RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NBR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000017119

Ensembl transcript IDs: ENSMUST00000071537.13, ENSMUST00000103098.9, ENSMUST00000103099.8, ENSMUST00000107208.8, ENSMUST00000107212.8, ENSMUST00000107213.8, ENSMUST00000107218.10, ENSMUST00000123558.8, ENSMUST00000136185.2, ENSMUST00000149019.2

Found 882 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTTACTCGCTTCCACGGACTACAGCGGCGAGAGTTCTGTCCAGCTaGGTTGAAAACTGTCTTCCTACCATTCATCCCATTTCTACAGTG +
Preference number: 1 (lower is better)
Translates to: SYSLPRTTAARVLSS*VENCLPTIHPISTV
Trigger: CACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCGCTGTAGTCCGTGGAAGCGAGTAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CCA 90 bp AATTTATGCAAAATTACTTTGACAGACACTGCTCAGTGGGTGCTGTaGGTTAACCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGC +
Preference number: 1 (lower is better)
Translates to: NLCKITLTDTAQWVL*VNPNASCPSRFLLG
Trigger: GCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGGTTAACCCACAGCACCCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR TCA 90 bp CTCGCTTCCACGGACTACAGCGGCGAGAGTTCTGTCCAGCTGAGTTaGAAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAAT +
Preference number: 1 (lower is better)
Translates to: LASTDYSGESSVQLS*KLSSYHSSHFYSEN
Trigger: ATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCGCTGTAGTCCGTGGAAGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR GCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATaGTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACT +
Preference number: 1 (lower is better)
Translates to: VLSPTPDLTEMSICT*LSFQSTVTVSKRTT
Trigger: AGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CCA 90 bp CAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTaGGTTAGCCCCAAAGCATTACTTCCTGTTCTCGGCTTTCTAGGG +
Preference number: 1 (lower is better)
Translates to: QSLLPIYSNGKLTFL*VSPKALLPVLGFLG
Trigger: CCCTAGAAAGCCGAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAGGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCGATGGGCTGTGCAGTaGCTGGTGGCCCAGAAAACA +
Preference number: 2 (lower is better)
Translates to: PECLLSFQVPARPSESKVRWAVQ*LVAQKT
Trigger: TGTTTTCTGGGCCACCAGTCACTGCACAGCCCATCG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
3UTR-3UTR CCA 90 bp CTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAGGAGCTCTGTCAGGGCTGTGCAGTGACTaGTGGCCCAGAAAACAGGGC +
Preference number: 2 (lower is better)
Translates to: LNSGGCTSRCYSLEGALSGLCSD*WPRKQG
Trigger: GCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCC...TGACAGAGCTCCTTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
3UTR-3UTR GCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTAGCCTTAGGTTCAGCTaGCTGTCGCAGAATCCCATT +
Preference number: 2 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCSLRFS*LSQNPI
Trigger: AATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
3UTR-3UTR TCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATCCACCCACACTCAATaGCAGCAGAGAGACCACCTC +
Preference number: 2 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTSTHTQ*QQRDHL
Trigger: GAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCCCTTCCAATCCACTGTaGCAGTCAGTAAAAGGACGA +
Preference number: 2 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSPSNPL*QSVKGR
Trigger: TCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGG...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAACTGTGCAGTGACTGGTaGCCCAGAAAACAGGGCCTT +
Preference number: 2 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLELCSDW*PRKQGL
Trigger: AAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
3UTR-3UTR TCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTTATGCAAAATTACTTTaGCAGACACTGCTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCYAKLL*QTLLSG
Trigger: CCCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATA...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTCCACCCACACTCAATaGCAGCAGAGAGACCACCTC +
Preference number: 2 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLSTHTQ*QQRDHL
Trigger: GAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CAA 90 bp CTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTaGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACT +
Preference number: 2 (lower is better)
Translates to: LSPTPDLTEMSICTC*SFQSTVTVSKRTTT
Trigger: AGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTCCACCCACACTCAATaGCAGCAGAGAGACCACCTC +
Preference number: 2 (lower is better)
Translates to: RPSESKVFLISKSLRNMTSTHTQ*QQRDHL
Trigger: GAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGAGTTCTGTCCAGCTaGGTTGAAAACTGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTRVLSS*VENCLP
Trigger: AGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACTATGCAAAATTACTTTaGCAGACACTGCTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHYAKLL*QTLLSG
Trigger: CCCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATA...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCAAACTAACCTTTCTGTaGGTTAGCCCCAAAGCATTA +
Preference number: 2 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSKLTFL*VSPKAL
Trigger: TAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTT...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CAA 90 bp GGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTaGAAGGAGCTCTGTCACAACCTGCAGGATATTGTAATTGTGTTT +
Preference number: 2 (lower is better)
Translates to: GQSSIAVAVPVVVIH*KELCHNLQDIVIVF
Trigger: AAACACAATTACAATATCCTGCAGGTTGTGACAGAGCTCCTTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
3UTR-3UTR TCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACCCTTCCAATCCACTGTaGCAGTCAGTAAAAGGACGA +
Preference number: 2 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNPSNPL*QSVKGR
Trigger: TCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGG...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR GCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTATGACTTTCTTGATCTaGTGTCTTTATGTAGCTATG +
Preference number: 2 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCMTFLI*CLYVAM
Trigger: CATAGCTACATAAAGACAGCAGATCAAGAAAGTCAT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR GCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTACTTTGACAGACACTaGTCAGTGGGTGCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: ARPSESKVFLISKSLRNMYFDRH*SVGAVG
Trigger: ACCCACAGCACCCACTGAGCAGTGTCTGTCAAAGTA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCTCCACCCACACTCAATaGCAGCAGAGAGACCACCTC +
Preference number: 2 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGSTHTQ*QQRDHL
Trigger: GAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGA...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGTCCACCCACACTCAATaGCAGCAGAGAGACCACCTC +
Preference number: 2 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMSTHTQ*QQRDHL
Trigger: GAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGA...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCCCTTCCAATCCACTGTaGCAGTCAGTAAAAGGACGA +
Preference number: 2 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLPSNPL*QSVKGR
Trigger: TCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGG...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGCCGACCTTACTGAGATaGGTATTTGCACATGCTTGT +
Preference number: 2 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTPTLLR*VFAHAC
Trigger: ACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGG...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR GCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGAGAAACGATGGGCTGTaGAGTGACTGGTGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMRNDGL*SDWWPR
Trigger: TCTGGGCCACCAGTCACTGCACAGCCCATCGTTTCT...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
3UTR-3UTR TCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGAGAGTTCTGTCCAGCTaGGTTGAAAACTGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: ARPSESKVFLISKSLRNMRVLSS*VENCLP
Trigger: AGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCT...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACCCTTCCAATCCACTGTaGCAGTCAGTAAAAGGACGA +
Preference number: 2 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNPSNPL*QSVKGR
Trigger: TCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGG...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR GCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCATGACTTTCTTGATCTaGTGTCTTTATGTAGCTATG +
Preference number: 2 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSMTFLI*CLYVAM
Trigger: CATAGCTACATAAAGACAGCAGATCAAGAAAGTCAT...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGGGGCCATCAGGGCTGTaGTCTGATCTTCAGAAACGA +
Preference number: 2 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMGPSGL*SDLQKR
Trigger: TCGTTTCTGAAGATCAGACCACAGCCCTGATGGCCC...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
3UTR-3UTR TCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAATCCCATTTCTACAGTaGAAATTTAAGTTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLEIPFLQ*KFKFWP
Trigger: AGGCCAGAACTTAAATTTTCACTGTAGAAATGGGAT...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
3UTR-3UTR TCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTATGCAAAATTACTTTaGCAGACACTGCTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: ARPSESKVFLISKSLRNMYAKLL*QTLLSG
Trigger: CCCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CAA 90 bp CCTGCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTaGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATG +
Preference number: 2 (lower is better)
Translates to: PARPSESKVFLISKS*RNMTFLICCLYVAM
Trigger: CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGATCCCATTTCTACAGTaGAAATTTAAGTTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTIPFLQ*KFKFWP
Trigger: AGGCCAGAACTTAAATTTTCACTGTAGAAATGGGAT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTATGCAAAATTACTTTaGCAGACACTGCTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNYAKLL*QTLLSG
Trigger: CCCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATA...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR GCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTATGACTTTCTTGATCTaGTGTCTTTATGTAGCTATG +
Preference number: 2 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVMTFLI*CLYVAM
Trigger: CATAGCTACATAAAGACAGCAGATCAAGAAAGTCAT...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR TCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGATCCCATTTCTACAGTaGAAATTTAAGTTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMIPFLQ*KFKFWP
Trigger: AGGCCAGAACTTAAATTTTCACTGTAGAAATGGGAT...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGTAACAGGTACTGTTTaGACAATTCAGAGACATAGA +
Preference number: 3 (lower is better)
Translates to: QGLPPTLNDSRETTSERQVTGTV*TIQRHR
Trigger: TCTATGTCTCTGAATTGTCAAAACAGTACCTGTTAC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCTTCTGTCCAGCTGAGTaGAAAACTGTCTTCCTACCA +
Preference number: 3 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSFCPAE*KTVFLP
Trigger: TGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAA...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTTATGCAAAATTACTTaGACAGACACTGCTCAGTGG +
Preference number: 3 (lower is better)
Translates to: PECLLSFQVPARPSESKVLCKIT*TDTAQW
Trigger: CCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATAA...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR TCA 72 bp ACGGACTACAGCGGCGAGAGTTCTGTCCAGCTGAGTTaGAAACTGTCTTCCTACCATTCATCCCATTTCTAC +
Preference number: 3 (lower is better)
Translates to: TDYSGESSVQLS*KLSSYHSSHFY
Trigger: GTAGAAATGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCGCTGTAGTCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR TCA 72 bp GCAGTTCTGTGTCCTTTCACCCACACCCGACCTTACTaGGATGAGTATTTGCACATGCTTGTCCTTCCAATC +
Preference number: 3 (lower is better)
Translates to: AVLCPFTHTRPY*DEYLHMLVLPI
Trigger: GATTGGAAGGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGACACAGAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR GCA 72 bp CTTTCACCCACACCCGACCTTACTGAGATGAGTATTTaGACATGCTTGTCCTTCCAATCCACTGTGACAGTC +
Preference number: 3 (lower is better)
Translates to: LSPTPDLTEMSI*TCLSFQSTVTV
Trigger: GACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGGTAACAGGTACTGTTTaGACAATTCAGAGACATAGA +
Preference number: 3 (lower is better)
Translates to: PECLLSFQVPARPSESKVVTGTV*TIQRHR
Trigger: TCTATGTCTCTGAATTGTCAAAACAGTACCTGTTAC...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCTCATTTCTAAGTCTTaGAGGAACATGACTTTCTTG +
Preference number: 3 (lower is better)
Translates to: PECLLSFQVPARPSESKVLISKS*RNMTFL
Trigger: CAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTGTAACAGGTACTGTTTaGACAATTCAGAGACATAGA +
Preference number: 3 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCVTGTV*TIQRHR
Trigger: TCTATGTCTCTGAATTGTCAAAACAGTACCTGTTAC...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CCA 72 bp AATTTATGCAAAATTACTTTGACAGACACTGCTCAGTaGGTGCTGTGGGTTAACCCGAATGCCTCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: NLCKITLTDTAQ*VLWVNPNASCP
Trigger: AGGACAGGAGGCATTCGGGTTAACCCACAGCACCCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCGTAACAGGTACTGTTTaGACAATTCAGAGACATAGA +
Preference number: 3 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSVTGTV*TIQRHR
Trigger: TCTATGTCTCTGAATTGTCAAAACAGTACCTGTTAC...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCCTCATTTCTAAGTCTTaGAGGAACATGACTTTCTTG +
Preference number: 3 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSLISKS*RNMTFL
Trigger: CAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAG...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGAGTATTTGCACATGCTaGTCCTTCCAATCCACTGTG +
Preference number: 3 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTSICTC*SFQSTV
Trigger: CACAGTGGATTGGAAGGACAAGCATGTGCAAATACT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTTCTGTCCAGCTGAGTaGAAAACTGTCTTCCTACCA +
Preference number: 3 (lower is better)
Translates to: ARPSESKVFLISKSLRNMFCPAE*KTVFLP
Trigger: TGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACTTATGCAAAATTACTTaGACAGACACTGCTCAGTGG +
Preference number: 3 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNLCKIT*TDTAQW
Trigger: CCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATAA...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGTTATGCAAAATTACTTaGACAGACACTGCTCAGTGG +
Preference number: 3 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTLCKIT*TDTAQW
Trigger: CCACTGAGCAGTGTCTGTCAAAGTAATTTTGCATAA...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGTTCTGTCCAGCTGAGTaGAAAACTGTCTTCCTACCA +
Preference number: 3 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMFCPAE*KTVFLP
Trigger: TGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAA...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTTTCTGTCCAGCTGAGTaGAAAACTGTCTTCCTACCA +
Preference number: 3 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTFCPAE*KTVFLP
Trigger: TGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAA...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGTAACAGGTACTGTTTaGACAATTCAGAGACATAGA +
Preference number: 3 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKVTGTV*TIQRHR
Trigger: TCTATGTCTCTGAATTGTCAAAACAGTACCTGTTAC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR-3UTR CAA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACTCATTTCTAAGTCTTaGAGGAACATGACTTTCTTG +
Preference number: 3 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKLISKS*RNMTFL
Trigger: CAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCTCTGGGCTCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQLWALL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGGCGCAGAGCTGTACATaGAGTCCCCCAGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVAQSCT*SPPGGG
Trigger: GCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGC...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCGCTCCAGGCCTGGCTaGGAGAGCGCAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVRSRPG*ESAELY
Trigger: GTACAGCTCTGCGCTCTCCCAGCCAGGCCTGGAGCG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GATGGGCTGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCCCTGGACAATGCTGCTaGAAGTCCTGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: DGLCSDWWPRKQGLVRRGPGQCC*KSCHLG
Trigger: CCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGG...GCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCTCTGGGCTCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVLWALL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCTCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQLCGDL*LQGGLW
Trigger: CCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GATGGGCTGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAAGGACAGCAGGTCCTaGGCAGTCAGGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: DGLCSDWWPRKQGLVRRGKDSRS*AVRRST
Trigger: TGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTT...GCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTCCAGGCAGCACAAGTaGCTGCTGTCCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQSRQHK*LLSLGG
Trigger: TCCACCGAGGGACAGCAGCCACTTGTGCTGCCTGGA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCCCCCAGGGGGCGGCTaGTATCAAAGCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQPPGGG*YQSTQE
Trigger: TTCCTGAGTGCTTTGATACCAGCCGCCCCCTGGGGG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGCGCAGAGCTGTACATaGAGTCCCCCAGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLAQSCT*SPPGGG
Trigger: GCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCCTGGACAATGCTGCTaGAAGTCCTGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQPGQCC*KSCHLG
Trigger: CCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCGTGTCCAGAGGCTGTaGGGTTGTGAGGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQRVQRL*GCEDVA
Trigger: AGCGACATCCTCACAACCTCACAGCCTCTGGACACG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CTGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAGCAACCGTGTCCAGAGGCTGTaGGGTTGTGAGGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: LCSDWWPRKQGLVRRGSNRVQRL*GCEDVA
Trigger: AGCGACATCCTCACAACCTCACAGCCTCTGGACACG...GTTGCTGCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCTCTGGGCTCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVLWALL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGTTTGCGAGTCCTGTTaGGCCTCTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQVCESC*ASGLSS
Trigger: AGAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAAC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCGATGGGCTGTGCAGTaGCTGGTGGCCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQRWAVQ*LVAQKT
Trigger: TGTTTTCTGGGCCACCAGTCACTGCACAGCCCATCG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGACTGGGGCACAGGGCTaGAAAGGAAGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQTGAQG*KGSIRV
Trigger: CACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGGCAGCACAAGTGGCTaGTGTCCCTCGGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQGSTSG*CPSVEY
Trigger: GTATTCCACCGAGGGACAGCAGCCACTTGTGCTGCC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCCCCCAGGGGGCGGCTaGTATCAAAGCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVPPGGG*YQSTQE
Trigger: TTCCTGAGTGCTTTGATACCAGCCGCCCCCTGGGGG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCGCGCAGAGCTGTACATaGAGTCCCCCAGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSAQSCT*SPPGGG
Trigger: GCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGC...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCGCTCCAGGCCTGGCTaGGAGAGCGCAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCRSRPG*ESAELY
Trigger: GTACAGCTCTGCGCTCTCCCAGCCAGGCCTGGAGCG...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCCTGGACAATGCTGCTaGAAGTCCTGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVPGQCC*KSCHLG
Trigger: CCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGGGCTGTGCAGTGACTaGTGGCCCAGAAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVGLCSD*WPRKQG
Trigger: GCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTCTGGGGGCTTGTCTTaGGGCTGGTCTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQSGGLS*GWSVSQ
Trigger: TTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGTTTGCGAGTCCTGTTaGGCCTCTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVVCESC*ASGLSS
Trigger: AGAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAAC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATGTCGCTGATGCTCTaGTCCTGTGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVMSLML*SCGWLS
Trigger: GGAGAGCCAGCCACAGGAGCAGAGCATCAGCGACAT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGCTCCTGGACAATGCTaGTGGAAGTCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVAPGQC*WKSCHL
Trigger: GAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQVLQQC*SHCGAL
Trigger: CAAGGCACCACAATGGGAGCAGCATTGCTGGAGGAC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAGCAACACCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: CAVTGGPENRALYAEAATPVLQQ*CSHCGA
Trigger: GGCACCACAATGGGAGCAGCATTGCTGGAGGACTGG...TGTTGCTGCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGAGAAACGATGGGCTGTaGAGTGACTGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQRNDGL*SDWWPR
Trigger: TCTGGGCCACCAGTCACTGCACAGCCCATCGTTTCT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVICGDL*LQGGLW
Trigger: CCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQLRSGF*RTSFSC
Trigger: GCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQECWHN*GTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAGCAACGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LCSDWWPRKQGLVRRGSNECWHN*GTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTC...GTTGCTGCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQCCTEC*HNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTAAGGACAGCAGGTCCTaGGCAGTCAGGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVKDSRS*AVRRST
Trigger: TGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCGCGCAGAGCTGTACATaGAGTCCCCCAGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVAQSCT*SPPGGG
Trigger: GCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGC...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVNCWPL*ERRQCE
Trigger: TTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCTCTCTTCCTGTATCTaGCCCAAGCCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQLSSCI*PKPGFS
Trigger: AGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGCTCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLLCGDL*LQGGLW
