Pregenerated sensors for NCAN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002341Ensembl transcript IDs: ENSMUST00000002412.9
Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACGAAACTGCCACACACGACGGCGTATGCCTGTCACCTTCAGGTaGTTGAGAAAGGATGATTGCTGTGGCCTGAAACCCAGCCTAGGC | + |
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Preference number: 1 (lower is better) Translates to: PRNCHTRRRMPVTFR*LRKDDCCGLKPSLG Trigger: GCCTAGGCTGGGTTTCAGGCCACAGCAATCATCCTTTCTCAACCACCTGAAGGTGACAGGCATACGCCGTCGTGTGTGGCAGTTTCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR TCA 90 bp | CACACGACGGCGTATGCCTGTCACCTTCAGGTGGTTGAGAAAGGATaGTTGCTGTGGCCTGAAACCCAGCCTAGGCTCTGGAGATCTTAC | + |
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Preference number: 1 (lower is better) Translates to: HTTAYACHLQVVEKG*LLWPETQPRLWRSY Trigger: GTAAGATCTCCAGAGCCTAGGCTGGGTTTCAGGCCACAGCAATCATCCTTTCTCAACCACCTGAAGGTGACAGGCATACGCCGTCGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR GCA 90 bp | GAAGTCACCCTTGGGGGATCCCAGGAGATGGCAGGCCATCATGTTTaGTCTGCTGGTCCTCCACTCAGATACAGTGACTTTAGCCAAACC | + |
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Preference number: 1 (lower is better) Translates to: EVTLGGSQEMAGHHV*SAGPPLRYSDFSQT Trigger: GGTTTGGCTAAAGTCACTGTATCTGAGTGGAGGACCAGCAGAGCAAACATGATGGCCTGCCATCTCCTGGGATCCCCCAAGGGTGACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR CCA 90 bp | GCACCATCTTGGTTCAGGCAGAAGGTTGTCTGTCTCCCTGAGAGATaGAGGGGGAGGATACAGCAGCATCCAGCACATTGTACTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: APSWFRQKVVCLPER*RGRIQQHPAHCTPL Trigger: CAGTGGAGTACAATGTGCTGGATGCTGCTGTATCCTCCCCCTCCATCTCTCAGGGAGACAGACAACCTTCTGCCTGAACCAAGATGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR GCA 90 bp | TGTGCACACGGGTGTGGGAGATTTTTCATCACAAAGCCACGAAACTaGCACACACGACGGCGTATGCCTGTCACCTTCAGGTGGTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: CAHGCGRFFITKPRN*HTRRRMPVTFRWLR Trigger: TCTCAACCACCTGAAGGTGACAGGCATACGCCGTCGTGTGTGGCAGTTTCGTGGCTTTGTGATGAAAAATCTCCCACACCCGTGTGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR GCA 90 bp | GGCTCCACTGTGGCTTTAACACAAATTCATAGATTCTACCCACACTaGATGGGCTCTGTGAGGGACCCTGTCCCTGGCTTGGGAAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: GSTVALTQIHRFYPH*MGSVRDPVPGLGSL Trigger: AAGACTTCCCAAGCCAGGGACAGGGTCCCTCACAGAGCCCATGCAGTGTGGGTAGAATCTATGAATTTGTGTTAAAGCCACAGTGGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR GCA 90 bp | TTTAAAACATGGGTCCCAGGGCTTAAACGGACTTCTTCAGGCTTATaGAGCATCTTTACCCACAGGGCTAAGCTCAGGCTCCACTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: FKTWVPGLKRTSSGL*SIFTHRAKLRLHCG Trigger: GCCACAGTGGAGCCTGAGCTTAGCCCTGTGGGTAAAGATGCTGCATAAGCCTGAAGAAGTCCGTTTAAGCCCTGGGACCCATGTTTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR GCA 90 bp | GCTTTGTCCCCAGTCACAGGGACCTTTACGGATCAGGGTCCAGTTTaGTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: ALSPVTGTFTDQGPV*FSQPFPKSARVCVC Trigger: ACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGCAAACTGGACCCTGATCCGTAAAGGTCCCTGTGACTGGGGACAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR CCA 90 bp | TCTGCTAAAAAGACAGGCTCTGGGTTAGAAAACATGGCACCATCTTaGTTCAGGCAGAAGGTTGTCTGTCTCCCTGAGAGATGGAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: SAKKTGSGLENMAPS*FRQKVVCLPERWRG Trigger: CCCCCTCCATCTCTCAGGGAGACAGACAACCTTCTGCCTGAACCAAGATGGTGCCATGTTTTCTAACCCAGAGCCTGTCTTTTTAGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR GCA 90 bp | ATACAGCAGCATCCAGCACATTGTACTCCACTGATCTCACTTCTGTaGACACGGGTGTGGGAGATTTTTCATCACAAAGCCACGAAACTG | + |
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Preference number: 1 (lower is better) Translates to: IQQHPAHCTPLISLL*TRVWEIFHHKATKL Trigger: CAGTTTCGTGGCTTTGTGATGAAAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACAATGTGCTGGATGCTGCTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR GCA 90 bp | TGGGTTCCATCCCTAGCATTGTATACACCAGTCATAGTGCATACCTaGCGTTTTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTT | + |
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Preference number: 1 (lower is better) Translates to: WVPSLALYTPVIVHT*RFSTWETEAEGSGL Trigger: AAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAAAACGGCAGGTATGCACTATGACTGGTGTATACAATGCTAGGGATGGAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR TCA 90 bp | ATAAGAGTGCTTGGAGCTCAGTTGACAGAGTGCTTGGAGCTCAGTTaGCAGAGTACTTGGAGCTCAGGTGTAGAACATTTACTTAGTATG | + |
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Preference number: 1 (lower is better) Translates to: IRVLGAQLTECLELS*QSTWSSGVEHLLSM Trigger: CATACTAAGTAAATGTTCTACACCTGAGCTCCAAGTACTCTGTCAACTGAGCTCCAAGCACTCTGTCAACTGAGCTCCAAGCACTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGCCCCACCCTCTCTGGTaGATGCTGGGTTCTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SEFEASLVWGLEVLELGGPHPLW*MLGSGS Trigger: GGACCCAGAACCCAGCATCCACCAGAGAGGGTGGGG...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATCCTACCGCAGGGGTGTaGGGCTCTGCAGTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHPTAGV*GSAVSP Trigger: TGGGGACACTGCAGAGCCCCACACCCCTGCGGTAGG...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGAGTGGAAGTCACCCTTaGGGGATCCCAGGAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: SEFEASLVWGLEVLELGGSGSHP*GIPGDG Trigger: GCCATCTCCTGGGATCCCCCAAGGGTGACTTCCACT...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGGTTGCCCCTTGTGGATaGAGACTTCAGGACCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: SEFEASLVWGLEVLELGGVAPCG*RLQDPL Trigger: AAGGGGGTCCTGAAGTCTGCATCCACAAGGGGCAAC...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR CAA 90 bp | CGAAACTGCCACACACGACGGCGTATGCCTGTCACCTTCAGGTGGTaGAGAAAGGATGATTGCTGTGGCCTGAAACCCAGCCTAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RNCHTRRRMPVTFRW*RKDDCCGLKPSLGS Trigger: AGAGCCTAGGCTGGGTTTCAGGCCACAGCAATCATCCTTTCTCAACCACCTGAAGGTGACAGGCATACGCCGTCGTGTGTGGCAGTTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGACCCCAGAACCTGTaGACCCATCCCTGCCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: TISQVCSCVCVCVCVCVCGPQNL*THPCPD Trigger: GTCAGGGCAGGGATGGGTGCACAGGTTCTGGGGTCC...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGGAGGCCAGCCTAGTTTaGGGGTTGGAGGTGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKEASLV*GLEVLE Trigger: TTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTC...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR TCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGTTAATGGCTGGGAAGTaGCCTAGAGGCTCAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKLMAGK*PRGSAR Trigger: TCTGGCTGAGCCTCTAGGTCACTTCCCAGCCATTAA...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR TCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGGCCAGGGCCGCACAGTaGGGCCCTGTCTCAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQARAAQ*GPVSKQ Trigger: TTGTTTTGAGACAGGGCCTCACTGTGCGGCCCTGGC...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGAGATTCTACCCACACTaGATGGGCTCTGTGAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKRFYPH*MGSVRD Trigger: GTCCCTCACAGAGCCCATGCAGTGTGGGTAGAATCT...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGCACCCATCCCTaGCCTGACCCACCCAATCCT | + |
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Preference number: 2 (lower is better) Translates to: TISQVCSCVCVCVCVCVCLCTHP*PDPPNP Trigger: AGGATTGGGTGGGTCAGGGCAGGGATGGGTGCACAG...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR CAA 90 bp | TTCTACCCACACTGCATGGGCTCTGTGAGGGACCCTGTCCCTGGCTaGGGAAGTCTTTTCTGGAGTGTAGATGGGAAGAGGGAATCCAAA | + |
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Preference number: 2 (lower is better) Translates to: FYPHCMGSVRDPVPG*GSLFWSVDGKRESK Trigger: TTTGGATTCCCTCTTCCCATCTACACTCCAGAAAAGACTTCCCAAGCCAGGGACAGGGTCCCTCACAGAGCCCATGCAGTGTGGGTAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTCACCCATCCCTGCCCTaGCCCACCCAATCCTACAGT | + |
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Preference number: 2 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCHPSLP*PTQSYS Trigger: ACTGTAGGATTGGGTGGGTCAGGGCAGGGATGGGTG...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGCTGATCTCACTTCTGTaGACACGGGTGTGGGAGATT | + |
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Preference number: 2 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKLISLL*TRVWEI Trigger: AATCTCCCACACCCGTGTGCACAGAAGTGAGATCAG...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGGTCTCAGCACAGGGATaGTGGCACCAGGGTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQVSAQG*WHQGSH Trigger: GTGTGAACCCTGGTGCCAGCATCCCTGTGCTGAGAC...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGTGTCCCCACCCTCTCTaGTGGATGCTGGGTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVCPHPL*WMLGSG Trigger: CCCAGAACCCAGCATCCACCAGAGAGGGTGGGGACA...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACATTGTACTCCACTGATCTCACTTCTGTGCACACGGGTGTGGGAGATTTTTCAGCCAGACCAGCATaGCCTCTCAGGCTCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: STLYSTDLTSVHTGVGDFSARPA*PLRLSH Trigger: GTGGCTGAGCCTGAGAGGCCATGCTGGTCTGGCTGA...AAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACAATGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGAAGAGCTGGGCATaGACCCCAGAACCTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: TISQVCSCVCVCVCVCVCRKSWA*TPEPVH Trigger: GTGCACAGGTTCTGGGGTCCATGCCCAGCTCTTCCT...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGCCATCATGTTTGCTCTaGTGGTCCTCCACTCAGATA | + |
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Preference number: 2 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKPSCLL*WSSTQI Trigger: TATCTGAGTGGAGGACCAGCAGAGCAAACATGATGG...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGTCATGTTTGCTCTGCTaGTCCTCCACTCAGATACAG | + |
