RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NCAM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022762

Ensembl transcript IDs: ENSMUST00000037785.14, ENSMUST00000067602.5

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTaGCTTCGTCTTAGTCTGAAAGCCCTCACAATAGTGTGTTTGCCC +
Preference number: 1 (lower is better)
Translates to: GFPEIPLIKSIPFIM*LRLSLKALTIVCLP
Trigger: GGGCAAACACACTATTGTGAGGGCTTTCAGACTAAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CCA 90 bp GAAGGAGAGGTCTCTGTGTTAATTCTGAATTACAGCAAAGCACTGTaGATAGAACAGCACCTTAGCATTCAGTTGGGAACACTCAGTCTA +
Preference number: 1 (lower is better)
Translates to: EGEVSVLILNYSKAL*IEQHLSIQLGTLSL
Trigger: TAGACTGAGTGTTCCCAACTGAATGCTAAGGTGCTGTTCTATCCACAGTGCTTTGCTGTAATTCAGAATTAACACAGAGACCTCTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR GCA 90 bp CCCATGTGGTTCTATCCAGGAAAAGAAATCAGTATTCATGGCTATTaGTTCATAGACACCACTAAGCCTGTTCACTTTACACAAACAAAC +
Preference number: 1 (lower is better)
Translates to: PMWFYPGKEISIHGY*FIDTTKPVHFTQTN
Trigger: GTTTGTTTGTGTAAAGTGAACAGGCTTAGTGGTGTCTATGAAGCAATAGCCATGAATACTGATTTCTTTTCCTGGATAGAACCACATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR GCA 90 bp AGGGCTTTCATACACTTCCCACATTTAGCTCACAACGTTTTTCTCTaGCTTCCATTACAACCTAATATTTTAGAGAGAAACATATTTGTT +
Preference number: 1 (lower is better)
Translates to: RAFIHFPHLAHNVFL*LPLQPNILERNIFV
Trigger: AACAAATATGTTTCTCTCTAAAATATTAGGTTGTAATGGAAGGCAGAGAAAAACGTTGTGAGCTAAATGTGGGAAGTGTATGAAAGCCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR GCA 90 bp ATAGTCTCTGACTTAAGACATCATCAAAACGCTACTCCCGACATATaGATATTGATGGTCACAAATGTGGTTTTTGTTACTCATAAGTTA +
Preference number: 1 (lower is better)
Translates to: IVSDLRHHQNATPDI*ILMVTNVVFVTHKL
Trigger: TAACTTATGAGTAACAAAAACCACATTTGTGACCATCAATATGCATATGTCGGGAGTAGCGTTTTGATGATGTCTTAAGTCAGAGACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CAA 90 bp CCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTaGTATTCTGATGCTTGCAAAAGAGAGGGAATGTCAGCAGTAGTG +
Preference number: 2 (lower is better)
Translates to: PLISTSFKVMPKMAT*YSDACKREGMSAVV
Trigger: CACTACTGCTGACATTCCCTCTCTTTTGCAAGCATCAGAATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
3UTR-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGAAAGAAATGGGTTGTaGCCAGAGGAGTTTGTCGTA +
Preference number: 2 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLERNGL*PEEFVV
Trigger: TACGACAAACTCCTCTGGCCACAACCCATTTCTTTC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CAA 90 bp GGCATCAAATTCAAGGACAATATTGGTTCAGCATCTCCTAGACAATaGATACCATGTATGGAATCTATCCAAAGTTACCTAACAGCTCCA +
Preference number: 2 (lower is better)
Translates to: GIKFKDNIGSASPRQ*IPCMESIQSYLTAP
Trigger: TGGAGCTGTTAGGTAACTTTGGATAGATTCCATACATGGTATCAATTGTCTAGGAGATGCTGAACCAATATTGTCCTTGAATTTGATGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCTACTCTTTTATCTCTaGTCAGGGAGTACCATAGAA +
Preference number: 2 (lower is better)
Translates to: FPLISTSFKVMPKMATLYLLFYL*SGSTIE
Trigger: TTCTATGGTACTCCCTGATCAGAGATAAAAGAGTAG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
3UTR-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCACAACGTTTTTCTCTaGCTTCCATTACAACCTAAT +
Preference number: 2 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLHNVFL*LPLQPN
Trigger: ATTAGGTTGTAATGGAAGGCAGAGAAAAACGTTGTG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTGAAACCCCAAAATTaGTGCCAATCAAGTCTTTAT +
Preference number: 2 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLKPQN*CQSSLY
Trigger: ATAAAGACTTGATTGGCACCAATTTTGGGGTTTCAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CAA 90 bp TCTGACTTAAGACATCATCAAAACGCTACTCCCGACATATGCATATaGATGGTCACAAATGTGGTTTTTGTTACTCATAAGTTAAGTCAT +
Preference number: 2 (lower is better)
Translates to: SDLRHHQNATPDICI*MVTNVVFVTHKLSH
Trigger: ATGACTTAACTTATGAGTAACAAAAACCACATTTGTGACCATCAATATGCATATGTCGGGAGTAGCGTTTTGATGATGTCTTAAGTCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTACAGAAAGAAATGGGTaGTGGCCAGAGGAGTTTGTC +
Preference number: 3 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLTERNG*WPEEFV
Trigger: GACAAACTCCTCTGGCCACAACCCATTTCTTTCTGT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTGTGGCCAGAGGAGTTaGTCGTATGTATATGTGTAC +
Preference number: 3 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLCGQRS*SYVYVY
Trigger: GTACACATATACATACGACAAACTCCTCTGGCCACA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACCTAAAATGGCCACTTaGTATTCTGATGCTTGCAAA +
Preference number: 3 (lower is better)
Translates to: YLNTAASCFPLISTSFKVPKMAT*YSDACK
Trigger: TTTGCAAGCATCAGAATACAAAGTGGCCATTTTAGG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
3UTR GCA 72 bp GAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTaGCTTCGTCTTAGTCTGAAAGCCCTCACAATAGTG +
Preference number: 3 (lower is better)
Translates to: EIPLIKSIPFIM*LRLSLKALTIV
Trigger: CACTATTGTGAGGGCTTTCAGACTAAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CCA 72 bp GAGCAAGTAAAGATGGTTATATTTGTCTATATGGTGTaGTTGTATGTGCATGTGTGTGAGTGTTGGTGTGTG +
Preference number: 3 (lower is better)
Translates to: EQVKMVIFVYMV*LYVHVCECWCV
Trigger: CACACACCAACACTCACACACATGCACATACAACCACACCATATAGACAAATATAACCATCTTTACTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
3UTR-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGTCAATGGAATAGTTTaGGTCATAGTGTCACTCCAA +
Preference number: 3 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLVNGIV*VIVSLQ
Trigger: TTGGAGTGACACTATGACCAAAACTATTCCATTGAC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CCA 72 bp GAGAAGTGGCTTATGACTTTACACAATAATGTAACTTaGACAATAAAACGAACAAGAGCCTTGCCATTTCCT +
Preference number: 3 (lower is better)
Translates to: EKWLMTLHNNVT*TIKRTRALPFP
Trigger: AGGAAATGGCAAGGCTCTTGTTCGTTTTATTGTCCAAGTTACATTATTGTGTAAAGTCATAAGCCACTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
3UTR GCA 72 bp ATACACTTCCCACATTTAGCTCACAACGTTTTTCTCTaGCTTCCATTACAACCTAATATTTTAGAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: IHFPHLAHNVFL*LPLQPNILERN
Trigger: GTTTCTCTCTAAAATATTAGGTTGTAATGGAAGGCAGAGAAAAACGTTGTGAGCTAAATGTGGGAAGTGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR TCA 72 bp ATATTCTCCAATATATTAATATTAGAGCTGTTCAATTaGTACCCAAACACTAAAGGTTGTGAGGAGGGGAGA +
Preference number: 3 (lower is better)
Translates to: IFSNILILELFN*YPNTKGCEEGR
Trigger: TCTCCCCTCCTCACAACCTTTAGTGTTTGGGTATCAATTGAACAGCTCTAATATTAATATATTGGAGAATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATGTGGTACAACCAGCTaGCCGCAGGGGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVCGTTS*PQGLGN
Trigger: GTTCCCCAGCCCCTGCGGTCAGCTGGTTGTACCACA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTGTGGTACAACCAGCTaGCCGCAGGGGCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLCGTTS*PQGLGN
Trigger: GTTCCCCAGCCCCTGCGGTCAGCTGGTTGTACCACA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATGCTGACCGCAGGGGCTaGGGAACTGCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYADRRG*GTAHSA
Trigger: TGCAGAGTGAGCAGTTCCCCAGCCCCTGCGGTCAGC...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGCTGACCGCAGGGGCTaGGGAACTGCTCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLADRRG*GTAHSA