Trigger: CCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAG...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVVLQQC*SHCGAL
Trigger: CAAGGCACCACAATGGGAGCAGCATTGCTGGAGGAC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVLRSGF*RTSFSC
Trigger: GCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTTGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVCCTEC*HNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCA...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTCTTCTGTGAGGCACTaGCTCCTGTCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQSSVRH*LLSLLS
Trigger: AGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGAAGGACAGCAGGTCCTaGGCAGTCAGGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVKDSRS*AVRRST
Trigger: TGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTT...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAGCAACACTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: CAVTGGPENRALYAEAATLQGGL*SGAASK
Trigger: CTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAG...TGTTGCTGCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCTGCTGTCCCTCGGTaGAATACAGCTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQAAVPR*NTAVIP
Trigger: GGGAATTACAGCTGTATTCCACCGAGGGACAGCAGC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGCGCAGAGCTGTACATaGAGTCCCCCAGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTAQSCT*SPPGGG
Trigger: GCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACGCTCCAGGCCTGGCTaGGAGAGCGCAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPRSRPG*ESAELY
Trigger: GTACAGCTCTGCGCTCTCCCAGCCAGGCCTGGAGCG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCGCTCCAGGCCTGGCTaGGAGAGCGCAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVRSRPG*ESAELY
Trigger: GTACAGCTCTGCGCTCTCCCAGCCAGGCCTGGAGCG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCCTGGACAATGCTGCTaGAAGTCCTGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCPGQCC*KSCHLG
Trigger: CCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGG...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVHKGRS*TMLLEV
Trigger: GACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTGTGGTCTTCATGTCTaGTCCCAAGACTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQCGLHV*SQDSHQ
Trigger: CTGGTGAGAGTCTTGGGATCAGACATGAAGACCACA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVIVSFA*ADPVPF
Trigger: GAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGAT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACCTCTGGGCTCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHLWALL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAG...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCGATGGGCTGTGCAGTaGCTGGTGGCCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCRWAVQ*LVAQKT
Trigger: TGTTTTCTGGGCCACCAGTCACTGCACAGCCCATCG...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCTTGTGGTGCCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSLWCLL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGGCACCACAA...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGTGGCAGAGGAGACATaGAGGGAGTCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVVAEET*RESYPQ
Trigger: CTGTGGATATGACTCCCTGCATGTCTCCTCTGCCAC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCCTCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSLCGDL*LQGGLW
Trigger: CCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAG...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGGCAGCACAAGTGGCTaGTGTCCCTCGGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLGSTSG*CPSVEY
Trigger: GTATTCCACCGAGGGACAGCAGCCACTTGTGCTGCC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGATGTCGCTGATGCTCTaGTCCTGTGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLMSLML*SCGWLS
Trigger: GGAGAGCCAGCCACAGGAGCAGAGCATCAGCGACAT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTATGTCGCTGATGCTCTaGTCCTGTGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCMSLML*SCGWLS
Trigger: GGAGAGCCAGCCACAGGAGCAGAGCATCAGCGACAT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGCCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLPVLQQ*CSHCGA
Trigger: GGCACCACAATGGGAGCAGCATTGCTGGAGGACTGG...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGAGCCTTAGGTTCAGCTaGCTGTCGCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQSLRFS*LSQNPI
Trigger: AATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQACKPI*GLVLRL
Trigger: CAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTTGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAGCAACATCTTCTGTGAGGCACTaGCTCCTGTCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CAVTGGPENRALYAEAATSSVRH*LLSLLS
Trigger: AGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGA...TGTTGCTGCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTAAGGACAGCAGGTCCTaGGCAGTCAGGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCKDSRS*AVRRST
Trigger: TGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCACAGGGGTGTTGTGTaGCACTCTCTCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQHRGVV*HSLQFL
Trigger: CAAGAATTGGAGAGAGTGCCACACAACACCCCTGTG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGCTGCTGTCCCTCGGTaGAATACAGCTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVAAVPR*NTAVIP
Trigger: GGGAATTACAGCTGTATTCCACCGAGGGACAGCAGC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCTCCAGGCAGCACAAGTaGCTGCTGTCCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSSRQHK*LLSLGG
Trigger: TCCACCGAGGGACAGCAGCCACTTGTGCTGCCTGGA...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACACGCTCCAGGCCTGGCTaGGAGAGCGCAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTRSRPG*ESAELY
Trigger: GTACAGCTCTGCGCTCTCCCAGCCAGGCCTGGAGCG...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTTTGTGGTGCCTTGAGTaGTCACAGCTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVLWCLE*SQLLCL
Trigger: CAGACAGAGGAGCTGTGACCACTCAAGGCACCACAA...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCTGTGCAGTGACTGGTaGCCCAGAAAACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVLCSDW*PRKQGL
Trigger: AAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTCTGGGGGCTTGTCTTaGGGCTGGTCTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLSGGLS*GWSVSQ
Trigger: TTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLNCWPL*ERRQCE
Trigger: TTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGAGCTTTCCTCTTTGCTaGTACAGTGGAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQSFPLC*YSGIRR
Trigger: CCTCCTGATTCCACTGTATCAGCAAAGAGGAAAGCT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCCGTGTCCAGAGGCTGTaGGGTTGTGAGGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSRVQRL*GCEDVA
Trigger: AGCGACATCCTCACAACCTCACAGCCTCTGGACACG...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGCTCTGGGCTCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRLWALL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAG...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTAGAACATTGCTCTGGTaGAGGCTCCTCTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVRTLLW*RLLCGL
Trigger: AAGACCACAGAGGAGCCTGCACCAGAGCAATGTTCT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCTCTCTTCCTGTATCTaGCCCAAGCCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVLSSCI*PKPGFS
Trigger: AGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCACAGCTCCTCTGTCTaGTGTTTGCGAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVHSSSV*CLRVLL
Trigger: CAACAGGACTCGCAAACAGCAGACAGAGGAGCTGTG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGAAACGATGGGCTGTaGAGTGACTGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLRNDGL*SDWWPR
Trigger: TCTGGGCCACCAGTCACTGCACAGCCCATCGTTTCT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCTTCATCTACAACATaGTACCCTTCGTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQASSTT*YPSWTC
Trigger: GCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGAGAATAATGTGCAAGTaGCTTCTTCCCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQRIMCK*LLPCPG
Trigger: GCCAGGACAGGGAAGAAGCCACTTGCACATTATTCT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAGCAACAGCATTGAGACTTCTGTaGGTGAGGAACTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: CAVTGGPENRALYAEAATALRLL*VRNSGV
Trigger: CACTCCTGAGTTCCTCACCCACAGAAGTCTCAATGC...TGTTGCTGCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGATCCTCTTCTGGCAGTaGCTACAAGCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQILFWQ*LQAICQ
Trigger: CTGGCATATTGCTTGTAGCCACTGCCAGAAGAGGAT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLECWHN*GTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCACAGGGGTGTTGTGTaGCACTCTCTCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVHRGVV*HSLQFL
Trigger: CAAGAATTGGAGAGAGTGCCACACAACACCCCTGTG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCLQGGL*SGAASK
Trigger: CTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAG...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCTCCAGGCAGCACAAGTaGCTGCTGTCCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVSRQHK*LLSLGG
Trigger: TCCACCGAGGGACAGCAGCCACTTGTGCTGCCTGGA...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACCCCCAGGGGGCGGCTaGTATCAAAGCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPPPGGG*YQSTQE
Trigger: TTCCTGAGTGCTTTGATACCAGCCGCCCCCTGGGGG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCCTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCCTGGACAATGCTGCTaGAAGTCCTGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVPGQCC*KSCHLG
Trigger: CCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACCTGGACAATGCTGCTaGAAGTCCTGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPPGQCC*KSCHLG
Trigger: CCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACGGGCTGTGCAGTGACTaGTGGCCCAGAAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHGLCSD*WPRKQG
Trigger: GCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCC...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLIVSFA*ADPVPF
Trigger: GAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGAT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTAGCTTTCCTCTTTGCTaGTACAGTGGAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVSFPLC*YSGIRR
Trigger: CCTCCTGATTCCACTGTATCAGCAAAGAGGAAAGCT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCGTGTCCAGAGGCTGTaGGGTTGTGAGGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVRVQRL*GCEDVA
Trigger: AGCGACATCCTCACAACCTCACAGCCTCTGGACACG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACCGATGGGCTGTGCAGTaGCTGGTGGCCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHRWAVQ*LVAQKT
Trigger: TGTTTTCTGGGCCACCAGTCACTGCACAGCCCATCG...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCGATGGGCTGTGCAGTaGCTGGTGGCCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVRWAVQ*LVAQKT
Trigger: TGTTTTCTGGGCCACCAGTCACTGCACAGCCCATCG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGAGGACAAGCTTCTCCTaGAACCTCTGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQRTSFS*NLCSSF
Trigger: GAAACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTCAGCCCGCAACCTTTaGTTTTCTGCTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQSARNL*FSAFTK
Trigger: CTTTGTGAAAGCAGAAAAGCAAAGGTTGCGGGCTGA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAACTGGGGCACAGGGCTaGAAAGGAAGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPTGAQG*KGSIRV
Trigger: CACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCACTGGGGCACAGGGCTaGAAAGGAAGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSTGAQG*KGSIRV
Trigger: CACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGT...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQLIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGGCAGCACAAGTGGCTaGTGTCCCTCGGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPGSTSG*CPSVEY
Trigger: GTATTCCACCGAGGGACAGCAGCCACTTGTGCTGCC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCGGCAGCACAAGTGGCTaGTGTCCCTCGGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVGSTSG*CPSVEY
Trigger: GTATTCCACCGAGGGACAGCAGCCACTTGTGCTGCC...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGAGGAAGAATCCTTTCTaGAGAATCCAGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQRKNPF*RIQAAQ
Trigger: TTGTGCTGCCTGGATTCTGCAGAAAGGATTCTTCCT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCGCTCCTGGACAATGCTaGTGGAAGTCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVAPGQC*WKSCHL
Trigger: GAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGC...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPPVLQQ*CSHCGA
Trigger: GGCACCACAATGGGAGCAGCATTGCTGGAGGACTGG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACCCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHPVLQQ*CSHCGA
Trigger: GGCACCACAATGGGAGCAGCATTGCTGGAGGACTGG...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVPVLQQ*CSHCGA
Trigger: GGCACCACAATGGGAGCAGCATTGCTGGAGGACTGG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCAGAAACGATGGGCTGTaGAGTGACTGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSRNDGL*SDWWPR
Trigger: TCTGGGCCACCAGTCACTGCACAGCCCATCGTTTCT...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGTCCTGGCAGCCGCTTaGTTTTCTACCACATTTTTG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVVLAAA*FSTTFL
Trigger: CAAAAATGTGGTAGAAAACCAAGCGGCTGCCAGGAC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCCTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSLRSGF*RTSFSC
Trigger: GCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAG...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGATATGCCAGCTGAACTaGTTCTCTGGCAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQICQLN*FSGKNR
Trigger: CCTGTTTTTGCCAGAGAACCAGTTCAGCTGGCATAT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQTWLVS*VYGPAS
Trigger: TGAAGCTGGACCATACACCCATGACACTAACCATGT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGAGGAGCGGAATACTTaGAGTAGAAAAATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQEERNT*SRKMAQ
Trigger: CTGAGCCATTTTTCTACTCCAAGTATTCCGCTCCTC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCTGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSCCTEC*HNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCA...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCACAGGGGTGTTGTGTaGCACTCTCTCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVHRGVV*HSLQFL
Trigger: CAAGAATTGGAGAGAGTGCCACACAACACCCCTGTG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCCAGGCAGCACAAGTaGCTGCTGTCCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRSRQHK*LLSLGG
Trigger: TCCACCGAGGGACAGCAGCCACTTGTGCTGCCTGGA...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACCGCTCCAGGCCTGGCTaGGAGAGCGCAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNRSRPG*ESAELY
Trigger: GTACAGCTCTGCGCTCTCCCAGCCAGGCCTGGAGCG...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCCTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPHKGRS*TMLLEV
Trigger: GACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVHKGRS*TMLLEV
Trigger: GACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTTGTGGTGCCTTGAGTaGTCACAGCTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLLWCLE*SQLLCL
Trigger: CAGACAGAGGAGCTGTGACCACTCAAGGCACCACAA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTTTGTGGTGCCTTGAGTaGTCACAGCTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCLWCLE*SQLLCL
Trigger: CAGACAGAGGAGCTGTGACCACTCAAGGCACCACAA...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCCTGTGCAGTGACTGGTaGCCCAGAAAACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSLCSDW*PRKQGL
Trigger: AAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGGGCTGTGCAGTGACTaGTGGCCCAGAAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRGLCSD*WPRKQG
Trigger: GCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGGGCCATCAGGGCTGTaGTCTGATCTTCAGAAACGA +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLGPSGL*SDLQKR
Trigger: TCGTTTCTGAAGATCAGACCACAGCCCTGATGGCCC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTTGTGGTCTTCATGTCTaGTCCCAAGACTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCCGLHV*SQDSHQ
Trigger: CTGGTGAGAGTCTTGGGATCAGACATGAAGACCACA...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTGTGGTCTTCATGTCTaGTCCCAAGACTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLCGLHV*SQDSHQ
Trigger: CTGGTGAGAGTCTTGGGATCAGACATGAAGACCACA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCATCTGGGGGCTTGTCTTaGGGCTGGTCTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPSGGLS*GWSVSQ
Trigger: TTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGA...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACTCTGGGGGCTTGTCTTaGGGCTGGTCTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHSGGLS*GWSVSQ
Trigger: TTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGA...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGGGGACTTGGGACTCTaGAGTCCATGGATTGAATTC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLGDLGL*SPWIEF
Trigger: GAATTCAATCCATGGACTTCAGAGTCCCAAGTCCCC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVNCWPL*ERRQCE
Trigger: TTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHNCWPL*ERRQCE
Trigger: TTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTT...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGCGATGGGCTGTGCAGTaGCTGGTGGCCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRRWAVQ*LVAQKT
Trigger: TGTTTTCTGGGCCACCAGTCACTGCACAGCCCATCG...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGAGCTTTCCTCTTTGCTaGTACAGTGGAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVSFPLC*YSGIHR
Trigger: CCTGTGGATTCCACTGTATCAGCAAAGAGGAAAGCT...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGAACATTGCTCTGGTaGAGGCTCCTCTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLRTLLW*RLLCGL
Trigger: AAGACCACAGAGGAGCCTGCACCAGAGCAATGTTCT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGACTGGGGCACAGGGCTaGAAAGGAAGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRTGAQG*KGSIRV
Trigger: CACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGATTCTCATCCACAAATaGTGCACTGAGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQILIHK*CTECWH
Trigger: ATGCCAACACTCAGTGCAGCATTTGTGGATGAGAAT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGAGAAAAGCTTCCTCTTaGTCACAGGAGAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQRKASS*SQEKSS
Trigger: TGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCCTCTCTTCCTGTATCTaGCCCAAGCCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSLSSCI*PKPGFS
Trigger: AGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAG...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGGCAGCACAAGTGGCTaGTGTCCCTCGGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRGSTSG*CPSVEY
Trigger: GTATTCCACCGAGGGACAGCAGCCACTTGTGCTGCC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGGCAGCACAAGTGGCTaGTGTCCCTCGGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTGSTSG*CPSVEY
Trigger: GTATTCCACCGAGGGACAGCAGCCACTTGTGCTGCC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGATGTCGCTGATGCTCTaGTCCTGTGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRMSLML*SCGWLS
Trigger: GGAGAGCCAGCCACAGGAGCAGAGCATCAGCGACAT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAATGTCGCTGATGCTCTaGTCCTGTGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTMSLML*SCGWLS
Trigger: GGAGAGCCAGCCACAGGAGCAGAGCATCAGCGACAT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGCTCCTGGACAATGCTaGTGGAAGTCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTAPGQC*WKSCHL
Trigger: GAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAAGAAACGATGGGCTGTaGAGTGACTGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPRNDGL*SDWWPR
Trigger: TCTGGGCCACCAGTCACTGCACAGCCCATCGTTTCT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCCTTAGGTTCAGCTaGCTGTCGCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLSLRFS*LSQNPI
Trigger: AATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCCCATTTCAGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LCFLSSLRFSCLSQNPISVLQQC*SHCGAS
Trigger: GGAGGCACCACAATGGGAGCAGCATTGCTGGAGGAC...TGAAATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTAGAAGAACATTGCTCTaGTGCAGGCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCRRTLL*CRLLCG
Trigger: ACCACAGAGGAGCCTGCACCAGAGCAATGTTCTTCT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGAAGAACATTGCTCTaGTGCAGGCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLRRTLL*CRLLCG
Trigger: ACCACAGAGGAGCCTGCACCAGAGCAATGTTCTTCT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCCTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSLRSGF*RTSFSC
Trigger: GCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAG...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVLRSGF*RTSFSC
Trigger: GCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGCATTGAGACTTCTGTaGGTGAGGAACTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLALRLL*VRNSGV
Trigger: CACTCCTGAGTTCCTCACCCACAGAAGTCTCAATGC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATATGCCAGCTGAACTaGTTCTCTGGCAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVICQLN*FSGKNR
Trigger: CCTGTTTTTGCCAGAGAACCAGTTCAGCTGGCATAT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTAGTGTCATGGGTGTATaGTCCAGCTTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVSVMGV*SSFTIF
Trigger: GAAGATTGTGAAGCTGGACCATACACCCATGACACT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGAGGAGCGGAATACTTaGAGTAGAAAAATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVEERNT*SRKMAQ
Trigger: CTGAGCCATTTTTCTACTCCAAGTATTCCGCTCCTC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTTGTCCACCTGTTTTTaGAGCCTGACTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQLSTCF*SLTCSK
Trigger: TTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPECWHN*GTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHECWHN*GTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTC...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCTGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSCCTEC*HNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCA...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAAGGACAGCAGGTCCTaGGCAGTCAGGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTKDSRS*AVRRST
Trigger: TGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGCACAGGGGTGTTGTGTaGCACTCTCTCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLHRGVV*HSLQFL
Trigger: CAAGAATTGGAGAGAGTGCCACACAACACCCCTGTG...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVLQGGL*SGAASK