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Preference number: 2 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKSCLLC*SSTQIQ Trigger: CTGTATCTGAGTGGAGGACCAGCAGAGCAAACATGA...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTAATCCCAGCTCTTaGGAGGCAGCGGCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: TISQVCSCVCVCVCVCVCFNPSS*EAAAGR Trigger: TCTGCCTGCCGCTGCCTCCCAAGAGCTGGGATTAAA...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR CAA 90 bp | AGCTTTGTCCCCAGTCACAGGGACCTTTACGGATCAGGGTCCAGTTaGCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SFVPSHRDLYGSGSS*LFSTISQVCSCVCV Trigger: CACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGCAAACTGGACCCTGATCCGTAAAGGTCCCTGTGACTGGGGACAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATTGCTTGGAGCTCAGTTaGCAGAGTACTTGGAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHCLELS*QSTWSS Trigger: TGAGCTCCAAGTACTCTGTCAACTGAGCTCCAAGCA...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTAGCCTGAATCTCTGGTaGGAAAGCCACTCCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCSLNLW*ESHSPA Trigger: TGCTGGGGAGTGGCTTTCGCACCAGAGATTCAGGCT...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGAGGCAGATTTCTGAGTaGGAGGCTAGCCTGGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQRQISE*EASLVY Trigger: GTAGACCAGGCTAGCCTCGCACTCAGAAATCTGCCT...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGACACTTAGGAAGAGCTaGGCATGGACCCCAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQTLRKS*AWTPEP Trigger: AGGTTCTGGGGTCCATGCCCAGCTCTTCCTAAGTGT...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTATGTGGAAACAGAAGTaGGGTGGGGCAGGGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCMWKQK*GGAGME Trigger: TTCCATCCCTGCCCCACCCCACTTCTGTTTCCACAT...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCTCAGCACAGGGATGCTaGCACCAGGGTTCACACCCT | + |
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Preference number: 2 (lower is better) Translates to: LVLGKLRQKDQDFKVILSSAQGC*HQGSHP Trigger: AGGGTGTGAACCCTGGTGCCAGCATCCCTGTGCTGA...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCCTTGTGCAGTGTGTGTaGGGGGAGAGGGTTGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: LVLGKLRQKDQDFKVILSLVQCV*GERVVR Trigger: ACGCACAACCCTCTCCCCCCACACACACTGCACAAG...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGACAGAAGGAAATTCTTaGTCTAGCTCCTCTATCGTA | + |
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Preference number: 2 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKTEGNS*SSSSIV Trigger: TACGATAGAGGAGCTAGAGCAAGAATTTCCTTCTGT...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR TCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGCAGAGGCAGGAGGATTaGGACTTCAAGGACATCTTT | + |
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Preference number: 2 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVQRQED*DFKDIF Trigger: AAAGATGTCCTTGAAGTCTCAATCCTCCTGCCTCTG...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR TCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCAGGCTAGCTGGCTCATaGGCTTCCTATAGTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LVLGKLRQKDQDFKVILSRLAGS*ASYSLS Trigger: GCTGAGACTATAGGAAGCTCATGAGCCAGCTAGCCT...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATTTTCATTACCTCCTGTaGGCAATGCAGCTCAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHFHYLL*AMQLSK Trigger: TTTACTGAGCTGCATTGCTCACAGGAGGTAATGAAA...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGACCCAGCCTAGGCTCTaGAGATCTTACGTCAATAAA | + |
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Preference number: 2 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQTQPRL*RSYVNK Trigger: TTTATTGACGTAAGATCTCCAGAGCCTAGGCTGGGT...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGCCTGTCACCTTCAGGTaGTTGAGAAAGGATGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVPVTFR*LRKDDC Trigger: GCAATCATCCTTTCTCAACCACCTGAAGGTGACAGG...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGGGTTGTGCGTGTGTTaGAGAATCACCCACATTGTA | + |
|
Preference number: 2 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCGLCVC*RITHIV Trigger: TACAATGTGGGTGATTCTCCAACACACGCACAACCC...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR TCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCGTGGTTGAGAAAGGATaGTTGCTGTGGCCTGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: LVLGKLRQKDQDFKVILSVVEKG*LLWPET Trigger: GGTTTCAGGCCACAGCAATCATCCTTTCTCAACCAC...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCAGAAAACCAGAGGAGTaGAAGTCACCCTTGGGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LVLGKLRQKDQDFKVILSRKPEE*KSPLGD Trigger: ATCCCCCAAGGGTGACTTCCACTCCTCTGGTTTTCT...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGTTCACTTTTAAAACATaGGTCCCAGGGCTTAAACGG | + |
|
Preference number: 2 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQFTFKT*VPGLKR Trigger: CCGTTTAAGCCCTGGGACCCATGTTTTAAAAGTGAA...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATTACTTATTTATTTTGTaGTTGTGCAGTGTGTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHYLFIL*LCSVCG Trigger: CCCACACACACTGCACAAGCACAAAATAAATAAGTA...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCAACATGGCACCATCTTaGTTCAGGCAGAAGGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LVLGKLRQKDQDFKVILSNMAPS*FRQKVV Trigger: GACAACCTTCTGCCTGAACCAAGATGGTGCCATGTT...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCTCTCTTACAATCAAGTaGAAATGGGAGACTAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LVLGKLRQKDQDFKVILSSLTIK*KWETKD Trigger: GTCCTTAGTCTCCCATTTCCACTTGATTGTAAGAGA...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CAA 90 bp | GCAGGTAAGGATTTTAGGTCTCTTCCCTTAAACATAAAGCAAAATTaGGAGCACAAATCAAGACCAGGGTTTGCGAATCGAACTAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: AGKDFRSLPLNIKQN*EHKSRPGFANRTKL Trigger: CAACTTAGTTCGATTCGCAAACCCTGGTCTTGATTTGTGCTCCAAATTTTGCTTTATGTTTAAGGGAAGAGACCTAAAATCCTTACCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | GCAGTGTCCCCACCCTCTCTGGTGGATGCTGGGTTCTaGGTCCCCAAGGAAACACTCTGGAGAAGGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AVSPPSLVDAGF*VPKETLWRRCG Trigger: CCCACACCTTCTCCAGAGTGTTTCCTTGGGGACCCAGAACCCAGCATCCACCAGAGAGGGTGGGGACACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | GGGCTCTGCAGTGTCCCCACCCTCTCTGGTGGATGCTaGGTTCTGGGTCCCCAAGGAAACACTCTGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLCSVPTLSGGC*VLGPQGNTLEK Trigger: CTTCTCCAGAGTGTTTCCTTGGGGACCCAGAACCCAGCATCCACCAGAGAGGGTGGGGACACTGCAGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR GCA 72 bp | CACTTAGGAAGAGCTGGGCATGGACCCCAGAACCTGTaGACCCATCCCTGCCCTGACCCACCCAATCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: HLGRAGHGPQNL*THPCPDPPNPT Trigger: TGTAGGATTGGGTGGGTCAGGGCAGGGATGGGTGCACAGGTTCTGGGGTCCATGCCCAGCTCTTCCTAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR TCA 72 bp | ATGCAGACTTCAGGACCCCCTTTAATGGCTGGGAAGTaGCCTAGAGGCTCAGCCAGACCAGCATGGCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: MQTSGPPLMAGK*PRGSARPAWPL Trigger: GAGAGGCCATGCTGGTCTGGCTGAGCCTCTAGGTCACTTCCCAGCCATTAAAGGGGGTCCTGAAGTCTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | GTGGATGCTGGGTTCTGGGTCCCCAAGGAAACACTCTaGAGAAGGTGTGGGGGCTTGTGCTTGATTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VDAGFWVPKETL*RRCGGLCLISL Trigger: CAGGCTAATCAAGCACAAGCCCCCACACCTTCTCCAGAGTGTTTCCTTGGGGACCCAGAACCCAGCATCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | CCCACACTGCATGGGCTCTGTGAGGGACCCTGTCCCTaGCTTGGGAAGTCTTTTCTGGAGTGTAGATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PTLHGLCEGPCP*LGKSFLECRWE Trigger: TTCCCATCTACACTCCAGAAAAGACTTCCCAAGCCAGGGACAGGGTCCCTCACAGAGCCCATGCAGTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR TCA 72 bp | GCGTATGCCTGTCACCTTCAGGTGGTTGAGAAAGGATaGTTGCTGTGGCCTGAAACCCAGCCTAGGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AYACHLQVVEKG*LLWPETQPRLW Trigger: CCAGAGCCTAGGCTGGGTTTCAGGCCACAGCAATCATCCTTTCTCAACCACCTGAAGGTGACAGGCATACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR GCA 72 bp | GCTGGGCATGGACCCCAGAACCTGTGCACCCATCCCTaGCCTGACCCACCCAATCCTACAGTTTTTGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: AGHGPQNLCTHP*PDPPNPTVFEI Trigger: AATTTCAAAAACTGTAGGATTGGGTGGGTCAGGGCAGGGATGGGTGCACAGGTTCTGGGGTCCATGCCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | TGCCACACACGACGGCGTATGCCTGTCACCTTCAGGTaGTTGAGAAAGGATGATTGCTGTGGCCTGAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: CHTRRRMPVTFR*LRKDDCCGLKP Trigger: GGGTTTCAGGCCACAGCAATCATCCTTTCTCAACCACCTGAAGGTGACAGGCATACGCCGTCGTGTGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGACATACTGTTGCCCCTaGTGGATGCAGACTTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SEFEASLVWGLEVLELGGTYCCP*WMQTSG Trigger: TCCTGAAGTCTGCATCCACAAGGGGCAACAGTATGT...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGAGGCCAGCCTAGTTaGGGGGTTGGAGGTGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TISQVCSCVCVCVCVCVCRGQPS*GVGGVG Trigger: TCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCG...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR GCA 72 bp | CTTGGGGGATCCCAGGAGATGGCAGGCCATCATGTTTaGTCTGCTGGTCCTCCACTCAGATACAGTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGGSQEMAGHHV*SAGPPLRYSDF Trigger: AAAGTCACTGTATCTGAGTGGAGGACCAGCAGAGCAAACATGATGGCCTGCCATCTCCTGGGATCCCCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR GCA 72 bp | GGGTGTGGGAGATTTTTCATCACAAAGCCACGAAACTaGCACACACGACGGCGTATGCCTGTCACCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCGRFFITKPRN*HTRRRMPVTFR Trigger: CCTGAAGGTGACAGGCATACGCCGTCGTGTGTGGCAGTTTCGTGGCTTTGTGATGAAAAATCTCCCACACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | TGGTTCAGGCAGAAGGTTGTCTGTCTCCCTGAGAGATaGAGGGGGAGGATACAGCAGCATCCAGCACATTGT | + |
|
Preference number: 3 (lower is better) Translates to: WFRQKVVCLPER*RGRIQQHPAHC Trigger: ACAATGTGCTGGATGCTGCTGTATCCTCCCCCTCCATCTCTCAGGGAGACAGACAACCTTCTGCCTGAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | GCTCATGAGCTTCCTATAGTCTCAGCACAGGGATGCTaGCACCAGGGTTCACACCCTACCTGGCTTTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: AHELPIVSAQGC*HQGSHPTWLFT Trigger: AGTGAAAAGCCAGGTAGGGTGTGAACCCTGGTGCCAGCATCCCTGTGCTGAGACTATAGGAAGCTCATGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGGCAGAGGCAGGAGGATaGAGACTTCAAGGACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKAEAGG*RLQGHL Trigger: AAGATGTCCTTGAAGTCTCAATCCTCCTGCCTCTGC...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGAGGGTTGTGCGTGTGTaGGAGAATCACCCACATTGT | + |
|