Trigger: TGCAGAGTGAGCAGTTCCCCAGCCCCTGCGGTCAGC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTGCATGCTCCTCTGGTaGCCACCAATCCGACTAGCG +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYCMLLW*PPIRLA
Trigger: CGCTAGTCGGATTGGTGGGCACCAGAGGAGCATGCA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTGCATGCTCCTCTGGTaGCCACCAATCCGACTAGCG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLCMLLW*PPIRLA
Trigger: CGCTAGTCGGATTGGTGGGCACCAGAGGAGCATGCA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCGATGTCCAGGTGCATaGTCCTCTGGTGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYRCPGA*SSGAHQ
Trigger: TTGGTGGGCACCAGAGGAGCATGCACCTGGACATCG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCGATGTCCAGGTGCATaGTCCTCTGGTGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLRCPGA*SSGAHQ
Trigger: TTGGTGGGCACCAGAGGAGCATGCACCTGGACATCG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATGAACCAAGAGATGGTTaGATCTGGGGAGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYEPRDG*IWGARG
Trigger: GCCTCGGGCTCCCCAGATCCAACCATCTCTTGGTTC...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGAACCAAGAGATGGTTaGATCTGGGGAGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLEPRDG*IWGARG
Trigger: GCCTCGGGCTCCCCAGATCCAACCATCTCTTGGTTC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAAGGTGCATGCTCCTCTaGTGCCCACCAATCCGACTA +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVRCMLL*CPPIRL
Trigger: TAGTCGGATTGGTGGGCACCAGAGGAGCATGCACCT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAATCTCTAATGTGCAGTaGAGAGCGTCCATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVISNVQ*RASMLP
Trigger: GGGCAGCATGGACGCTCTTCACTGCACATTAGAGAT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATCTTCTCCAGTGGATTaGCGCAGGTGGGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVSSPVD*RRWVCC
Trigger: ACAGCAAACCCACCTGCGTCAATCCACTGGAGAAGA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCAGGGGCTGGGGAACTaGTCACTCTGCAAACCACTT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYQGLGN*SLCKPL
Trigger: AAGTGGTTTGCAGAGTGAGCAGTTCCCCAGCCCCTG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCAGGGGCTGGGGAACTaGTCACTCTGCAAACCACTT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLQGLGN*SLCKPL
Trigger: AAGTGGTTTGCAGAGTGAGCAGTTCCCCAGCCCCTG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAGGTGCATGCTCCTCTaGTGCCCACCAATCCGACTA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLRCMLL*CPPIRL
Trigger: TAGTCGGATTGGTGGGCACCAGAGGAGCATGCACCT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATTGGCTGTCCATGTATaGAAGGGGGACTTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVLAVHV*KGDLAH
Trigger: GTGAGCCAAGTCCCCCTTCCATACATGGACAGCCAA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACCCTCTGCGTTGAAATaGTCTTCTCTCCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVPSALK*SSLLEG
Trigger: ACCCTCAAGGAGAGAAGATCATTTCAACGCAGAGGG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATTGGCATCTGTCGCTTaGCAGCGATATATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVLASVA*QRYIPA
Trigger: TGCAGGGATATATCGCTGTCAAGCGACAGATGCCAA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCCTTGCTTGAACTCTTaGGGGGACACCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYPCLNS*GDTTSL
Trigger: CAGAGAAGTGGTGTCCCCTCAAGAGTTCAAGCAAGG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCCTTGCTTGAACTCTTaGGGGGACACCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLPCLNS*GDTTSL
Trigger: CAGAGAAGTGGTGTCCCCTCAAGAGTTCAAGCAAGG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTGTCGGGGATGGTGGTaGCTTCCTCATTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYCRGWW*LPHCGT
Trigger: TGTACCACAATGAGGAAGTCACCACCATCCCCGACA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTGTCGGGGATGGTGGTaGCTTCCTCATTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLCRGWW*LPHCGT
Trigger: TGTACCACAATGAGGAAGTCACCACCATCCCCGACA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTATCTCTAATGTGCAGTaGAGAGCGTCCATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLISNVQ*RASMLP
Trigger: GGGCAGCATGGACGCTCTTCACTGCACATTAGAGAT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTCTTCTCCAGTGGATTaGCGCAGGTGGGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLSSPVD*RRWVCC
Trigger: ACAGCAAACCCACCTGCGTCAATCCACTGGAGAAGA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATGTCTGTTGGCAGCTGTaGTTTGCACTTCGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYVCWQL*FALRSP
Trigger: TGGGCTACGAAGTGCAAATCACAGCTGCCAACAGAC...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGTCTGTTGGCAGCTGTaGTTTGCACTTCGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLVCWQL*FALRSP
Trigger: TGGGCTACGAAGTGCAAATCACAGCTGCCAACAGAC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAAGCATTCAGATGCCATaGCTGGCCTCCATTTTCACC +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVSIQMP*LASIFT
Trigger: GGTGAAAATGGAGGCCAGTCATGGCATCTGAATGCT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAGGGAACTGCTCACTCTaGAAACCACTTCTGCATCCT +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVGNCSL*KPLLHP
Trigger: AGGATGCAGAAGTGGTTTGCAGAGTGAGCAGTTCCC...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAAACAGGCTCCCCTTCTaGTTCACATACGAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVNRLPF*FTYECD
Trigger: GTCACACTCGTATGTGAAGCAGAAGGGGAGCCTGTT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAAGTCTCCTTGACCTTTaGCATTCACTGCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVSLLDL*HSLLQP
Trigger: GGGTTGCAGCAGTGAATGGCAAAGGTCAAGGAGACT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTGGCTGTCCATGTATaGAAGGGGGACTTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLAVHV*KGDLAH
Trigger: GTGAGCCAAGTCCCCCTTCCATACATGGACAGCCAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAAGTGAAATTGTCACTTaGAGAAGAGCTTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVSEIVT*RRACPL
Trigger: GAGCGGGCAAGCTCTTCTTCAAGTGACAATTTCACT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTGGCATCTGTCGCTTaGCAGCGATATATCCCTGCA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLASVA*QRYIPA
Trigger: TGCAGGGATATATCGCTGTCAAGCGACAGATGCCAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTGGCTCTTTTCCATGTaGTTTCTGGAACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYWLFSM*FLEQAP
Trigger: GGGAGCCTGTTCCAGAAATCACATGGAAAAGAGCCA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTGGCTCTTTTCCATGTaGTTTCTGGAACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLWLFSM*FLEQAP
Trigger: GGGAGCCTGTTCCAGAAATCACATGGAAAAGAGCCA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAGGGATTCGGGTTTATTaGAAGAGATCTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVGIRVY*KRSWLW
Trigger: CCACAGCCAAGATCTCTTTCAATAAACCCGAATCCC...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCGCACATTCTCCTGGTaGTGCACATTAGTAACCCAC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLRTFSW*CTLVTH
