAGAGGCAAACCACACTGAAAGTG...TCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | ACCCACGTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGATTCTCCAAAGTGGACTaGGTCAGAATGGTAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: THVRPSNSMELPSVVASRFSKVD*VRMVAA Trigger: GGCTGCTACCATTCTGACCAAGTCCACTTTGGAGAA...TCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | ACCCACGTGAGACCTTCCAACAGCATGGAGCTTCCTAGCGTGGTGGCATCCCGAGACCATTCTCTTGTGTaGTCTTTGGATCAGACTCAA | + |
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Preference number: 5 (lower is better) Translates to: THVRPSNSMELPSVVASRDHSLV*SLDQTQ Trigger: TTGAGTCTGATCCAAAGACAACACAAGAGAATGGTC...TCGGGATGCCACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | CGACAGTACAGAATGAAAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGGAAAAGAGCTATTCATaGTTTCTGAGCGCGGAATTC | + |
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Preference number: 5 (lower is better) Translates to: RQYRMKSGTVTESDQSTWEKSYS*FLSAEF Trigger: GAATTCCGCGCTCAGAAACAATGAATAGCTCTTTTC...CCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | CAGTACAGAATGAAAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGATATCATTCTTCTTAAACTaGTCCACCAGGGCCGACACA | + |
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Preference number: 5 (lower is better) Translates to: QYRMKSGTVTESDQSTWISFFLN*STRADT Trigger: TGTGTCGGCCCTGGTGGACAAGTTTAAGAAGAATGA...TATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTTTCATTCTGTACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS TCA 90 bp | GATATGGTAGTTGAAACATCAATATTCCTGTTAGGGGAGGCCAGATaGATCGAATCTGTACTGAACTGCAGGTCAAAGACCCTGGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: DMVVETSIFLLGEAR*IESVLNCRSKTLER Trigger: ACGCTCCAGGGTCTTTGACCTGCAGTTCAGTACAGATTCGATTCATCTGGCCTCCCCTAACAGGAATATTGATGTTTCAACTACCATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | CGACAGTACAGAATGAAAAGTGGGACGGTCACAGAAAGTGACCAGAGCACATGGTTCTGTTCAATGGTTTaGCAGGACTGCTTCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: RQYRMKSGTVTESDQSTWFCSMV*QDCFFF Trigger: AAAGAAGAAGCAGTCCTGCAAAACCATTGAACAGAA...CCATGTGCTCTGGTCACTTTCTGTGACCGTCCCACTTTTCATTCTGTACTGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | TCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTAGGTCTGGCTCATCATaGTCAACAAAATCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: SGNSLRTERGYGEMILDSRSGSS*STKSST Trigger: GGTGGAGGATTTTGTTGACAATGATGAGCCAGACCT...ACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | GAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTACAGATCGGCTTCCGAGACATaGATATTGCTGAGATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: EFFKDRKRLWRNDSRQYRSASET*ILLRFC Trigger: ACAGAATCTCAGCAATATCAATGTCTCGGAAGCCGA...TCTGTACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | CATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCTTTGCACTCTTCTTTTaGTGCTCTGTGCAGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: HRSGNSLRTERGYGEMILFALFF*CSVQEV Trigger: TACCTCCTGCACAGAGCACAAAAAGAAGAGTGCAAA...GAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | TCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCGACAGTTCCGAGACATTGATATaGCTGAGATTCTGTTCAATG | + |
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Preference number: 5 (lower is better) Translates to: SGNSLRTERGYGEMILDSSETLI*LRFCSM Trigger: CATTGAACAGAATCTCAGCAATATCAATGTCTCGGA...ACTGTCGAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | CATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCTCTCTTGTGTTGTCTTaGGATCAGACTCAAGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: HRSGNSLRTERGYGEMILSLVLS*DQTQGQ Trigger: TTGACCTTGAGTCTGATCCAAAGACAACACAAGAGA...GAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS-3UTR CAA 90 bp | CATAGATCTGGGAATTCTTTAAGGACAGAAAGAGGCTATGGAGAAATGATTCTCAATGTGACCATTCTCTaGTGTTGTCTTTGGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: HRSGNSLRTERGYGEMILNVTIL*CCLWIR Trigger: TCTGATCCAAAGACAACACAAGAGAATGGTCACATT...GAGAATCATTTCTCCATAGCCTCTTTCTGTCCTTAAAGAATTCCCAGATCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS TCA 90 bp | CACTTTAAAGTTGGTTGGTTCTGCATCTTTCTGCTTCAGAATCTCTaGCATGAAATCAATCAAATGCAAGCCGAAAGCATTCTTAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: HFKVGWFCIFLLQNL*HEINQMQAESILSS Trigger: ACTACTAAGAATGCTTTCGGCTTGCATTTGATTGATTTCATGTCAGAGATTCTGAAGCAGAAAGATGCAGAACCAACCAACTTTAAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS TCA 90 bp | GTAATGTTCTGTAATCTGTGTGTTTGTAAACTTAGATATGGTAGTTaGAACATCAATATTCCTGAGCGCGGAATTCTCATCTTGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: VMFCNLCVCKLRYGS*NINIPERGILILLS Trigger: GGAGAGCAAGATGAGAATTCCGCGCTCAGGAATATTGATGTTTCAACTACCATATCTAAGTTTACAAACACACAGATTACAGAACATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175885.8 |
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| CDS TCA 90 bp | GTAATGTTCTGTAATCTGTGTGTTTGTAAACTTAGATATGGTAGTTaGAACATCAATATTCCTGTTAGGGGAGGCCAGATGAATCGAATC | + |
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Preference number: 5 (lower is better) Translates to: VMFCNLCVCKLRYGS*NINIPVRGGQMNRI Trigger: GATTCGATTCATCTGGCCTCCCCTAACAGGAATATTGATGTTTCAACTACCATATCTAAGTTTACAAACACACAGATTACAGAACATTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS TCA 72 bp | CCCGGGCCGGGATGCTGGGGGCACCCGTTCCAAAGGTaGGGAAAGAACATCCTGTTGTCCTCGGGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: PGPGCWGHPFQR*GKNILLSSGLQ Trigger: CTGAAGGCCCGAGGACAACAGGATGTTCTTTCCTCACCTTTGGAACGGGTGCCCCCAGCATCCCGGCCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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| CDS TCA 72 bp | GTTGAAACATCAATATTCCTGTTAGGGGAGGCCAGATaGATCGAATCTGTACTGAACTGCAGGTCAAAGACC | + |
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Preference number: 6 (lower is better) Translates to: VETSIFLLGEAR*IESVLNCRSKT Trigger: GGTCTTTGACCTGCAGTTCAGTACAGATTCGATTCATCTGGCCTCCCCTAACAGGAATATTGATGTTTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110387.4 |
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