Preference number: 3 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKRVVRV*ENHPHC Trigger: ACAATGTGGGTGATTCTCCAACACACGCACAACCCT...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGGGCAGGCCATCATGTTaGCTCTGCTGGTCCTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVGRPSC*LCWSST Trigger: AGTGGAGGACCAGCAGAGCAAACATGATGGCCTGCC...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGACCCTGTCCCTGGCTaGGGAAGTCTTTTCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCDPVPG*GSLFWS Trigger: ACTCCAGAAAAGACTTCCCAAGCCAGGGACAGGGTC...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTGGAGCTCAGTaGACAGAGTGCTTGGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCVLGAQ*TECLEL Trigger: GAGCTCCAAGCACTCTGTCAACTGAGCTCCAAGCAC...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR GCA 72 bp | GTGGCTTTAACACAAATTCATAGATTCTACCCACACTaGATGGGCTCTGTGAGGGACCCTGTCCCTGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VALTQIHRFYPH*MGSVRDPVPGL Trigger: CAAGCCAGGGACAGGGTCCCTCACAGAGCCCATGCAGTGTGGGTAGAATCTATGAATTTGTGTTAAAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR GCA 72 bp | CCAGTCACAGGGACCTTTACGGATCAGGGTCCAGTTTaGTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PVTGTFTDQGPV*FSQPFPKSARV Trigger: CACACGAGCAGACTTGGGAAATGGTTGAGAAAAGCAAACTGGACCCTGATCCGTAAAGGTCCCTGTGACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | TTCAGGATGGTCCACTGTTTCCTAAGCCTGAATCTCTaGTGCGAAAGCCACTCCCCAGCACACACAGACATA | + |
|
Preference number: 3 (lower is better) Translates to: FRMVHCFLSLNL*CESHSPAHTDI Trigger: TATGTCTGTGTGTGCTGGGGAGTGGCTTTCGCACCAGAGATTCAGGCTTAGGAAACAGTGGACCATCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGAGCCTAGTTTGGGGGTaGGAGGTGTTGGAATTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVSLVWG*EVLELG Trigger: TCCCAATTCCAACACCTCCAACCCCCAAACTAGGCT...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR TCA 72 bp | AAATTCATAGATTCTACCCACACTGCATGGGCTCTGTaGGGGACCCTGTCCCTGGCTTGGGAAGTCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KFIDSTHTAWAL*GTLSLAWEVFS Trigger: AGAAAAGACTTCCCAAGCCAGGGACAGGGTCCCTCACAGAGCCCATGCAGTGTGGGTAGAATCTATGAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR GCA 72 bp | GGGTCCAGTTTGCTTTTCTCAACCATTTCCCAAGTCTaGTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSSLLFSTISQV*SCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGCAAACTGGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CCA 72 bp | TGTACTCCACTGATCTCACTTCTGTGCACACGGGTGTaGGAGATTTTTCATCACAAAGCCACGAAACTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CTPLISLLCTRV*EIFHHKATKLP Trigger: TGGCAGTTTCGTGGCTTTGTGATGAAAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCACATTGTACTCCACTGATCTCACTTCTGTGCACACGGGTGTGGGAGATTTTGTCACCTTCAGGTGGTaGAGAAAGGATGATTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: STLYSTDLTSVHTGVGDFVTFRW*RKDDCC Trigger: ACAGCAATCATCCTTTCTCAACCACCTGAAGGTGAC...AAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACAATGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCGGTTCAGGCAGAAGGTaGTCTGTCTCCCTGAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LVLGKLRQKDQDFKVILSGSGRR*SVSLRD Trigger: ATCTCTCAGGGAGACAGACAACCTTCTGCCTGAACC...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTCAGTTGACAGAGTACTaGGAGCTCAGGTGTAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCQLTEY*ELRCRT Trigger: TGTTCTACACCTGAGCTCCAAGTACTCTGTCAACTG...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR TCA 72 bp | CTTGGAGCTCAGTTGACAGAGTGCTTGGAGCTCAGTTaGCAGAGTACTTGGAGCTCAGGTGTAGAACATTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGAQLTECLELS*QSTWSSGVEHL Trigger: TAAATGTTCTACACCTGAGCTCCAAGTACTCTGTCAACTGAGCTCCAAGCACTCTGTCAACTGAGCTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR TCA 72 bp | TATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTaGGCAATGCAGCTCAGTAAACACTTAGGAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: YSVTAPGFHYLL*AMQLSKHLGRA Trigger: AGCTCTTCCTAAGTGTTTACTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR GCA 72 bp | TCCCTAGCATTGTATACACCAGTCATAGTGCATACCTaGCGTTTTAGTACTTGGGAAACTGAGGCAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SLALYTPVIVHT*RFSTWETEAEG Trigger: TCCTTCTGCCTCAGTTTCCCAAGTACTAAAACGGCAGGTATGCACTATGACTGGTGTATACAATGCTAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCGAGGCAGGAGATTTATaGAGGTCTGCTAAAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LVLGKLRQKDQDFKVILSEAGDL*RSAKKT Trigger: TGTCTTTTTAGCAGACCTCAATAAATCTCCTGCCTC...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGCAGCAGCAGGAGGCCTaGGGCCCACACAGATCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEFEASLVWGLEVLELGGQQQEA*GPHRSG Trigger: GCCGGATCTGTGTGGGCCTCAGGCCTCCTGCTGCTG...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGTCGTGCCAGGCCAGGTaGAACTGCCCCACCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKSCQAR*NCPTEA Trigger: GGCCTCGGTGGGGCAGTTGCACCTGGCCTGGCACGA...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGCACCGAGGCCAGCGCTaGACCCTGCCGCTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKHRGQR*TLPLTL Trigger: CAATGTCAGCGGCAGGGTGCAGCGCTGGCCTCGGTG...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGGTCCCTGCCAGCCCTTaGCCACACGCACCACGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEFEASLVWGLEVLELGGVPASP*PHAPRC Trigger: ACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGAC...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGGGCCCCTCCTCATCGTaGGGGTGGGTGCTACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKGPSSS*GWVLPV Trigger: CACAGGTAGCACCCACCCCCACGATGAGGAGGGGCC...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGCAACCAGGACGCGACTaGGTGATCGGGTACCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SEFEASLVWGLEVLELGGQPGRD*VIGYRT Trigger: GGTTCGGTACCCGATCACTCAGTCGCGTCCTGGTTG...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGGTTGAGAGGCTCCAGTaGCTCCTGGGCCACCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEFEASLVWGLEVLELGGVERLQ*LLGHHL Trigger: CAGATGGTGGCCCAGGAGTCACTGGAGCCTCTCAAC...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGCTGGGCACTGGGCTCTaGTACCTCAGGCAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKLGTGL*YLRQLV Trigger: GACCAGCTGCCTGAGGTAGCAGAGCCCAGTGCCCAG...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGCACAGTGCGCACACCTaGGGCGGGGCCCCCGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVHSAHT*GGAPAT Trigger: CGTTGCGGGGGCCCCGCCCCAGGTGTGCGCACTGTG...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCGCGGAGTCTGGATaGGGTAGCGCACGCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCGAESG*GSARCR Trigger: ACGGCAGCGTGCGCTACCCCATCCAGACTCCGCGCC...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGGAAAGCCGGTGCGGTTaGCGAAGCGGTACACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKESRCG*RSGTQC Trigger: GCACTGTGTACCGCTTCGCCAACCGCACCGGCTTTC...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCCAGGGTGGGAGGCTaGGCACTGGGCTCTGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCPRVGG*ALGSAT Trigger: GGTAGCAGAGCCCAGTGCCCAGCCTCCCACCCTGGG...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGCCCTTAGGCTCTGGGTaGCCTTCGGAGCTTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEFEASLVWGLEVLELGGPLGSG*PSELVE Trigger: CTCTACAAGCTCCGAAGGCCACCCAGAGCCTAAGGG...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGGGGACCACCAGGGATaGCCAGGGGTGCGAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCGDHQG*PGVRRQ Trigger: CTGCCTTCGCACCCCTGGTCATCCCTGGTGGTCCCC...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGTTGATGCACATGATCTaGGGCCGGTCCCACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEFEASLVWGLEVLELGGLMHMI*GRSHFP Trigger: TGGGAAGTGGGACCGGCCTCAGATCATGTGCATCAA...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | AGCACATTGTACTCCACTGATCTCACTTCTGTGCACACGGGTGTGGGAGATTTTCAGGCCAGGTGCAACTaGCCCACCGAGGCCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: STLYSTDLTSVHTGVGDFQARCN*PTEASA Trigger: AGCGCTGGCCTCGGTGGGGCAGTTGCACCTGGCCTG...AAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACAATGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATGCGCAGGAAAGCCGGTaGGGTTGGCGAAGCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHAQESR*GWRSGT Trigger: TGTACCGCTTCGCCAACCGCACCGGCTTTCCTGCGC...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGAGAGGCATTCTCCACTaGTGGAGGGGGACCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKRGILH*WRGTTQ Trigger: CTGTGTGGTCCCCCTCCAGCAGTGGAGAATGCCTCT...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGCTACTCCCATGTCGCTaGGACTGGAGACACCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKLLPCR*DWRHPW Trigger: CCATGGGTGTCTCCAGTCCCAGCGACATGGGAGTAG...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CAA 72 bp | CACTGCATGGGCTCTGTGAGGGACCCTGTCCCTGGCTaGGGAAGTCTTTTCTGGAGTGTAGATGGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HCMGSVRDPVPG*GSLFWSVDGKR Trigger: CCTCTTCCCATCTACACTCCAGAAAAGACTTCCCAAGCCAGGGACAGGGTCCCTCACAGAGCCCATGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | AGCACATTGTACTCCACTGATCTCACTTCTGTGCACACGGGTGTGGGAGATTTTTGGTCCAGGCCCTCGTaGCAGGCCAGGTGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: STLYSTDLTSVHTGVGDFWSRPS*QARCNC Trigger: GCAGTTGCACCTGGCCTGGCACGAGGGCCTGGACCA...AAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACAATGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATAAGTGGCATCAGCAGTaGTGGGGACCACCTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHKWHQQ*WGPPPW Trigger: CCAGGGAGGTGGTCCCCAGCACTGCTGATGCCACTT...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATTCTGTGGGATCTTCCTaGCCGCTGGCCACCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHSVGSS*PLATSS Trigger: GGAAGAGGTGGCCAGCGGGCAGGAAGATCCCACAGA...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGATGGCCCAAGGACTGTaGCTCTGGTCACTCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SEFEASLVWGLEVLELGGMAQGL*LWSLSE Trigger: TTCAGAGAGTGACCAGAGCCACAGTCCTTGGGCCAT...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGCTGACTTCACACTaGGTGCCTCGGCTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCWLTSH*VPRLPL Trigger: CAGGGGCAGCCGAGGCACCCAGTGTGAAGTCAGCCA...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTGGGCCACCATCTaGCCCTTAGGCTCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCSWATI*PLGSGW Trigger: CCACCCAGAGCCTAAGGGCCAGATGGTGGCCCAGGA...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| 3UTR CAA 72 bp | CACACACGACGGCGTATGCCTGTCACCTTCAGGTGGTaGAGAAAGGATGATTGCTGTGGCCTGAAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTRRRMPVTFRW*RKDDCCGLKPS Trigger: GCTGGGTTTCAGGCCACAGCAATCATCCTTTCTCAACCACCTGAAGGTGACAGGCATACGCCGTCGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR TCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGCCCCTCTGCTaGCACAATCTCCCCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCWRPLC*HNLPLI Trigger: GATGAGGGGGAGATTGTGTCAGCAGAGGGGCCTCCA...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGGGAGACTCCTGCTaGCAAGAGAGCCTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCLGDSC*QESLLL Trigger: CAGGAGCAGGCTCTCTTGGCAGCAGGAGTCTCCCAG...