Trigger: GTGGGTTACTAATGTGCATCACCAGGAGAATGTGCG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAACAGGCTCCCCTTCTaGTTCACATACGAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLNRLPF*FTYECD
Trigger: GTCACACTCGTATGTGAAGCAGAAGGGGAGCCTGTT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAGTCTCCTTGACCTTTaGCATTCACTGCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLSLLDL*HSLLQP
Trigger: GGGTTGCAGCAGTGAATGGCAAAGGTCAAGGAGACT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCTTGTGTCTGTCCTTTaGCATCTGTCGCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYLVSVL*HLSLDS
Trigger: GCTGTCAAGCGACAGATGCCAAAGGACAGACACAAG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTTGTGTCTGTCCTTTaGCATCTGTCGCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLVSVL*HLSLDS
Trigger: GCTGTCAAGCGACAGATGCCAAAGGACAGACACAAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATGTGACTTCCTCATTGTaGTACAACCAGCTGACCGCA +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYVTSSL*YNQLTA
Trigger: TGCGGTCAGCTGGTTGTACCACAATGAGGAAGTCAC...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATTTCCATGTGATTTCTaGAACAGGCTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVFPCDF*NRLPFC
Trigger: GCAGAAGGGGAGCCTGTTCCAGAAATCACATGGAAA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATTCTCTCTTCTCCAGTaGATTGACGCAGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVFSLLQ*IDAGGF
Trigger: AAACCCACCTGCGTCAATCCACTGGAGAAGAGAGAA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATACTCTTGCCACTGCTTaGCTGTCCATGTATGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYTLATA*LSMYGR
Trigger: CCTTCCATACATGGACAGCCAAGCAGTGGCAAGAGT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTACTCTTGCCACTGCTTaGCTGTCCATGTATGGAAGG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLTLATA*LSMYGR
Trigger: CCTTCCATACATGGACAGCCAAGCAGTGGCAAGAGT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CAA 72 bp ATAGGCACAGATTTATATGTGTGTTCCTGTGTGTGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IGTDLYVCSCVC*CVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACACAAACACACACAGGAACACACATATAAATCTGTGCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAGTGAAATTGTCACTTaGAGAAGAGCTTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLSEIVT*RRACPL
Trigger: GAGCGGGCAAGCTCTTCTTCAAGTGACAATTTCACT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACATAACCCTCTGCGTTaGAATGATCTTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVHNPLR*NDLLSL
Trigger: CAAGGAGAGAAGATCATTTCAACGCAGAGGGTTATG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATAGGAAGGCCTGCTTTTaGTCTTCTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYRKACF*SSPALF
Trigger: AAACAAGGCAGGAGAAGATCAAAAGCAGGCCTTCCT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAGGAAGGCCTGCTTTTaGTCTTCTCCTGCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLRKACF*SSPALF
Trigger: AAACAAGGCAGGAGAAGATCAAAAGCAGGCCTTCCT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGGGATTCGGGTTTATTaGAAGAGATCTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLGIRVY*KRSWLW
Trigger: CCACAGCCAAGATCTCTTTCAATAAACCCGAATCCC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTCTGCAAACCACTTCTaGATCCTCCCCTTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYSANHF*ILPLLE
Trigger: TTCAAGCAAGGGGAGGATGCAGAAGTGGTTTGCAGA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTCTGCAAACCACTTCTaGATCCTCCCCTTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLSANHF*ILPLLE
Trigger: TTCAAGCAAGGGGAGGATGCAGAAGTGGTTTGCAGA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCCAACAGCATTCAGATaGCATGACTGGCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYPTAFR*HDWPPF
Trigger: AAATGGAGGCCAGTCATGGCATCTGAATGCTGTTGG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTTCCATGTGATTTCTaGAACAGGCTCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFPCDF*NRLPFC
Trigger: GCAGAAGGGGAGCCTGTTCCAGAAATCACATGGAAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTCTCTCTTCTCCAGTaGATTGACGCAGGTGGGTTT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFSLLQ*IDAGGF
Trigger: AAACCCACCTGCGTCAATCCACTGGAGAAGAGAGAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTTTACTTTTCCCACTaGAGCCACTCTTTTTCCCGC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLYFSH*SHSFSR
Trigger: GCGGGAAAAAGAGTGGCTCCAGTGGGAAAAGTAAAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAATGATCTTCTCTCCTTaGGGGTTATACCAGTCGATA +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVMIFSP*GLYQSI
Trigger: TATCGACTGGTATAACCCTCAAGGAGAGAAGATCAT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCATAACCCTCTGCGTTaGAATGATCTTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLHNPLR*NDLLSL
Trigger: CAAGGAGAGAAGATCATTTCAACGCAGAGGGTTATG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCATACGAGTGTGACATaGCCATTCTCAGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYHTSVT*PFSDVV
Trigger: GACAACATCTGAGAATGGTCATGTCACACTCGTATG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCATACGAGTGTGACATaGCCATTCTCAGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLHTSVT*PFSDVV
Trigger: GACAACATCTGAGAATGGTCATGTCACACTCGTATG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCTTCACATACGAGTGTaGCATGACCATTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYLHIRV*HDHSQM
Trigger: CATCTGAGAATGGTCATGTCACACTCGTATGTGAAG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTTCACATACGAGTGTaGCATGACCATTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLHIRV*HDHSQM
Trigger: CATCTGAGAATGGTCATGTCACACTCGTATGTGAAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACACCTTCAGAAAACATaGCTCCATCTATGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVHLQKT*LHLWLF
Trigger: AAAGAGCCATAGATGGAGTCATGTTTTCTGAAGGTG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACTGATGCCACTTCTTTaGCATCCACTTGATAGTGAT +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVLMPLL*HPLDSD
Trigger: ATCACTATCAAGTGGATGTCAAAGAAGTGGCATCAG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATATTGTTTGCAAGCACTaGAAACCGATTGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYIVCKH*KPIVGD
Trigger: ATCCCCGACAATCGGTTTGCAGTGCTTGCAAACAAT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTATTGTTTGCAAGCACTaGAAACCGATTGTCGGGGAT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLIVCKH*KPIVGD
Trigger: ATCCCCGACAATCGGTTTGCAGTGCTTGCAAACAAT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTTCACATCTCTAATGTaGAGTGAAGAGCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYFTSLM*SEERPC
Trigger: GCATGGACGCTCTTCACTGCACATTAGAGATGTGAA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTCACATCTCTAATGTaGAGTGAAGAGCGTCCATGC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFTSLM*SEERPC
Trigger: GCATGGACGCTCTTCACTGCACATTAGAGATGTGAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATATAATCTTCACTCCATaGGGACTAGAGGGGACATCT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYIIFTP*GLEGTS
Trigger: AGATGTCCCCTCTAGTCCCCATGGAGTGAAGATTAT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTATAATCTTCACTCCATaGGGACTAGAGGGGACATCT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLIIFTP*GLEGTS