Trigger: CTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPLQGGL*SGAASK
Trigger: CTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHLQGGL*SGAASK
Trigger: CTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAG...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTTCTTCCTCAACAATGTaGACAATCTCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVSSSTM*TISSLS
Trigger: TGAGAGGGAGGAGATTGTCCACATTGTTGAGGAAGA...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTGCGCAGAGCTGTACATaGAGTCCCCCAGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTAQSCT*SPPGGG
Trigger: GCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGC...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCGCAGAGCTGTACATaGAGTCCCCCAGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKAQSCT*SPPGGG
Trigger: GCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGCTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAGGAGCTCTGTCACACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LNSGGCTSRCYSLEGALSHKGRS*TMLLEV
Trigger: GACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTG...TGACAGAGCTCCTTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCTGTGCAGTGACTGGTaGCCCAGAAAACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVLCSDW*PRKQGL
Trigger: AAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPIVSFA*ADPVPF
Trigger: GAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGAT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSIVSFA*ADPVPF
Trigger: GAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGAT...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCCTCTGGGCTCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLLWALL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAG...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGCAGAAACGATGGGCTTaGGTGGTCACAGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRQKRWA*VVTAPL
Trigger: CAGAGGAGCTGTGACCACTCAAGCCCATCGTTTCTG...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107208.8
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCACATTTTTGGGGAGTaGTTCATCTACAACATGGTA +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQHIFGE*FIYNMV
Trigger: TACCATGTTGTAGATGAAGCACTCCCCAAAAATGTG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCAGCCCGCAACCTTTaGTTTTCTGCTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVSARNL*FSAFTK
Trigger: CTTTGTGAAAGCAGAAAAGCAAAGGTTGCGGGCTGA...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCTGTGGAGTTTAAGCTaGTTTTTAAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQLWSLS*FLSSLT
Trigger: GGTCAAAGAGCTTAAAAAGCAGCTTAAACTCCACAG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCATCAGGGTGTTAGACTaGAGCAAGCTCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSIRVLD*SKLSGR
Trigger: CCGACCTGAGAGCTTGCTGCAGTCTAACACCCTGAT...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCATCAGGGTGTTAGACTaGAGCAAGCTCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVIRVLD*SKLSGR
Trigger: CCGACCTGAGAGCTTGCTGCAGTCTAACACCCTGAT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGCTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVLIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTCTCATCCACAAATaGTGCACTGAGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVILIHK*CTECWH
Trigger: ATGCCAACACTCAGTGCAGCATTTGTGGATGAGAAT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTAGAAAAGCTTCCTCTTaGTCACAGGAGAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVRKASS*SQEKSS
Trigger: TGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACTCTCTTCCTGTATCTaGCCCAAGCCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPLSSCI*PKPGFS
Trigger: AGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACACAGCTCCTCTGTCTaGTGTTTGCGAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPHSSSV*CLRVLL
Trigger: CAACAGGACTCGCAAACAGCAGACAGAGGAGCTGTG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCCACAGCTCCTCTGTCTaGTGTTTGCGAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSHSSSV*CLRVLL
Trigger: CAACAGGACTCGCAAACAGCAGACAGAGGAGCTGTG...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCACAGCTCCTCTGTCTaGTGTTTGCGAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVHSSSV*CLRVLL
Trigger: CAACAGGACTCGCAAACAGCAGACAGAGGAGCTGTG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRVLQQC*SHCGAL
Trigger: CAAGGCACCACAATGGGAGCAGCATTGCTGGAGGAC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGAAACGATGGGCTGTaGAGTGACTGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTRNDGL*SDWWPR
Trigger: TCTGGGCCACCAGTCACTGCACAGCCCATCGTTTCT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAGAAACGATGGGCTGTaGAGTGACTGGTGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRRNDGL*SDWWPR
Trigger: TCTGGGCCACCAGTCACTGCACAGCCCATCGTTTCT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGTCCTGGCAGCCGCTTaGTTTTCTACCACATTTTTG +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLVLAAA*FSTTFL
Trigger: CAAAAATGTGGTAGAAAACCAAGCGGCTGCCAGGAC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGAATAATGTGCAAGTaGCTTCTTCCCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLRIMCK*LLPCPG
Trigger: GCCAGGACAGGGAAGAAGCCACTTGCACATTATTCT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCGTGCAGGCTCCTCTGTaGTCTTCATGTCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVVQAPL*SSCLIP
Trigger: TGGGATCAGACATGAAGACCACAGAGGAGCCTGCAC...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTGCTGAACTGGTTCTCTaGCAAAAACAGGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCAELVL*QKQGFL
Trigger: GAGGAAACCCTGTTTTTGCCAGAGAACCAGTTCAGC...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGCTGAACTGGTTCTCTaGCAAAAACAGGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLAELVL*QKQGFL
Trigger: GAGGAAACCCTGTTTTTGCCAGAGAACCAGTTCAGC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGCTTGGAGTAGAAAAATaGCTCAGAGGATATCACAAC +
Preference number: 4 (lower is better)
Translates to: QGLPPTLNDSRETTSERQLGVEK*LRGYHN
Trigger: GTTGTGATATCCTCTGAGCCATTTTTCTACTCCAAG...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVNKLGS*LKMSPI
Trigger: GATGGGACTCATCTTCAGCCAGGAACCAAGTTTATT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCTGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCATCTTCTGTGAGGCACTaGCTCCTGTCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPSSVRH*LLSLLS
Trigger: AGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGA...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCAGGAGGGTTGTGGTCTaGAGCAGCATCCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVRRVVV*SSIQGK
Trigger: CTTACCTTGGATGCTGCTCCAGACCACAACCCTCCT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAAGGAGGGTTGTGGTCTaGAGCAGCATCCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPRRVVV*SSIQGK
Trigger: CTTACCTTGGATGCTGCTCCAGACCACAACCCTCCT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACACTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTLQGGL*SGAASK
Trigger: CTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAG...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCGCTGCTGTCCCTCGGTaGAATACAGCTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVAAVPR*NTAVIP
Trigger: GGGAATTACAGCTGTATTCCACCGAGGGACAGCAGC...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCTTCCTCAACAATGTaGACAATCTCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVSSSTM*TISSLS
Trigger: TGAGAGGGAGGAGATTGTCCACATTGTTGAGGAAGA...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGGCAGTTATTTAATACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTCTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: RQLFNTRSVLNSGGCTSRLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...ACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGTATTAAATAACTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGCTGTGCAGTGACTGGTaGCCCAGAAAACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRLCSDW*PRKQGL
Trigger: AAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCAACGATGGGCTTGAGTaGTCACAGCTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSNDGLE*SQLLCL
Trigger: CAGACAGAGGAGCTGTGACCACTCAAGCCCATCGTT...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107208.8
CDS-3UTR TCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAAGCAATATGCCAGCTaGACTGGTTCTCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLKQYAS*TGSLAK
Trigger: TTTTGCCAGAGAACCAGTTCAGCTGGCATATTGCTT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTAAGCAATATGCCAGCTaGACTGGTTCTCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCKQYAS*TGSLAK
Trigger: TTTTGCCAGAGAACCAGTTCAGCTGGCATATTGCTT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACGGGGACTTGGGACTCTaGAGTCCATGGATTGAATTC +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHGDLGL*SPWIEF
Trigger: GAATTCAATCCATGGACTTCAGAGTCCCAAGTCCCC...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCCCATTTCAATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LCFLSSLRFSCLSQNPISIVSFA*ADPVPF
Trigger: GAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGAT...TGAAATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGAGGAAGCAGAAGACTaGCTTTGGACTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLEEAED*LWTSSS
Trigger: AGATGAAGAAGTCCAAAGTCAGTCTTCTGCTTCCTC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACCGTGTCCAGAGGCTGTaGGGTTGTGAGGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNRVQRL*GCEDVA
Trigger: AGCGACATCCTCACAACCTCACAGCCTCTGGACACG...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTGGGCTCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVLWALL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAG...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACCTCTGGGCTCTCCTCTaGTGTCATCAGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNLWALL*CHQGLG
Trigger: CCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAG...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TATTGTAATTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCGTTTGCGAGTCCTGTTaGGCCTCTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: YCNCVFSAALGSAACRRIVCESC*ASGLSS
Trigger: AGAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAAC...GATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAATTACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107208.8
CDS-3UTR TCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGCGATGGGCTGTGCAGTaGCTGGTGGCCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTRWAVQ*LVAQKT
Trigger: TGTTTTCTGGGCCACCAGTCACTGCACAGCCCATCG...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CTGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAGCAACTCTTCATATTCACCTTaGCTATTGATGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: LCSDWWPRKQGLVRRGSNSSYSP*LLMDIS
Trigger: GGAGATATCCATCAATAGTCAAGGTGAATATGAAGA...GTTGCTGCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAAGAACATTGCTCTGGTaGAGGCTCCTCTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPRTLLW*RLLCGL
Trigger: AAGACCACAGAGGAGCCTGCACCAGAGCAATGTTCT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAATCAGGGTGTTAGACTaGAGCAAGCTCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTIRVLD*SKLSGR
Trigger: CCGACCTGAGAGCTTGCTGCAGTCTAACACCCTGAT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTGGGGCACAGGGCTaGAAAGGAAGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTTGAQG*KGSIRV
Trigger: CACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TATTGTAATTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCACTGGGGCACAGGGCTaGAAAGGAAGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: YCNCVFSAALGSAACRRITGAQG*KGSIRV
Trigger: CACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGT...GATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAATTACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGTGGCAGAGGAGACATaGAGGGAGTCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTVAEET*RESYPQ
Trigger: CTGTGGATATGACTCCCTGCATGTCTCCTCTGCCAC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGCTCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMLCGDL*LQGGLW
Trigger: CCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAG...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCCTCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLLCGDL*LQGGLW
Trigger: CCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAG...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGGAAGAATCCTTTCTaGAGAATCCAGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLRKNPF*RIQAAQ
Trigger: TTGTGCTGCCTGGATTCTGCAGAAAGGATTCTTCCT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TATTGTAATTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCGCTCCTGGACAATGCTaGTGGAAGTCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: YCNCVFSAALGSAACRRIAPGQC*WKSCHL
Trigger: GAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGC...GATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAATTACAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGGCTCCTGGACAATGCTaGTGGAAGTCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTAPGQC*WKSCHL
Trigger: GAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGC...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCAGCCTTAGGTTCAGCTaGCTGTCGCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSSLRFS*LSQNPI
Trigger: AATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCT...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCGCTTCATCTACAACATaGTACCCTTCGTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSASSTT*YPSWTC
Trigger: GCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGC...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCAGAAGAACATTGCTCTaGTGCAGGCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVRRTLL*CRLLCG
Trigger: ACCACAGAGGAGCCTGCACCAGAGCAATGTTCTTCT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHACKPI*GLVLRL
Trigger: CAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGC...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPACKPI*GLVLRL
Trigger: CAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSACKPI*GLVLRL
Trigger: CAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGC...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGCATTGAGACTTCTGTaGGTGAGGAACTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPALRLL*VRNSGV
Trigger: CACTCCTGAGTTCCTCACCCACAGAAGTCTCAATGC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACGCATTGAGACTTCTGTaGGTGAGGAACTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHALRLL*VRNSGV
Trigger: CACTCCTGAGTTCCTCACCCACAGAAGTCTCAATGC...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTATATGCCAGCTGAACTaGTTCTCTGGCAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCICQLN*FSGKNR
Trigger: CCTGTTTTTGCCAGAGAACCAGTTCAGCTGGCATAT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGAGGAGCGGAATACTTaGAGTAGAAAAATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLEERNT*SRKMAQ
Trigger: CTGAGCCATTTTTCTACTCCAAGTATTCCGCTCCTC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTGAGGAGCGGAATACTTaGAGTAGAAAAATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCEERNT*SRKMAQ
Trigger: CTGAGCCATTTTTCTACTCCAAGTATTCCGCTCCTC...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAGGAGCTCTGTCATGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LNSGGCTSRCYSLEGALSCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...TGACAGAGCTCCTTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATCTTCTGTGAGGCACTaGCTCCTGTCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTSSVRH*LLSLLS
Trigger: AGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACACAGGGGTGTTGTGTaGCACTCTCTCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPHRGVV*HSLQFL
Trigger: CAAGAATTGGAGAGAGTGCCACACAACACCCCTGTG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLVSHTN*VPLRSS
Trigger: AGAAGACCTGAGTGGGACCCAATTTGTATGTGAGAC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAGGAGGGTTGTGGTCTaGAGCAGCATCCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRRRVVV*SSIQGK
Trigger: CTTACCTTGGATGCTGCTCCAGACCACAACCCTCCT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGCTGCTGTCCCTCGGTaGAATACAGCTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRAAVPR*NTAVIP
Trigger: GGGAATTACAGCTGTATTCCACCGAGGGACAGCAGC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGCCCCCAGGGGGCGGCTaGTATCAAAGCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMPPGGG*YQSTQE
Trigger: TTCCTGAGTGCTTTGATACCAGCCGCCCCCTGGGGG...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCGGGCTGTGCAGTGACTaGTGGCCCAGAAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLGLCSD*WPRKQG
Trigger: GCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCC...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGGGGCTGTGCAGTGACTaGTGGCCCAGAAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMGLCSD*WPRKQG
Trigger: GCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCC...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGGGCCATCAGGGCTGTaGTCTGATCTTCAGAAACGA +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRGPSGL*SDLQKR
Trigger: TCGTTTCTGAAGATCAGACCACAGCCCTGATGGCCC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGGGCCATCAGGGCTGTaGTCTGATCTTCAGAAACGA +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTGPSGL*SDLQKR
Trigger: TCGTTTCTGAAGATCAGACCACAGCCCTGATGGCCC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATGTGGTCTTCATGTCTaGTCCCAAGACTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTCGLHV*SQDSHQ
Trigger: CTGGTGAGAGTCTTGGGATCAGACATGAAGACCACA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTGTGGTCTTCATGTCTaGTCCCAAGACTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRCGLHV*SQDSHQ
Trigger: CTGGTGAGAGTCTTGGGATCAGACATGAAGACCACA...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGTCTGGGGGCTTGTCTTaGGGCTGGTCTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTSGGLS*GWSVSQ
Trigger: TTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGA...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGGGGACTTGGGACTCTaGAGTCCATGGATTGAATTC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTGDLGL*SPWIEF
Trigger: GAATTCAATCCATGGACTTCAGAGTCCCAAGTCCCC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACAGCTTTCCTCTTTGCTaGTACAGTGGAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHSFPLC*YSGIRR
Trigger: CCTCCTGATTCCACTGTATCAGCAAAGAGGAAAGCT...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCCGTGTCCAGAGGCTGTaGGGTTGTGAGGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLRVQRL*GCEDVA
Trigger: AGCGACATCCTCACAACCTCACAGCCTCTGGACACG...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCGTTTGCGAGTCCTGTTaGGCCTCTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLVCESC*ASGLSS
Trigger: AGAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAAC...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGGTTTGCGAGTCCTGTTaGGCCTCTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMVCESC*ASGLSS
Trigger: AGAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAAC...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAGAACATTGCTCTGGTaGAGGCTCCTCTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRRTLLW*RLLCGL
Trigger: AAGACCACAGAGGAGCCTGCACCAGAGCAATGTTCT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTATTCTCATCCACAAATaGTGCACTGAGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCILIHK*CTECWH
Trigger: ATGCCAACACTCAGTGCAGCATTTGTGGATGAGAAT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGATTCTCATCCACAAATaGTGCACTGAGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLILIHK*CTECWH
Trigger: ATGCCAACACTCAGTGCAGCATTTGTGGATGAGAAT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACACCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGCCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AGGCAGTTATTTAATACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTGTGGCAGAGGAGACATaGAGGGAGTCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: RQLFNTRSVLNSGGCTSRVAEET*RESYPQ
Trigger: CTGTGGATATGACTCCCTGCATGTCTCCTCTGCCAC...ACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGTATTAAATAACTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCAGGAAGAATCCTTTCTaGAGAATCCAGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSRKNPF*RIQAAQ
Trigger: TTGTGCTGCCTGGATTCTGCAGAAAGGATTCTTCCT...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGATGTCGCTGATGCTCTaGTCCTGTGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMMSLML*SCGWLS
Trigger: GGAGAGCCAGCCACAGGAGCAGAGCATCAGCGACAT...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNVLQQC*SHCGAL
Trigger: CAAGGCACCACAATGGGAGCAGCATTGCTGGAGGAC...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGCCTTAGGTTCAGCTaGCTGTCGCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTSLRFS*LSQNPI
Trigger: AATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCGCTTCATCTACAACATaGTACCCTTCGTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSASSTT*YPSWTC
Trigger: GCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGC...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGTCCTGGCAGCCGCTTaGTTTTCTACCACATTTTTG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPVLAAA*FSTTFL
Trigger: CAAAAATGTGGTAGAAAACCAAGCGGCTGCCAGGAC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAGAAGAACATTGCTCTaGTGCAGGCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRRRTLL*CRLLCG
Trigger: ACCACAGAGGAGCCTGCACCAGAGCAATGTTCTTCT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGAAGAACATTGCTCTaGTGCAGGCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTRRTLL*CRLLCG
Trigger: ACCACAGAGGAGCCTGCACCAGAGCAATGTTCTTCT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTACKPI*GLVLRL
Trigger: CAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRACKPI*GLVLRL
Trigger: CAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCGCTGAACTGGTTCTCTaGCAAAAACAGGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVAELVL*QKQGFL
Trigger: GAGGAAACCCTGTTTTTGCCAGAGAACCAGTTCAGC...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACGCTGAACTGGTTCTCTaGCAAAAACAGGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHAELVL*QKQGFL
Trigger: GAGGAAACCCTGTTTTTGCCAGAGAACCAGTTCAGC...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGCTGAACTGGTTCTCTaGCAAAAACAGGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPAELVL*QKQGFL
Trigger: GAGGAAACCCTGTTTTTGCCAGAGAACCAGTTCAGC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTECWHN*GTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTC...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACTGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNCCTEC*HNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCA...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLNKLGS*LKMSPI