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | AGCACATTGTACTCCACTGATCTCACTTCTGTGCACACGGGTGTGGGAGATTTTCCTCGTCGATGCAGGTaGCCCCATTCTCGCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLYSTDLTSVHTGVGDFPRRCR*PHSRKG Trigger: GCCCTTGCGAGAATGGGGGCACCTGCATCGACGAGG...AAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACAATGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTCCTTCTCACACAGGCTaGCCCCATAGCTGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCPSHTG*PHSWGG Trigger: GCCTCCCCAGCTATGGGGGCAGCCTGTGTGAGAAGG...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | AGCACATTGTACTCCACTGATCTCACTTCTGTGCACACGGGTGTGGGAGATTTTCCTGCAATCTCTCTCTaGATCCTCCCAGGCCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: STLYSTDLTSVHTGVGDFPAISL*ILPGPA Trigger: CGCCGGGCCTGGGAGGATGCAGAGAGAGATTGCAGG...AAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACAATGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGTTTGGCCACCAAGATTaGCAAATCCTGTCGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKFGHQD*QILSLA Trigger: GGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAA...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTCATCGTGGGGGTaGGTGCTACCTGTGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCSSSWG*VLPVCP Trigger: TGGGCACACAGGTAGCACCCACCCCCACGATGAGGA...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGAAGTGGAGAAGCTaGGGACAGTGGGACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCGKWRS*GQWDWG Trigger: ACCCCAGTCCCACTGTCCCCAGCTTCTCCACTTCCC...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGGGCATTCTCCACTGCTaGAGGGGGACCACACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQGILHC*RGTTQH Trigger: GTGCTGTGTGGTCCCCCTCCAGCAGTGGAGAATGCC...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR TCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGGCGAAGGCAGAGTGTTaGGAGGCTCCAGTGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQAKAEC*EAPVTP Trigger: AGGAGTCACTGGAGCCTCTCAACACTCTGCCTTCGC...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATGGAGGCAGAGGCAGATaGAACCATTCACCTCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHGGRGR*NHSPRR Trigger: TCGACGAGGTGAATGGTTTCATCTGCCTCTGCCTCC...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATTGGGTGCTACCTGTGTaGCCAAGGGTGTTGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHWVLPV*PRVLSL Trigger: AAGCGACAACACCCTTGGGCACACAGGTAGCACCCA...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGTGGTCTTCTGGGCCCTaGTGCTGGAAGTGTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQWSSGP*CWKCRP Trigger: TGGTCGACACTTCCAGCAGCAGGGCCCAGAAGACCA...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGACAATCCTCCCCACCTaGGAAGAAATTATCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKTILPT*EEIIRL Trigger: CAGCCGGATAATTTCTTCGCAGGTGGGGAGGATTGT...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATCCTTTTCCGTGGCGGTaGTGTCCTGTGTGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHPFPWR*CPVCPD Trigger: ATCAGGACACACAGGACACCACCGCCACGGAAAAGG...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGTTCCCCCAAGCTaGGCTTTAGTTCTCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCPVPPS*ALVLGL Trigger: CAGGCCGAGAACTAAAGCCCAGCTTGGGGGAACAGG...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAGCCTGTTCTTCTaGGACCCAGGAGGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCDSLFF*DPGGKW Trigger: CCACTTCCCTCCTGGGTCCCAGAAGAACAGGCTGTC...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGGCTTCAACTaGGGCAGCTATGGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCVAGFN*GSYGGL Trigger: CAGACCACCATAGCTGCCCCAGTTGAAGCCAGCCAC...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGGCATCAGGGGATCTGTaGCTGGCTTCAACTGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQASGDL*LASTGA Trigger: TGCCCCAGTTGAAGCCAGCCACAGATCCCCTGATGC...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATGTCCAAAGAAGCCCATaGGCCAGAGATGGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHVQRSP*ARDGVL Trigger: AAGCACCCCATCTCTGGCCCATGGGCTTCTTTGGAC...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGGGGCTTCCATGGGTGTaGACTGGGAGCCAGGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVGLPWV*TGSQGL Trigger: TAGACCCTGGCTCCCAGTCCACACCCATGGAAGCCC...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGCTCACGGCAACCCCATaGGCTTCCATGGGTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVLTATP*ASMGVD Trigger: GTCCACACCCATGGAAGCCCATGGGGTTGCCGTGAG...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGGCTCCAGTGACTCCTaGGCCACCATCTGGCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCGSSDS*ATIWPL Trigger: TAAGGGCCAGATGGTGGCCCAGGAGTCACTGGAGCC...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGGAAGCCCTTCACGCTTaGACTCTCAGCCACAACATT | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKEALHA*TLSHNI Trigger: AATGTTGTGGCTGAGAGTCCAAGCGTGAAGGGCTTC...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGATCTTCCTGCCCGCTaGCCACCTCTTCCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCDLPAR*PPLPRS Trigger: GCTTCTGGGAAGAGGTGGCCAGCGGGCAGGAAGATC...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGCATACACGGTGCCGTTaGTGTGGCAGGTGCCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVHTRCR*CGRCPH Trigger: ATGGGGGCACCTGCCACACCAACGGCACCGTGTATG...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR TCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGTGTGTCCTaGTCCCCAGCCACTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCVSCVS*SPATRR Trigger: TCTCCTAGTGGCTGGGGATCAGGACACACAGGACAC...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR TCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATCTTCTCCACTGGACATaGGAGGTTCCTGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHLLHWT*EVPGSQ Trigger: CTGACTTCCAGGAACCTCTCATGTCCAGTGGAGAAG...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR TCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGCTCTGGTCACTCTCTaGAGCCTCTGTGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCALVTL*SLCGCR Trigger: TCTGCAGCCACAGAGGCTTCAGAGAGTGACCAGAGC...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCAAGGCAGCCTGCAGGTaGCGTGGGGCAGCGATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVLGKLRQKDQDFKVILSKAACR*RGAAMV Trigger: TACCATCGCTGCCCCACGGCACCTGCAGGCTGCCTT...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGATACAGGTATCAGAGTaGTGGGTATGTCCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKIQVSE*WVCPTV Trigger: GACTGTGGGACATACCCAGCACTCTGATACCTGTAT...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCAGGCGACAAGCCTCCTaGGCCTCAGCGAAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLGKLRQKDQDFKVILSRRQAS*ASAKVS Trigger: GCTGACCTTCGCTGAGGCCCAGGAGGCTTGTCGCCT...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTCCATGTCGCTGGGACTaGAGACACCCATGGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCPCRWD*RHPWSL Trigger: CAAGCTCCATGGGTGTCTCCAGTCCCAGCGACATGG...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGCCACATCAGGGACTCTaGGAGACTCCTGCTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVPHQGL*ETPAAK Trigger: CTTGGCAGCAGGAGTCTCCCAGAGTCCCTGATGTGG...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTCAGGGGATCTGTGGCTaGCTTCAACTGGGGCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCQGICG*LQLGQL Trigger: TAGCTGCCCCAGTTGAAGCCAGCCACAGATCCCCTG...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGTCCATGGGTGTGGACTaGGAGCCAGGGTCTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVSMGVD*EPGSSP Trigger: AGGACTAGACCCTGGCTCCCAGTCCACACCCATGGA...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATATTCAGACTCCCAAGTaGCATCAGCAGTGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHIQTPK*HQQCWG Trigger: TCCCCAGCACTGCTGATGCCACTTGGGAGTCTGAAT...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGAATCCTTCATCACACTaGTATCGCACAGTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKNPSSH*YRTVAW Trigger: CCATGCCACTGTGCGATACCAGTGTGATGAAGGATT...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR TCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGCATGGACATTGTACTTaGTCTTGCGCACACCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKHGHCT*SCAHQQ Trigger: TTGTTGGTGTGCGCAAGATCAAGTACAATGTCCATG...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGGAGCTTAGCCGTGGTTaGAGGGTAAAGAAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVELSRG*RVKKQG Trigger: GCCCTGCTTCTTTACCCTGCAACCACGGCTAAGCTC...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATGACATGAGAGGTTCCTaGAAGTCAGGTGCTATCACC | + |
|
Preference number: 4 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHDMRGS*KSGAIT Trigger: GGTGATAGCACCTGACTTCCAGGAACCTCTCATGTC...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCAGGCAGCTGGTCTTCTaGGCCCTGCTGCTGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLGKLRQKDQDFKVILSRQLVF*ALLLEV Trigger: CACTTCCAGCAGCAGGGCCCAGAAGACCAGCTGCCT...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGTGGGGACAGTGGGACTaGGGTCATATTGGGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVWGQWD*GHIGDK Trigger: CTTGTCCCCAATATGACCCCAGTCCCACTGTCCCCA...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTTGTCCCACAGTCCTGTaGGTTCCCCTGAGGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCCPTVL*VPLRKL Trigger: CAGTTTCCTCAGGGGAACCCACAGGACTGTGGGACA...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGCAGGTATCAGAGTGCTaGGTATGTCCCACAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQQVSEC*VCPTVL Trigger: CAGGACTGTGGGACATACCCAGCACTCTGATACCTG...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR CAA 72 bp | CCCAGTCACAGGGACCTTTACGGATCAGGGTCCAGTTaGCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSHRDLYGSGSS*LFSTISQVCSC Trigger: ACACGAGCAGACTTGGGAAATGGTTGAGAAAAGCAAACTGGACCCTGATCCGTAAAGGTCCCTGTGACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTACTCAGTCCCTAGGATaGCAGCATCAGAAGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCTQSLG*QHQKGQ Trigger: CTGTCCCTTCTGATGCTGGCATCCTAGGGACTGAGT...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGATAGTGGCCACTCGGTaGTGGGAGAATCCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQIVATR*WENPSS Trigger: TGATGAAGGATTCTCCCAGCACCGAGTGGCCACTAT...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCCTTTACCACTTaGCAGCGATACAGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TISQVCSCVCVCVCVCVCIPFTT*QRYSPE Trigger: CTCTGGGCTGTATCGCTGCCAAGTGGTAAAGGGTAT...