Trigger: AGATGTCCCCTCTAGTCCCCATGGAGTGAAGATTAT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTATGATCTTCTCTCCTTaGGGGTTATACCAGTCGATA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLMIFSP*GLYQSI
Trigger: TATCGACTGGTATAACCCTCAAGGAGAGAAGATCAT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCACCTTCAGAAAACATaGCTCCATCTATGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLHLQKT*LHLWLF
Trigger: AAAGAGCCATAGATGGAGTCATGTTTTCTGAAGGTG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAATATCTCCCCGAATCTaGCAACTTCACATCTCTAAT +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVISPRI*QLHISN
Trigger: ATTAGAGATGTGAAGTTGTCAGATTCGGGGAGATAT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTGATGCCACTTCTTTaGCATCCACTTGATAGTGAT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLMPLL*HPLDSD
Trigger: ATCACTATCAAGTGGATGTCAAAGAAGTGGCATCAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACTTTTGATCTTCTCCTaGCTTGTTTGTTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: YLNTAASCFPLISTSFKVLLIFS*LVCCFA
Trigger: TGCAAAGCAACAAACAAGGCAGGAGAAGATCAAAAG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATATTGTCCACTGCAGATaGTCCAAGATAATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYIVHCR*SKIMWS
Trigger: AGACCACATTATCTTGGAGCATCTGCAGTGGACAAT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTATTGTCCACTGCAGATaGTCCAAGATAATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLIVHCR*SKIMWS
Trigger: AGACCACATTATCTTGGAGCATCTGCAGTGGACAAT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTTCAGATGCCATGACTaGCCTCCATTTTCACCTTTA +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYFRCHD*PPFSPL
Trigger: TAAAGGTGAAAATGGAGGCCAGTCATGGCATCTGAA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
3UTR CAA 72 bp TCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTaGTATTCTGATGCTTGCAAAAGAGAGGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: STSFKVMPKMAT*YSDACKREGMS
Trigger: TGACATTCCCTCTCTTTTGCAAGCATCAGAATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
3UTR CAA 72 bp GACTTTTCCCGAGAAATTAAGGTCAATGGAATAGTTTaGGTCATAGTGTCACTCCAAACCAAATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DFSREIKVNGIV*VIVSLQTKCSL
Trigger: CAAGGAGCATTTGGTTTGGAGTGACACTATGACCAAAACTATTCCATTGACCTTAATTTCTCGGGAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CAA 72 bp CTTCGTCTTAGTCTGAAAGCCCTCACAATAGTGTGTTaGCCCAAGATAAGATTTATAAACATGCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LRLSLKALTIVC*PKIRFINMQGF
Trigger: AAAGCCCTGCATGTTTATAAATCTTATCTTGGGCAAACACACTATTGTGAGGGCTTTCAGACTAAGACGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTATATCTCCCCGAATCTaGCAACTTCACATCTCTAAT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLISPRI*QLHISN
Trigger: ATTAGAGATGTGAAGTTGTCAGATTCGGGGAGATAT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCATCACAACTTATGTTaGTTGGATTTCCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYHHNLC*LDFLPK
Trigger: CTTGGGAAGGAAATCCAATCAACATAAGTTGTGATG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCATCACAACTTATGTTaGTTGGATTTCCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLHHNLC*LDFLPK
Trigger: CTTGGGAAGGAAATCCAATCAACATAAGTTGTGATG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTATTTTCCAGGTTTCTaGTGCCACTTCTTTGACATC +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYYFPGF*CHFFDI
Trigger: GATGTCAAAGAAGTGGCATCAGAAACCTGGAAAATA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTATTTTCCAGGTTTCTaGTGCCACTTCTTTGACATC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLYFPGF*CHFFDI
Trigger: GATGTCAAAGAAGTGGCATCAGAAACCTGGAAAATA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTTCTTCTCTAGCCACTaGTCTTCCTTGTCTTTACTT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYFFSSH*SSLSLL
Trigger: AAGTAAAGACAAGGAAGATCAGTGGCTAGAGAAGAA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTCTTCTCTAGCCACTaGTCTTCCTTGTCTTTACTT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFFSSH*SSLSLL
Trigger: AAGTAAAGACAAGGAAGATCAGTGGCTAGAGAAGAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTGCATCTTCTATGTTTaGATTGTAGATGGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYCIFYV*IVDGES
Trigger: CGACTCACCATCTACAATGCAAACATAGAAGATGCA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTGCATCTTCTATGTTTaGATTGTAGATGGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLCIFYV*IVDGES
Trigger: CGACTCACCATCTACAATGCAAACATAGAAGATGCA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTTTTGATCTTCTCCTaGCTTGTTTGTTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLLIFS*LVCCFA
Trigger: TGCAAAGCAACAAACAAGGCAGGAGAAGATCAAAAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATAATAATGTTGGGTTTTaGGGGCATGCTGAACTCATA +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYNNVGF*GHAELI
Trigger: TATGAGTTCAGCATGCCCCCAAAACCCAACATTATT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAATAATGTTGGGTTTTaGGGGCATGCTGAACTCATA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLNNVGF*GHAELI
Trigger: TATGAGTTCAGCATGCCCCCAAAACCCAACATTATT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGGACTCCCATCTTCATaGTTAGTGATTCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLGLPSS*LVILSS
Trigger: AGATGAAAGAATCACTAACCATGAAGATGGGAGTCC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTATTTGGCTCATTTACTaGACTCCCATCTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLIWLIY*TPIFMV
Trigger: AACCATGAAGATGGGAGTCCAGTAAATGAGCCAAAT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGTTCTGTTAGCGGTGTaGTTTCATTTGGCTCATTTA +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLVLLAV*FHLAHL
Trigger: TAAATGAGCCAAATGAAACCACACCGCTAACAGAAC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CAA 72 bp CAAGTAAAGATGGTTATATTTGTCTATATGGTGTGGTaGTATGTGCATGTGTGTGAGTGTTGGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QVKMVIFVYMVW*YVHVCECWCVC
Trigger: ACACACACACCAACACTCACACACATGCACATACAACCACACCATATAGACAAATATAACCATCTTTACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTCAAGAATATATTCCTaGAATCTTGTGCCTATACGG +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYSRIYS*NLVPIR
Trigger: CCGTATAGGCACAAGATTTCAGGAATATATTCTTGA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR TCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTCAAGAATATATTCCTaGAATCTTGTGCCTATACGG +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLSRIYS*NLVPIR
Trigger: CCGTATAGGCACAAGATTTCAGGAATATATTCTTGA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTATTTGGTTCCAGACTaGTCAAAACAACCATCGTTT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYYLVPD*SKQPSF
Trigger: AAACGATGGTTGTTTTGAGCAGTCTGGAACCAAATA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTATTTGGTTCCAGACTaGTCAAAACAACCATCGTTT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLYLVPD*SKQPSF
Trigger: AAACGATGGTTGTTTTGAGCAGTCTGGAACCAAATA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR GCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTATCTTTCAGGTAAGCTaGTTTTCCTTCTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLIFQVS*FSFFKF
