Pregenerated sensors for NBN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028224Ensembl transcript IDs: ENSMUST00000029879.15, ENSMUST00000149069.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCATCCCACCCACAGATaGGGTGTCGGCTTCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKHPTHR*GVGFPV Trigger: GACAGGGAAGCCGACACCTCATCTGTGGGTGGGATG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGTTGCTTTCCGGCTCTaGTCCACCATTCAGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVVAFRL*STIQGP Trigger: CGGCCCCTGAATGGTGGATCAGAGCCGGAAAGCAAC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCTCTTCGTCGTCTTCTaGCATCAGCCTGGCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKLFVVF*HQPGFS Trigger: GGAGAAGCCAGGCTGATGGCAGAAGACGACGAAGAG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTGGCAGCTCCTCACTaGTGTCCTGAAGACCATCAC | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKVAAPH*CPEDHH Trigger: GTGATGGTCTTCAGGACAGCAGTGAGGAGCTGCCAC...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCTTCTGCCATCAGCCTaGCTTCTCCACCTCCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKLLPSA*LLHLRK Trigger: CTTTCGGAGGTGGAGAAGCCAGGCTGATGGCAGAAG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGTCCTCCGATGATGTGTaGAAGCTTTCCTGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKSSDDV*KLSCPR Trigger: CCTGGGGCAGGAAAGCTTCCACACATCATCGGAGGA...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTCTTGAAGAGCGCTGTTaGTTTCCGGCTCTGATCCAC | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVLEERC*FPALIH Trigger: GTGGATCAGAGCCGGAAAGCAACAGCGCTCTTCAAG...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTGTGGAAGCTTTCCTaGCCCAGGAAATGTCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKVWKLS*PRKCRL Trigger: AAGGCGACATTTCCTGGGGCAGGAAAGCTTCCACAC...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGCCGACATGACAAGGTaGGTACATTCTTCCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVADMTR*VHSSVQ Trigger: CTGGACGGAAGAATGTACCCACCTTGTCATGTCGGC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGTTGGCTGACAGGACTTaGGAAAGGCTTGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKLADRT*ERLGPG Trigger: TCCAGGACCAAGCCTTTCCCAAGTCCTGTCAGCCAA...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGCACGAGGACAGCTCTaGGTTGTCTTCATCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVARGQL*VVFIPF Trigger: GAAAGGGATGAAGACAACCCAGAGCTGTCCTCGTGC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCAGGACTCTTCCTGTTaGGTTCTATGTCCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKQDSSC*VLCPSH Trigger: GTGGGATGGACATAGAACTCAACAGGAAGAGTCCTG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGAGTCTGATCCTCCGATaGTGTGTGGAAGCTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKSLILR*CVEAFL Trigger: CAGGAAAGCTTCCACACATCATCGGAGGATCAGACT...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGAGACTGATGCTCCTTaGTTTTCCACAGTGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVETDAP*FSTVRV Trigger: GACCCTCACTGTGGAAAAGCAAGGAGCATCAGTCTC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTAGGACAGCTCCATCCTaGATGATTTGCACGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVRTAPS*MICTRT Trigger: TGTCCTCGTGCAAATCATCCAGGATGGAGCTGTCCT...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTGTATCTGCTGGCTCTaGTTCTGTGTCAGCTACGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVCICWL*FCVSYV Trigger: TACGTAGCTGACACAGAATCAGAGCCAGCAGATACA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCCCTTTCCCTTTTTCTaGTGCATGGCTGGAAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKPFPFF*CMAGSS Trigger: ACTACTTCCAGCCATGCACCAGAAAAAGGGAAAGGG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTATTTTTCCATTGGCTaGCAGGACTTGGGAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVYFSIG*QDLGKA Trigger: AGCCTTTCCCAAGTCCTGTCAGCCAATGGAAAAATA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGAGTTCTGCTGCTGCTaGGAAGTCCAATCCTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVEFCCC*EVQSLF Trigger: AAATAAGGATTGGACTTCTCAGCAGCAGCAGAACTC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTCTGATGGTGTCATCTaGCTCCTGCTTTTCAACCTT | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVSDGVI*LLLFNL Trigger: AAGGTTGAAAAGCAGGAGGCAGATGACACCATCAGA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTGTCAGCTACGTATGTaGTCATATTCACTGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVCQLRM*SYSLEH Trigger: GTGCTCCAGTGAATATGACCACATACGTAGCTGACA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTAGCTTTGGAGCTTaGTTTAGGGGCCTCCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKVSFGA*FRGLLY Trigger: ATAAAGGAGGCCCCTAAACCAAGCTCCAAAGCTAAC...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGTTACTGACAACCAATaGCCTAAATTCAGTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVVTDNQ*PKFSQQ Trigger: CTGCTGACTGAATTTAGGTCATTGGTTGTCAGTAAC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTAACCTTCACTTGAACTaGCAACTCTGGCTTTGTACT | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVNLHLN*QLWLCT Trigger: AGTACAAAGCCAGAGTTGGCAGTTCAAGTGAAGGTT...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTCAGCATGGTTTCGACTaGTTGACTGATCATTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVQHGFD*LTDHFQ Trigger: TTGAAAATGATCAGTCAATCAGTCGAAACCATGCTG...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGCTCGTATTCTACTCTaGATTTACTTTCAAACACCC | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVARILL*IYFQTP Trigger: GGGTGTTTGAAAGTAAATTCAGAGTAGAATACGAGC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGGGAGTGTGAAATTATaGGCTGTGTATTCGTTATTC | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKGSVKL*AVYSLF Trigger: GAATAACGAATACACAGCTCATAATTTCACACTCCC...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTTTCCCTTTTTCTGGTaGATGGCTGGAAGTAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVFPFFW*MAGSSF Trigger: AAAACTACTTCCAGCCATGCACCAGAAAAAGGGAAA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTAAGAGATTCCTCCTTTaGTTGTTGTTTCTGTACCTC | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVKRFLL*LLFLYL Trigger: GAGGTACAGAAACAACAAGCAAAGGAGGAATCTCTT...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCTGTTTGACTCAAACTaGTTACAGGGAAGTTTACTG | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKLFDSN*LQGSLL Trigger: CAGTAAACTTCCCTGTAACCAGTTTGAGTCAAACAG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTTTACTTCCAATAGCTaGTTCATCAATGGGTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVFTSNS*FINGWV Trigger: TACCCACCCATTGATGAACCAGCTATTGGAAGTAAA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTAACAGGAAATTTCATTaGAGAAAGCTGATAGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVNRKFH*RKLIAR Trigger: CCGAGCTATCAGCTTTCTCCAATGAAATTTCCTGTT...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCCTTTTTCTGGTGCATaGCTGGAAGTAGTTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKPFSGA*LEVVFD Trigger: ATCAAAAACTACTTCCAGCCATGCACCAGAAAAAGG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGATGGTTTCGACTGATTaGCTGATCATTTTCAATCAG | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKMVSTD*LIIFNQ Trigger: CTGATTGAAAATGATCAGTCAATCAGTCGAAACCAT...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCTGAGACCATTCCTTTaGAGTGTATCCATTATCAAA | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKLRPFL*SVSIIK Trigger: TTTGATAATGGATACACTTCAAAGGAATGGTCTCAG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR TCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGGGCCTCCTTTATATTaGATGTTTCTTGTGAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKGPPLY*MFLVKV Trigger: AACTTTCACAAGAAACATTCAATATAAAGGAGGCCC...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTCTGAGTTTCTTGTGCTaGTTGGCATTTAAAAACACA | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVLSFLC*LAFKNT Trigger: TGTGTTTTTAAATGCCAAGCAGCACAAGAAACTCAG...