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGGTGTTGTCTGTCCACTaGAAGTCCCTCTCTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQVLSVH*KSLSTV Trigger: GACAGTAGAGAGGGACTTCCAGTGGACAGACAACAC...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | ACACCAGGGAGGGGGAAAGCTGGAGATGAGGCTCCAGTCCAGAAAAGCCTAAAGTATCGCACAGTGGCATaGACATTGTACTTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRGKAGDEAPVQKSLKYRTVA*TLYLIL Trigger: CAAGATCAAGTACAATGTCCATGCCACTGTGCGATA...CTTTAGGCTTTTCTGGACTGGAGCCTCATCTCCAGCTTTCCCCCTCCCTGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGCTCCCAGTCTTCCGCTaGGTGTCTCTTGTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQLPVFR*VSLVFS Trigger: AGAAAACACAAGAGACACCCAGCGGAAGACTGGGAG...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCGCAGAAGCCACAGTTTaGGGGCTCGAAGCATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVLGKLRQKDQDFKVILSAEATV*GLEAWL Trigger: TAGCCATGCTTCGAGCCCCCAAACTGTGGCTTCTGC...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCAGAAGCTGGGGACAGTaGGACTGGGGTCATATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLGKLRQKDQDFKVILSRSWGQ*DWGHIG Trigger: CCCAATATGACCCCAGTCCCACTGTCCCCAGCTTCT...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | CTATTCAGTAACTGCCCCAGGCTTTCATTACCTCCTGTGAGCAATGCAGCTCAGCTCCAGTTCTCATATTaGAGTCCTGTGTTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSNCPRLSLPPVSNAAQLQFSY*SPVLSV Trigger: GACAGACAACACAGGACTGCAATATGAGAACTGGAG...CTGAGCTGCATTGCTCACAGGAGGTAATGAAAGCCTGGGGCAGTTACTGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CCA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTATGGTCACAGCTATGTaGGTGCTAGAAATGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCMVTAM*VLEMAL Trigger: AAGTGCCATTTCTAGCACCCACATAGCTGTGACCAT...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | GAACACTGTAAGCATAAAGTCCATCAGGCAGGATGTGGAAACAGAAGTGGGGTGGATTTCTATAGAATCTaGATCAGGGGATCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EHCKHKVHQAGCGNRSGVDFYRI*IRGSVA Trigger: AGCCACAGATCCCCTGATGCAGATTCTATAGAAATC...CACCCCACTTCTGTTTCCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR GCA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCCATTCTCGCAAGGGCTaGATAAGCAGTCATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLGKLRQKDQDFKVILSHSRKG*ISSHQC Trigger: ACATTGATGACTGCTTATGCAGCCCTTGCGAGAATG...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| 3UTR CAA 72 bp | TTAGTATGCACAAATCTCTGGGTTCCATCCCTAGCATaGTATACACCAGTCATAGTGCATACCTGCCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVCTNLWVPSLA*YTPVIVHTCRF Trigger: AAAACGGCAGGTATGCACTATGACTGGTGTATACAATGCTAGGGATGGAACCCAGAGATTTGTGCATACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | GCCCTCGTGCCAGGCCAGGTGCAACTGCCCCACCGAGGCCAGCGCTaGACCCTGCCGCTGACATTGTGCCCGCGCGCCCGCCAGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALVPGQVQLPHRGQR*TLPLTLCPRARQGQ Trigger: CTGACCCTGGCGGGCGCGCGGGCACAATGTCAGCGGCAGGGTGCAGCGCTGGCCTCGGTGGGGCAGTTGCACCTGGCCTGGCACGAGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | GGAAGCAGTAGGCGTCGAAGCGTGCTCCTGGCGCAGGAAAGCCGGTaGGGTTGGCGAAGCGGTACACAGTGCGCACACCTGGGGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSRRRSVLLAQESR*GWRSGTQCAHLGRG Trigger: GCCCCGCCCCAGGTGTGCGCACTGTGTACCGCTTCGCCAACCGCACCGGCTTTCCTGCGCCAGGAGCACGCTTCGACGCCTACTGCTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CCCAGGGTGGGAGGCTGGGCACTGGGCTCTGCTACCTCAGGCAGCTaGTCTTCTGGGCCCTGCTGCTGGAAGTGTCGACCATTCAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRVGGWALGSATSGS*SSGPCCWKCRPFNP Trigger: AGGGTTGAATGGTCGACACTTCCAGCAGCAGGGCCCAGAAGACCAGCTGCCTGAGGTAGCAGAGCCCAGTGCCCAGCCTCCCACCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | GGTTCCATGCTCACGGCAACCCCATGGGCTTCCATGGGTGTGGACTaGGAGCCAGGGTCTAGTCCTTGGCCAGGCAGTGGTAGCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSMLTATPWASMGVD*EPGSSPWPGSGSQV Trigger: CACCTGGCTACCACTGCCTGGCCAAGGACTAGACCCTGGCTCCCAGTCCACACCCATGGAAGCCCATGGGGTTGCCGTGAGCATGGAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 90 bp | CAGCAGAAGGGTAGCATTGGCTCTGTGCCGGGGATAAGCAGGCAATaGCACCCGTCCCTGCCAGCCCTTGGCCACACGCACCACGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QQKGSIGSVPGISRQ*HPSLPALGHTHHVV Trigger: GACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGACGGGTGTCATTGCCTGCTTATCCCCGGCACAGAGCCAATGCTACCCTTCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | CCATGCAGGCAGGGGTTGTTCTCGCAGGGATCTGTGGGATCTTCCTaGCCGCTGGCCACCTCTTCCCAGAAGCCCTTCACGCTTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: PCRQGLFSQGSVGSS*PLATSSQKPFTLGL Trigger: GAGTCCAAGCGTGAAGGGCTTCTGGGAAGAGGTGGCCAGCGGGCAGGAAGATCCCACAGATCCCTGCGAGAACAACCCCTGCCTGCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | GCTCTTCTGGCGAATGGACGCTTGTCAGGTGACCAGCTCGGCGCCTaGAATCTCTCTCTGCATCCTCCCAGGCCCGGCGATGGGCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALLANGRLSGDQLGA*NLSLHPPRPGDGQS Trigger: ACTTTGCCCATCGCCGGGCCTGGGAGGATGCAGAGAGAGATTGCAGGCGCCGAGCTGGTCACCTGACAAGCGTCCATTCGCCAGAAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 90 bp | CTCTGGTCACTCTCTGAAGCCTCTGTGGCTGCAGAAGGCCTCATGTaGTTGGCAGTAGCTCCCAGGGTGGGAGGCTGGGCACTGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWSLSEASVAAEGLM*LAVAPRVGGWALGS Trigger: AGAGCCCAGTGCCCAGCCTCCCACCCTGGGAGCTACTGCCAACCACATGAGGCCTTCTGCAGCCACAGAGGCTTCAGAGAGTGACCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | GCCAGGTGGCCAGCACCTTCTCCACAGTGGCCTGTCCGCCTGATGTaGGACTCCCTGGTAAGTCCAAGACCCCAGACTCAGTCCCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARWPAPSPQWPVRLM*DSLVSPRPQTQSLG Trigger: TCCTAGGGACTGAGTCTGGGGTCTTGGACTTACCAGGGAGTCCCACATCAGGCGGACAGGCCACTGTGGAGAAGGTGCTGGCCACCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 90 bp | CCCTGGCTTCGCGCTAGGAGTACTGTCGGTGCTTGGGACACTGGGTaGGATCAACGACGGGGACCACATCAGGGACTCTGGGAGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PWLRARSTVGAWDTG*DQRRGPHQGLWETP Trigger: AGGAGTCTCCCAGAGTCCCTGATGTGGTCCCCGTCGTTGATCTCACCCAGTGTCCCAAGCACCGACAGTACTCCTAGCGCGAAGCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 90 bp | TTGTGCTGTATGGTGATGAGCTCGGAAGCAGTAGGCGTCGAAGCGTaGTCCTGGCGCAGGAAAGCCGGTGCGGTTGGCGAAGCGGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: LCCMVMSSEAVGVEA*SWRRKAGAVGEAVH Trigger: GTGTACCGCTTCGCCAACCGCACCGGCTTTCCTGCGCCAGGAGCACGCTTCGACGCCTACTGCTTCCGAGCTCATCACCATACAGCACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | GCACTGGGCTCTGCTACCTCAGGCAGCTGGTCTTCTGGGCCCTGCTaGTGGAAGTGTCGACCATTCAACCCTTTAAAGCGGCCCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALGSATSGSWSSGPC*WKCRPFNPLKRPLL Trigger: GAGGAGGGGCCGCTTTAAAGGGTTGAATGGTCGACACTTCCAGCAGCAGGGCCCAGAAGACCAGCTGCCTGAGGTAGCAGAGCCCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | TGGGCACTGGGCTCTGCTACCTCAGGCAGCTGGTCTTCTGGGCCCTaGTGCTGGAAGTGTCGACCATTCAACCCTTTAAAGCGGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WALGSATSGSWSSGP*CWKCRPFNPLKRPL Trigger: GAGGGGCCGCTTTAAAGGGTTGAATGGTCGACACTTCCAGCAGCAGGGCCCAGAAGACCAGCTGCCTGAGGTAGCAGAGCCCAGTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CCTCCCTCCAAAGCCACTGTAGGTTCCATGCTCACGGCAACCCCATaGGCTTCCATGGGTGTGGACTGGGAGCCAGGGTCTAGTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSKATVGSMLTATP*ASMGVDWEPGSSPW Trigger: CCAAGGACTAGACCCTGGCTCCCAGTCCACACCCATGGAAGCCCATGGGGTTGCCGTGAGCATGGAACCTACAGTGGCTTTGGAGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | ACACCCGTCCCTGCCAGCCCTTGGCCACACGCACCACGTTGTCTTTaGCCACCAAGATTGGCAAATCCTGTCGCTGGCCTGATGCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TPVPASPWPHAPRCL*PPRLANPVAGLMQS Trigger: AGACTGCATCAGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGACGGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CTGGGCTCTGCTACCTCAGGCAGCTGGTCTTCTGGGCCCTGCTGCTaGAAGTGTCGACCATTCAACCCTTTAAAGCGGCCCCTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LGSATSGSWSSGPCC*KCRPFNPLKRPLLI Trigger: GATGAGGAGGGGCCGCTTTAAAGGGTTGAATGGTCGACACTTCCAGCAGCAGGGCCCAGAAGACCAGCTGCCTGAGGTAGCAGAGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | GAAGGCAGAGTGTTGAGAGGCTCCAGTGACTCCTGGGCCACCATCTaGCCCTTAGGCTCTGGGTGGCCTTCGGAGCTTGTAGAGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EGRVLRGSSDSWATI*PLGSGWPSELVEVS Trigger: ACTGACCTCTACAAGCTCCGAAGGCCACCCAGAGCCTAAGGGCCAGATGGTGGCCCAGGAGTCACTGGAGCCTCTCAACACTCTGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | AGTGAGTTCGAGGCCAGCCTAGTTTGGGGGTTGGAGGTGTTGGAATTGGGAGGGGGAAAGCCGGTGCGGTaGGCGAAGCGGTACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SEFEASLVWGLEVLELGGGKPVR*AKRYTV Trigger: CACTGTGTACCGCTTCGCCAACCGCACCGGCTTTCC...CCCTCCCAATTCCAACACCTCCAACCCCCAAACTAGGCTGGCCTCGAACTCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | GGACCACATCAGGGACTCTGGGAGACTCCTGCTGCCAAGAGAGCCTaGTCCTGGCTCATCCACTTCGTTGGTCAGAATGGCCCAAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GPHQGLWETPAAKRA*SWLIHFVGQNGPRT Trigger: AGTCCTTGGGCCATTCTGACCAACGAAGTGGATGAGCCAGGAGCAGGCTCTCTTGGCAGCAGGAGTCTCCCAGAGTCCCTGATGTGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | TGTGCCGGGGATAAGCAGGCAATGACACCCGTCCCTGCCAGCCCTTaGCCACACGCACCACGTTGTCTTTGGCCACCAAGATTGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CAGDKQAMTPVPASP*PHAPRCLWPPRLAN Trigger: ATTTGCCAATCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGACGGGTGTCATTGCCTGCTTATCCCCGGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CTTTACCACTTGGCAGCGATACAGCCCAGAGTCGCTTGCTCGAAGTaGCCCCAGCAGAAGGGTAGCATTGGCTCTGTGCCGGGGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LYHLAAIQPRVACSK*PQQKGSIGSVPGIS Trigger: GCTTATCCCCGGCACAGAGCCAATGCTACCCTTCTGCTGGGGCCACTTCGAGCAAGCGACTCTGGGCTGTATCGCTGCCAAGTGGTAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | GCTCCTGGCTCATCCACTTCGTTGGTCAGAATGGCCCAAGGACTGTaGCTCTGGTCACTCTCTGAAGCCTCTGTGGCTGCAGAAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: APGSSTSLVRMAQGL*LWSLSEASVAAEGL Trigger: GAGGCCTTCTGCAGCCACAGAGGCTTCAGAGAGTGACCAGAGCCACAGTCCTTGGGCCATTCTGACCAACGAAGTGGATGAGCCAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CATCAGGGACTCTGGGAGACTCCTGCTGCCAAGAGAGCCTGCTCCTaGCTCATCCACTTCGTTGGTCAGAATGGCCCAAGGACTGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQGLWETPAAKRACS*LIHFVGQNGPRTVA Trigger: AGCCACAGTCCTTGGGCCATTCTGACCAACGAAGTGGATGAGCCAGGAGCAGGCTCTCTTGGCAGCAGGAGTCTCCCAGAGTCCCTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CCTGACAGCCTGTTCTTCTGGGACCCAGGAGGGAAGTGGAGAAGCTaGGGACAGTGGGACTGGGGTCATATTGGGGACAAGTGTAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PDSLFFWDPGGKWRS*GQWDWGHIGDKCRA