Trigger: GAACTTGAAGAAGGAAAAGCAGCTTACCTGAAAGAT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTCATCTTCTTTAGACTaGATGATGTCATTGGACACT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLSSSLD*MMSLDT
Trigger: AGTGTCCAATGACATCATCCAGTCTAAAGAAGATGA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CAA 72 bp AGACATCATCAAAACGCTACTCCCGACATATGCATATaGATGGTCACAAATGTGGTTTTTGTTACTCATAAG +
Preference number: 4 (lower is better)
Translates to: RHHQNATPDICI*MVTNVVFVTHK
Trigger: CTTATGAGTAACAAAAACCACATTTGTGACCATCAATATGCATATGTCGGGAGTAGCGTTTTGATGATGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CCA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCATCATGATTGCTGGTaGAACGTTAACAATAACAAT +
Preference number: 4 (lower is better)
Translates to: FPLISTSFKVMPKMATLYHHDCW*NVNNNN
Trigger: ATTGTTATTGTTAACGTTCCACCAGCAATCATGATG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CCA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCATCATGATTGCTGGTaGAACGTTAACAATAACAAT +
Preference number: 4 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLHHDCW*NVNNNN
Trigger: ATTGTTATTGTTAACGTTCCACCAGCAATCATGATG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
3UTR CAA 72 bp TTCAAGGACAATATTGGTTCAGCATCTCCTAGACAATaGATACCATGTATGGAATCTATCCAAAGTTACCTA +
Preference number: 4 (lower is better)
Translates to: FKDNIGSASPRQ*IPCMESIQSYL
Trigger: TAGGTAACTTTGGATAGATTCCATACATGGTATCAATTGTCTAGGAGATGCTGAACCAATATTGTCCTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS GCA 90 bp ACAAACTTAGGAGCATATTCGATGTCCAGGTGCATGCTCCTCTGGTaGCCACCAATCCGACTAGCGGCCTCACAGTCATATCTCCCCGAA +
Preference number: 5 (lower is better)
Translates to: TNLGAYSMSRCMLLW*PPIRLAASQSYLPE
Trigger: TTCGGGGAGATATGACTGTGAGGCCGCTAGTCGGATTGGTGGGCACCAGAGGAGCATGCACCTGGACATCGAATATGCTCCTAAGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CCA 90 bp GAAACAAACTTAGGAGCATATTCGATGTCCAGGTGCATGCTCCTCTaGTGCCCACCAATCCGACTAGCGGCCTCACAGTCATATCTCCCC +
Preference number: 5 (lower is better)
Translates to: ETNLGAYSMSRCMLL*CPPIRLAASQSYLP
Trigger: GGGGAGATATGACTGTGAGGCCGCTAGTCGGATTGGTGGGCACCAGAGGAGCATGCACCTGGACATCGAATATGCTCCTAAGTTTGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 90 bp TCTGACAACTTCACATCTCTAATGTGCAGTGAAGAGCGTCCATGCTaGCCTTTAACTTCGATGCGGCCATCCGGACTCTTATCACCTTCA +
Preference number: 5 (lower is better)
Translates to: SDNFTSLMCSEERPC*PLTSMRPSGLLSPS
Trigger: TGAAGGTGATAAGAGTCCGGATGGCCGCATCGAAGTTAAAGGGCAGCATGGACGCTCTTCACTGCACATTAGAGATGTGAAGTTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 90 bp GAATCTGACAACTTCACATCTCTAATGTGCAGTGAAGAGCGTCCATaGTGCCCTTTAACTTCGATGCGGCCATCCGGACTCTTATCACCT +
Preference number: 5 (lower is better)
Translates to: ESDNFTSLMCSEERP*CPLTSMRPSGLLSP
Trigger: AGGTGATAAGAGTCCGGATGGCCGCATCGAAGTTAAAGGGCAGCATGGACGCTCTTCACTGCACATTAGAGATGTGAAGTTGTCAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 90 bp TCACAGTCATATCTCCCCGAATCTGACAACTTCACATCTCTAATGTaGAGTGAAGAGCGTCCATGCTGCCCTTTAACTTCGATGCGGCCA +
Preference number: 5 (lower is better)
Translates to: SQSYLPESDNFTSLM*SEERPCCPLTSMRP
Trigger: TGGCCGCATCGAAGTTAAAGGGCAGCATGGACGCTCTTCACTGCACATTAGAGATGTGAAGTTGTCAGATTCGGGGAGATATGACTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS TCA 90 bp TCCATGGGATTCGGGTTTATTGAAAGAGATCTTGGCTGTGGTCTGTaGCAGCTCTATAATCTTCACTCCATGGGGACTAGAGGGGACATC +
Preference number: 5 (lower is better)
Translates to: SMGFGFIERDLGCGL*QLYNLHSMGTRGDI
Trigger: GATGTCCCCTCTAGTCCCCATGGAGTGAAGATTATAGAGCTGTCACAGACCACAGCCAAGATCTCTTTCAATAAACCCGAATCCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS TCA 90 bp TCCTTCTGTAGCATAACCCTCTGCGTTGAAATGATCTTCTCTCCTTaGGGGTTATACCAGTCGATACTCTCAGGCTCACCAATGGCTGTA +
Preference number: 5 (lower is better)
Translates to: SFCSITLCVEMIFSP*GLYQSILSGSPMAV
Trigger: TACAGCCATTGGTGAGCCTGAGAGTATCGACTGGTATAACCCTCAAGGAGAGAAGATCATTTCAACGCAGAGGGTTATGCTACAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 90 bp AGGCTGTACAAAGACTTGAAGGAAGGCCTGCTTTTGATCTTCTCCTaGCTTGTTTGTTGCTTTGCAGACATAAGAGCCCCCGTCTTTATT +
Preference number: 5 (lower is better)
Translates to: RLYKDLKEGLLLIFS*LVCCFADIRAPVFI
Trigger: AATAAAGACGGGGGCTCTTATGTCTGCAAAGCAACAAACAAGGCAGGAGAAGATCAAAAGCAGGCCTTCCTTCAAGTCTTTGTACAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 90 bp ATCTATGGCTCTTTTCCATGTGATTTCTGGAACAGGCTCCCCTTCTaGTTCACATACGAGTGTGACATGACCATTCTCAGATGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: IYGSFPCDFWNRLPF*FTYECDMTILRCCL
Trigger: GAGACAACATCTGAGAATGGTCATGTCACACTCGTATGTGAAGCAGAAGGGGAGCCTGTTCCAGAAATCACATGGAAAAGAGCCATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAGTGGTGACTTCCTCATaGTGGTACAACCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVVVTSS*WYNQLT
Trigger: GGTCAGCTGGTTGTACCACAATGAGGAAGTCACCAC...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATTTGGCATCTGTCGCTaGACAGCGATATATCCCTGC +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVFGICR*TAIYPC
Trigger: GCAGGGATATATCGCTGTCAAGCGACAGATGCCAAA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCCCTTGCTTGAACTCTaGAGGGGACACCACTTCTCT +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYPLLEL*RGHHFS
Trigger: AGAGAAGTGGTGTCCCCTCAAGAGTTCAAGCAAGGG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCCCTTGCTTGAACTCTaGAGGGGACACCACTTCTCT +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLPLLEL*RGHHFS
Trigger: AGAGAAGTGGTGTCCCCTCAAGAGTTCAAGCAAGGG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTTCTGCATCCTCCCCTaGCTTGAACTCTTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYFCILP*LELLRG
Trigger: TCCCCTCAAGAGTTCAAGCAAGGGGAGGATGCAGAA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTCTGCATCCTCCCCTaGCTTGAACTCTTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFCILP*LELLRG
Trigger: TCCCCTCAAGAGTTCAAGCAAGGGGAGGATGCAGAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGTGGTGACTTCCTCATaGTGGTACAACCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLVVTSS*WYNQLT
Trigger: GGTCAGCTGGTTGTACCACAATGAGGAAGTCACCAC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCTCTCTGCTGTAGCATaGAAGGACTTCTGGGGCATC +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYLSAVA*KDFWGI
Trigger: GATGCCCCAGAAGTCCTTCAATGCTACAGCAGAGAG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTCTCTGCTGTAGCATaGAAGGACTTCTGGGGCATC +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLSAVA*KDFWGI
Trigger: GATGCCCCAGAAGTCCTTCAATGCTACAGCAGAGAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAAACTCTTGCCACTGCTaGGCTGTCCATGTATGGAAG +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVNSCHC*AVHVWK
Trigger: CTTCCATACATGGACAGCCAAGCAGTGGCAAGAGTT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAGTTGGCAGCTGTGATTaGCACTTCGTAGCCCATTGT +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVVGSCD*HFVAHC
Trigger: ACAATGGGCTACGAAGTGCAAATCACAGCTGCCAAC...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS TCA 90 bp TATACGGTTAGTAGCTGTGCAGTTATATCGTCCAAAGTCATTGTCTaGTGTGGGGGCAATCTCGAGTATCATCTTTCTTCCTACACTGTG +
Preference number: 5 (lower is better)
Translates to: YTVSSCAVISSKVIV*CGGNLEYHLSSYTV