Trigger: GATGGGACTCATCTTCAGCCAGGAACCAAGTTTATT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGAAGGACAGCAGGTCCTaGGCAGTCAGGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMKDSRS*AVRRST
Trigger: TGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTT...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTACTCTCTCCAATTCTTaGACAATGTTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: LPPTLNDSRETTSERQAVTLSNS*TMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSVSHTN*VPLRSS
Trigger: AGAAGACCTGAGTGGGACCCAATTTGTATGTGAGAC...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTCCAGGCAGCACAAGTaGCTGCTGTCCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNSRQHK*LLSLGG
Trigger: TCCACCGAGGGACAGCAGCCACTTGTGCTGCCTGGA...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTCCAGGCAGCACAAGTaGCTGCTGTCCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTSRQHK*LLSLGG
Trigger: TCCACCGAGGGACAGCAGCCACTTGTGCTGCCTGGA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACCCCCAGGGGGCGGCTaGTATCAAAGCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKPPGGG*YQSTQE
Trigger: TTCCTGAGTGCTTTGATACCAGCCGCCCCCTGGGGG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTCGCTCCAGGCCTGGCTaGGAGAGCGCAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTRSRPG*ESAELY
Trigger: GTACAGCTCTGCGCTCTCCCAGCCAGGCCTGGAGCG...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACCCTGGACAATGCTGCTaGAAGTCCTGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNPGQCC*KSCHLG
Trigger: CCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGG...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGGGCTGTGCAGTGACTaGTGGCCCAGAAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKGLCSD*WPRKQG
Trigger: GCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTCTGGGGGCTTGTCTTaGGGCTGGTCTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLSGGLS*GWSVSQ
Trigger: TTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCAAGCAATATGCCAGCTaGACTGGTTCTCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVKQYAS*TGSLAK
Trigger: TTTTGCCAGAGAACCAGTTCAGCTGGCATATTGCTT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTIVSFA*ADPVPF
Trigger: GAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGAT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAGCTTTCCTCTTTGCTaGTACAGTGGAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRSFPLC*YSGIRR
Trigger: CCTCCTGATTCCACTGTATCAGCAAAGAGGAAAGCT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCCCATTTCAAGCTTTCCTCTTTGCTaGTACAGTGGAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LCFLSSLRFSCLSQNPISSFPLC*YSGIRR
Trigger: CCTCCTGATTCCACTGTATCAGCAAAGAGGAAAGCT...TGAAATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACGAGGAAGCAGAAGACTaGCTTTGGACTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHEEAED*LWTSSS
Trigger: AGATGAAGAAGTCCAAAGTCAGTCTTCTGCTTCCTC...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACGTGTCCAGAGGCTGTaGGGTTGTGAGGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKRVQRL*GCEDVA
Trigger: AGCGACATCCTCACAACCTCACAGCCTCTGGACACG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGTTTGCGAGTCCTGTTaGGCCTCTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVVCESC*ASGLSS
Trigger: AGAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAAC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAAGGACAAGCTTCTCCTaGAACCTCTGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPRTSFS*NLCSSF
Trigger: GAAACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACAGGACAAGCTTCTCCTaGAACCTCTGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHRTSFS*NLCSSF
Trigger: GAAACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCT...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCATGGCTACAAGCAATATaGCAGCTGAACTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPWLQAI*QLNWFS
Trigger: AGAGAACCAGTTCAGCTGGCATATTGCTTGTAGCCA...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACTCAGCCCGCAACCTTTaGTTTTCTGCTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHSARNL*FSAFTK
Trigger: CTTTGTGAAAGCAGAAAAGCAAAGGTTGCGGGCTGA...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCTCAGCCCGCAACCTTTaGTTTTCTGCTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVSARNL*FSAFTK
Trigger: CTTTGTGAAAGCAGAAAAGCAAAGGTTGCGGGCTGA...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACATCAGGGTGTTAGACTaGAGCAAGCTCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNIRVLD*SKLSGR
Trigger: CCGACCTGAGAGCTTGCTGCAGTCTAACACCCTGAT...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACACTGGGGCACAGGGCTaGAAAGGAAGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNTGAQG*KGSIRV
Trigger: CACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGT...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPLIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVLIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCATTCTCATCCACAAATaGTGCACTGAGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSILIHK*CTECWH
Trigger: ATGCCAACACTCAGTGCAGCATTTGTGGATGAGAAT...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCAGAAAAGCTTCCTCTTaGTCACAGGAGAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSRKASS*SQEKSS
Trigger: TGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCT...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAACCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLEPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGGTGGCAGAGGAGACATaGAGGGAGTCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTVAEET*RESYPQ
Trigger: CTGTGGATATGACTCCCTGCATGTCTCCTCTGCCAC...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACCTCTCTTCCTGTATCTaGCCCAAGCCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNLSSCI*PKPGFS
Trigger: AGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAG...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAATGTCGCTGATGCTCTaGTCCTGTGGCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKMSLML*SCGWLS
Trigger: GGAGAGCCAGCCACAGGAGCAGAGCATCAGCGACAT...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGCTCCTGGACAATGCTaGTGGAAGTCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVAPGQC*WKSCHL
Trigger: GAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCTCCTGGACAATGCTaGTGGAAGTCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKAPGQC*WKSCHL
Trigger: GAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVPVLQQ*CSHCGA
Trigger: GGCACCACAATGGGAGCAGCATTGCTGGAGGACTGG...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGGTGCAGGCTCCTCTGTaGTCTTCATGTCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTVQAPL*SSCLIP
Trigger: TGGGATCAGACATGAAGACCACAGAGGAGCCTGCAC...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCCTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLLRSGF*RTSFSC
Trigger: GCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAG...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGCTGAACTGGTTCTCTaGCAAAAACAGGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTAELVL*QKQGFL
Trigger: GAGGAAACCCTGTTTTTGCCAGAGAACCAGTTCAGC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCATATGCCAGCTGAACTaGTTCTCTGGCAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVICQLN*FSGKNR
Trigger: CCTGTTTTTGCCAGAGAACCAGTTCAGCTGGCATAT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAATCCTCTTCTGGCAGTaGCTACAAGCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTILFWQ*LQAICQ
Trigger: CTGGCATATTGCTTGTAGCCACTGCCAGAAGAGGAT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGATCCTCTTCTGGCAGTaGCTACAAGCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRILFWQ*LQAICQ
Trigger: CTGGCATATTGCTTGTAGCCACTGCCAGAAGAGGAT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCAGTGTCATGGGTGTATaGTCCAGCTTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVSVMGV*SSFTIF
Trigger: GAAGATTGTGAAGCTGGACCATACACCCATGACACT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPTWLVS*VYGPAS
Trigger: TGAAGCTGGACCATACACCCATGACACTAACCATGT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSTWLVS*VYGPAS
Trigger: TGAAGCTGGACCATACACCCATGACACTAACCATGT...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGCTTGGAGTAGAAAAATaGCTCAGAGGATATCACAAC +
Preference number: 4 (lower is better)
Translates to: KASKGFHPHSMTAERPPLLGVEK*LRGYHN
Trigger: GTTGTGATATCCTCTGAGCCATTTTTCTACTCCAAG...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCTTGGAGTAGAAAAATaGCTCAGAGGATATCACAAC +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCLGVEK*LRGYHN
Trigger: GTTGTGATATCCTCTGAGCCATTTTTCTACTCCAAG...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLECWHN*GTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTC...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLCCTEC*HNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGACTCTCTCCAATTCTTaGACAATGTTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVTLSNS*TMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGT...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAACACAGGGGTGTTGTGTaGCACTCTCTCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLEHRGVV*HSLQFL
Trigger: CAAGAATTGGAGAGAGTGCCACACAACACCCCTGTG...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPVSHTN*VPLRSS
Trigger: AGAAGACCTGAGTGGGACCCAATTTGTATGTGAGAC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLLQGGL*SGAASK
Trigger: CTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAG...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGGCTGCTGTCCCTCGGTaGAATACAGCTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTAAVPR*NTAVIP
Trigger: GGGAATTACAGCTGTATTCCACCGAGGGACAGCAGC...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TATTGTAATTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCGCTGCTGTCCCTCGGTaGAATACAGCTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: YCNCVFSAALGSAACRRIAAVPR*NTAVIP
Trigger: GGGAATTACAGCTGTATTCCACCGAGGGACAGCAGC...GATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAATTACAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTCACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTHKGRS*TMLLEV
Trigger: GACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTG...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVHKGRS*TMLLEV
Trigger: GACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTG...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKHKGRS*TMLLEV
Trigger: GACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACTTGTGGTGCCTTGAGTaGTCACAGCTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNLWCLE*SQLLCL
Trigger: CAGACAGAGGAGCTGTGACCACTCAAGGCACCACAA...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGCTGTGCAGTGACTGGTaGCCCAGAAAACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMLCSDW*PRKQGL
Trigger: AAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTCTGGGGGCTTGTCTTaGGGCTGGTCTGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNSGGLS*GWSVSQ
Trigger: TTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGA...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKNCWPL*ERRQCE
Trigger: TTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTT...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLIVSFA*ADPVPF
Trigger: GAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGAT...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMASCLL*GTGSCP
Trigger: GGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGC...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TATTGTAATTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCAGAACATTGCTCTGGTaGAGGCTCCTCTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: YCNCVFSAALGSAACRRIRTLLW*RLLCGL
Trigger: AAGACCACAGAGGAGCCTGCACCAGAGCAATGTTCT...GATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAATTACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTGGCTACAAGCAATATaGCAGCTGAACTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRWLQAI*QLNWFS
Trigger: AGAGAACCAGTTCAGCTGGCATATTGCTTGTAGCCA...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATGGCTACAAGCAATATaGCAGCTGAACTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTWLQAI*QLNWFS
Trigger: AGAGAACCAGTTCAGCTGGCATATTGCTTGTAGCCA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCATCAGGGTGTTAGACTaGAGCAAGCTCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLIRVLD*SKLSGR
Trigger: CCGACCTGAGAGCTTGCTGCAGTCTAACACCCTGAT...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACACTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTLIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAAGAAAAGCTTCCTCTTaGTCACAGGAGAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPRKASS*SQEKSS
Trigger: TGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTGTGGGGACCTCTGCCTaGAAGGAGGGTTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTVGTSA*KEGCGL
Trigger: CAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCAC...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCTCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGLCGDL*LQGGLW
Trigger: CCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTCTCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTLCGDL*LQGGLW
Trigger: CCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAG...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTVLQQC*SHCGAL
Trigger: CAAGGCACCACAATGGGAGCAGCATTGCTGGAGGAC...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVVLQQC*SHCGAL
Trigger: CAAGGCACCACAATGGGAGCAGCATTGCTGGAGGAC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACAGCCTTAGGTTCAGCTaGCTGTCGCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNSLRFS*LSQNPI
Trigger: AATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCT...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGAGAAGAACATTGCTCTaGTGCAGGCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTRRTLL*CRLLCG
Trigger: ACCACAGAGGAGCCTGCACCAGAGCAATGTTCTTCT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKLRSGF*RTSFSC
Trigger: GCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVLRSGF*RTSFSC
Trigger: GCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAG...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TATTGTAATTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCGCATTGAGACTTCTGTaGGTGAGGAACTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: YCNCVFSAALGSAACRRIALRLL*VRNSGV
Trigger: CACTCCTGAGTTCCTCACCCACAGAAGTCTCAATGC...GATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAATTACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAATATGCCAGCTGAACTaGTTCTCTGGCAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTICQLN*FSGKNR
Trigger: CCTGTTTTTGCCAGAGAACCAGTTCAGCTGGCATAT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAGTGTCATGGGTGTATaGTCCAGCTTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRSVMGV*SSFTIF
Trigger: GAAGATTGTGAAGCTGGACCATACACCCATGACACT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTTWLVS*VYGPAS
Trigger: TGAAGCTGGACCATACACCCATGACACTAACCATGT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: PECLLSFQVPARPSESKVSFNKT*LVSWVY
Trigger: ATACACCCATGACACTAACCATGTTTTGTTAAAGCT...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCATTGTCCACCTGTTTTTaGAGCCTGACTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPLSTCF*SLTCSK
Trigger: TTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAA...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTCCTEC*HNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAATGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKCCTEC*HNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCA...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSNKLGS*LKMSPI
Trigger: GATGGGACTCATCTTCAGCCAGGAACCAAGTTTATT...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHNKLGS*LKMSPI
Trigger: GATGGGACTCATCTTCAGCCAGGAACCAAGTTTATT...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTCTTCTGTGAGGCACTaGCTCCTGTCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMSSVRH*LLSLLS
Trigger: AGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTCTTCTGTGAGGCACTaGCTCCTGTCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLSSVRH*LLSLLS
Trigger: AGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTACTCTCTCCAATTCTTaGACAATGTTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCTLSNS*TMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACCACAGGGGTGTTGTGTaGCACTCTCTCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNHRGVV*HSLQFL
Trigger: CAAGAATTGGAGAGAGTGCCACACAACACCCCTGTG...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCAGGAGGGTTGTGGTCTaGAGCAGCATCCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLRRVVV*SSIQGK
Trigger: CTTACCTTGGATGCTGCTCCAGACCACAACCCTCCT...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGAGGAGGGTTGTGGTCTaGAGCAGCATCCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMRRVVV*SSIQGK
Trigger: CTTACCTTGGATGCTGCTCCAGACCACAACCCTCCT...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCTCCAGGCAGCACAAGTaGCTGCTGTCCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGSRQHK*LLSLGG
Trigger: TCCACCGAGGGACAGCAGCCACTTGTGCTGCCTGGA...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTTCCAGGCAGCACAAGTaGCTGCTGTCCCTCGGTGGA +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTSRQHK*LLSLGG
Trigger: TCCACCGAGGGACAGCAGCCACTTGTGCTGCCTGGA...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCTTCCTCAACAATGTaGACAATCTCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRSSSTM*TISSLS
Trigger: TGAGAGGGAGGAGATTGTCCACATTGTTGAGGAAGA...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCCTGGACAATGCTGCTaGAAGTCCTGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCPGQCC*KSCHLG
Trigger: CCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGG...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTTATTCACTTGAAGGAGCTCTGTCACAACCTGCAGGATATTGTAATTGTGTTTCACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: VIHLKELCHNLQDIVIVFHKGRS*TMLLEV
Trigger: GACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTG...AAACACAATTACAATATCCTGCAGGTTGTGACAGAGCTCCTTCAAGTGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTCTGTGCAGTGACTGGTaGCCCAGAAAACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTLCSDW*PRKQGL
Trigger: AAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGGGCTGTGCAGTGACTaGTGGCCCAGAAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGGLCSD*WPRKQG
Trigger: GCCCTGTTTTCTGGGCCACCAGTCACTGCACAGCCC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGGGGCCATCAGGGCTGTaGTCTGATCTTCAGAAACGA +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMGPSGL*SDLQKR
Trigger: TCGTTTCTGAAGATCAGACCACAGCCCTGATGGCCC...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCGGGCCATCAGGGCTGTaGTCTGATCTTCAGAAACGA +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLGPSGL*SDLQKR
Trigger: TCGTTTCTGAAGATCAGACCACAGCCCTGATGGCCC...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGCCTCGCTCCAGGCTTTaGACTTCTTCATCTTGGACT +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTPRSRL*TSSSWT
Trigger: AGTCCAAGATGAAGAAGTCCAAAGCCTGGAGCGAGG...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACTTGCATCTGTAGCTaGTTTCCTTGCTTAATGTTA +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSTCICS*FPCLML
Trigger: TAACATTAAGCAAGGAAATCAGCTACAGATGCAAGT...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTGTGGTCTTCATGTCTaGTCCCAAGACTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLCGLHV*SQDSHQ
Trigger: CTGGTGAGAGTCTTGGGATCAGACATGAAGACCACA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGGGGGACTTGGGACTCTaGAGTCCATGGATTGAATTC +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMGDLGL*SPWIEF
Trigger: GAATTCAATCCATGGACTTCAGAGTCCCAAGTCCCC...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTIVSFA*ADPVPF
Trigger: GAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGAT...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AGGCAGTTATTTAATACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTGAGGAAGCAGAAGACTaGCTTTGGACTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RQLFNTRSVLNSGGCTSREEAED*LWTSSS
Trigger: AGATGAAGAAGTCCAAAGTCAGTCTTCTGCTTCCTC...ACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGTATTAAATAACTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTCGTGTCCAGAGGCTGTaGGGTTGTGAGGATGTCGCT +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTRVQRL*GCEDVA
Trigger: AGCGACATCCTCACAACCTCACAGCCTCTGGACACG...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGGTTTGCGAGTCCTGTTaGGCCTCTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMVCESC*ASGLSS
Trigger: AGAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAAC...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGTTTGCGAGTCCTGTTaGGCCTCTGGGCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGVCESC*ASGLSS
Trigger: AGAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAAC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCGATGGGCTGTGCAGTaGCTGGTGGCCCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGRWAVQ*LVAQKT
Trigger: TGTTTTCTGGGCCACCAGTCACTGCACAGCCCATCG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCTCTTCATATTCACCTTaGCTATTGATGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSSSYSP*LLMDIS
Trigger: GGAGATATCCATCAATAGTCAAGGTGAATATGAAGA...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACACATTTTTGGGGAGTaGTTCATCTACAACATGGTA +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPHIFGE*FIYNMV
Trigger: TACCATGTTGTAGATGAAGCACTCCCCAAAAATGTG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCAGAACATTGCTCTGGTaGAGGCTCCTCTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLRTLLW*RLLCGL
Trigger: AAGACCACAGAGGAGCCTGCACCAGAGCAATGTTCT...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCTGTGGAGTTTAAGCTaGTTTTTAAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVLWSLS*FLSSLT
Trigger: GGTCAAAGAGCTTAAAAAGCAGCTTAAACTCCACAG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCCTGTGGAGTTTAAGCTaGTTTTTAAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSLWSLS*FLSSLT
Trigger: GGTCAAAGAGCTTAAAAAGCAGCTTAAACTCCACAG...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACCTGTGGAGTTTAAGCTaGTTTTTAAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHLWSLS*FLSSLT
Trigger: GGTCAAAGAGCTTAAAAAGCAGCTTAAACTCCACAG...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAATCAGGGTGTTAGACTaGAGCAAGCTCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKIRVLD*SKLSGR
Trigger: CCGACCTGAGAGCTTGCTGCAGTCTAACACCCTGAT...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTACTGGGGCACAGGGCTaGAAAGGAAGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTTGAQG*KGSIRV