Trigger: CGCTCTACACTTGTCCCCAATATGACCCCAGTCCCACTGTCCCCAGCTTCTCCACTTCCCTCCTGGGTCCCAGAAGAACAGGCTGTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | GGATCTGTGGCTGGCTTCAACTGGGGCAGCTATGGTGGTCTGAAATaGGGTTTCGAGGTCTTCCGCTCCAAGGCTGACAGGCCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSVAGFNWGSYGGLK*GFEVFRSKADRPDS Trigger: GCTGTCAGGCCTGTCAGCCTTGGAGCGGAAGACCTCGAAACCCCATTTCAGACCACCATAGCTGCCCCAGTTGAAGCCAGCCACAGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | TTCGATACCCTTTACCACTTGGCAGCGATACAGCCCAGAGTCGCTTaGTCGAAGTGGCCCCAGCAGAAGGGTAGCATTGGCTCTGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: FDTLYHLAAIQPRVA*SKWPQQKGSIGSVP Trigger: CGGCACAGAGCCAATGCTACCCTTCTGCTGGGGCCACTTCGAGCAAGCGACTCTGGGCTGTATCGCTGCCAAGTGGTAAAGGGTATCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | AGATCAACGACGGGGACCACATCAGGGACTCTGGGAGACTCCTGCTaGCAAGAGAGCCTGCTCCTGGCTCATCCACTTCGTTGGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSTTGTTSGTLGDSC*QESLLLAHPLRWSE Trigger: TTCTGACCAACGAAGTGGATGAGCCAGGAGCAGGCTCTCTTGGCAGCAGGAGTCTCCCAGAGTCCCTGATGTGGTCCCCGTCGTTGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | CGGTCCCACTTCCCATTGTTACGGCAGCGGATAGTGGCCACTCGGTaGTGGGAGAATCCTTCATCACACTGGTATCGCACAGTGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RSHFPLLRQRIVATR*WENPSSHWYRTVAW Trigger: CCATGCCACTGTGCGATACCAGTGTGATGAAGGATTCTCCCAGCACCGAGTGGCCACTATCCGCTGCCGTAACAATGGGAAGTGGGACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | GGCTCATCCACTTCGTTGGTCAGAATGGCCCAAGGACTGTGGCTCTaGTCACTCTCTGAAGCCTCTGTGGCTGCAGAAGGCCTCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSTSLVRMAQGLWL*SLSEASVAAEGLMW Trigger: CCACATGAGGCCTTCTGCAGCCACAGAGGCTTCAGAGAGTGACCAGAGCCACAGTCCTTGGGCCATTCTGACCAACGAAGTGGATGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | GACTCCTGCTGCCAAGAGAGCCTGCTCCTGGCTCATCCACTTCGTTaGTCAGAATGGCCCAAGGACTGTGGCTCTGGTCACTCTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSCCQESLLLAHPLR*SEWPKDCGSGHSLK Trigger: CTTCAGAGAGTGACCAGAGCCACAGTCCTTGGGCCATTCTGACCAACGAAGTGGATGAGCCAGGAGCAGGCTCTCTTGGCAGCAGGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 90 bp | CTTGTGATGTCGGTGTGGATGGTGGTGGTGTCTACGCATCCGATGTaGCCGCCTGGGTTTGATGCACATGATCTGAGGCCGGTCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LVMSVWMVVVSTHPM*PPGFDAHDLRPVPL Trigger: AAGTGGGACCGGCCTCAGATCATGTGCATCAAACCCAGGCGGTCACATCGGATGCGTAGACACCACCACCATCCACACCGACATCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | ACCATTCAACCCTTTAAAGCGGCCCCTCCTCATCGTGGGGGTGGGTaGTACCTGTGTGCCCAAGGGTGTTGTCGCTTCCATATCTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TIQPFKAAPPHRGGG*YLCAQGCCRFHIYS Trigger: GGAGTAGATATGGAAGCGACAACACCCTTGGGCACACAGGTAGCACCCACCCCCACGATGAGGAGGGGCCGCTTTAAAGGGTTGAATGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | AGCACATTGTACTCCACTGATCTCACTTCTGTGCACACGGGTGTGGGAGATTTTCGTCCCTGCCAGCCCTaGGCCACACGCACCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STLYSTDLTSVHTGVGDFRPCQP*ATRTTL Trigger: CAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGACG...AAAATCTCCCACACCCGTGTGCACAGAAGTGAGATCAGTGGAGTACAATGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 90 bp | CTTGTGTCCAAGTCAAGTCTGGGGGTTCGCCTTCTCCACTGGACATaGGAGGTTCCTGGAAGTCAGGTGCTATCACCTCCTGTTCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVSKSSLGVRLLHWT*EVPGSQVLSPPVPP Trigger: TGGGGGAACAGGAGGTGATAGCACCTGACTTCCAGGAACCTCTCATGTCCAGTGGAGAAGGCGAACCCCCAGACTTGACTTGGACACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 90 bp | TCCGCTGGGTGTCTCTTGTGTTTTCTGTGCTCCTTGCGAGGCTTGTaGTGTCGGTGTGGATGGTGGTGGTGTCTACGCATCCGATGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SAGCLLCFLCSLRGL*CRCGWWWCLRIRCD Trigger: GTCACATCGGATGCGTAGACACCACCACCATCCACACCGACATCACAAGCCTCGCAAGGAGCACAGAAAACACAAGAGACACCCAGCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CCAAGGATACAGGTATCAGAGTGCTGGGTATGTCCCACAGTCCTGTaGGTTCCCCTGAGGAAACTGAGGCCACTTCATCCATGGGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: PRIQVSECWVCPTVL*VPLRKLRPLHPWGP Trigger: TGGTCCCCATGGATGAAGTGGCCTCAGTTTCCTCAGGGGAACCCACAGGACTGTGGGACATACCCAGCACTCTGATACCTGTATCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | TCCCACTTCCCATTGTTACGGCAGCGGATAGTGGCCACTCGGTGCTaGGAGAATCCTTCATCACACTGGTATCGCACAGTGGCATGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SHFPLLRQRIVATRC*ENPSSHWYRTVAWT Trigger: TGTCCATGCCACTGTGCGATACCAGTGTGATGAAGGATTCTCCCAGCACCGAGTGGCCACTATCCGCTGCCGTAACAATGGGAAGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | AGTAGAACCAAGGGTCTCCTCAGGTGCTTGTGTCCAAGTCAAGTCTaGGGGTTCGCCTTCTCCACTGGACATGAGAGGTTCCTGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRTKGLLRCLCPSQV*GFAFSTGHERFLEV Trigger: GACTTCCAGGAACCTCTCATGTCCAGTGGAGAAGGCGAACCCCCAGACTTGACTTGGACACAAGCACCTGAGGAGACCCTTGGTTCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 90 bp | TTGGCCACCAAGATTGGCAAATCCTGTCGCTGGCCTGATGCAGTCTaGACCTTAGTCCACTTGATCCGAGGAATGTCTCGCAGGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LATKIGKSCRWPDAV*TLVHLIRGMSRREL Trigger: AAGCTCCCTGCGAGACATTCCTCGGATCAAGTGGACTAAGGTTCAGACTGCATCAGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | TCAGGTCTGATTCATCCAAGCCCAAGGATACAGGTATCAGAGTGCTaGGTATGTCCCACAGTCCTGTGGGTTCCCCTGAGGAAACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLIHPSPRIQVSEC*VCPTVLWVPLRKLR Trigger: CCTCAGTTTCCTCAGGGGAACCCACAGGACTGTGGGACATACCCAGCACTCTGATACCTGTATCCTTGGGCTTGGATGAATCAGACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CAGCGGATAGTGGCCACTCGGTGCTGGGAGAATCCTTCATCACACTaGTATCGCACAGTGGCATGGACATTGTACTTGATCTTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QRIVATRCWENPSSH*YRTVAWTLYLILRT Trigger: TGTGCGCAAGATCAAGTACAATGTCCATGCCACTGTGCGATACCAGTGTGATGAAGGATTCTCCCAGCACCGAGTGGCCACTATCCGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATGAGTACTGTCGGTGCTaGGGACACTGGGTGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHEYCRC*GHWVRS Trigger: TGATCTCACCCAGTGTCCCAAGCACCGACAGTACTC...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTCCATGCAGGCAGGGGTaGTTCTCGCAGGGATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCPCRQG*FSQGSV Trigger: CACAGATCCCTGCGAGAACAACCCCTGCCTGCATGG...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCCCATACACGGTGCCGTaGGTGTGGCAGGTGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LVLGKLRQKDQDFKVILSPYTVP*VWQVPP Trigger: TGGGGGCACCTGCCACACCAACGGCACCGTGTATGG...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 90 bp | CACGTTGTCTTTGGCCACCAAGATTGGCAAATCCTGTCGCTGGCCTaGTGCAGTCTGAACCTTAGTCCACTTGATCCGAGGAATGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HVVFGHQDWQILSLA*CSLNLSPLDPRNVS Trigger: CGAGACATTCCTCGGATCAAGTGGACTAAGGTTCAGACTGCATCAGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAAGACAACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 90 bp | CATTCAGGTCTGATTCATCCAAGCCCAAGGATACAGGTATCAGAGTaGTGGGTATGTCCCACAGTCCTGTGGGTTCCCCTGAGGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: HSGLIHPSPRIQVSE*WVCPTVLWVPLRKL Trigger: CAGTTTCCTCAGGGGAACCCACAGGACTGTGGGACATACCCAGCACTCTGATACCTGTATCCTTGGGCTTGGATGAATCAGACCTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | GATTTCTATAGAATCTGCATCAGGGGATCTGTGGCTGGCTTCAACTaGGGCAGCTATGGTGGTCTGAAATGGGGTTTCGAGGTCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DFYRICIRGSVAGFN*GSYGGLKWGFEVFR Trigger: GCGGAAGACCTCGAAACCCCATTTCAGACCACCATAGCTGCCCCAGTTGAAGCCAGCCACAGATCCCCTGATGCAGATTCTATAGAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCACAGCCCAGAGTCGCTaGCTCGAAGTGGCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVLGKLRQKDQDFKVILSTAQSR*LEVAPA Trigger: TGCTGGGGCCACTTCGAGCAAGCGACTCTGGGCTGT...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGACTGGGGTCATATaGGGGACAAGTGTAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TISQVCSCVCVCVCVCVCGTGVI*GTSVER Trigger: ACGCTCTACACTTGTCCCCAATATGACCCCAGTCCC...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 90 bp | CGGTGCTGGGAGAATCCTTCATCACACTGGTATCGCACAGTGGCATaGACATTGTACTTGATCTTGCGCACACCAACAAGAGAGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RCWENPSSHWYRTVA*TLYLILRTPTREAF Trigger: GAATGCCTCTCTTGTTGGTGTGCGCAAGATCAAGTACAATGTCCATGCCACTGTGCGATACCAGTGTGATGAAGGATTCTCCCAGCACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTCTTTGGCCACCAAGATaGGCAAATCCTGTCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCLWPPR*ANPVAG Trigger: GCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAAG...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CAA 90 bp | GCTTTTCTCAACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTCAGCCCGCGTCGCAGTaGTCAAAGCCATCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AFLNHFPSLLVCVCVCVCQPASQ*SKPSSK Trigger: CTTTGAAGATGGCTTTGACAACTGCGACGCGGGCTG...ACACACACACACACACACACACACGAGCAGACTTGGGAAATGGTTGAGAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | ACAAAACCCAGCAGAACCTGTAGCCATTCTCGCACATACACACTCCTCCCGCATGCATGGACATTGTACTaGATCTTGCGCACACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TKPSRTCSHSRTYTLLPHAWTLY*ILRTPT Trigger: TGTTGGTGTGCGCAAGATCAAGTACAATGTCCATGC...ATGCGGGAGGAGTGTGTATGTGCGAGAATGGCTACAGGTTCTGCTGGGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS-3UTR CAA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCAGAATCTCCATGTaGTGCTGTATGGTGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TISQVCSCVCVCVCVCVCLRISM*CCMVMS Trigger: GCTCATCACCATACAGCACAACATGGAGATTCTGAG...