Trigger: CACAGTGTAGGAAGAAAGATGATACTCGAGATTGCCCCCACATCAGACAATGACTTTGGACGATATAACTGCACAGCTACTAACCGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS TCA 90 bp AACCATCGTTTGAACTCCATGGGAGCGTACTATTTTCCAGGTTTCTaGTGCCACTTCTTTGACATCCACTTGATAGTGATGAATAGGCAC +
Preference number: 5 (lower is better)
Translates to: NHRLNSMGAYYFPGF*CHFFDIHLIVMNRH
Trigger: GTGCCTATTCATCACTATCAAGTGGATGTCAAAGAAGTGGCATCAGAAACCTGGAAAATAGTACGCTCCCATGGAGTTCAAACGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CCA 90 bp AAGGTCATCTCTTCTCCTCTCTCTGCTGTAGCATTGAAGGACTTCTaGGGCATCATGATTGCTGGTGGAACGTTAACAATAACAATGATA +
Preference number: 5 (lower is better)
Translates to: KVISSPLSAVALKDF*GIMIAGGTLTITMI
Trigger: TATCATTGTTATTGTTAACGTTCCACCAGCAATCATGATGCCCCAGAAGTCCTTCAATGCTACAGCAGAGAGAGGAGAAGAGATGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTTGGCATCTGTCGCTaGACAGCGATATATCCCTGC +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFGICR*TAIYPC
Trigger: GCAGGGATATATCGCTGTCAAGCGACAGATGCCAAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAGAGCCCCCGTCTTTATaGATTATGTTCCTGACAGTG +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVEPPSL*IMFLTV
Trigger: CACTGTCAGGAACATAATCAATAAAGACGGGGGCTC...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAAGGCTGTACAAAGACTaGAAGGAAGGCCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVRLYKD*KEGLLL
Trigger: CAAAAGCAGGCCTTCCTTCAAGTCTTTGTACAGCCT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATTGACGCAGGTGGGTTaGCTGTCACATCACAACTTA +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVLTQVG*LSHHNL
Trigger: TAAGTTGTGATGTGACAGCAAACCCACCTGCGTCAA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATATCGTCCAAAGTCATaGTCTGATGTGGGGGCAATC +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVYRPKS*SDVGAI
Trigger: GATTGCCCCCACATCAGACAATGACTTTGGACGATA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAACTCTTGCCACTGCTaGGCTGTCCATGTATGGAAG +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLNSCHC*AVHVWK
Trigger: CTTCCATACATGGACAGCCAAGCAGTGGCAAGAGTT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGTTGGCAGCTGTGATTaGCACTTCGTAGCCCATTGT +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLVGSCD*HFVAHC
Trigger: ACAATGGGCTACGAAGTGCAAATCACAGCTGCCAAC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGCGGTGTGGTTTCATTaGGCTCATTTACTGGACTCC +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLAVWFH*AHLLDS
Trigger: GGAGTCCAGTAAATGAGCCAAATGAAACCACACCGC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS TCA 90 bp CCATGGGGACTAGAGGGGACATCTGCTAATTCAAGAATATATTCCTaGAATCTTGTGCCTATACGGTTAGTAGCTGTGCAGTTATATCGT +
Preference number: 5 (lower is better)
Translates to: PWGLEGTSANSRIYS*NLVPIRLVAVQLYR
Trigger: ACGATATAACTGCACAGCTACTAACCGTATAGGCACAAGATTTCAGGAATATATTCTTGAATTAGCAGATGTCCCCTCTAGTCCCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 90 bp ACCTTCATCACTTTTATTGATATTGAGGATCTGCAAATTATTGTTTaGAAGCACTGCAAACCGATTGTCGGGGATGGTGGTGACTTCCTC +
Preference number: 5 (lower is better)
Translates to: TFITFIDIEDLQIIV*KHCKPIVGDGGDFL
Trigger: GAGGAAGTCACCACCATCCCCGACAATCGGTTTGCAGTGCTTGCAAACAATAATTTGCAGATCCTCAATATCAATAAAAGTGATGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAAACTACTGTAGCTTCTaGTGTCTGTCCTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVNYCSF*CLSFGI
Trigger: GATGCCAAAGGACAGACACAAGAAGCTACAGTAGTT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGAGCCCCCGTCTTTATaGATTATGTTCCTGACAGTG +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLEPPSL*IMFLTV
Trigger: CACTGTCAGGAACATAATCAATAAAGACGGGGGCTC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACTTCTCCTGCCTTGTTaGTTGCTTTGCAGACATAAG +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVLLLPC*LLCRHK
Trigger: CTTATGTCTGCAAAGCAACAAACAAGGCAGGAGAAG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATAAGGAAGGCCTGCTTTaGATCTTCTCCTGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYKEGLL*IFSCLV
Trigger: AACAAGGCAGGAGAAGATCAAAAGCAGGCCTTCCTT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAAGGAAGGCCTGCTTTaGATCTTCTCCTGCCTTGTT +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLKEGLL*IFSCLV
Trigger: AACAAGGCAGGAGAAGATCAAAAGCAGGCCTTCCTT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAGGCTGTACAAAGACTaGAAGGAAGGCCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLRLYKD*KEGLLL
Trigger: CAAAAGCAGGCCTTCCTTCAAGTCTTTGTACAGCCT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTGACGCAGGTGGGTTaGCTGTCACATCACAACTTA +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLTQVG*LSHHNL
Trigger: TAAGTTGTGATGTGACAGCAAACCCACCTGCGTCAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTATCGTCCAAAGTCATaGTCTGATGTGGGGGCAATC +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLYRPKS*SDVGAI
Trigger: GATTGCCCCCACATCAGACAATGACTTTGGACGATA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATCAAAACAACCATCGTTaGAACTCCATGGGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYQNNHR*NSMGAY
Trigger: GTACGCTCCCATGGAGTTCAAACGATGGTTGTTTTG...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCAAAACAACCATCGTTaGAACTCCATGGGAGCGTAC +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLQNNHR*NSMGAY
Trigger: GTACGCTCCCATGGAGTTCAAACGATGGTTGTTTTG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATTTACTGTAGTCTCCTaGACCTTTGCCATTCACTGC +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVFTVVS*TFAIHC
Trigger: GCAGTGAATGGCAAAGGTCAAGGAGACTACAGTAAA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACTGATTTTAAAACTCTaGCCACTGCTTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVLILKL*PLLGCP
Trigger: TGGACAGCCAAGCAGTGGCAAGAGTTTTAAAATCAG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATAGCCCCTCCATCATCTaGCTTGGTGATGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYSPSII*LGDADF
Trigger: AAAATCAGCATCACCAAGCAAGATGATGGAGGGGCT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTAGCCCCTCCATCATCTaGCTTGGTGATGCTGATTTT +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLSPSII*LGDADF
Trigger: AAAATCAGCATCACCAAGCAAGATGATGGAGGGGCT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATGAATATCCCAGTCTGTaGGCAGCTGTGATTTGCACT +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYEYPSL*AAVICT
Trigger: AGTGCAAATCACAGCTGCCAACAGACTGGGATATTC...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGAATATCCCAGTCTGTaGGCAGCTGTGATTTGCACT +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLEYPSL*AAVICT
Trigger: AGTGCAAATCACAGCTGCCAACAGACTGGGATATTC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS GCA 90 bp GACAAACTCATGGTTATTACAAAAGTAAACCCAACAGCATTCAGATaGCATGACTGGCCTCCATTTTCACCTTTATTCGCTTCACAGCAA +
Preference number: 5 (lower is better)
Translates to: DKLMVITKVNPTAFR*HDWPPFSPLFASQQ
Trigger: TTGCTGTGAAGCGAATAAAGGTGAAAATGGAGGCCAGTCATGGCATCTGAATGCTGTTGGGTTTACTTTTGTAATAACCATGAGTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTTCTCCTGCCTTGTTaGTTGCTTTGCAGACATAAG +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLLLPC*LLCRHK