Trigger: CACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGT...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAACTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLELIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGAAAAGCTTCCTCTTaGTCACAGGAGAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTRKASS*SQEKSS
Trigger: TGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAGAAAAGCTTCCTCTTaGTCACAGGAGAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRRKASS*SQEKSS
Trigger: TGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGTGGCAGAGGAGACATaGAGGGAGTCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKVAEET*RESYPQ
Trigger: CTGTGGATATGACTCCCTGCATGTCTCCTCTGCCAC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACTCTCTTCCTGTATCTaGCCCAAGCCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKLSSCI*PKPGFS
Trigger: AGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTCTCTCTTCCTGTATCTaGCCCAAGCCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTLSSCI*PKPGFS
Trigger: AGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAG...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGGCAGCACAAGTGGCTaGTGTCCCTCGGTGGAATAC +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCGSTSG*CPSVEY
Trigger: GTATTCCACCGAGGGACAGCAGCCACTTGTGCTGCC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACCACAGCTCCTCTGTCTaGTGTTTGCGAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNHSSSV*CLRVLL
Trigger: CAACAGGACTCGCAAACAGCAGACAGAGGAGCTGTG...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGCCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMPVLQQ*CSHCGA
Trigger: GGCACCACAATGGGAGCAGCATTGCTGGAGGACTGG...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAGGAGCTCTGTCACCAGGTTGTATTTTCTaGATCCGAAACCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LNSGGCTSRCYSLEGALSPGCIF*IRNQKA
Trigger: AGCTTTCTGGTTTCGGATCCAGAAAATACAACCTGG...TGACAGAGCTCCTTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGAGAATAATGTGCAAGTaGCTTCTTCCCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTRIMCK*LLPCPG
Trigger: GCCAGGACAGGGAAGAAGCCACTTGCACATTATTCT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACAGAATAATGTGCAAGTaGCTTCTTCCCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNRIMCK*LLPCPG
Trigger: GCCAGGACAGGGAAGAAGCCACTTGCACATTATTCT...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGTGCAGGCTCCTCTGTaGTCTTCATGTCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVVQAPL*SSCLIP
Trigger: TGGGATCAGACATGAAGACCACAGAGGAGCCTGCAC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTGTGCAGGCTCCTCTGTaGTCTTCATGTCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTVQAPL*SSCLIP
Trigger: TGGGATCAGACATGAAGACCACAGAGGAGCCTGCAC...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGGCATTGAGACTTCTGTaGGTGAGGAACTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMALRLL*VRNSGV
Trigger: CACTCCTGAGTTCCTCACCCACAGAAGTCTCAATGC...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACATCCTCTTCTGGCAGTaGCTACAAGCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNILFWQ*LQAICQ
Trigger: CTGGCATATTGCTTGTAGCCACTGCCAGAAGAGGAT...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLETWLVS*VYGPAS
Trigger: TGAAGCTGGACCATACACCCATGACACTAACCATGT...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCSFNKT*LVSWVY
Trigger: ATACACCCATGACACTAACCATGTTTTGTTAAAGCT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCACTTGGAGTAGAAAAATaGCTCAGAGGATATCACAAC +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPLGVEK*LRGYHN
Trigger: GTTGTGATATCCTCTGAGCCATTTTTCTACTCCAAG...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATTGTCCACCTGTTTTTaGAGCCTGACTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTLSTCF*SLTCSK
Trigger: TTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTCTTCTGTGAGGCACTaGCTCCTGTCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTSSVRH*LLSLLS
Trigger: AGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAAGGACAGCAGGTCCTaGGCAGTCAGGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGKDSRS*AVRRST
Trigger: TGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTAAGGACAGCAGGTCCTaGGCAGTCAGGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCKDSRS*AVRRST
Trigger: TGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTT...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLEVSHTN*VPLRSS
Trigger: AGAAGACCTGAGTGGGACCCAATTTGTATGTGAGAC...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAAGGAGGGTTGTGGTCTaGAGCAGCATCCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKRRVVV*SSIQGK
Trigger: CTTACCTTGGATGCTGCTCCAGACCACAACCCTCCT...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTTATTCACTTGAAGGAGCTCTGTCACAACCTGCAGGATATTGTAATTGTGTTTCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: VIHLKELCHNLQDIVIVFLQGGL*SGAASK
Trigger: CTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAG...AAACACAATTACAATATCCTGCAGGTTGTGACAGAGCTCCTTCAAGTGAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCTGCTGTCCCTCGGTaGAATACAGCTGTAATTCCC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKAAVPR*NTAVIP
Trigger: GGGAATTACAGCTGTATTCCACCGAGGGACAGCAGC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTGGCTCTCCCTCTCTaGGAGTCTCTCTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCLALPL*ESLSSL
Trigger: GAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAG...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTTTGTGGTGCCTTGAGTaGTCACAGCTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVLWCLE*SQLLCL
Trigger: CAGACAGAGGAGCTGTGACCACTCAAGGCACCACAA...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGGGCCATCAGGGCTGTaGTCTGATCTTCAGAAACGA +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVGPSGL*SDLQKR
Trigger: TCGTTTCTGAAGATCAGACCACAGCCCTGATGGCCC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGGCAAATTTCATCTGTaGGGACCTCTGCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKGKFHL*GPLPAR
Trigger: CCTTGCAGGCAGAGGTCCCCACAGATGAAATTTGCC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
3UTR CAA 72 bp ACACCCGACCTTACTGAGATGAGTATTTGCACATGCTaGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: TPDLTEMSICTC*SFQSTVTVSKR
Trigger: CCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CAA 72 bp TCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTaGAAGGAGCTCTGTCACAACCTGCAGGATATTGTA +
Preference number: 4 (lower is better)
Translates to: SIAVAVPVVVIH*KELCHNLQDIV
Trigger: TACAATATCCTGCAGGTTGTGACAGAGCTCCTTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAACTTGCATCTGTAGCTaGTTTCCTTGCTTAATGTTA +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPTCICS*FPCLML
Trigger: TAACATTAAGCAAGGAAATCAGCTACAGATGCAAGT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTTGTGGTCTTCATGTCTaGTCCCAAGACTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVCGLHV*SQDSHQ
Trigger: CTGGTGAGAGTCTTGGGATCAGACATGAAGACCACA...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTGTGGTCTTCATGTCTaGTCCCAAGACTCTCACCAG +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNCGLHV*SQDSHQ
Trigger: CTGGTGAGAGTCTTGGGATCAGACATGAAGACCACA...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACGGGGACTTGGGACTCTaGAGTCCATGGATTGAATTC +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNGDLGL*SPWIEF
Trigger: GAATTCAATCCATGGACTTCAGAGTCCCAAGTCCCC...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTNCWPL*ERRQCE
Trigger: TTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTT...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGNCWPL*ERRQCE
Trigger: TTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACGAGGAAGCAGAAGACTaGCTTTGGACTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNEEAED*LWTSSS
Trigger: AGATGAAGAAGTCCAAAGTCAGTCTTCTGCTTCCTC...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGGAGGAAGCAGAAGACTaGCTTTGGACTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTEEAED*LWTSSS
Trigger: AGATGAAGAAGTCCAAAGTCAGTCTTCTGCTTCCTC...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCTCTTCATATTCACCTTaGCTATTGATGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSSSYSP*LLMDIS
Trigger: GGAGATATCCATCAATAGTCAAGGTGAATATGAAGA...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAGGAGCTCTGTCACACATTTTTGGGGAGTaGTTCATCTACAACATGGTA +
Preference number: 4 (lower is better)
Translates to: LNSGGCTSRCYSLEGALSHIFGE*FIYNMV
Trigger: TACCATGTTGTAGATGAAGCACTCCCCAAAAATGTG...TGACAGAGCTCCTTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACAGGACAAGCTTCTCCTaGAACCTCTGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNRTSFS*NLCSSF
Trigger: GAAACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCT...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGTCAGCCCGCAACCTTTaGTTTTCTGCTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTSARNL*FSAFTK
Trigger: CTTTGTGAAAGCAGAAAAGCAAAGGTTGCGGGCTGA...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGCTGTGGAGTTTAAGCTaGTTTTTAAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRLWSLS*FLSSLT
Trigger: GGTCAAAGAGCTTAAAAAGCAGCTTAAACTCCACAG...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGCTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTLIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACCCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCVLQQC*SHCGAL
Trigger: CAAGGCACCACAATGGGAGCAGCATTGCTGGAGGAC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTAGCCTTAGGTTCAGCTaGCTGTCGCAGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTSLRFS*LSQNPI
Trigger: AATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCT...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAGTTAGCCATCTTAAGTaGTTCTTCATATTCACCTTG +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPVSHLK*FFIFTL
Trigger: CAAGGTGAATATGAAGAAGCACTTAAGATGGCTAAC...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCGCTTCATCTACAACATaGTACCCTTCGTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLASSTT*YPSWTC
Trigger: GCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGC...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTACKPI*GLVLRL
Trigger: CAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGC...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACGCATTGAGACTTCTGTaGGTGAGGAACTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNALRLL*VRNSGV
Trigger: CACTCCTGAGTTCCTCACCCACAGAAGTCTCAATGC...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGATCCTCTTCTGGCAGTaGCTACAAGCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMILFWQ*LQAICQ
Trigger: CTGGCATATTGCTTGTAGCCACTGCCAGAAGAGGAT...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACAGTGTCATGGGTGTATaGTCCAGCTTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNSVMGV*SSFTIF
Trigger: GAAGATTGTGAAGCTGGACCATACACCCATGACACT...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSSFNKT*LVSWVY
Trigger: ATACACCCATGACACTAACCATGTTTTGTTAAAGCT...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACGAGGAGCGGAATACTTaGAGTAGAAAAATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNEERNT*SRKMAQ
Trigger: CTGAGCCATTTTTCTACTCCAAGTATTCCGCTCCTC...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TATTGTAATTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCGAGGAGCGGAATACTTaGAGTAGAAAAATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: YCNCVFSAALGSAACRRIEERNT*SRKMAQ
Trigger: CTGAGCCATTTTTCTACTCCAAGTATTCCGCTCCTC...GATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAATTACAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCECWHN*GTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTTATTCACTTGAAGGAGCTCTGTCACAACCTGCAGGATATTGTAATTGTGTTTTGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGA +
Preference number: 4 (lower is better)
Translates to: VIHLKELCHNLQDIVIVFCPLQG*SDELHR
Trigger: TCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACA...AAACACAATTACAATATCCTGCAGGTTGTGACAGAGCTCCTTCAAGTGAATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACACTCTCTCCAATTCTTaGACAATGTTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHTLSNS*TMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGT...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACACAGGGGTGTTGTGTaGCACTCTCTCCAATTCTTG +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKHRGVV*HSLQFL
Trigger: CAAGAATTGGAGAGAGTGCCACACAACACCCCTGTG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNVSHTN*VPLRSS
Trigger: AGAAGACCTGAGTGGGACCCAATTTGTATGTGAGAC...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACTCTTCCTCAACAATGTaGACAATCTCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNSSSTM*TISSLS
Trigger: TGAGAGGGAGGAGATTGTCCACATTGTTGAGGAAGA...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TATTGTAATTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCTCTTCCTCAACAATGTaGACAATCTCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: YCNCVFSAALGSAACRRISSSTM*TISSLS
Trigger: TGAGAGGGAGGAGATTGTCCACATTGTTGAGGAAGA...GATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAATTACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCTGTGCAGTGACTGGTaGCCCAGAAAACAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGLCSDW*PRKQGL
Trigger: AAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACAG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACAGCTTTCCTCTTTGCTaGTACAGTGGAATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNSFPLC*YSGIRR
Trigger: CCTCCTGATTCCACTGTATCAGCAAAGAGGAAAGCT...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATCTTCATATTCACCTTaGCTATTGATGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTSSYSP*LLMDIS
Trigger: GGAGATATCCATCAATAGTCAAGGTGAATATGAAGA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGTTAGCCATCTTAAGTaGTTCTTCATATTCACACTG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTVSHLK*FFIFTL
Trigger: CAGTGTGAATATGAAGAAGCACTTAAGATGGCTAAC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071537.13
CDS-3UTR GCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTGGCTACAAGCAATATaGCAGCTGAACTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMWLQAI*QLNWFS
Trigger: AGAGAACCAGTTCAGCTGGCATATTGCTTGTAGCCA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTCAGCCCGCAACCTTTaGTTTTCTGCTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMSARNL*FSAFTK
Trigger: CTTTGTGAAAGCAGAAAAGCAAAGGTTGCGGGCTGA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAACTGTGGAGTTTAAGCTaGTTTTTAAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLELWSLS*FLSSLT
Trigger: GGTCAAAGAGCTTAAAAAGCAGCTTAAACTCCACAG...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTATCAGGGTGTTAGACTaGAGCAAGCTCTCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTIRVLD*SKLSGR
Trigger: CCGACCTGAGAGCTTGCTGCAGTCTAACACCCTGAT...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGCTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMLIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGTGGCAGAGGAGACATaGAGGGAGTCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCVAEET*RESYPQ
Trigger: CTGTGGATATGACTCCCTGCATGTCTCCTCTGCCAC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGGTGGCAGAGGAGACATaGAGGGAGTCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMVAEET*RESYPQ
Trigger: CTGTGGATATGACTCCCTGCATGTCTCCTCTGCCAC...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCTCTCTTCCTGTATCTaGCCCAAGCCTGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGLSSCI*PKPGFS
Trigger: AGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCACAGCTCCTCTGTCTaGTGTTTGCGAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGHSSSV*CLRVLL
Trigger: CAACAGGACTCGCAAACAGCAGACAGAGGAGCTGTG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTCACAGCTCCTCTGTCTaGTGTTTGCGAGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTHSSSV*CLRVLL
Trigger: CAACAGGACTCGCAAACAGCAGACAGAGGAGCTGTG...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGTTAGCCATCTTAAGTaGTTCTTCATATTCACCTTG +
Preference number: 4 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRVSHLK*FFIFTL
Trigger: CAAGGTGAATATGAAGAAGCACTTAAGATGGCTAAC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAGTTAGCCATCTTAAGTaGTTCTTCATATTCACCTTG +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTVSHLK*FFIFTL
Trigger: CAAGGTGAATATGAAGAAGCACTTAAGATGGCTAAC...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CTAGAGAAAGAAAGAAATCTGGTGCTCAGATCATTTAACAGGACCCCACTGCTTAGGATGGAGAGAAACTaGATAGCTTCAACATCAGCC +
Preference number: 4 (lower is better)
Translates to: LEKERNLVLRSFNRTPLLRMERN*IASTSA
Trigger: GGCTGATGTTGAAGCTATGCAGTTTCTCTCCATCCT...AAGCAGTGGGGTCCTGTTAAATGATCTGAGCACCAGATTTCTTTCTTTCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136185.2
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGCTTCATCTACAACATaGTACCCTTCGTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVASSTT*YPSWTC
Trigger: GCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGTCCTGGCAGCCGCTTaGTTTTCTACCACATTTTTG +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVVLAAA*FSTTFL
Trigger: CAAAAATGTGGTAGAAAACCAAGCGGCTGCCAGGAC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTAGAATAATGTGCAAGTaGCTTCTTCCCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTRIMCK*LLPCPG
Trigger: GCCAGGACAGGGAAGAAGCCACTTGCACATTATTCT...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTAGAATAATGTGCAAGTaGCTTCTTCCCTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVRIMCK*LLPCPG
Trigger: GCCAGGACAGGGAAGAAGCCACTTGCACATTATTCT...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGTGCAGGCTCCTCTGTaGTCTTCATGTCTGATCCCA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGVQAPL*SSCLIP
Trigger: TGGGATCAGACATGAAGACCACAGAGGAGCCTGCAC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTATCCTCTTCTGGCAGTaGCTACAAGCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTILFWQ*LQAICQ
Trigger: CTGGCATATTGCTTGTAGCCACTGCCAGAAGAGGAT...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: RREFCPAELKTVFLPFIPSFNKT*LVSWVY
Trigger: ATACACCCATGACACTAACCATGTTTTGTTAAAGCT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVSFNKT*LVSWVY
Trigger: ATACACCCATGACACTAACCATGTTTTGTTAAAGCT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACTTGTCCACCTGTTTTTaGAGCCTGACTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNLSTCF*SLTCSK
Trigger: TTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAA...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCTCTTCTGTGAGGCACTaGCTCCTGTCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGSSVRH*LLSLLS
Trigger: AGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGA...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAACTCTCTCCAATTCTTaGACAATGTTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTTLSNS*TMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMVSHTN*VPLRSS
Trigger: AGAAGACCTGAGTGGGACCCAATTTGTATGTGAGAC...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTTTGTGGTGCCTTGAGTaGTCACAGCTCCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTLWCLE*SQLLCL
Trigger: CAGACAGAGGAGCTGTGACCACTCAAGGCACCACAA...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTAAGCAATATGCCAGCTaGACTGGTTCTCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVKQYAS*TGSLAK
Trigger: TTTTGCCAGAGAACCAGTTCAGCTGGCATATTGCTT...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAAAGCAATATGCCAGCTaGACTGGTTCTCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKKQYAS*TGSLAK
Trigger: TTTTGCCAGAGAACCAGTTCAGCTGGCATATTGCTT...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGGGGACTTGGGACTCTaGAGTCCATGGATTGAATTC +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGGDLGL*SPWIEF
Trigger: GAATTCAATCCATGGACTTCAGAGTCCCAAGTCCCC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGGGGACTTGGGACTCTaGAGTCCATGGATTGAATTC +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCGDLGL*SPWIEF
Trigger: GAATTCAATCCATGGACTTCAGAGTCCCAAGTCCCC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGAGGAAGCAGAAGACTaGCTTTGGACTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKEEAED*LWTSSS
Trigger: AGATGAAGAAGTCCAAAGTCAGTCTTCTGCTTCCTC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTAGGACAAGCTTCTCCTaGAACCTCTGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVRTSFS*NLCSSF
Trigger: GAAACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCT...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACAGGACAAGCTTCTCCTaGAACCTCTGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNRTSFS*NLCSSF
Trigger: GAAACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCT...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTAGGACAAGCTTCTCCTaGAACCTCTGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTRTSFS*NLCSSF
Trigger: GAAACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCT...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAATGGCTACAAGCAATATaGCAGCTGAACTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKWLQAI*QLNWFS
Trigger: AGAGAACCAGTTCAGCTGGCATATTGCTTGTAGCCA...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTGGCTACAAGCAATATaGCAGCTGAACTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNWLQAI*QLNWFS
Trigger: AGAGAACCAGTTCAGCTGGCATATTGCTTGTAGCCA...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTCAGCCCGCAACCTTTaGTTTTCTGCTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTSARNL*FSAFTK
Trigger: CTTTGTGAAAGCAGAAAAGCAAAGGTTGCGGGCTGA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCATCCACAAATGCTaGACTGAGTGTTGGCATAAC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVLIHKC*TECWHN
Trigger: GTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAAT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGPVPSV*FVTSPN
Trigger: ATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACAGGAAGAATCCTTTCTaGAGAATCCAGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNRKNPF*RIQAAQ
Trigger: TTGTGCTGCCTGGATTCTGCAGAAAGGATTCTTCCT...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTAGGAAGAATCCTTTCTaGAGAATCCAGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVRKNPF*RIQAAQ
Trigger: TTGTGCTGCCTGGATTCTGCAGAAAGGATTCTTCCT...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAGTTAGCCATCTTAAGTaGTTCTTCATATTCACCTTG +
Preference number: 4 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLEVSHLK*FFIFTL
Trigger: CAAGGTGAATATGAAGAAGCACTTAAGATGGCTAAC...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAGAAGAACATTGCTCTaGTGCAGGCTCCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGRRTLL*CRLLCG
Trigger: ACCACAGAGGAGCCTGCACCAGAGCAATGTTCTTCT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGACKPI*GLVLRL