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CAA 90 bp | ACCATTTCCCAAGTCTGCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACAGTGGCATGGACATaGTACTTGATCTTGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TISQVCSCVCVCVCVCVCTVAWT*YLILRT Trigger: TGTGCGCAAGATCAAGTACAATGTCCATGCCACTGT...ACACACACACACACACACACACACACACACACACGAGCAGACTTGGGAAATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS-3UTR CAA 90 bp | TTAGTACTTGGGAAACTGAGGCAGAAGGATCAGGACTTTAAGGTTATCCTCAGCGATACCCTTTACCACTaGGCAGCGATACAGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVLGKLRQKDQDFKVILSDTLYH*AAIQPR Trigger: TCTGGGCTGTATCGCTGCCAAGTGGTAAAGGGTATC...GCTGAGGATAACCTTAAAGTCCTGATCCTTCTGCCTCAGTTTCCCAAGTACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | CACCGAGGCCAGCGCTGCACCCTGCCGCTGACATTGTaGCCGCGCGCCCGCCAGGGTCAGTCGGCGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: HRGQRCTLPLTL*PRARQGQSAGR Trigger: CCGGCCCGCCGACTGACCCTGGCGGGCGCGCGGGCACAATGTCAGCGGCAGGGTGCAGCGCTGGCCTCGGTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CAA 72 bp | CCCCACCGAGGCCAGCGCTGCACCCTGCCGCTGACATaGTGCCCGCGCGCCCGCCAGGGTCAGTCGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PHRGQRCTLPLT*CPRARQGQSAG Trigger: GCCCGCCGACTGACCCTGGCGGGCGCGCGGGCACAATGTCAGCGGCAGGGTGCAGCGCTGGCCTCGGTGGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | CCAGGCCAGGTGCAACTGCCCCACCGAGGCCAGCGCTaGACCCTGCCGCTGACATTGTGCCCGCGCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PGQVQLPHRGQR*TLPLTLCPRAR Trigger: GCGGGCGCGCGGGCACAATGTCAGCGGCAGGGTGCAGCGCTGGCCTCGGTGGGGCAGTTGCACCTGGCCTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | GGTGCGGTTGGCGAAGCGGTACACAGTGCGCACACCTaGGGCGGGGCCCCCGCAACGCCGGCGCGGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAVGEAVHSAHT*GGAPATPARSL Trigger: CAGACTCCGCGCCGGCGTTGCGGGGGCCCCGCCCCAGGTGTGCGCACTGTGTACCGCTTCGCCAACCGCACC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS TCA 72 bp | AACTGCCCCACCGAGGCCAGCGCTGCACCCTGCCGCTaGCATTGTGCCCGCGCGCCCGCCAGGGTCAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: NCPTEASAAPCR*HCARAPARVSR Trigger: CCGACTGACCCTGGCGGGCGCGCGGGCACAATGTCAGCGGCAGGGTGCAGCGCTGGCCTCGGTGGGGCAGTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | CGAAGCGTGCTCCTGGCGCAGGAAAGCCGGTGCGGTTaGCGAAGCGGTACACAGTGCGCACACCTGGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSVLLAQESRCG*RSGTQCAHLGR Trigger: CCGCCCCAGGTGTGCGCACTGTGTACCGCTTCGCCAACCGCACCGGCTTTCCTGCGCCAGGAGCACGCTTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 72 bp | TCGAAGCGTGCTCCTGGCGCAGGAAAGCCGGTGCGGTaGGCGAAGCGGTACACAGTGCGCACACCTGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SKRAPGAGKPVR*AKRYTVRTPGA Trigger: CGCCCCAGGTGTGCGCACTGTGTACCGCTTCGCCAACCGCACCGGCTTTCCTGCGCCAGGAGCACGCTTCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | AGGCGTCGAAGCGTGCTCCTGGCGCAGGAAAGCCGGTaGGGTTGGCGAAGCGGTACACAGTGCGCACACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRRSVLLAQESR*GWRSGTQCAHL Trigger: CAGGTGTGCGCACTGTGTACCGCTTCGCCAACCGCACCGGCTTTCCTGCGCCAGGAGCACGCTTCGACGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | AGTAGCTCCCAGGGTGGGAGGCTGGGCACTGGGCTCTaGTACCTCAGGCAGCTGGTCTTCTGGGCCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSQGGRLGTGL*YLRQLVFWALL Trigger: CAGCAGGGCCCAGAAGACCAGCTGCCTGAGGTAGCAGAGCCCAGTGCCCAGCCTCCCACCCTGGGAGCTACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | GGTCGCGTCTCCCGTAGCTCCGAACACCCGGGAGACTaGTGCGGTCACCATAGCAACCAGGACGCGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRVSRSSEHPGD*CGHHSNQDATE Trigger: CTCAGTCGCGTCCTGGTTGCTATGGTGACCGCAGCAGTCTCCCGGGTGTTCGGAGCTACGGGAGACGCGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS TCA 72 bp | CCAGGGGTGCGAAGGCAGAGTGTTGAGAGGCTCCAGTaGCTCCTGGGCCACCATCTGGCCCTTAGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGVRRQSVERLQ*LLGHHLALRLW Trigger: CCAGAGCCTAAGGGCCAGATGGTGGCCCAGGAGTCACTGGAGCCTCTCAACACTCTGCCTTCGCACCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS TCA 72 bp | CCACCAGGGATGACCAGGGGTGCGAAGGCAGAGTGTTaGGAGGCTCCAGTGACTCCTGGGCCACCATCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPGMTRGAKAEC*EAPVTPGPPSG Trigger: GCCAGATGGTGGCCCAGGAGTCACTGGAGCCTCTCAACACTCTGCCTTCGCACCCCTGGTCATCCCTGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | TGTCAGGTGACCAGCTCGGCGCCTGCAATCTCTCTCTaGATCCTCCCAGGCCCGGCGATGGGCAAAGTACCG | + |
|
Preference number: 6 (lower is better) Translates to: CQVTSSAPAISL*ILPGPAMGKVP Trigger: CGGTACTTTGCCCATCGCCGGGCCTGGGAGGATGCAGAGAGAGATTGCAGGCGCCGAGCTGGTCACCTGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | TCCATGGGTGTGGACTGGGAGCCAGGGTCTAGTCCTTaGCCAGGCAGTGGTAGCCAGGTGGCCAGCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMGVDWEPGSSP*PGSGSQVASTF Trigger: GAAGGTGCTGGCCACCTGGCTACCACTGCCTGGCCAAGGACTAGACCCTGGCTCCCAGTCCACACCCATGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 90 bp | TCCATGGGGACCACCAGGGATGACCAGGGGTGCGAAGGCAGAGTGTaGAGAGGCTCCAGTGACTCCTGGGCCACCATCTGGCCCTTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SMGTTRDDQGCEGRV*RGSSDSWATIWPLG Trigger: GCCTAAGGGCCAGATGGTGGCCCAGGAGTCACTGGAGCCTCTCAACACTCTGCCTTCGCACCCCTGGTCATCCCTGGTGGTCCCCATGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 90 bp | TGGTCACTCTCTGAAGCCTCTGTGGCTGCAGAAGGCCTCATGTGGTaGGCAGTAGCTCCCAGGGTGGGAGGCTGGGCACTGGGCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSLSEASVAAEGLMW*AVAPRVGGWALGSA Trigger: AGCAGAGCCCAGTGCCCAGCCTCCCACCCTGGGAGCTACTGCCAACCACATGAGGCCTTCTGCAGCCACAGAGGCTTCAGAGAGTGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS TCA 72 bp | TGCTGCGGTCACCATAGCAACCAGGACGCGACTGAGTaGTCGGGTACCGAACCGTGCGGTCTGAGAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CCGHHSNQDATE*SGTEPCGLRAS Trigger: GCTGGCTCTCAGACCGCACGGTTCGGTACCCGATCACTCAGTCGCGTCCTGGTTGCTATGGTGACCGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | ATGGTGATGAGCTCGGAAGCAGTAGGCGTCGAAGCGTaGTCCTGGCGCAGGAAAGCCGGTGCGGTTGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: MVMSSEAVGVEA*SWRRKAGAVGE Trigger: TTCGCCAACCGCACCGGCTTTCCTGCGCCAGGAGCACGCTTCGACGCCTACTGCTTCCGAGCTCATCACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | CAGGGGTTGTTCTCGCAGGGATCTGTGGGATCTTCCTaGCCGCTGGCCACCTCTTCCCAGAAGCCCTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: QGLFSQGSVGSS*PLATSSQKPFT Trigger: CGTGAAGGGCTTCTGGGAAGAGGTGGCCAGCGGGCAGGAAGATCCCACAGATCCCTGCGAGAACAACCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | CAGCATAGCCCTGGTCACAACTACAGCCATACACGGTaGCGTTGGTGTGGCAGGTGCCCCCATGCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QHSPGHNYSHTR*RWCGRCPHAGR Trigger: CCTGCCTGCATGGGGGCACCTGCCACACCAACGGCACCGTGTATGGCTGTAGTTGTGACCAGGGCTATGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | CTCTCTGAAGCCTCTGTGGCTGCAGAAGGCCTCATGTaGTTGGCAGTAGCTCCCAGGGTGGGAGGCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSEASVAAEGLM*LAVAPRVGGWA Trigger: TGCCCAGCCTCCCACCCTGGGAGCTACTGCCAACCACATGAGGCCTTCTGCAGCCACAGAGGCTTCAGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | GACTCCTGGGCCACCATCTGGCCCTTAGGCTCTGGGTaGCCTTCGGAGCTTGTAGAGGTCAGTGTGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: DSWATIWPLGSG*PSELVEVSVGM Trigger: CATGCCCACACTGACCTCTACAAGCTCCGAAGGCCACCCAGAGCCTAAGGGCCAGATGGTGGCCCAGGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 90 bp | GACACCCGTCCCTGCCAGCCCTTGGCCACACGCACCACGTTGTCTTaGGCCACCAAGATTGGCAAATCCTGTCGCTGGCCTGATGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: DTRPCQPLATRTTLS*ATKIGKSCRWPDAV Trigger: GACTGCATCAGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGACGGGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS TCA 72 bp | CGCGCTAGGAGTACTGTCGGTGCTTGGGACACTGGGTaGGATCAACGACGGGGACCACATCAGGGACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RARSTVGAWDTG*DQRRGPHQGLW Trigger: CCAGAGTCCCTGATGTGGTCCCCGTCGTTGATCTCACCCAGTGTCCCAAGCACCGACAGTACTCCTAGCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | GGCCCCTCCTCATCGTGGGGGTGGGTGCTACCTGTGTaGCCAAGGGTGTTGTCGCTTCCATATCTACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPSSSWGWVLPV*PRVLSLPYLLP Trigger: TGGGAGTAGATATGGAAGCGACAACACCCTTGGGCACACAGGTAGCACCCACCCCCACGATGAGGAGGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | CCTGCCAGCCCTTGGCCACACGCACCACGTTGTCTTTaGCCACCAAGATTGGCAAATCCTGTCGCTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PASPWPHAPRCL*PPRLANPVAGL Trigger: CAGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | TTGGCAGCGATACAGCCCAGAGTCGCTTGCTCGAAGTaGCCCCAGCAGAAGGGTAGCATTGGCTCTGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LAAIQPRVACSK*PQQKGSIGSVP Trigger: CGGCACAGAGCCAATGCTACCCTTCTGCTGGGGCCACTTCGAGCAAGCGACTCTGGGCTGTATCGCTGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | GGAAGTCAGGTGCTATCACCTCCTGTTCCCCCAAGCTaGGCTTTAGTTCTCGGCCTGGAGGCCCCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSQVLSPPVPPS*ALVLGLEAPLL Trigger: CAGCAGAGGGGCCTCCAGGCCGAGAACTAAAGCCCAGCTTGGGGGAACAGGAGGTGATAGCACCTGACTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | TGGGTTCCCCTGAGGAAACTGAGGCCACTTCATCCATaGGGACCACCAGGGATGACCAGGGGTGCGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WVPLRKLRPLHP*GPPGMTRGAKA Trigger: TGCCTTCGCACCCCTGGTCATCCCTGGTGGTCCCCATGGATGAAGTGGCCTCAGTTTCCTCAGGGGAACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | TGTTCTCGCAGGGATCTGTGGGATCTTCCTGCCCGCTaGCCACCTCTTCCCAGAAGCCCTTCACGCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CSRRDLWDLPAR*PPLPRSPSRLD Trigger: GTCCAAGCGTGAAGGGCTTCTGGGAAGAGGTGGCCAGCGGGCAGGAAGATCCCACAGATCCCTGCGAGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CAA 72 bp | CCCTGCCAGCCCTTGGCCACACGCACCACGTTGTCTTaGGCCACCAAGATTGGCAAATCCTGTCGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PCQPLATRTTLS*ATKIGKSCRWP Trigger: AGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CAA 72 bp | ACCCGTCCCTGCCAGCCCTTGGCCACACGCACCACGTaGTCTTTGGCCACCAAGATTGGCAAATCCTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: TRPCQPLATRTT*SLATKIGKSCR Trigger: GCGACAGGATTTGCCAATCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGACGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 90 bp | GGCAATGACACCCGTCCCTGCCAGCCCTTGGCCACACGCACCACGTaGTCTTTGGCCACCAAGATTGGCAAATCCTGTCGCTGGCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GNDTRPCQPLATRTT*SLATKIGKSCRWPD Trigger: ATCAGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGACGGGTGTCATTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | CAGGGACTCTGGGAGACTCCTGCTGCCAAGAGAGCCTaGTCCTGGCTCATCCACTTCGTTGGTCAGAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: QGLWETPAAKRA*SWLIHFVGQNG Trigger: GCCATTCTGACCAACGAAGTGGATGAGCCAGGAGCAGGCTCTCTTGGCAGCAGGAGTCTCCCAGAGTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | GATAAGCAGGCAATGACACCCGTCCCTGCCAGCCCTTaGCCACACGCACCACGTTGTCTTTGGCCACCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: DKQAMTPVPASP*PHAPRCLWPPR Trigger: TCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCAAGGGCTGGCAGGGACGGGTGTCATTGCCTGCTTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | GCTACCTCAGGCAGCTGGTCTTCTGGGCCCTGCTGCTaGAAGTGTCGACCATTCAACCCTTTAAAGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ATSGSWSSGPCC*KCRPFNPLKRP Trigger: GGGCCGCTTTAAAGGGTTGAATGGTCGACACTTCCAGCAGCAGGGCCCAGAAGACCAGCTGCCTGAGGTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | AAAGCCACTGTAGGTTCCATGCTCACGGCAACCCCATaGGCTTCCATGGGTGTGGACTGGGAGCCAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KATVGSMLTATP*ASMGVDWEPGS Trigger: AGACCCTGGCTCCCAGTCCACACCCATGGAAGCCCATGGGGTTGCCGTGAGCATGGAACCTACAGTGGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 72 bp | TCGTGGGGGTGGGTGCTACCTGTGTGCCCAAGGGTGTaGTCGCTTCCATATCTACTCCCATGTCGCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SWGWVLPVCPRV*SLPYLLPCRWD Trigger: GTCCCAGCGACATGGGAGTAGATATGGAAGCGACAACACCCTTGGGCACACAGGTAGCACCCACCCCCACGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS TCA 72 bp | CTGTGGCTGGCTTCAACTGGGGCAGCTATGGTGGTCTaGAATGGGGTTTCGAGGTCTTCCGCTCCAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LWLASTGAAMVV*NGVSRSSAPRL Trigger: CAGCCTTGGAGCGGAAGACCTCGAAACCCCATTTCAGACCACCATAGCTGCCCCAGTTGAAGCCAGCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS TCA 72 bp | TCGGTGTGGATGGTGGTGGTGTCTACGCATCCGATGTaGCCGCCTGGGTTTGATGCACATGATCTGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SVWMVVVSTHPM*PPGFDAHDLRP Trigger: CGGCCTCAGATCATGTGCATCAAACCCAGGCGGTCACATCGGATGCGTAGACACCACCACCATCCACACCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | ATCCGAGGAATGTCTCGCAGGGAGCTTAGCCGTGGTTaGAGGGTAAAGAAGCAGGGCAGGGCCACTAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IRGMSRRELSRG*RVKKQGRATSS Trigger: AGAGCTAGTGGCCCTGCCCTGCTTCTTTACCCTGCAACCACGGCTAAGCTCCCTGCGAGACATTCCTCGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | CTTTACCACTTGGCAGCGATACAGCCCAGAGTCGCTTaGTCGAAGTGGCCCCAGCAGAAGGGTAGCATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LYHLAAIQPRVA*SKWPQQKGSIG Trigger: GCCAATGCTACCCTTCTGCTGGGGCCACTTCGAGCAAGCGACTCTGGGCTGTATCGCTGCCAAGTGGTAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | CTAGAGTCCAAAGAAGCCCATGGGCCAGAGATGGGGTaGTTTGTAGCCCGCATGGAGCTGGTCCCCTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: LESKEAHGPEMG*FVARMELVPSI Trigger: AATCGAGGGGACCAGCTCCATGCGGGCTACAAAGCACCCCATCTCTGGCCCATGGGCTTCTTTGGACTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | CTGTTCTTCTGGGACCCAGGAGGGAAGTGGAGAAGCTaGGGACAGTGGGACTGGGGTCATATTGGGGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: LFFWDPGGKWRS*GQWDWGHIGDK Trigger: CTTGTCCCCAATATGACCCCAGTCCCACTGTCCCCAGCTTCTCCACTTCCCTCCTGGGTCCCAGAAGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | GCTGGCTTCAACTGGGGCAGCTATGGTGGTCTGAAATaGGGTTTCGAGGTCTTCCGCTCCAAGGCTGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGFNWGSYGGLK*GFEVFRSKADR Trigger: CCTGTCAGCCTTGGAGCGGAAGACCTCGAAACCCCATTTCAGACCACCATAGCTGCCCCAGTTGAAGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 90 bp | AGACTCCTGCTGCCAAGAGAGCCTGCTCCTGGCTCATCCACTTCGTaGGTCAGAATGGCCCAAGGACTGTGGCTCTGGTCACTCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLLLPREPAPGSSTS*VRMAQGLWLWSLSE Trigger: TTCAGAGAGTGACCAGAGCCACAGTCCTTGGGCCATTCTGACCAACGAAGTGGATGAGCCAGGAGCAGGCTCTCTTGGCAGCAGGAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 90 bp | GATCTTCCTGCCCGCTGGCCACCTCTTCCCAGAAGCCCTTCACGCTaGGACTCTCAGCCACAACATTCAGGTCTGATTCATCCAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: DLPARWPPLPRSPSR*DSQPQHSGLIHPSP Trigger: TGGGCTTGGATGAATCAGACCTGAATGTTGTGGCTGAGAGTCCAAGCGTGAAGGGCTTCTGGGAAGAGGTGGCCAGCGGGCAGGAAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS GCA 72 bp | GGCTCTGCTACCTCAGGCAGCTGGTCTTCTGGGCCCTaGTGCTGGAAGTGTCGACCATTCAACCCTTTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSATSGSWSSGP*CWKCRPFNPLK Trigger: CTTTAAAGGGTTGAATGGTCGACACTTCCAGCAGCAGGGCCCAGAAGACCAGCTGCCTGAGGTAGCAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | AGCCTGCTCCTGGCTCATCCACTTCGTTGGTCAGAATaGCCCAAGGACTGTGGCTCTGGTCACTCTCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLLLAHPLRWSE*PKDCGSGHSLK Trigger: CTTCAGAGAGTGACCAGAGCCACAGTCCTTGGGCCATTCTGACCAACGAAGTGGATGAGCCAGGAGCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | GGGATCTGTGGCTGGCTTCAACTGGGGCAGCTATGGTaGTCTGAAATGGGGTTTCGAGGTCTTCCGCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GICGWLQLGQLW*SEMGFRGLPLQ Trigger: TTGGAGCGGAAGACCTCGAAACCCCATTTCAGACCACCATAGCTGCCCCAGTTGAAGCCAGCCACAGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | CTTGCGCACACCAACAAGAGAGGCATTCTCCACTGCTaGAGGGGGACCACACAGCACTGTACCCTTCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAHTNKRGILHC*RGTTQHCTLLA Trigger: TGCAAGAAGGGTACAGTGCTGTGTGGTCCCCCTCCAGCAGTGGAGAATGCCTCTCTTGTTGGTGTGCGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 72 bp | GCCCGCTGGCCACCTCTTCCCAGAAGCCCTTCACGCTaGGACTCTCAGCCACAACATTCAGGTCTGATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ARWPPLPRSPSR*DSQPQHSGLIH Trigger: ATGAATCAGACCTGAATGTTGTGGCTGAGAGTCCAAGCGTGAAGGGCTTCTGGGAAGAGGTGGCCAGCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CCA 72 bp | CAGGTATCAGAGTGCTGGGTATGTCCCACAGTCCTGTaGGTTCCCCTGAGGAAACTGAGGCCACTTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: QVSECWVCPTVL*VPLRKLRPLHP Trigger: TGGATGAAGTGGCCTCAGTTTCCTCAGGGGAACCCACAGGACTGTGGGACATACCCAGCACTCTGATACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS CAA 72 bp | TGGCCACACGCACCACGTTGTCTTTGGCCACCAAGATaGGCAAATCCTGTCGCTGGCCTGATGCAGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WPHAPRCLWPPR*ANPVAGLMQSE Trigger: TTCAGACTGCATCAGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAAGACAACGTGGTGCGTGTGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
||
| CDS TCA 72 bp | AAGTCAAGTCTGGGGGTTCGCCTTCTCCACTGGACATaGGAGGTTCCTGGAAGTCAGGTGCTATCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: KSSLGVRLLHWT*EVPGSQVLSPP Trigger: AGGAGGTGATAGCACCTGACTTCCAGGAACCTCTCATGTCCAGTGGAGAAGGCGAACCCCCAGACTTGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS GCA 72 bp | CTGATTCATCCAAGCCCAAGGATACAGGTATCAGAGTaGTGGGTATGTCCCACAGTCCTGTGGGTTCCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LIHPSPRIQVSE*WVCPTVLWVPL Trigger: CAGGGGAACCCACAGGACTGTGGGACATACCCAGCACTCTGATACCTGTATCCTTGGGCTTGGATGAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | ATTCATCCAAGCCCAAGGATACAGGTATCAGAGTGCTaGGTATGTCCCACAGTCCTGTGGGTTCCCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: IHPSPRIQVSEC*VCPTVLWVPLR Trigger: CCTCAGGGGAACCCACAGGACTGTGGGACATACCCAGCACTCTGATACCTGTATCCTTGGGCTTGGATGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | GCAGAAATCCCCTTCGTCTTTCTCCCAGTCTTCCGCTaGGTGTCTCTTGTGTTTTCTGTGCTCCTTGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: AEIPFVFLPVFR*VSLVFSVLLAR Trigger: CCTCGCAAGGAGCACAGAAAACACAAGAGACACCCAGCGGAAGACTGGGAGAAAGACGAAGGGGATTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 72 bp | TTTGGCCACCAAGATTGGCAAATCCTGTCGCTGGCCTaGTGCAGTCTGAACCTTAGTCCACTTGATCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: FGHQDWQILSLA*CSLNLSPLDPR Trigger: CCTCGGATCAAGTGGACTAAGGTTCAGACTGCATCAGGCCAGCGACAGGATTTGCCAATCTTGGTGGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | CAGTTCTCATATTGCAGTCCTGTGTTGTCTGTCCACTaGAAGTCCCTCTCTACTGTCCGGTCATTCAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: QFSYCSPVLSVH*KSLSTVRSFRP Trigger: CGGCCTGAATGACCGGACAGTAGAGAGGGACTTCCAGTGGACAGACAACACAGGACTGCAATATGAGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | GTGGCCACTCGGTGCTGGGAGAATCCTTCATCACACTaGTATCGCACAGTGGCATGGACATTGTACTTGATC | + |
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Preference number: 6 (lower is better) Translates to: VATRCWENPSSH*YRTVAWTLYLI Trigger: GATCAAGTACAATGTCCATGCCACTGTGCGATACCAGTGTGATGAAGGATTCTCCCAGCACCGAGTGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 72 bp | AAGATTGGCAAATCCTGTCGCTGGCCTGATGCAGTCTaGACCTTAGTCCACTTGATCCGAGGAATGTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: KIGKSCRWPDAV*TLVHLIRGMSR Trigger: GCGAGACATTCCTCGGATCAAGTGGACTAAGGTTCAGACTGCATCAGGCCAGCGACAGGATTTGCCAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | ATTCATCGTCACATTACTAGAGTCCAAAGAAGCCCATaGGCCAGAGATGGGGTGCTTTGTAGCCCGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: IHRHITRVQRSP*ARDGVLCSPHG Trigger: TCCATGCGGGCTACAAAGCACCCCATCTCTGGCCCATGGGCTTCTTTGGACTCTAGTAATGTGACGATGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | CTCATGTCCAAAACTGTTAATGAACTTGTGCTCTTCTaGCGAATGGACGCTTGTCAGGTGACCAGCTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LMSKTVNELVLF*RMDACQVTSSA Trigger: CGCCGAGCTGGTCACCTGACAAGCGTCCATTCGCCAGAAGAGCACAAGTTCATTAACAGTTTTGGACATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS TCA 72 bp | CACACTGGTATCGCACAGTGGCATGGACATTGTACTTaGTCTTGCGCACACCAACAAGAGAGGCATTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HTGIAQWHGHCT*SCAHQQERHSP Trigger: TGGAGAATGCCTCTCTTGTTGGTGTGCGCAAGATCAAGTACAATGTCCATGCCACTGTGCGATACCAGTGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CAA 72 bp | GAAATTATCCGGCTGCTTCTCCCTCCAGTTCTCATATaGCAGTCCTGTGTTGTCTGTCCACTGGAAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: EIIRLLLPPVLI*QSCVVCPLEVP Trigger: AGGGACTTCCAGTGGACAGACAACACAGGACTGCAATATGAGAACTGGAGGGAGAAGCAGCCGGATAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CAA 72 bp | TGGTATCGCACAGTGGCATGGACATTGTACTTGATCTaGCGCACACCAACAAGAGAGGCATTCTCCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: WYRTVAWTLYLI*RTPTREAFSTA Trigger: AGCAGTGGAGAATGCCTCTCTTGTTGGTGTGCGCAAGATCAAGTACAATGTCCATGCCACTGTGCGATACCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CAA 72 bp | TCACACTGGTATCGCACAGTGGCATGGACATTGTACTaGATCTTGCGCACACCAACAAGAGAGGCATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SHWYRTVAWTLY*ILRTPTREAFS Trigger: GGAGAATGCCTCTCTTGTTGGTGTGCGCAAGATCAAGTACAATGTCCATGCCACTGTGCGATACCAGTGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CAA 72 bp | CCTTCATCACACTGGTATCGCACAGTGGCATGGACATaGTACTTGATCTTGCGCACACCAACAAGAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PSSHWYRTVAWT*YLILRTPTREA Trigger: TGCCTCTCTTGTTGGTGTGCGCAAGATCAAGTACAATGTCCATGCCACTGTGCGATACCAGTGTGATGAAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CAA 90 bp | TGGGAGAATCCTTCATCACACTGGTATCGCACAGTGGCATGGACATaGTACTTGATCTTGCGCACACCAACAAGAGAGGCATTCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: WENPSSHWYRTVAWT*YLILRTPTREAFST Trigger: AGTGGAGAATGCCTCTCTTGTTGGTGTGCGCAAGATCAAGTACAATGTCCATGCCACTGTGCGATACCAGTGTGATGAAGGATTCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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| CDS CCA 72 bp | GAGAATCCTTCATCACACTGGTATCGCACAGTGGCATaGACATTGTACTTGATCTTGCGCACACCAACAAGA | + |
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Preference number: 6 (lower is better) Translates to: ENPSSHWYRTVA*TLYLILRTPTR Trigger: TCTTGTTGGTGTGCGCAAGATCAAGTACAATGTCCATGCCACTGTGCGATACCAGTGTGATGAAGGATTCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002412.9 |
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