Trigger: CTTATGTCTGCAAAGCAACAAACAAGGCAGGAGAAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTTACTGTAGTCTCCTaGACCTTTGCCATTCACTGC +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFTVVS*TFAIHC
Trigger: GCAGTGAATGGCAAAGGTCAAGGAGACTACAGTAAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCTGATTTTAAAACTCTaGCCACTGCTTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLLILKL*PLLGCP
Trigger: TGGACAGCCAAGCAGTGGCAAGAGTTTTAAAATCAG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTGTGTCTTTAATAATGTaGGGTTTTGGGGGCATGCTG +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLVSLIM*GFGGML
Trigger: CAGCATGCCCCCAAAACCCAACATTATTAAAGACAC...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS TCA 90 bp AGTGGATTGACGCAGGTGGGTTTGCTGTCACATCACAACTTATGTTaGTTGGATTTCCTTCCCAAGAGTAATACATTGTCTGATTTGAAA +
Preference number: 5 (lower is better)
Translates to: SGLTQVGLLSHHNLC*LDFLPKSNTLSDLK
Trigger: TTTCAAATCAGACAATGTATTACTCTTGGGAAGGAAATCCAATCAACATAAGTTGTGATGTGACAGCAAACCCACCTGCGTCAATCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 90 bp TATTTCTATTTTACTGTAGTCTCCTTGACCTTTGCCATTCACTGCTaGAACCCTAATTTCGTAAGTCGTATTTGGTTCCAGACTGCTCAA +
Preference number: 5 (lower is better)
Translates to: YFYFTVVSLTFAIHC*NPNFVSRIWFQTAQ
Trigger: TTGAGCAGTCTGGAACCAAATACGACTTACGAAATTAGGGTTGCAGCAGTGAATGGCAAAGGTCAAGGAGACTACAGTAAAATAGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 90 bp GAATATTTCTATTTTACTGTAGTCTCCTTGACCTTTGCCATTCACTaGTGCAACCCTAATTTCGTAAGTCGTATTTGGTTCCAGACTGCT +
Preference number: 5 (lower is better)
Translates to: EYFYFTVVSLTFAIH*CNPNFVSRIWFQTA
Trigger: AGCAGTCTGGAACCAAATACGACTTACGAAATTAGGGTTGCAGCAGTGAATGGCAAAGGTCAAGGAGACTACAGTAAAATAGAAATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTTTTCTTCAATGAGTTaGCCGTTCCTGAACCAAGAG +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYFSSMS*PFLNQE
Trigger: CTCTTGGTTCAGGAACGGCAAACTCATTGAAGAAAA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTTTCTTCAATGAGTTaGCCGTTCCTGAACCAAGAG +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFSSMS*PFLNQE
Trigger: CTCTTGGTTCAGGAACGGCAAACTCATTGAAGAAAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTATTCTTTGACATCCACTaGATAGTGATGAATAGGCAC +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVFFDIH*IVMNRH
Trigger: GTGCCTATTCATCACTATCAAGTGGATGTCAAAGAA...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTACCTCCATCATCTTGCTaGGTGATGCTGATTTTAAAA +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVPPSSC*VMLILK
Trigger: TTTTAAAATCAGCATCACCAAGCAAGATGATGGAGG...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCCACTATCGGTTCTTTaGATCCATCTTTCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLPLSVL*IHLSGK
Trigger: CTTACCTGAAAGATGGATCAAAAGAACCGATAGTGG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TATCTGAATACAGCAGCCTCTTGTTTCCCTCTCATTTCCACCTCCTTTAAAGTAACACTAAGCTCTACTTaGCTAAGTGAAATTGTCACT +
Preference number: 5 (lower is better)
Translates to: YLNTAASCFPLISTSFKVTLSST*LSEIVT
Trigger: AGTGACAATTTCACTTAGCAAAGTAGAGCTTAGTGT...TACTTTAAAGGAGGTGGAAATGAGAGGGAAACAAGAGGCTGCTGTATTCAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATTCTGCAAATTATTGTTaGCAAGCACTGCAAACCGAT +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYSANYC*QALQTD
Trigger: ATCGGTTTGCAGTGCTTGCAAACAATAATTTGCAGA...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTCTGCAAATTATTGTTaGCAAGCACTGCAAACCGAT +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLSANYC*QALQTD
Trigger: ATCGGTTTGCAGTGCTTGCAAACAATAATTTGCAGA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTTTCTTTGACATCCACTaGATAGTGATGAATAGGCAC +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLFFDIH*IVMNRH
Trigger: GTGCCTATTCATCACTATCAAGTGGATGTCAAAGAA...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTCCTCCATCATCTTGCTaGGTGATGCTGATTTTAAAA +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLPPSSC*VMLILK
Trigger: TTTTAAAATCAGCATCACCAAGCAAGATGATGGAGG...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS CCA 90 bp ATGGTTATTACAAAAGTAAACCCAACAGCATTCAGATGCCATGACTaGCCTCCATTTTCACCTTTATTCGCTTCACAGCAATTATCTTTA +
Preference number: 5 (lower is better)
Translates to: MVITKVNPTAFRCHD*PPFSPLFASQQLSL
Trigger: TAAAGATAATTGCTGTGAAGCGAATAAAGGTGAAAATGGAGGCCAGTCATGGCATCTGAATGCTGTTGGGTTTACTTTTGTAATAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTACACTAAGCTCTACTTaGCTAAGTGAAATTGTCACT +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLTLSST*LSEIVT
Trigger: AGTGACAATTTCACTTAGCAAAGTAGAGCTTAGTGT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS-3UTR CAA 90 bp TTCCCTCTCATTTCCACCTCCTTTAAAGTAATGCCTAAAATGGCCACTTTGTATACATCACAACTTATGTaGATTGGATTTCCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: FPLISTSFKVMPKMATLYTSQLM*IGFPSQ
Trigger: TTGGGAAGGAAATCCAATCAACATAAGTTGTGATGT...ATACAAAGTGGCCATTTTAGGCATTACTTTAAAGGAGGTGGAAATGAGAGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037785.14
CDS-3UTR CAA 90 bp TTCCCTGAAATTCCCCTGATAAAAAGCATACCCTTTATTATGTGCCTTCGTCTTACATCACAACTTATGTaGATTGGATTTCCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: FPEIPLIKSIPFIMCLRLTSQLM*IGFPSQ
Trigger: TTGGGAAGGAAATCCAATCAACATAAGTTGTGATGT...AAGACGAAGGCACATAATAAAGGGTATGCTTTTTATCAGGGGAATTTCAGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5
CDS GCA 72 bp GGAGCATATTCGATGTCCAGGTGCATGCTCCTCTGGTaGCCACCAATCCGACTAGCGGCCTCACAGTCATAT +
Preference number: 6 (lower is better)
Translates to: GAYSMSRCMLLW*PPIRLAASQSY
Trigger: ATATGACTGTGAGGCCGCTAGTCGGATTGGTGGGCACCAGAGGAGCATGCACCTGGACATCGAATATGCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp ACCAAGAGATGGTTGGATCTGGGGAGCCCGAGGCCTTaGATGTTAAGGTCATCTCTTCTCCTCTCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: TKRWLDLGSPRP*MLRSSLLLSLL
Trigger: CAGCAGAGAGAGGAGAAGAGATGACCTTAACATGCAAGGCCTCGGGCTCCCCAGATCCAACCATCTCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp AACTTCACATCTCTAATGTGCAGTGAAGAGCGTCCATaGTGCCCTTTAACTTCGATGCGGCCATCCGGACTC +
Preference number: 6 (lower is better)
Translates to: NFTSLMCSEERP*CPLTSMRPSGL
Trigger: GAGTCCGGATGGCCGCATCGAAGTTAAAGGGCAGCATGGACGCTCTTCACTGCACATTAGAGATGTGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CAA 72 bp GTTAAGGTCATCTCTTCTCCTCTCTCTGCTGTAGCATaGAAGGACTTCTGGGGCATCATGATTGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: VKVISSPLSAVA*KDFWGIMIAGG
Trigger: TCCACCAGCAATCATGATGCCCCAGAAGTCCTTCAATGCTACAGCAGAGAGAGGAGAAGAGATGACCTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CAA 90 bp GCCTTGCATGTTAAGGTCATCTCTTCTCCTCTCTCTGCTGTAGCATaGAAGGACTTCTGGGGCATCATGATTGCTGGTGGAACGTTAACA +
Preference number: 6 (lower is better)
Translates to: ALHVKVISSPLSAVA*KDFWGIMIAGGTLT
Trigger: TGTTAACGTTCCACCAGCAATCATGATGCCCCAGAAGTCCTTCAATGCTACAGCAGAGAGAGGAGAAGAGATGACCTTAACATGCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS TCA 72 bp AGCATAACCCTCTGCGTTGAAATGATCTTCTCTCCTTaGGGGTTATACCAGTCGATACTCTCAGGCTCACCA +
Preference number: 6 (lower is better)
Translates to: SITLCVEMIFSP*GLYQSILSGSP
Trigger: TGGTGAGCCTGAGAGTATCGACTGGTATAACCCTCAAGGAGAGAAGATCATTTCAACGCAGAGGGTTATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp AAAGACTTGAAGGAAGGCCTGCTTTTGATCTTCTCCTaGCTTGTTTGTTGCTTTGCAGACATAAGAGCCCCC +