Trigger: CAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACAGTGTCATGGGTGTATaGTCCAGCTTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNSVMGV*SSFTIF
Trigger: GAAGATTGTGAAGCTGGACCATACACCCATGACACT...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAAGTGTCATGGGTGTATaGTCCAGCTTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKSVMGV*SSFTIF
Trigger: GAAGATTGTGAAGCTGGACCATACACCCATGACACT...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNTWLVS*VYGPAS
Trigger: TGAAGCTGGACCATACACCCATGACACTAACCATGT...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTGAGGAGCGGAATACTTaGAGTAGAAAAATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTEERNT*SRKMAQ
Trigger: CTGAGCCATTTTTCTACTCCAAGTATTCCGCTCCTC...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTTGTCCACCTGTTTTTaGAGCCTGACTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMLSTCF*SLTCSK
Trigger: TTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKVSHTN*VPLRSS
Trigger: AGAAGACCTGAGTGGGACCCAATTTGTATGTGAGAC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAATCTTCCTCAACAATGTaGACAATCTCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKSSSTM*TISSLS
Trigger: TGAGAGGGAGGAGATTGTCCACATTGTTGAGGAAGA...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACACTTGCATCTGTAGCTaGTTTCCTTGCTTAATGTTA +
Preference number: 4 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNTCICS*FPCLML
Trigger: TAACATTAAGCAAGGAAATCAGCTACAGATGCAAGT...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACCCAGGTTGTATTTTCTaGATCCGAAACCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNPGCIF*IRNQKA
Trigger: AGCTTTCTGGTTTCGGATCCAGAAAATACAACCTGG...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGGCTTCATCTACAACATaGTACCCTTCGTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMASSTT*YPSWTC
Trigger: GCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGC...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGCTTCATCTACAACATaGTACCCTTCGTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGASSTT*YPSWTC
Trigger: GCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTGTCCTGGCAGCCGCTTaGTTTTCTACCACATTTTTG +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTVLAAA*FSTTFL
Trigger: CAAAAATGTGGTAGAAAACCAAGCGGCTGCCAGGAC...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGTCCTGGCAGCCGCTTaGTTTTCTACCACATTTTTG +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGVLAAA*FSTTFL
Trigger: CAAAAATGTGGTAGAAAACCAAGCGGCTGCCAGGAC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGCTGAACTGGTTCTCTaGCAAAAACAGGGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCAELVL*QKQGFL
Trigger: GAGGAAACCCTGTTTTTGCCAGAGAACCAGTTCAGC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTATCCTCTTCTGGCAGTaGCTACAAGCAATATGCCAG +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTILFWQ*LQAICQ
Trigger: CTGGCATATTGCTTGTAGCCACTGCCAGAAGAGGAT...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp GTTATTCACTTGAAGGAGCTCTGTCACAACCTGCAGGATATTGTAATTGTGTTTACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VIHLKELCHNLQDIVIVFTWLVS*VYGPAS
Trigger: TGAAGCTGGACCATACACCCATGACACTAACCATGT...AAACACAATTACAATATCCTGCAGGTTGTGACAGAGCTCCTTCAAGTGAATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVNKLGS*LKMSPI
Trigger: GATGGGACTCATCTTCAGCCAGGAACCAAGTTTATT...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTCTCTCCAATTCTTaGACAATGTTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTTLSNS*TMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GTTATTCACTTGAAGGAGCTCTGTCACAACCTGCAGGATATTGTAATTGTGTTTTCTTCCTCAACAATGTaGACAATCTCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VIHLKELCHNLQDIVIVFSSSTM*TISSLS
Trigger: TGAGAGGGAGGAGATTGTCCACATTGTTGAGGAAGA...AAACACAATTACAATATCCTGCAGGTTGTGACAGAGCTCCTTCAAGTGAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGAAGCAATATGCCAGCTaGACTGGTTCTCTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMKQYAS*TGSLAK
Trigger: TTTTGCCAGAGAACCAGTTCAGCTGGCATATTGCTT...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGAGGAAGCAGAAGACTaGCTTTGGACTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGEEAED*LWTSSS
Trigger: AGATGAAGAAGTCCAAAGTCAGTCTTCTGCTTCCTC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTCTTCATATTCACCTTaGCTATTGATGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMSSYSP*LLMDIS
Trigger: GGAGATATCCATCAATAGTCAAGGTGAATATGAAGA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGAGGACAAGCTTCTCCTaGAACCTCTGTTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMRTSFS*NLCSSF
Trigger: GAAACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCT...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCTGGCTACAAGCAATATaGCAGCTGAACTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGWLQAI*QLNWFS
Trigger: AGAGAACCAGTTCAGCTGGCATATTGCTTGTAGCCA...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGTCAGCCCGCAACCTTTaGTTTTCTGCTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMSARNL*FSAFTK
Trigger: CTTTGTGAAAGCAGAAAAGCAAAGGTTGCGGGCTGA...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAGGAAGAATCCTTTCTaGAGAATCCAGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGRKNPF*RIQAAQ
Trigger: TTGTGCTGCCTGGATTCTGCAGAAAGGATTCTTCCT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTAGGAAGAATCCTTTCTaGAGAATCCAGGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTRKNPF*RIQAAQ
Trigger: TTGTGCTGCCTGGATTCTGCAGAAAGGATTCTTCCT...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTATATGCCAGCTGAACTaGTTCTCTGGCAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCICQLN*FSGKNR
Trigger: CCTGTTTTTGCCAGAGAACCAGTTCAGCTGGCATAT...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTAGTGTCATGGGTGTATaGTCCAGCTTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCSVMGV*SSFTIF
Trigger: GAAGATTGTGAAGCTGGACCATACACCCATGACACT...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAGTGTCATGGGTGTATaGTCCAGCTTCACAATCTTC +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGSVMGV*SSFTIF
Trigger: GAAGATTGTGAAGCTGGACCATACACCCATGACACT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGTWLVS*VYGPAS
Trigger: TGAAGCTGGACCATACACCCATGACACTAACCATGT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAACTTGGAGTAGAAAAATaGCTCAGAGGATATCACAAC +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKLGVEK*LRGYHN
Trigger: GTTGTGATATCCTCTGAGCCATTTTTCTACTCCAAG...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTCTCTCCAATTCTTaGACAATGTTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: ARPSESKVFLISKSLRNMTLSNS*TMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGT...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCACTCTCTCCAATTCTTaGACAATGTTTATATCCAGC +
Preference number: 4 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLTLSNS*TMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGT...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCVSHTN*VPLRSS
Trigger: AGAAGACCTGAGTGGGACCCAATTTGTATGTGAGAC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCTCTTCCTCAACAATGTaGACAATCTCCTCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGSSSTM*TISSLS
Trigger: TGAGAGGGAGGAGATTGTCCACATTGTTGAGGAAGA...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CAA 72 bp TTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTaGATCTGCTGTCTTTATGTAGCTATGAGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: FLISKSLRNMTF*ICCLYVAMRLA
Trigger: CGCAAGCCTCATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTACTTGCATCTGTAGCTaGTTTCCTTGCTTAATGTTA +
Preference number: 4 (lower is better)
Translates to: RPSESKVFLISKSLRNMTTCICS*FPCLML
Trigger: TAACATTAAGCAAGGAAATCAGCTACAGATGCAAGT...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTCTTCATATTCACCTTaGCTATTGATGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNSSYSP*LLMDIS
Trigger: GGAGATATCCATCAATAGTCAAGGTGAATATGAAGA...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTATTCTCATCCACAAATaGTGCACTGAGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCILIHK*CTECWH
Trigger: ATGCCAACACTCAGTGCAGCATTTGTGGATGAGAAT...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGATTCTCATCCACAAATaGTGCACTGAGTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMILIHK*CTECWH
Trigger: ATGCCAACACTCAGTGCAGCATTTGTGGATGAGAAT...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTAGAAAAGCTTCCTCTTaGTCACAGGAGAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTRKASS*SQEKSS
Trigger: TGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCT...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCCAGGTTGTATTTTCTaGATCCGAAACCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGPGCIF*IRNQKA
Trigger: AGCTTTCTGGTTTCGGATCCAGAAAATACAACCTGG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGCCAGGTTGTATTTTCTaGATCCGAAACCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMPGCIF*IRNQKA
Trigger: AGCTTTCTGGTTTCGGATCCAGAAAATACAACCTGG...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTCCAGGTTGTATTTTCTaGATCCGAAACCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTPGCIF*IRNQKA
Trigger: AGCTTTCTGGTTTCGGATCCAGAAAATACAACCTGG...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGTTGTCCACCTGTTTTTaGAGCCTGACTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMLSTCF*SLTCSK
Trigger: TTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAA...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTTTGTCCACCTGTTTTTaGAGCCTGACTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCLSTCF*SLTCSK
Trigger: TTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAA...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCTTGTCCACCTGTTTTTaGAGCCTGACTTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGLSTCF*SLTCSK
Trigger: TTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAA...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMNKLGS*LKMSPI
Trigger: GATGGGACTCATCTTCAGCCAGGAACCAAGTTTATT...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATC +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGNKLGS*LKMSPI
Trigger: GATGGGACTCATCTTCAGCCAGGAACCAAGTTTATT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCACATTTTTGGGGAGTaGTTCATCTACAACATGGTA +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGHIFGE*FIYNMV
Trigger: TACCATGTTGTAGATGAAGCACTCCCCAAAAATGTG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCTGTGGAGTTTAAGCTaGTTTTTAAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGLWSLS*FLSSLT
Trigger: GGTCAAAGAGCTTAAAAAGCAGCTTAAACTCCACAG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR GCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTCTGTGGAGTTTAAGCTaGTTTTTAAGCTCTTTGACC +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTLWSLS*FLSSLT
Trigger: GGTCAAAGAGCTTAAAAAGCAGCTTAAACTCCACAG...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKSFNKT*LVSWVY
Trigger: ATACACCCATGACACTAACCATGTTTTGTTAAAGCT...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CCA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTCTTGGAGTAGAAAAATaGCTCAGAGGATATCACAAC +
Preference number: 4 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTLGVEK*LRGYHN
Trigger: GTTGTGATATCCTCTGAGCCATTTTTCTACTCCAAG...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
3UTR CAA 72 bp CCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTaGAGGAACATGACTTTCTTGATCTGCTGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PSESKVFLISKS*RNMTFLICCLY
Trigger: ATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR TCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGACTTGCATCTGTAGCTaGTTTCCTTGCTTAATGTTA +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMTCICS*FPCLML
Trigger: TAACATTAAGCAAGGAAATCAGCTACAGATGCAAGT...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR TCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGTCTTCATATTCACCTTaGCTATTGATGGATATCTCC +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMSSYSP*LLMDIS
Trigger: GGAGATATCCATCAATAGTCAAGGTGAATATGAAGA...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGGTTAGCCATCTTAAGTaGTTCTTCATATTCACCTTG +
Preference number: 4 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMVSHLK*FFIFTL
Trigger: CAAGGTGAATATGAAGAAGCACTTAAGATGGCTAAC...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR GCA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGTTAGCCATCTTAAGTaGTTCTTCATATTCACCTTG +
Preference number: 4 (lower is better)
Translates to: KVFLISKSLRNMTFLICCVSHLK*FFIFTL
Trigger: CAAGGTGAATATGAAGAAGCACTTAAGATGGCTAAC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CCA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGSFNKT*LVSWVY
Trigger: ATACACCCATGACACTAACCATGTTTTGTTAAAGCT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp CTGTGGCTGGCTCTCCCTCTCTGGGAGTCTCTCTCTAGCCTCAGTTaGTTCCAGCCCAGACTCGATCCCAGGTTCGCCTTCAGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: LWLALPLWESLSSLS*FQPRLDPRFAFSPS
Trigger: CGAGGGGCTGAAGGCGAACCTGGGATCGAGTCTGGGCTGGAACCAACTGAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGCCAGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: QGLPPTLNDSRETTSERQCLQGG*WSGAAS
Trigger: GGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCA...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp GTGAATCCACTCCTGATGACTCACACTGTCCACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTCCTGCCACCTCGGGGACTAGAGGCA +
Preference number: 5 (lower is better)
Translates to: VNPLLMTHTVHKGRS*TMLLEVLPPRGLEA
Trigger: TGCCTCTAGTCCCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTGGACAGTGTGAGTCATCAGGAGTGGATTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS GCA 90 bp CAGAGGCAGCAACAGACAAAGCCCCCTTCACCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCCTTGAGTGGTCACAGCTCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: QRQQQTKPPSPVLQQ*CSHCGALSGHSSSV
Trigger: GACAGAGGAGCTGTGACCACTCAAGGCACCACAATGGGAGCAGCATTGCTGGAGGACTGGTGAAGGGGGCTTTGTCTGTTGCTGCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS GCA 90 bp CCTCTGGGCTCTCCTCTGATGTCATCAGGGGCTGGGGGAACTTCGTaGATGGTAGCTGGTGAATCCACTCCTGGTGAATCCACTCCTGAT +
Preference number: 5 (lower is better)
Translates to: PLGSPLMSSGAGGTS*MVAGESTPGESTPD
Trigger: ATCAGGAGTGGATTCACCAGGAGTGGATTCACCAGCTACCATGCACGAAGTTCCCCCAGCCCCTGATGACATCAGAGGAGAGCCCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS GCA 90 bp CGCGGTCCTTCTTCAGGCAAGGCAAATTTCATCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGGTCTGGAGCAGCATCCAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: RGPSSGKANFICGDL*LQGGLWSGAASKVR
Trigger: CCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGATGAAATTTGCCTTGCCTGAAGAAGGACCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS CCA 90 bp TTTGTGAGAGAGACGCCAGTGCGAAGTGTATGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGACACGACCCCAACGTGGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: FVRETPVRSVCPLQG*SDELHRHDPNVASL
Trigger: AAGGCTGGCCACGTTGGGGTCGTGTCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACATACACTTCGCACTGGCGTCTCTCTCACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp CAGCTCAAAGGACAGCAGGTCCTGGGCAGTCAGGAGGTCCACAGATaGAATGTACAGCTCCCTTTCACTGGCAGCGCGTCTTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: QLKGQQVLGSQEVHR*NVQLPFTGSASCLL
Trigger: CAGAAGACAAGACGCGCTGCCAGTGAAAGGGAGCTGTACATTCCATCTGTGGACCTCCTGACTGCCCAGGACCTGCTGTCCTTTGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVIWGLV*RLVCVT
Trigger: TGTGACACAGACCAGCCTCAAGACAAGCCCCCAGAT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLCLQGG*WSGAAS
Trigger: GGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CCCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTGTTTGCGAGTCCTGTaGAGCCTCTGGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PECLLSFQVPARPSESKVCLRVL*SLWALL
Trigger: GAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAACA...CACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTTCCCATTGTGGTGCCTaGAGTGGTCACAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVSHCGA*SGHSSS
Trigger: AGAGGAGCTGTGACCACTCAAGGCACCACAATGGGA...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS TCA 90 bp TGGAATGTACAGCTCCCTTTCACTGGCAGCGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCCTTCTGTCTGCTTTGTCACCTCACC +
Preference number: 5 (lower is better)
Translates to: WNVQLPFTGSASCLL*GTGSCPFCLLCHLT
Trigger: GGTGAGGTGACAAAGCAGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGCGCTGCCAGTGAAAGGGAGCTGTACATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTGTTTGCGAGTCCTGTaGAGCCTCTGGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLCLRVL*SLWALL
Trigger: GAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAACA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS TCA 90 bp ACTATGATACTGCACCAAACCCGAGGCCCAAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAAGTGTATGTCCCCTCCAAGGTTGGA +
Preference number: 5 (lower is better)
Translates to: TMILHQTRGPNCWPL*ERRQCEVYVPSKVG
Trigger: TCCAACCTTGGAGGGGACATACACTTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTTTGGGCCTCGGGTTTGGTGCAGTATCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS GCA 90 bp ATTGTGGTGCCTCCTCTGATGTCATCAGGGGCTGGGGGAACTTCGTaGATGGTAGCTGGTGAATCCACTCCTGGTGAATCCACTCCTGAT +
Preference number: 5 (lower is better)
Translates to: IVVPPLMSSGAGGTS*MVAGESTPGESTPD
Trigger: ATCAGGAGTGGATTCACCAGGAGTGGATTCACCAGCTACCATGCACGAAGTTCCCCCAGCCCCTGATGACATCAGAGGAGGCACCACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATATCCACAGGGGTGTaGTGTGGCACTCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVISTGV*CGTLSN
Trigger: ATTGGAGAGAGTGCCACACAACACCCCTGTGGATAT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TGTGCAGTGACTGGTGGCCCAGAAAACAGGGCCTTGTACGCAGAGGCAGCAACAATATCCACAGGGGTGTaGTGTGGCACTCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: CAVTGGPENRALYAEAATISTGV*CGTLSN
Trigger: ATTGGAGAGAGTGCCACACAACACCCCTGTGGATAT...TGTTGCTGCCTCTGCGTACAAGGCCCTGTTTTCTGGGCCACCAGTCACTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: QGLPPTLNDSRETTSERQSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCATGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: RREFCPAELKTVFLPFIPCLQGG*WSGAAS
Trigger: GGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCA...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVCLQGG*WSGAAS
Trigger: GGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCA...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCTGTTTGCGAGTCCTGTaGAGCCTCTGGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSCLRVL*SLWALL
Trigger: GAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAACA...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTCCTCTGTCTGCTGTTaGCGAGTCCTGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLSSVCC*RVLLSL
Trigger: GAGGCTCAACAGGACTCGCAAACAGCAGACAGAGGA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTTCCTCTGTCTGCTGTTaGCGAGTCCTGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCSSVCC*RVLLSL
Trigger: GAGGCTCAACAGGACTCGCAAACAGCAGACAGAGGA...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGCAATGCTGCTCCCATaGTGGTGCCTTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLAMLLP*WCLEWS
Trigger: TGACCACTCAAGGCACCACAATGGGAGCAGCATTGC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS CCA 90 bp AGCTGTAATTCCCTCTGTGGGGACCTCTGCCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAGGTAAGGGATCGAATTACAGTCTCA +
Preference number: 5 (lower is better)
Translates to: SCNSLCGDLCLQGGL*SGAASKVRDRITVS
Trigger: TGAGACTGTAATTCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAGGGAATTACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCTTTCACAAAGTTCTaGTCCACCTGTTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: QGLPPTLNDSRETTSERQAFTKF*STCFWS
Trigger: GCTCCAAAAACAGGTGGACAAGAACTTTGTGAAAGC...CTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTTTGGACTTCTTCATCTaGGACTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVLDFFI*DFLLFL
Trigger: GAGGAAGAGGAGGAAGTCCAAGATGAAGAAGTCCAA...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCTGTTTGCGAGTCCTGTaGAGCCTCTGGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVCLRVL*SLWALL
Trigger: GAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAACA...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCTGTTTGCGAGTCCTGTaGAGCCTCTGGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSCLRVL*SLWALL
Trigger: GAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAACA...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCTCCCATTGTGGTGCCTaGAGTGGTCACAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSSHCGA*SGHSSS
Trigger: AGAGGAGCTGTGACCACTCAAGGCACCACAATGGGA...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCGCAATGCTGCTCCCATaGTGGTGCCTTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSAMLLP*WCLEWS
Trigger: TGACCACTCAAGGCACCACAATGGGAGCAGCATTGC...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS GCA 90 bp TCCTGGCTGAAGATGAGTCCCATCAGGCAAATTCTCATCCACAAATaGTGCACTGAGTGTTGGCATAACTGGGGCACAGGGCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: SWLKMSPIRQILIHK*CTECWHNWGTGLQR
Trigger: CCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCATTTGTGGATGAGAATTTGCCTGATGGGACTCATCTTCAGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp CTTCGACCGAAGCAGGGGTCTCAGCTTTCCTCTTTGCTGATACAGTaGAATCCACAGGGGTGTTGTGTGGCACTCTCTCCAATTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LRPKQGSQLSSLLIQ*NPQGCCVALSPILG
Trigger: TCCAAGAATTGGAGAGAGTGCCACACAACACCCCTGTGGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGACCCCTGCTTCGGTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCAACATCAGCCCAGGTaGTATTTTCTGGATCCGAAA +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVQHQPR*YFLDPK
Trigger: TTTCGGATCCAGAAAATACAACCTGGGCTGATGTTG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVIWGLV*RLVCVT
Trigger: TGTGACACAGACCAGCCTCAAGACAAGCCCCCAGAT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTTTTTGGAGCCTGACTaGTTCCAAAGCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLFLEPD*FQSSRQ
Trigger: CTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTGCTTTCACAAAGTTCTaGTCCACCTGTTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVAFTKF*STCFWS
Trigger: GCTCCAAAAACAGGTGGACAAGAACTTTGTGAAAGC...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCEKSSA*LELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTC...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLEKSSA*LELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTTCTCAGCTTTCCTCTTaGCTGATACAGTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVSQLSS*LIQWNQ
Trigger: CTGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGA...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTGTTTGCGAGTCCTGTaGAGCCTCTGGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRCLRVL*SLWALL