Preference number: 6 (lower is better)
Translates to: KDLKEGLLLIFS*LVCCFADIRAP
Trigger: GGGGGCTCTTATGTCTGCAAAGCAACAAACAAGGCAGGAGAAGATCAAAAGCAGGCCTTCCTTCAAGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp TATCTCCCCGAATCTGACAACTTCACATCTCTAATGTaGAGTGAAGAGCGTCCATGCTGCCCTTTAACTTCG +
Preference number: 6 (lower is better)
Translates to: YLPESDNFTSLM*SEERPCCPLTS
Trigger: CGAAGTTAAAGGGCAGCATGGACGCTCTTCACTGCACATTAGAGATGTGAAGTTGTCAGATTCGGGGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CCA 72 bp TTCTTAGCTGGTAAGAGCAGTTTCTCTCTTCTCCAGTaGATTGACGCAGGTGGGTTTGCTGTCACATCACAA +
Preference number: 6 (lower is better)
Translates to: FLAGKSSFSLLQ*IDAGGFAVTSQ
Trigger: TTGTGATGTGACAGCAAACCCACCTGCGTCAATCCACTGGAGAAGAGAGAAACTGCTCTTACCAGCTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS TCA 72 bp GTAGCTTCTTGTGTCTGTCCTTTGGCATCTGTCGCTTaGCAGCGATATATCCCTGCATCTTCTATGTTTGCA +
Preference number: 6 (lower is better)
Translates to: VASCVCPLASVA*QRYIPASSMFA
Trigger: TGCAAACATAGAAGATGCAGGGATATATCGCTGTCAAGCGACAGATGCCAAAGGACAGACACAAGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp GATATTGAGGATCTGCAAATTATTGTTTGCAAGCACTaGAAACCGATTGTCGGGGATGGTGGTGACTTCCTC +
Preference number: 6 (lower is better)
Translates to: DIEDLQIIVCKH*KPIVGDGGDFL
Trigger: GAGGAAGTCACCACCATCCCCGACAATCGGTTTGCAGTGCTTGCAAACAATAATTTGCAGATCCTCAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp GAAGGCCTGCTTTTGATCTTCTCCTGCCTTGTTTGTTaGTTTGCAGACATAAGAGCCCCCGTCTTTATTGAT +
Preference number: 6 (lower is better)
Translates to: EGLLLIFSCLVC*FADIRAPVFID
Trigger: ATCAATAAAGACGGGGGCTCTTATGTCTGCAAAGCAACAAACAAGGCAGGAGAAGATCAAAAGCAGGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp TCTTTTCCATGTGATTTCTGGAACAGGCTCCCCTTCTaGTTCACATACGAGTGTGACATGACCATTCTCAGA +
Preference number: 6 (lower is better)
Translates to: SFPCDFWNRLPF*FTYECDMTILR
Trigger: TCTGAGAATGGTCATGTCACACTCGTATGTGAAGCAGAAGGGGAGCCTGTTCCAGAAATCACATGGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CCA 72 bp GCTGTGGTCTGTGACAGCTCTATAATCTTCACTCCATaGGGACTAGAGGGGACATCTGCTAATTCAAGAATA +
Preference number: 6 (lower is better)
Translates to: AVVCDSSIIFTP*GLEGTSANSRI
Trigger: TATTCTTGAATTAGCAGATGTCCCCTCTAGTCCCCATGGAGTGAAGATTATAGAGCTGTCACAGACCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CAA 72 bp TGTAGCTTCTTGTGTCTGTCCTTTGGCATCTGTCGCTaGACAGCGATATATCCCTGCATCTTCTATGTTTGC +
Preference number: 6 (lower is better)
Translates to: CSFLCLSFGICR*TAIYPCIFYVC
Trigger: GCAAACATAGAAGATGCAGGGATATATCGCTGTCAAGCGACAGATGCCAAAGGACAGACACAAGAAGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CAA 90 bp GTGCCTATACGGTTAGTAGCTGTGCAGTTATATCGTCCAAAGTCATaGTCTGATGTGGGGGCAATCTCGAGTATCATCTTTCTTCCTACA +
Preference number: 6 (lower is better)
Translates to: VPIRLVAVQLYRPKS*SDVGAISSIIFLPT
Trigger: TGTAGGAAGAAAGATGATACTCGAGATTGCCCCCACATCAGACAATGACTTTGGACGATATAACTGCACAGCTACTAACCGTATAGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS TCA 72 bp TTCGGGTTTATTGAAAGAGATCTTGGCTGTGGTCTGTaGCAGCTCTATAATCTTCACTCCATGGGGACTAGA +
Preference number: 6 (lower is better)
Translates to: FGFIERDLGCGL*QLYNLHSMGTR
Trigger: TCTAGTCCCCATGGAGTGAAGATTATAGAGCTGTCACAGACCACAGCCAAGATCTCTTTCAATAAACCCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp TGCTGTAGCATTGAAGGACTTCTGGGGCATCATGATTaGTGGTGGAACGTTAACAATAACAATGATATCCCG +
Preference number: 6 (lower is better)
Translates to: CCSIEGLLGHHD*WWNVNNNNDIP
Trigger: CGGGATATCATTGTTATTGTTAACGTTCCACCAGCAATCATGATGCCCCAGAAGTCCTTCAATGCTACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CCA 72 bp AGCATTGAAGGACTTCTGGGGCATCATGATTGCTGGTaGAACGTTAACAATAACAATGATATCCCGGAAGTC +
Preference number: 6 (lower is better)
Translates to: SIEGLLGHHDCW*NVNNNNDIPEV
Trigger: GACTTCCGGGATATCATTGTTATTGTTAACGTTCCACCAGCAATCATGATGCCCCAGAAGTCCTTCAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CAA 72 bp CGGTTAGTAGCTGTGCAGTTATATCGTCCAAAGTCATaGTCTGATGTGGGGGCAATCTCGAGTATCATCTTT +
Preference number: 6 (lower is better)
Translates to: RLVAVQLYRPKS*SDVGAISSIIF
Trigger: AAAGATGATACTCGAGATTGCCCCCACATCAGACAATGACTTTGGACGATATAACTGCACAGCTACTAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CAA 72 bp ACACCTCCATGGGATTCGGGTTTATTGAAAGAGATCTaGGCTGTGGTCTGTGACAGCTCTATAATCTTCACT +
Preference number: 6 (lower is better)
Translates to: TPPWDSGLLKEI*AVVCDSSIIFT
Trigger: AGTGAAGATTATAGAGCTGTCACAGACCACAGCCAAGATCTCTTTCAATAAACCCGAATCCCATGGAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CAA 90 bp ACGGACTGGCAGTGTCTGGAATATTTCTATTTTACTGTAGTCTCCTaGACCTTTGCCATTCACTGCTGCAACCCTAATTTCGTAAGTCGT +
Preference number: 6 (lower is better)
Translates to: TDWQCLEYFYFTVVS*TFAIHCCNPNFVSR
Trigger: ACGACTTACGAAATTAGGGTTGCAGCAGTGAATGGCAAAGGTCAAGGAGACTACAGTAAAATAGAAATATTCCAGACACTGCCAGTCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS TCA 72 bp ACAGGCTCCCCTTCTGCTTCACATACGAGTGTGACATaGCCATTCTCAGATGTTGTCTCATTTTTAAGTTGT +
Preference number: 6 (lower is better)
Translates to: TGSPSASHTSVT*PFSDVVSFLSC
Trigger: ACAACTTAAAAATGAGACAACATCTGAGAATGGTCATGTCACACTCGTATGTGAAGCAGAAGGGGAGCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp TTTACTGTAGTCTCCTTGACCTTTGCCATTCACTGCTaGAACCCTAATTTCGTAAGTCGTATTTGGTTCCAG +
Preference number: 6 (lower is better)
Translates to: FTVVSLTFAIHC*NPNFVSRIWFQ
Trigger: CTGGAACCAAATACGACTTACGAAATTAGGGTTGCAGCAGTGAATGGCAAAGGTCAAGGAGACTACAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CCA 72 bp TGTAGCATTGAAGGACTTCTGGGGCATCATGATTGCTaGTGGAACGTTAACAATAACAATGATATCCCGGAA +
Preference number: 6 (lower is better)
Translates to: CSIEGLLGHHDC*WNVNNNNDIPE
Trigger: TTCCGGGATATCATTGTTATTGTTAACGTTCCACCAGCAATCATGATGCCCCAGAAGTCCTTCAATGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CAA 90 bp CAAAACTACTGTAGCTTCTTGTGTCTGTCCTTTGGCATCTGTCGCTaGACAGCGATATATCCCTGCATCTTCTATGTTTGCATTGTAGAT +
Preference number: 6 (lower is better)
Translates to: QNYCSFLCLSFGICR*TAIYPCIFYVCIVD
Trigger: ATCTACAATGCAAACATAGAAGATGCAGGGATATATCGCTGTCAAGCGACAGATGCCAAAGGACAGACACAAGAAGCTACAGTAGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS TCA 72 bp ACGCAGGTGGGTTTGCTGTCACATCACAACTTATGTTaGTTGGATTTCCTTCCCAAGAGTAATACATTGTCT +
Preference number: 6 (lower is better)
Translates to: TQVGLLSHHNLC*LDFLPKSNTLS
Trigger: AGACAATGTATTACTCTTGGGAAGGAAATCCAATCAACATAAGTTGTGATGTGACAGCAAACCCACCTGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS GCA 72 bp TATTTTACTGTAGTCTCCTTGACCTTTGCCATTCACTaGTGCAACCCTAATTTCGTAAGTCGTATTTGGTTC +
Preference number: 6 (lower is better)
Translates to: YFTVVSLTFAIH*CNPNFVSRIWF
Trigger: GAACCAAATACGACTTACGAAATTAGGGTTGCAGCAGTGAATGGCAAAGGTCAAGGAGACTACAGTAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037785.14
ENSMUST00000067602.5
CDS CCA 72 bp CTTTTAAAGGCAATTTTTCAGGTTCTGTTAGCGGTGTaGTTTCATTTGGCTCATTTACTGGACTCCCATCTT +
Preference number: 6 (lower is better)
Translates to: LLKAIFQVLLAV*FHLAHLLDSHL
Trigger: AAGATGGGAGTCCAGTAAATGAGCCAAATGAAACCACACCGCTAACAGAACCTGAAAAATTGCCTTTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067602.5