Trigger: GAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAACA...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCTCCTCTGTCTGCTGTTaGCGAGTCCTGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVSSVCC*RVLLSL
Trigger: GAGGCTCAACAGGACTCGCAAACAGCAGACAGAGGA...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCGCAATGCTGCTCCCATaGTGGTGCCTTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSAMLLP*WCLEWS
Trigger: TGACCACTCAAGGCACCACAATGGGAGCAGCATTGC...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTTCTCAGCTTTCCTCTTaGCTGATACAGTGGAATCCA +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVSQLSS*LIQWNP
Trigger: TGGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGA...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS GCA 90 bp TGGCTGAAGATGAGTCCCATCAGGCAAATTCTCATCCACAAATGCTaGACTGAGTGTTGGCATAACTGGGGCACAGGGCTGCAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: WLKMSPIRQILIHKC*TECWHNWGTGLQRK
Trigger: CTTCCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCATTTGTGGATGAGAATTTGCCTGATGGGACTCATCTTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp GCTTCTTCCCTGTCCTGGCAGCCGCTTGGTTTTCTACCACATTTTTaGGGAGTGCTTCATCTACAACATGGTACCCTTCGTGGACTTGCA +
Preference number: 5 (lower is better)
Translates to: ASSLSWQPLGFLPHF*GVLHLQHGTLRGLA
Trigger: TGCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGCACTCCCCAAAAATGTGGTAGAAAACCAAGCGGCTGCCAGGACAGGGAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CCA 90 bp AGGCAAATTCTCATCCACAAATGCTGCACTGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGGAAGCATCAGGGTGTTAGACTGCAG +
Preference number: 5 (lower is better)
Translates to: RQILIHKCCTECWHN*GTGLQRKHQGVRLQ
Trigger: CTGCAGTCTAACACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCATTTGTGGATGAGAATTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp AGTCCCATCAGGCAAATTCTCATCCACAAATGCTGCACTGAGTGTTaGCATAACTGGGGCACAGGGCTGCAAAGGAAGCATCAGGGTGTT +
Preference number: 5 (lower is better)
Translates to: SPIRQILIHKCCTEC*HNWGTGLQRKHQGV
Trigger: AACACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCATTTGTGGATGAGAATTTGCCTGATGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp AAGGCAAATTTCATCTGTGGGGACCTCTGCCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAGGTAAGGGATCGAATTACAGTCTCA +
Preference number: 5 (lower is better)
Translates to: KANFICGDLCLQGGL*SGAASKVRDRITVS
Trigger: TGAGACTGTAATTCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGATGAAATTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRIWGLV*RLVCVT
Trigger: TGTGACACAGACCAGCCTCAAGACAAGCCCCCAGAT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATCCTCTGTCTGCTGTTaGCGAGTCCTGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTSSVCC*RVLLSL
Trigger: GAGGCTCAACAGGACTCGCAAACAGCAGACAGAGGA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATCCCATTGTGGTGCCTaGAGTGGTCACAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTSHCGA*SGHSSS
Trigger: AGAGGAGCTGTGACCACTCAAGGCACCACAATGGGA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGCAATGCTGCTCCCATaGTGGTGCCTTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRAMLLP*WCLEWS
Trigger: TGACCACTCAAGGCACCACAATGGGAGCAGCATTGC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCGAATCCACAGGGGTGTaGTGTGGCACTCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSESTGV*CGTLSN
Trigger: ATTGGAGAGAGTGCCACACAACACCCCTGTGGATTC...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS TCA 90 bp CTTCAACATTATCAGGGCTCTCAGAGGAAGGAAAAGGATCCACTATaGTACTGCACCAAACCCGAGGCCCAAACTGCTGGCCTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: LQHYQGSQRKEKDPL*YCTKPEAQTAGLCE
Trigger: CTCACAAAGGCCAGCAGTTTGGGCCTCGGGTTTGGTGCAGTATCATAGTGGATCCTTTTCCTTCCTCTGAGAGCCCTGATAATGTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp AACCACTTGTTCTCGGAACATCTCCAGGTAGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTGGTCTGTGTCACAAGGAGCAGAAGA +
Preference number: 5 (lower is better)
Translates to: NHLFSEHLQVACKPI*GLVLRLVCVTRSRR
Trigger: TCTTCTGCTCCTTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGCTACCTGGAGATGTTCCGAGAACAAGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CCA 90 bp GGAGTCATATCCACAGGGGTGTTGTGTGGCACTCTCTCCAATTCTTaGACAATGTTTATATCCAGCAGCTCAAAGGACAGCAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GVISTGVLCGTLSNS*TMFISSSSKDSRSW
Trigger: CCAGGACCTGCTGTCCTTTGAGCTGCTGGATATAAACATTGTCCAAGAATTGGAGAGAGTGCCACACAACACCCCTGTGGATATGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp ACAGTGGAATCCACAGGGGTGTTGTGTGGCACTCTCTCCAATTCTTaGACAATGTTTATATCCAGCAGCTCAAAGGACAGCAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: TVESTGVLCGTLSNS*TMFISSSSKDSRSW
Trigger: CCAGGACCTGCTGTCCTTTGAGCTGCTGGATATAAACATTGTCCAAGAATTGGAGAGAGTGCCACACAACACCCCTGTGGATTCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS CCA 90 bp AAATTTCATCTGTGGGGACCTCTGCCTGCAAGGAGGGTTGTGGTCTaGAGCAGCATCCAAGGTAAGGGATCGAATTACAGTCTCACATAC +
Preference number: 5 (lower is better)
Translates to: KFHLWGPLPARRVVV*SSIQGKGSNYSLTY
Trigger: GTATGTGAGACTGTAATTCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGATGAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGGCTTTCACAAAGTTCTaGTCCACCTGTTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLAFTKF*STCFWS
Trigger: GCTCCAAAAACAGGTGGACAAGAACTTTGTGAAAGC...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTTTTCCCCACATGAACTaGAGCTTTGTGTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCFPHMN*SFVSVF
Trigger: GAACACAGACACAAAGCTCAAGTTCATGTGGGGAAA...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGTTTCCCCACATGAACTaGAGCTTTGTGTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLFPHMN*SFVSVF
Trigger: GAACACAGACACAAAGCTCAAGTTCATGTGGGGAAA...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GTCCTTTCACCCACACCCGACCTTACTGAGATGAGTATTTGCACATGCTTGTCCGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: VLSPTPDLTEMSICTCLSEKSSA*LELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTC...GGACAAGCATGTGCAAATACTCATCTCAGTAAGGTCGGGTGTGGGTGAAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTCACTCTCTCCAATTCTaGGACAATGTTTATATCCAG +
Preference number: 5 (lower is better)
Translates to: LPPTLNDSRETTSERQAVHSLQF*DNVYIQ
Trigger: CTGGATATAAACATTGTCCAAGAATTGGAGAGAGTG...AACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAATATCCACAGGGGTGTaGTGTGGCACTCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: RREFCPAELKTVFLPFIPISTGV*CGTLSN
Trigger: ATTGGAGAGAGTGCCACACAACACCCCTGTGGATAT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCATATCCACAGGGGTGTaGTGTGGCACTCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVISTGV*CGTLSN
Trigger: ATTGGAGAGAGTGCCACACAACACCCCTGTGGATAT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLCLQGG*WSGAAS
Trigger: GGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGCAAGCAAGGGCTTCCACCCACACTCAATGACAGCAGAGAGACCACCTCTGAGCAGAAGACTGACTTaGGACTTCTTCATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: KASKGFHPHSMTAERPPLSRRLT*DFFILD
Trigger: GTCCAAGATGAAGAAGTCCAAAGTCAGTCTTCTGCT...CAGAGGTGGTCTCTCTGCTGTCATTGAGTGTGGGTGGAAGCCCTTGCTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACTGTTTGCGAGTCCTGTaGAGCCTCTGGGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNCLRVL*SLWALL
Trigger: GAGGAGAGCCCAGAGGCTCAACAGGACTCGCAAACA...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS TCA 90 bp GCTTTTCTGCTTTCACAAAGTTCTTGTCCACCTGTTTTTGGAGCCTaGCTTGTTCCAAAGCAGCAGGCAGACGAGGAGCGGAATACTTGG +
Preference number: 5 (lower is better)
Translates to: AFLLSQSSCPPVFGA*LVPKQQADEERNTW
Trigger: CCAAGTATTCCGCTCCTCGTCTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAAGAACTTTGTGAAAGCAGAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 90 bp GCAGCATCCAAGGTAAGGGATCGAATTACAGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCTTCTGTTTCTTCGACCGAAGCAGGG +
Preference number: 5 (lower is better)
Translates to: AASKVRDRITVSHTN*VPLRSSSVSSTEAG
Trigger: CCCTGCTTCGGTCGAAGAAACAGAAGAAGACCTGAGTGGGACCCAATTTGTATGTGAGACTGTAATTCGATCCCTTACCTTGGATGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTIWGLV*RLVCVT
Trigger: TGTGACACAGACCAGCCTCAAGACAAGCCCCCAGAT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTTTTTGGAGCCTGACTaGTTCCAAAGCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRFLEPD*FQSSRQ
Trigger: CTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAA...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATTTTTGGAGCCTGACTaGTTCCAAAGCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTFLEPD*FQSSRQ
Trigger: CTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTREKSSA*LELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTC...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGATATCCACAGGGGTGTaGTGTGGCACTCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRISTGV*CGTLSN
Trigger: ATTGGAGAGAGTGCCACACAACACCCCTGTGGATAT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAATATCCACAGGGGTGTaGTGTGGCACTCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTISTGV*CGTLSN
Trigger: ATTGGAGAGAGTGCCACACAACACCCCTGTGGATAT...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RREFCPAELKTVFLPFIPSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVCLQGG*WSGAAS
Trigger: GGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCA...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: RPSESKVFLISKSLRNMTCLQGG*WSGAAS
Trigger: GGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCATTGGACTTCTTCATCTaGGACTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RREFCPAELKTVFLPFIPLDFFI*DFLLFL
Trigger: GAGGAAGAGGAGGAAGTCCAAGATGAAGAAGTCCAA...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACTTGGACTTCTTCATCTaGGACTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHLDFFI*DFLLFL
Trigger: GAGGAAGAGGAGGAAGTCCAAGATGAAGAAGTCCAA...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACTCCTCTGTCTGCTGTTaGCGAGTCCTGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNSSVCC*RVLLSL
Trigger: GAGGCTCAACAGGACTCGCAAACAGCAGACAGAGGA...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS CCA 90 bp TGTCACAAGGAGCAGAAGAACATTGCTCTGGTGCAGGCTCCTCTGTaGTCTTCATGTCTGATCCCAAGACTCTCACCAGTGAAGAATAAT +
Preference number: 5 (lower is better)
Translates to: CHKEQKNIALVQAPL*SSCLIPRLSPVKNN
Trigger: ATTATTCTTCACTGGTGAGAGTCTTGGGATCAGACATGAAGACCACAGAGGAGCCTGCACCAGAGCAATGTTCTTCTGCTCCTTGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCCAACATCAGCCCAGGTaGTATTTTCTGGATCCGAAA +
Preference number: 5 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVQHQPR*YFLDPK
Trigger: TTTCGGATCCAGAAAATACAACCTGGGCTGATGTTG...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLIWGLV*RLVCVT
Trigger: TGTGACACAGACCAGCCTCAAGACAAGCCCCCAGAT...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAATTTTTGGAGCCTGACTaGTTCCAAAGCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLEFLEPD*FQSSRQ
Trigger: CTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAA...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCATTTCCCCACATGAACTaGAGCTTTGTGTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: RREFCPAELKTVFLPFIPFPHMN*SFVSVF
Trigger: GAACACAGACACAAAGCTCAAGTTCATGTGGGGAAA...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CGGCGAGAGTTCTGTCCAGCTGAGTTGAAAACTGTCTTCCTACCATTCATCCCAAAGAAAAGCTTCCTCTaGCTCACAGGAGAAATCGTC +
Preference number: 5 (lower is better)
Translates to: RREFCPAELKTVFLPFIPKKSFL*LTGEIV
Trigger: GACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTT...TGGGATGAATGGTAGGAAGACAGTTTTCAACTCAGCTGGACAGAACTCTCGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CCGAATGCCTCCTGTCCTTCCAGGTTCCTGCTAGGCCTTCTGAAAGCAAAGTGTCACTCTCTCCAATTCTaGGACAATGTTTATATCCAG +
Preference number: 5 (lower is better)
Translates to: PNASCPSRFLLGLLKAKCHSLQF*DNVYIQ
Trigger: CTGGATATAAACATTGTCCAAGAATTGGAGAGAGTG...ACACTTTGCTTTCAGAAGGCCTAGCAGGAACCTGGAAGGACAGGAGGCATTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAAGGAGCTCTGTCAAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LNSGGCTSRCYSLEGALSSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...TGACAGAGCTCCTTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp ACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGTCAGTCAGCAGAAGACTGACTTaGGACTTCTTCATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: TAERPPLSGRQLFNTRSVSRRLT*DFFILD
Trigger: GTCCAAGATGAAGAAGTCCAAAGTCAGTCTTCTGCT...GACTGACCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCCCCTCGCTCCAGGCTTaGGACTTCTTCATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLPSLQA*DFFILD
Trigger: GTCCAAGATGAAGAAGTCCAAAGCCTGGAGCGAGGG...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000149019.2
CDS GCA 90 bp TCACCCAATGGAATCTCTTCTTCAGCTAGAAGAAAAGCTTCCTCTTaGTCACAGGAGAAATCGTCAGCTTTGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SPNGISSSARRKASS*SQEKSSALLELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTTCTAGCTGAAGAAGAGATTCCATTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVIWGLV*RLVCVT
Trigger: TGTGACACAGACCAGCCTCAAGACAAGCCCCCAGAT...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNIWGLV*RLVCVT
Trigger: TGTGACACAGACCAGCCTCAAGACAAGCCCCCAGAT...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp TTGTGTTTTCTCAGCAGCCTTAGGTTCAGCTGCCTGTCGCAGAATCCCATTTCAGCTTTCACAAAGTTCTaGTCCACCTGTTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: LCFLSSLRFSCLSQNPISAFTKF*STCFWS
Trigger: GCTCCAAAAACAGGTGGACAAGAACTTTGTGAAAGC...TGAAATGGGATTCTGCGACAGGCAGCTGAACCTAAGGCTGCTGAGAAAACACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp CACTCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACATTTCCCCACATGAACTaGAGCTTTGTGTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: HSMTAERPPLSGRQLFNTFPHMN*SFVSVF
Trigger: GAACACAGACACAAAGCTCAAGTTCATGTGGGGAAA...TGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAAGAAAAGCTTCCTCTaGCTCACAGGAGAAATCGTC +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRKKSFL*LTGEIV
Trigger: GACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GCATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCCACTCTCTCCAATTCTaGGACAATGTTTATATCCAG +
Preference number: 5 (lower is better)
Translates to: ALLPVLGFLGLDTSQGDSHSLQF*DNVYIQ
Trigger: CTGGATATAAACATTGTCCAAGAATTGGAGAGAGTG...GGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGAGCAGAAGACTGACTTaGGACTTCTTCATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRSRRLT*DFFILD
Trigger: GTCCAAGATGAAGAAGTCCAAAGTCAGTCTTCTGCT...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTCCCATTGTGGTGCCTaGAGTGGTCACAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNSHCGA*SGHSSS
Trigger: AGAGGAGCTGTGACCACTCAAGGCACCACAATGGGA...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTTCCCATTGTGGTGCCTaGAGTGGTCACAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVSHCGA*SGHSSS
Trigger: AGAGGAGCTGTGACCACTCAAGGCACCACAATGGGA...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACGCAATGCTGCTCCCATaGTGGTGCCTTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNAMLLP*WCLEWS
Trigger: TGACCACTCAAGGCACCACAATGGGAGCAGCATTGC...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCAATGCTGCTCCCATaGTGGTGCCTTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKAMLLP*WCLEWS
Trigger: TGACCACTCAAGGCACCACAATGGGAGCAGCATTGC...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS CCA 90 bp GGCTCAGAGGATATCACAACAGGTCTCCGCAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTATGGTCCAGCTTCACAATCTTCACAA +
Preference number: 5 (lower is better)
Translates to: GSEDITTGLRSFNKT*LVSWVYGPASQSSQ
Trigger: TTGTGAAGATTGTGAAGCTGGACCATACACCCATGACACTAACCATGTTTTGTTAAAGCTGCGGAGACCTGTTGTGATATCCTCTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTTTTTGGAGCCTGACTaGTTCCAAAGCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLFLEPD*FQSSRQ
Trigger: CTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLEKSSA*LELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTC...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ATTACTTCCTGTTCTCGGCTTTCTAGGGCTGGATACCTCACAAGGGGATTCCACCACTCTCTCCAATTCTaGGACAATGTTTATATCCAG +
Preference number: 5 (lower is better)
Translates to: ITSCSRLSRAGYLTRGFHHSLQF*DNVYIQ
Trigger: CTGGATATAAACATTGTCCAAGAATTGGAGAGAGTG...GTGGAATCCCCTTGTGAGGTATCCAGCCCTAGAAAGCCGAGAACAGGAAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACAAGGTCAGTCCTCAATAGCGGTGGCTGTACCAGTCGTTGTTATTCACTTGAATCTCAGCTTTCCTCTTaGCTGATACAGTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: TRSVLNSGGCTSRCYSLESQLSS*LIQWNQ
Trigger: CTGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGA...TTCAAGTGAATAACAACGACTGGTACAGCCACCGCTATTGAGGACTGACCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107208.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GTTATTCACTTGAAGGAGCTCTGTCACAACCTGCAGGATATTGTAATTGTGTTTTCCTCTGTCTGCTGTTaGCGAGTCCTGTTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: VIHLKELCHNLQDIVIVFSSVCC*RVLLSL
Trigger: GAGGCTCAACAGGACTCGCAAACAGCAGACAGAGGA...AAACACAATTACAATATCCTGCAGGTTGTGACAGAGCTCCTTCAAGTGAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107208.8
CDS-3UTR CAA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACCAACATCAGCCCAGGTaGTATTTTCTGGATCCGAAA +
Preference number: 5 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNQHQPR*YFLDPK
Trigger: TTTCGGATCCAGAAAATACAACCTGGGCTGATGTTG...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAATTTTTGGAGCCTGACTaGTTCCAAAGCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKFLEPD*FQSSRQ
Trigger: CTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAA...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNEKSSA*LELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTC...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGTATTTGCACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGAAGAAAAGCTTCCTCTaGCTCACAGGAGAAATCGTC +
Preference number: 5 (lower is better)
Translates to: SICTCLSFQSTVTVSKRTKKSFL*LTGEIV
Trigger: GACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTT...CGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGTGCAAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCAATGACAGCAGAGAGACCACCTCTGAGCGGCAGGCAGTTATTTAATACAAGGCACTCTCTCCAATTCTaGGACAATGTTTATATCCAG +
Preference number: 5 (lower is better)
Translates to: SMTAERPPLSGRQLFNTRHSLQF*DNVYIQ
Trigger: CTGGATATAAACATTGTCCAAGAATTGGAGAGAGTG...CCTTGTATTAAATAACTGCCTGCCGCTCAGAGGTGGTCTCTCTGCTGTCATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCAGTCTCACATACAAATaGGGTCCCACTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLSLTYK*GPTQVF
Trigger: GAAGACCTGAGTGGGACCCAATTTGTATGTGAGACT...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTTGGACTTCTTCATCTaGGACTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLLDFFI*DFLLFL
Trigger: GAGGAAGAGGAGGAAGTCCAAGATGAAGAAGTCCAA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACAGCAGAAGACTGACTTaGGACTTCTTCATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNSRRLT*DFFILD
Trigger: GTCCAAGATGAAGAAGTCCAAAGTCAGTCTTCTGCT...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGTCCCATTGTGGTGCCTaGAGTGGTCACAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMSHCGA*SGHSSS
Trigger: AGAGGAGCTGTGACCACTCAAGGCACCACAATGGGA...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTTCCCATTGTGGTGCCTaGAGTGGTCACAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTSHCGA*SGHSSS
Trigger: AGAGGAGCTGTGACCACTCAAGGCACCACAATGGGA...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGCAATGCTGCTCCCATaGTGGTGCCTTGAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGAMLLP*WCLEWS
Trigger: TGACCACTCAAGGCACCACAATGGGAGCAGCATTGC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS CCA 90 bp ATTCCCCGTGTTTTTCATCCTCCAGTGTTTAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATCAGGCAAATTCTCATCCACAAATGC +
Preference number: 5 (lower is better)
Translates to: IPRVFHPPVFNKLGS*LKMSPIRQILIHKC
Trigger: GCATTTGTGGATGAGAATTTGCCTGATGGGACTCATCTTCAGCCAGGAACCAAGTTTATTAAACACTGGAGGATGAAAAACACGGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTTTCCCCACATGAACTaGAGCTTTGTGTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: ARPSESKVFLISKSLRNMFPHMN*SFVSVF
Trigger: GAACACAGACACAAAGCTCAAGTTCATGTGGGGAAA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGAAGAAAAGCTTCCTCTaGCTCACAGGAGAAATCGTC +
Preference number: 5 (lower is better)
Translates to: ARPSESKVFLISKSLRNMKKSFL*LTGEIV
Trigger: GACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTT...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTCTCTCTCAGCTTTCCTCTTaGCTGATACAGTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: NGKLTFLWVSPKALLPVLSQLSS*LIQWNQ
Trigger: CTGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGA...GAGAACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGTCTCAGCTTTCCTCTTaGCTGATACAGTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: ARPSESKVFLISKSLRNMSQLSS*LIQWNQ
Trigger: CTGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGA...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTGGACTTCTTCATCTaGGACTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RPSESKVFLISKSLRNMTLDFFI*DFLLFL
Trigger: GAGGAAGAGGAGGAAGTCCAAGATGAAGAAGTCCAA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ATGAGACCTAGAACTCTTGACAGAGCCTTCTTCCCATCTATTCTAATGGTAAACTTGGACTTCTTCATCTaGGACTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: MRPRTLDRAFFPSILMVNLDFFI*DFLLFL
Trigger: GAGGAAGAGGAGGAAGTCCAAGATGAAGAAGTCCAA...GTTTACCATTAGAATAGATGGGAAGAAGGCTCTGTCAAGAGTTCTAGGTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTCAACATCAGCCCAGGTaGTATTTTCTGGATCCGAAA +
Preference number: 5 (lower is better)
Translates to: RPSESKVFLISKSLRNMTQHQPR*YFLDPK
Trigger: TTTCGGATCCAGAAAATACAACCTGGGCTGATGTTG...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTTTTTTGGAGCCTGACTaGTTCCAAAGCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTFLEPD*FQSSRQ
Trigger: CTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAA...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAGCATTACTTCCTGTTGCTTTCACAAAGTTCTaGTCCACCTGTTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: SNGKLTFLWVSPKALLPVAFTKF*STCFWS
Trigger: GCTCCAAAAACAGGTGGACAAGAACTTTGTGAAAGC...AACAGGAAGTAATGCTTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTGCTTTCACAAAGTTCTaGTCCACCTGTTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: RPSESKVFLISKSLRNMTAFTKF*STCFWS
Trigger: GCTCCAAAAACAGGTGGACAAGAACTTTGTGAAAGC...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTTCCCCACATGAACTaGAGCTTTGTGTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: RPSESKVFLISKSLRNMTFPHMN*SFVSVF
Trigger: GAACACAGACACAAAGCTCAAGTTCATGTGGGGAAA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAATTTCCCCACATGAACTaGAGCTTTGTGTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKFPHMN*SFVSVF
Trigger: GAACACAGACACAAAGCTCAAGTTCATGTGGGGAAA...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMEKSSA*LELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTC...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: KVFLISKSLRNMTFLICCEKSSA*LELILS
Trigger: GGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTC...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp CTTCTTCCCATCTATTCTAATGGTAAACTAACCTTTCTGTGGGTTAGCCCCAAAAAGAAAAGCTTCCTCTaGCTCACAGGAGAAATCGTC +
Preference number: 5 (lower is better)
Translates to: LLPIYSNGKLTFLWVSPKKKSFL*LTGEIV
Trigger: GACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTT...TTTGGGGCTAACCCACAGAAAGGTTAGTTTACCATTAGAATAGATGGGAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACATGCTTGTCCTTCCAATCCACTGTGACAGTCAGTAAAAGGACGACTACTAACCACTCTCTCCAATTCTaGGACAATGTTTATATCCAG +
Preference number: 5 (lower is better)
Translates to: TCLSFQSTVTVSKRTTTNHSLQF*DNVYIQ
Trigger: CTGGATATAAACATTGTCCAAGAATTGGAGAGAGTG...GTTAGTAGTCGTCCTTTTACTGACTGTCACAGTGGATTGGAAGGACAAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTATATCCACAGGGGTGTaGTGTGGCACTCTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTISTGV*CGTLSN
Trigger: ATTGGAGAGAGTGCCACACAACACCCCTGTGGATAT...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTCTCAGCTTTCCTCTTaGCTGATACAGTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: RPSESKVFLISKSLRNMTSQLSS*LIQWNQ
Trigger: CTGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGA...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTAGCAGAAGACTGACTTaGGACTTCTTCATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: RPSESKVFLISKSLRNMTSRRLT*DFFILD
Trigger: GTCCAAGATGAAGAAGTCCAAAGTCAGTCTTCTGCT...AGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS TCA 90 bp GCTTCATCTACAACATGGTACCCTTCGTGGACTTGCATCTGTAGCTaGTTTCCTTGCTTAATGTTAGCCATCTTAAGTGCTTCTTCATAT +
Preference number: 5 (lower is better)
Translates to: ASSTTWYPSWTCICS*FPCLMLAILSASSY
Trigger: ATATGAAGAAGCACTTAAGATGGCTAACATTAAGCAAGGAAATCAGCTACAGATGCAAGTCCACGAAGGGTACCATGTTGTAGATGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp GCTAGGCCTTCTGAAAGCAAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGCACTCTCTCCAATTCTaGGACAATGTTTATATCCAG +
Preference number: 5 (lower is better)
Translates to: ARPSESKVFLISKSLRNMHSLQF*DNVYIQ
Trigger: CTGGATATAAACATTGTCCAAGAATTGGAGAGAGTG...CATGTTCCTCAAAGACTTAGAAATGAGGAACACTTTGCTTTCAGAAGGCCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTTTGGACTTCTTCATCTaGGACTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KVFLISKSLRNMTFLICCLDFFI*DFLLFL
Trigger: GAGGAAGAGGAGGAAGTCCAAGATGAAGAAGTCCAA...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp TCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCTTTATGTAGCTATGTTGGACTTCTTCATCTaGGACTTCCTCCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SKSLRNMTFLICCLYVAMLDFFI*DFLLFL
Trigger: GAGGAAGAGGAGGAAGTCCAAGATGAAGAAGTCCAA...CATAGCTACATAAAGACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAAGTGTTCCTCATTTCTAAGTCTTTGAGGAACATGACTTTCTTGATCTGCTGTCAACATCAGCCCAGGTaGTATTTTCTGGATCCGAAA +
Preference number: 5 (lower is better)
Translates to: KVFLISKSLRNMTFLICCQHQPR*YFLDPK
Trigger: TTTCGGATCCAGAAAATACAACCTGGGCTGATGTTG...ACAGCAGATCAAGAAAGTCATGTTCCTCAAAGACTTAGAAATGAGGAACACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCGCTTTCACAAAGTTCTaGTCCACCTGTTTTTGGAGC +
Preference number: 5 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGAFTKF*STCFWS
Trigger: GCTCCAAAAACAGGTGGACAAGAACTTTGTGAAAGC...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAAGAAAAGCTTCCTCTaGCTCACAGGAGAAATCGTC +
Preference number: 5 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGKKSFL*LTGEIV
Trigger: GACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp ACTCAATTTCAATACAAGCAGAAGGAAAAGCGATCTAAGGAAGTCCAAGTTACTAAGAAAAGCTTCCTCTaGCTCACAGGAGAAATCGTC +
Preference number: 5 (lower is better)
Translates to: TQFQYKQKEKRSKEVQVTKKSFL*LTGEIV
Trigger: GACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTT...AGTAACTTGGACTTCCTTAGATCGCTTTTCCTTCTGCTTGTATTGAAATTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCTCTCAGCTTTCCTCTTaGCTGATACAGTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGSQLSS*LIQWNQ
Trigger: CTGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGA...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS-3UTR CAA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCAGCAGAAGACTGACTTaGGACTTCTTCATCTTGGAC +
Preference number: 5 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGSRRLT*DFFILD
Trigger: GTCCAAGATGAAGAAGTCCAAAGTCAGTCTTCTGCT...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS TCA 90 bp CCTTGCTTAATGTTAGCCATCTTAAGTGCTTCTTCATATTCACCTTaGCTATTGATGGATATCTCCTCGTTCTCCTCATCCAGGTATTTT +
Preference number: 5 (lower is better)
Translates to: PCLMLAILSASSYSP*LLMDISSFSSSRYF
Trigger: AAAATACCTGGATGAGGAGAACGAGGAGATATCCATCAATAGTCAAGGTGAATATGAAGAAGCACTTAAGATGGCTAACATTAAGCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS-3UTR CAA 90 bp AAACTGTCTTCCTACCATTCATCCCATTTCTACAGTGAAAATTTAAGTTCTGGCCACTCTCTCCAATTCTaGGACAATGTTTATATCCAG +
Preference number: 5 (lower is better)
Translates to: KLSSYHSSHFYSENLSSGHSLQF*DNVYIQ
Trigger: CTGGATATAAACATTGTCCAAGAATTGGAGAGAGTG...GCCAGAACTTAAATTTTCACTGTAGAAATGGGATGAATGGTAGGAAGACAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp GCTCCAGGCCTGGCTGGGAGAGCGCAGAGCTGTACATaGAGTCCCCCAGGGGGCGGCTGGTATCAAAGCACT +
Preference number: 6 (lower is better)
Translates to: APGLAGRAQSCT*SPPGGGWYQST
Trigger: AGTGCTTTGATACCAGCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCGCTCTCCCAGCCAGGCCTGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CCA 72 bp CTCCTGATGACTCACACTGTCCACAAGGGGCGCTCCTaGACAATGCTGCTGGAAGTCCTGCCACCTCGGGGA +
Preference number: 6 (lower is better)
Translates to: LLMTHTVHKGRS*TMLLEVLPPRG
Trigger: TCCCCGAGGTGGCAGGACTTCCAGCAGCATTGTCCAGGAGCGCCCCTTGTGGACAGTGTGAGTCATCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS TCA 72 bp CTGCACCAAACCCGAGGCCCAAACTGCTGGCCTTTGTaGGAGAGACGCCAGTGCGAAGTGTATGTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: LHQTRGPNCWPL*ERRQCEVYVPS
Trigger: GGAGGGGACATACACTTCGCACTGGCGTCTCTCTCACAAAGGCCAGCAGTTTGGGCCTCGGGTTTGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS TCA 72 bp CCTCCAGCAATGCTGCTCCCATTGTGGTGCCTCCTCTaGTGTCATCAGGGGCTGGGGGAACTTCGTGCATGG +
Preference number: 6 (lower is better)
Translates to: PPAMLLPLWCLL*CHQGLGELRAW
Trigger: CCATGCACGAAGTTCCCCCAGCCCCTGATGACATCAGAGGAGGCACCACAATGGGAGCAGCATTGCTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS CCA 72 bp GGACAGCAGGTCCTGGGCAGTCAGGAGGTCCACAGATaGAATGTACAGCTCCCTTTCACTGGCAGCGCGTCT +
Preference number: 6 (lower is better)
Translates to: GQQVLGSQEVHR*NVQLPFTGSAS
Trigger: AGACGCGCTGCCAGTGAAAGGGAGCTGTACATTCCATCTGTGGACCTCCTGACTGCCCAGGACCTGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp GCTCTCCCTCTCTGGGAGTCTCTCTCTAGCCTCAGTTaGTTCCAGCCCAGACTCGATCCCAGGTTCGCCTTC +
Preference number: 6 (lower is better)
Translates to: ALPLWESLSSLS*FQPRLDPRFAF
Trigger: GAAGGCGAACCTGGGATCGAGTCTGGGCTGGAACCAACTGAGGCTAGAGAGAGACTCCCAGAGAGGGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS GCA 72 bp GCACAGGGCTGCAAAGGAAGCATCAGGGTGTTAGACTaGAGCAAGCTCTCAGGTCGGCCCAAAGGGGACTTG +
Preference number: 6 (lower is better)
Translates to: AQGCKGSIRVLD*SKLSGRPKGDL
Trigger: CAAGTCCCCTTTGGGCCGACCTGAGAGCTTGCTGCAGTCTAACACCCTGATGCTTCCTTTGCAGCCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS GCA 72 bp CAGACAAAGCCCCCTTCACCAGTCCTCCAGCAATGCTaGTCCCATTGTGGTGCCTTGAGTGGTCACAGCTCC +
Preference number: 6 (lower is better)
Translates to: QTKPPSPVLQQC*SHCGALSGHSS
Trigger: GGAGCTGTGACCACTCAAGGCACCACAATGGGAGCAGCATTGCTGGAGGACTGGTGAAGGGGGCTTTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS CCA 72 bp GAGACGCCAGTGCGAAGTGTATGTCCCCTCCAAGGTTaGAGCGATGAACTCCACAGACACGACCCCAACGTG +
Preference number: 6 (lower is better)
Translates to: ETPVRSVCPLQG*SDELHRHDPNV
Trigger: CACGTTGGGGTCGTGTCTGTGGAGTTCATCGCTCCAACCTTGGAGGGGACATACACTTCGCACTGGCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS TCA 72 bp CAGCTCCCTTTCACTGGCAGCGCGTCTTGTCTTCTGTaGGGCACTGGCTCCTGTCCCTTCTGTCTGCTTTGT +
Preference number: 6 (lower is better)
Translates to: QLPFTGSASCLL*GTGSCPFCLLC
Trigger: ACAAAGCAGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGCGCTGCCAGTGAAAGGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS GCA 72 bp CAACAGACAAAGCCCCCTTCACCAGTCCTCCAGCAATaGTGCTCCCATTGTGGTGCCTTGAGTGGTCACAGC +
Preference number: 6 (lower is better)
Translates to: QQTKPPSPVLQQ*CSHCGALSGHS
Trigger: GCTGTGACCACTCAAGGCACCACAATGGGAGCAGCATTGCTGGAGGACTGGTGAAGGGGGCTTTGTCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS GCA 72 bp CCTCCTCTGATGTCATCAGGGGCTGGGGGAACTTCGTaGATGGTAGCTGGTGAATCCACTCCTGGTGAATCC +
Preference number: 6 (lower is better)
Translates to: PPLMSSGAGGTS*MVAGESTPGES
Trigger: GGATTCACCAGGAGTGGATTCACCAGCTACCATGCACGAAGTTCCCCCAGCCCCTGATGACATCAGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123558.8
CDS CCA 72 bp TCCCTCTGTGGGGACCTCTGCCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAGGTAAGGGATCGAATT +
Preference number: 6 (lower is better)
Translates to: SLCGDLCLQGGL*SGAASKVRDRI
Trigger: AATTCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp ACGCGGTCCTTCTTCAGGCAAGGCAAATTTCATCTGTaGGGACCTCTGCCTGCAAGGAGGGTTGTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: TRSFFRQGKFHL*GPLPARRVVVW
Trigger: CCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGATGAAATTTGCCTTGCCTGAAGAAGGACCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS CAA 90 bp GGTCCACAGATGGAATGTACAGCTCCCTTTCACTGGCAGCGCGTCTaGTCTTCTGTGAGGCACTGGCTCCTGTCCCTTCTGTCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: GPQMECTAPFHWQRV*SSVRHWLLSLLSAL
Trigger: CAAAGCAGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGACAAGACGCGCTGCCAGTGAAAGGGAGCTGTACATTCCATCTGTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS GCA 72 bp TCTCCTCTGATGTCATCAGGGGCTGGGGGAACTTCGTaGATGGTAGCTGGTGAATCCACTCCTGGTGAATCC +
Preference number: 6 (lower is better)
Translates to: SPLMSSGAGGTS*MVAGESTPGES
Trigger: GGATTCACCAGGAGTGGATTCACCAGCTACCATGCACGAAGTTCCCCCAGCCCCTGATGACATCAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000149019.2
CDS GCA 72 bp TCTTCAGGCAAGGCAAATTTCATCTGTGGGGACCTCTaGCTGCAAGGAGGGTTGTGGTCTGGAGCAGCATCC +
Preference number: 6 (lower is better)
Translates to: SSGKANFICGDL*LQGGLWSGAAS
Trigger: GGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGATGAAATTTGCCTTGCCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS CCA 72 bp CTGTGGGGACCTCTGCCTGCAAGGAGGGTTGTGGTCTaGAGCAGCATCCAAGGTAAGGGATCGAATTACAGT +
Preference number: 6 (lower is better)
Translates to: LWGPLPARRVVV*SSIQGKGSNYS
Trigger: ACTGTAATTCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS TCA 72 bp TTCGACCGAAGCAGGGGTCTCAGCTTTCCTCTTTGCTaGTACAGTGGAATCCACAGGGGTGTTGTGTGGCAC +
Preference number: 6 (lower is better)
Translates to: FDRSRGLSFPLC*YSGIHRGVVWH
Trigger: GTGCCACACAACACCCCTGTGGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGACCCCTGCTTCGGTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS CCA 72 bp GTTGGAGCGATGAACTCCACAGACACGACCCCAACGTaGCCAGCCTTCAAGCAGGGAACCAAAACATCTTTC +
Preference number: 6 (lower is better)
Translates to: VGAMNSTDTTPT*PAFKQGTKTSF
Trigger: GAAAGATGTTTTGGTTCCCTGCTTGAAGGCTGGCCACGTTGGGGTCGTGTCTGTGGAGTTCATCGCTCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp TTCATCTGTGGGGACCTCTGCCTGCAAGGAGGGTTGTaGTCTGGAGCAGCATCCAAGGTAAGGGATCGAATT +
Preference number: 6 (lower is better)
Translates to: FICGDLCLQGGL*SGAASKVRDRI
Trigger: AATTCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS CCA 72 bp GGCTGTGGTCTGATCTTCAGAAACGATGGGCTTGAGTaGTCACAGCTCCTCTGTCTGCTGTTTGCGAGTCCT +
Preference number: 6 (lower is better)
Translates to: GCGLIFRNDGLE*SQLLCLLFASP
Trigger: AGGACTCGCAAACAGCAGACAGAGGAGCTGTGACCACTCAAGCCCATCGTTTCTGAAGATCAGACCACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107208.8
CDS CAA 72 bp AATTTCATCTGTGGGGACCTCTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCCAAGGTAAGGGATCGA +
Preference number: 6 (lower is better)
Translates to: NFICGDLCLQGG*WSGAASKVRDR
Trigger: TCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGATGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS CAA 90 bp TACAGCTGTAATTCCCTCTGTGGGGACCTCTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCCAAGGTAAGGGATCGAATTACAGTC +
Preference number: 6 (lower is better)
Translates to: YSCNSLCGDLCLQGG*WSGAASKVRDRITV
Trigger: GACTGTAATTCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGAGGGAATTACAGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CAA 90 bp GGCAAGGCAAATTTCATCTGTGGGGACCTCTGCCTGCAAGGAGGGTaGTGGTCTGGAGCAGCATCCAAGGTAAGGGATCGAATTACAGTC +
Preference number: 6 (lower is better)
Translates to: GKANFICGDLCLQGG*WSGAASKVRDRITV
Trigger: GACTGTAATTCGATCCCTTACCTTGGATGCTGCTCCAGACCACAACCCTCCTTGCAGGCAGAGGTCCCCACAGATGAAATTTGCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107212.8
CDS CCA 72 bp GAGACTTCTGTGGGTGAGGAACTCAGGAGTGGCTTCTaGAGGACAAGCTTCTCCTGCAACCTCTGTTCAAGT +
Preference number: 6 (lower is better)
Translates to: ETSVGEELRSGF*RTSFSCNLCSS
Trigger: ACTTGAACAGAGGTTGCAGGAGAAGCTTGTCCTCCAGAAGCCACTCCTGAGTTCCTCACCCACAGAAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CCA 72 bp CTCATCCACAAATGCTGCACTGAGTGTTGGCATAACTaGGGCACAGGGCTGCAAAGGAAGCATCAGGGTGTT +
Preference number: 6 (lower is better)
Translates to: LIHKCCTECWHN*GTGLQRKHQGV
Trigger: AACACCCTGATGCTTCCTTTGCAGCCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCATTTGTGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CAA 90 bp TCGGAACATCTCCAGGTAGCTTGTAAACCAATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACAAGGAGCAGAAGAACATTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: SEHLQVACKPIWGLV*RLVCVTRSRRTLLW
Trigger: CCAGAGCAATGTTCTTCTGCTCCTTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGCTACCTGGAGATGTTCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS TCA 72 bp TTCGACCGAAGCAGGGGTCTCAGCTTTCCTCTTTGCTaGTACAGTGGAATCAGGAGGTGCTTTAAATCCCGC +
Preference number: 6 (lower is better)
Translates to: FDRSRGLSFPLC*YSGIRRCFKSR
Trigger: GCGGGATTTAAAGCACCTCCTGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGACCCCTGCTTCGGTCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS GCA 72 bp ATGAGTCCCATCAGGCAAATTCTCATCCACAAATGCTaGACTGAGTGTTGGCATAACTGGGGCACAGGGCTG +
Preference number: 6 (lower is better)
Translates to: MSPIRQILIHKC*TECWHNWGTGL
Trigger: CAGCCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCATTTGTGGATGAGAATTTGCCTGATGGGACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS GCA 72 bp GTCTTCTGTGAGGCACTGGCTCCTGTCCCTTCTGTCTaGTTTGTCACCTCACCCAATGGAATCTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: VFCEALAPVPSV*FVTSPNGISSS
Trigger: TGAAGAAGAGATTCCATTGGGTGAGGTGACAAAGCAGACAGAAGGGACAGGAGCCAGTGCCTCACAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp TTCTCGGAACATCTCCAGGTAGCTTGTAAACCAATCTaGGGGCTTGTCTTGAGGCTGGTCTGTGTCACAAGG +
Preference number: 6 (lower is better)
Translates to: FSEHLQVACKPI*GLVLRLVCVTR
Trigger: CCTTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGCTACCTGGAGATGTTCCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CAA 72 bp CTCCAGGTAGCTTGTAAACCAATCTGGGGGCTTGTCTaGAGGCTGGTCTGTGTCACAAGGAGCAGAAGAACA +
Preference number: 6 (lower is better)
Translates to: LQVACKPIWGLV*RLVCVTRSRRT
Trigger: TGTTCTTCTGCTCCTTGTGACACAGACCAGCCTCAAGACAAGCCCCCAGATTGGTTTACAAGCTACCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CAA 72 bp TTTCTTCGACCGAAGCAGGGGTCTCAGCTTTCCTCTTaGCTGATACAGTGGAATCCACAGGGGTGTTGTGTG +
Preference number: 6 (lower is better)
Translates to: FLRPKQGSQLSS*LIQWNPQGCCV
Trigger: CACACAACACCCCTGTGGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGACCCCTGCTTCGGTCGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS GCA 72 bp AAGATGAGTCCCATCAGGCAAATTCTCATCCACAAATaGTGCACTGAGTGTTGGCATAACTGGGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: KMSPIRQILIHK*CTECWHNWGTG
Trigger: CCCTGTGCCCCAGTTATGCCAACACTCAGTGCAGCATTTGTGGATGAGAATTTGCCTGATGGGACTCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp CTGTCCTGGCAGCCGCTTGGTTTTCTACCACATTTTTaGGGAGTGCTTCATCTACAACATGGTACCCTTCGT +
Preference number: 6 (lower is better)
Translates to: LSWQPLGFLPHF*GVLHLQHGTLR
Trigger: ACGAAGGGTACCATGTTGTAGATGAAGCACTCCCCAAAAATGTGGTAGAAAACCAAGCGGCTGCCAGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CCA 72 bp ACTGCAGCAAGCTCTCAGGTCGGCCCAAAGGGGACTTaGGACTCTGAAGTCCATGGATTGAATTCCATAAAT +
Preference number: 6 (lower is better)
Translates to: TAASSQVGPKGT*DSEVHGLNSIN
Trigger: ATTTATGGAATTCAATCCATGGACTTCAGAGTCCCAAGTCCCCTTTGGGCCGACCTGAGAGCTTGCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CAA 72 bp CACAAAGTTCTTGTCCACCTGTTTTTGGAGCCTGACTaGTTCCAAAGCAGCAGGCAGACGAGGAGCGGAATA +
Preference number: 6 (lower is better)
Translates to: HKVLVHLFLEPD*FQSSRQTRSGI
Trigger: TATTCCGCTCCTCGTCTGCCTGCTGCTTTGGAACAAGTCAGGCTCCAAAAACAGGTGGACAAGAACTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CAA 90 bp CTCCTGCAACCTCTGTTCAAGTTTCTCCACCGTTTCCTTAACCACTaGTTCTCGGAACATCTCCAGGTAGCTTGTAAACCAATCTGGGGG +
Preference number: 6 (lower is better)
Translates to: LLQPLFKFLHRFLNH*FSEHLQVACKPIWG
Trigger: CCCCCAGATTGGTTTACAAGCTACCTGGAGATGTTCCGAGAACAAGTGGTTAAGGAAACGGTGGAGAAACTTGAACAGAGGTTGCAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS TCA 72 bp TTCCTCTTGCTCACAGGAGAAATCGTCAGCTTTGCTTaGGCTGATCCTGTCCCCTTCAACATTATCAGGGCT +
Preference number: 6 (lower is better)
Translates to: FLLLTGEIVSFA*ADPVPFNIIRA
Trigger: AGCCCTGATAATGTTGAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTCCTGTGAGCAAGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp GTTCCAAAGCAGCAGGCAGACGAGGAGCGGAATACTTaGAGTAGAAAAATGGCTCAGAGGATATCACAACAG +
Preference number: 6 (lower is better)
Translates to: VPKQQADEERNT*SRKMAQRISQQ
Trigger: CTGTTGTGATATCCTCTGAGCCATTTTTCTACTCCAAGTATTCCGCTCCTCGTCTGCCTGCTGCTTTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp TCCACAGGGGTGTTGTGTGGCACTCTCTCCAATTCTTaGACAATGTTTATATCCAGCAGCTCAAAGGACAGC +
Preference number: 6 (lower is better)
Translates to: STGVLCGTLSNS*TMFISSSSKDS
Trigger: GCTGTCCTTTGAGCTGCTGGATATAAACATTGTCCAAGAATTGGAGAGAGTGCCACACAACACCCCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CAA 90 bp GCTAGAAGAAAAGCTTCCTCTTGCTCACAGGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCCCCTTCAACATTATCAGGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: ARRKASSCSQEKSSA*LELILSPSTLSGLS
Trigger: TGAGAGCCCTGATAATGTTGAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTCCTGTGAGCAAGAGGAAGCTTTTCTTCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CAA 90 bp GTCTCAGCTTTCCTCTTTGCTGATACAGTGGAATCCACAGGGGTGTaGTGTGGCACTCTCTCCAATTCTTGGACAATGTTTATATCCAGC +
Preference number: 6 (lower is better)
Translates to: VSAFLFADTVESTGV*CGTLSNSWTMFISS
Trigger: GCTGGATATAAACATTGTCCAAGAATTGGAGAGAGTGCCACACAACACCCCTGTGGATTCCACTGTATCAGCAAAGAGGAAAGCTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS CAA 72 bp AAAGCTTCCTCTTGCTCACAGGAGAAATCGTCAGCTTaGCTTGAGCTGATCCTGTCCCCTTCAACATTATCA +
Preference number: 6 (lower is better)
Translates to: KASSCSQEKSSA*LELILSPSTLS
Trigger: TGATAATGTTGAAGGGGACAGGATCAGCTCAAGCAAAGCTGACGATTTCTCCTGTGAGCAAGAGGAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CAA 72 bp TTCCTCTTTGCTGATACAGTGGAATCCACAGGGGTGTaGTGTGGCACTCTCTCCAATTCTTGGACAATGTTT +
Preference number: 6 (lower is better)
Translates to: FLFADTVESTGV*CGTLSNSWTMF
Trigger: AAACATTGTCCAAGAATTGGAGAGAGTGCCACACAACACCCCTGTGGATTCCACTGTATCAGCAAAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107213.8
CDS CCA 72 bp GGTCTCCGCAGCTTTAACAAAACATGGTTAGTGTCATaGGTGTATGGTCCAGCTTCACAATCTTCACAAATG +
Preference number: 6 (lower is better)
Translates to: GLRSFNKTWLVS*VYGPASQSSQM
Trigger: CATTTGTGAAGATTGTGAAGCTGGACCATACACCCATGACACTAACCATGTTTTGTTAAAGCTGCGGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CCA 72 bp GATATCACAACAGGTCTCCGCAGCTTTAACAAAACATaGTTAGTGTCATGGGTGTATGGTCCAGCTTCACAA +
Preference number: 6 (lower is better)
Translates to: DITTGLRSFNKT*LVSWVYGPASQ
Trigger: TTGTGAAGCTGGACCATACACCCATGACACTAACCATGTTTTGTTAAAGCTGCGGAGACCTGTTGTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS CCA 72 bp AAGGTAAGGGATCGAATTACAGTCTCACATACAAATTaGGTCCCACTCAGGTCTTCTTCTGTTTCTTCGACC +
Preference number: 6 (lower is better)
Translates to: KVRDRITVSHTN*VPLRSSSVSST
Trigger: GGTCGAAGAAACAGAAGAAGACCTGAGTGGGACCCAATTTGTATGTGAGACTGTAATTCGATCCCTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS TCA 72 bp ACAACATGGTACCCTTCGTGGACTTGCATCTGTAGCTaGTTTCCTTGCTTAATGTTAGCCATCTTAAGTGCT +
Preference number: 6 (lower is better)
Translates to: TTWYPSWTCICS*FPCLMLAILSA
Trigger: AGCACTTAAGATGGCTAACATTAAGCAAGGAAATCAGCTACAGATGCAAGTCCACGAAGGGTACCATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CCA 72 bp GTTTTTCATCCTCCAGTGTTTAATAAACTTGGTTCCTaGCTGAAGATGAGTCCCATCAGGCAAATTCTCATC +
Preference number: 6 (lower is better)
Translates to: VFHPPVFNKLGS*LKMSPIRQILI
Trigger: GATGAGAATTTGCCTGATGGGACTCATCTTCAGCCAGGAACCAAGTTTATTAAACACTGGAGGATGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000071537.13
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
ENSMUST00000149019.2
CDS TCA 72 bp ATGTTAGCCATCTTAAGTGCTTCTTCATATTCACCTTaGCTATTGATGGATATCTCCTCGTTCTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: MLAILSASSYSP*LLMDISSFSSS
Trigger: GGATGAGGAGAACGAGGAGATATCCATCAATAGTCAAGGTGAATATGAAGAAGCACTTAAGATGGCTAACAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS CAA 90 bp TCCTTGCTTAATGTTAGCCATCTTAAGTGCTTCTTCATATTCACCTaGACTATTGATGGATATCTCCTCGTTCTCCTCATCCAGGTATTT +
Preference number: 6 (lower is better)
Translates to: SLLNVSHLKCFFIFT*TIDGYLLVLLIQVF
Trigger: AAATACCTGGATGAGGAGAACGAGGAGATATCCATCAATAGTCAAGGTGAATATGAAGAAGCACTTAAGATGGCTAACATTAAGCAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000103098.9
ENSMUST00000103099.8
ENSMUST00000107208.8
ENSMUST00000107212.8
ENSMUST00000107213.8
ENSMUST00000107218.10
ENSMUST00000123558.8
CDS TCA 72 bp ATGTTAGCCATCTTAAGTGCTTCTTCATATTCACACTaGATATCATACTTTACCTCCTCGTTCTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: MLAILSASSYSH*ISYFTSSFSSS
Trigger: GGATGAGGAGAACGAGGAGGTAAAGTATGATATTCAGTGTGAATATGAAGAAGCACTTAAGATGGCTAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000071537.13