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGTTCTGGTTTTATAATTaGACGTCCACAAATGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKFWFYN*TSTNEC Trigger: GCACTCATTTGTGGACGTCCAATTATAAAACCAGAA...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGTGTGGTCATATTCACTaGAGCACTTGGGATTATTTT | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKCGHIH*STWDYF Trigger: AAAATAATCCCAAGTGCTCCAGTGAATATGACCACA...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGATCTTTACTTCTTCTaGTCTTTCACTCAAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVDLYFF*SFTQRH Trigger: ATGCCTTTGAGTGAAAGACCAGAAGAAGTAAAGATC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR GCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGACGTCCACAAATGAGTaGACATATAGTTTTAATGGT | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKTSTNE*TYSFNG Trigger: ACCATTAAAACTATATGTGCACTCATTTGTGGACGT...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTGGTTCATCAATGGGTaGGTAAAAACTTTCAATATC | + |
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Preference number: 4 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVWFING*VKTFNI Trigger: GATATTGAAAGTTTTTACCCACCCATTGATGAACCA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS-3UTR CCA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTCTTGTGCTGCTTaGCATTTAAAAACACAAATG | + |
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Preference number: 4 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKVSCAA*HLKTQM Trigger: CATTTGTGTTTTTAAATGCCAAGCAGCACAAGAAAC...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CCA 90 bp | GTTTTTCCTCCCAACAACGTACTCCACGCCGGCCAAAAGTCGGTATaGTTCTCCTGGAGCCGCACCGGCGGCCGGGAGCAGCTTCCACAT | + |
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Preference number: 5 (lower is better) Translates to: VFPPNNVLHAGQKSV*FSWSRTGGREQLPH Trigger: ATGTGGAAGCTGCTCCCGGCCGCCGGTGCGGCTCCAGGAGAACCATACCGACTTTTGGCCGGCGTGGAGTACGTTGTTGGGAGGAAAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS TCA 90 bp | CTTTTCTCTTTCATCTTCTTGAAGAGCGCTGTTGCTTTCCGGCTCTaGTCCACCATTCAGGGGCCGATTCCTCTCTGCGTCCATCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LFSFIFLKSAVAFRL*STIQGPIPLCVHPW Trigger: CCAAGGATGGACGCAGAGAGGAATCGGCCCCTGAATGGTGGATCAGAGCCGGAAAGCAACAGCGCTCTTCAAGAAGATGAAAGAGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS GCA 90 bp | TGTCGGCTTCCCTGTCCAGGGTCGCATTCTGAGACTGATGCTCCTTaGTTTTCCACAGTGAGGGTCCGGCAGGTTGTGTTTGTTCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: CRLPCPGSHSETDAP*FSTVRVRQVVFVLK Trigger: TTTTAGAACAAACACAACCTGCCGGACCCTCACTGTGGAAAAGCAAGGAGCATCAGTCTCAGAATGCGACCCTGGACAGGGAAGCCGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CCA 90 bp | GGACAGCTCTGGGTTGTCTTCATCCCTTTCCCTTTTTCTGGTGCATaGCTGGAAGTAGTTTTTGATGGAGTTCTGCTGCTGCTGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GQLWVVFIPFPFSGA*LEVVFDGVLLLLRS Trigger: ACTTCTCAGCAGCAGCAGAACTCCATCAAAAACTACTTCCAGCCATGCACCAGAAAAAGGGAAAGGGATGAAGACAACCCAGAGCTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CCA 90 bp | CGGCAGGTTGTGTTTGTTCTAAAAGAGAACAGGACAGCTCCATCCTaGATGATTTGCACGAGGACAGCTCTGGGTTGTCTTCATCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQVVFVLKENRTAPS*MICTRTALGCLHPF Trigger: AAAGGGATGAAGACAACCCAGAGCTGTCCTCGTGCAAATCATCCAGGATGGAGCTGTCCTGTTCTCTTTTAGAACAAACACAACCTGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS TCA 90 bp | AATTCAGTCAGCAGCAGTTTCCGTGGCAGCTCCTCACTGCTGTCCTaGAGACCATCACTATTAGCTATTTCATGTTTTGTTGACCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSVSSSFRGSSSLLS*RPSLLAISCFVDHD Trigger: GTCGTGGTCAACAAAACATGAAATAGCTAATAGTGATGGTCTTCAGGACAGCAGTGAGGAGCTGCCACGGAAACTGCTGCTGACTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS GCA 90 bp | GTGTTTGTTCTAAAAGAGAACAGGACAGCTCCATCCTGGATGATTTaGACGAGGACAGCTCTGGGTTGTCTTCATCCCTTTCCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFVLKENRTAPSWMI*TRTALGCLHPFPFF Trigger: GAAAAAGGGAAAGGGATGAAGACAACCCAGAGCTGTCCTCGTGCAAATCATCCAGGATGGAGCTGTCCTGTTCTCTTTTAGAACAAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CCA 90 bp | GCACATATAGTTTTAATGGTGACTTTAACTGCCGACATGACAAGGTaGGTACATTCTTCCGTCCAGTTGTTTGCGGTAAGTCCTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AHIVLMVTLTADMTR*VHSSVQLFAVSPPS Trigger: GCTTGGAGGACTTACCGCAAACAACTGGACGGAAGAATGTACCCACCTTGTCATGTCGGCAGTTAAAGTCACCATTAAAACTATATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CCA 90 bp | TCCTGTTTCAACCATTCTTCTAACTCGGTATTCTTTCGAGCATGGTaGCCTACTAAGTCTGATCCTCCGATGATGTGTGGAAGCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SCFNHSSNSVFFRAW*PTKSDPPMMCGSFP Trigger: AGGAAAGCTTCCACACATCATCGGAGGATCAGACTTAGTAGGCCACCATGCTCGAAAGAATACCGAGTTAGAAGAATGGTTGAAACAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS TCA 90 bp | TTCTTCTGGTCTTTCACTCAAAGGCATACATGTATCTGCTGGCTCTaGTTCTGTGTCAGCTACGTATGTGGTCATATTCACTGGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: FFWSFTQRHTCICWL*FCVSYVCGHIHWST Trigger: AGTGCTCCAGTGAATATGACCACATACGTAGCTGACACAGAATCAGAGCCAGCAGATACATGTATGCCTTTGAGTGAAAGACCAGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CCA 90 bp | TTCACTGGAGCACTTGGGATTATTTTTCCATTGGCTGACAGGACTTaGGAAAGGCTTGGTCCTGGAGTCGTTGTCTTTAATTCTGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: FTGALGIIFPLADRT*ERLGPGVVVFNSVQ Trigger: TTGTACAGAATTAAAGACAACGACTCCAGGACCAAGCCTTTCCCAAGTCCTGTCAGCCAATGGAAAAATAATCCCAAGTGCTCCAGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CCA 90 bp | GCATACATGTATCTGCTGGCTCTGATTCTGTGTCAGCTACGTATGTaGTCATATTCACTGGAGCACTTGGGATTATTTTTCCATTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYMYLLALILCQLRM*SYSLEHLGLFFHWL Trigger: CAGCCAATGGAAAAATAATCCCAAGTGCTCCAGTGAATATGACCACATACGTAGCTGACACAGAATCAGAGCCAGCAGATACATGTATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CCA 90 bp | ATCAACATCTTTTCTTTTTCTGGGTCTAAGAGTTTCTGTGGGAAGTaGTTTCCTGTCAGGACTCTTCCTGTTGAGTTCTATGTCCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: INIFSFSGSKSFCGK*FPVRTLPVEFYVHP Trigger: GGGATGGACATAGAACTCAACAGGAAGAGTCCTGACAGGAAACCACTTCCCACAGAAACTCTTAGACCCAGAAAAAGAAAAGATGTTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS CCA 90 bp | ATTTCCTGTTTCAACCATTCTTCTAACTCGGTATTCTTTCGAGCATaGTGGCCTACTAAGTCTGATCCTCCGATGATGTGTGGAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISCFNHSSNSVFFRA*WPTKSDPPMMCGSF Trigger: AAAGCTTCCACACATCATCGGAGGATCAGACTTAGTAGGCCACCATGCTCGAAAGAATACCGAGTTAGAAGAATGGTTGAAACAGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGAGGACAGCTCTGGGTaGTCTTCATCCCTTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVEDSSG*SSSLSL Trigger: AAGGGAAAGGGATGAAGACAACCCAGAGCTGTCCTC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS CCA 90 bp | AGTGGACCACATTCATTTACACATAGATTTCTGGAGGTGGAGTTGTaGTTACTGACAACCAATGACCTAAATTCAGTCAGCAGCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGPHSFTHRFLEVEL*LLTTNDLNSVSSSF Trigger: GAAACTGCTGCTGACTGAATTTAGGTCATTGGTTGTCAGTAACCACAACTCCACCTCCAGAAATCTATGTGTAAATGAATGTGGTCCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCATTCTTCCGTCCAGTaGTTTGCGGTAAGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKHSSVQ*FAVSPP Trigger: TGGAGGACTTACCGCAAACAACTGGACGGAAGAATG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS TCA 90 bp | ACAGGGAAGTTTACTGTTAAGACAGCATGGTTTCGACTGATTGACTaGTCATTTTCAATCAGAATGCCACAGTTTTTCCTCCCAACAACG | + |
|
Preference number: 5 (lower is better) Translates to: TGKFTVKTAWFRLID*SFSIRMPQFFLPTT Trigger: CGTTGTTGGGAGGAAAAACTGTGGCATTCTGATTGAAAATGATCAGTCAATCAGTCGAAACCATGCTGTCTTAACAGTAAACTTCCCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGCCGAGCTGAGTTTCTaGTGCTGCTTGGCATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVAELSF*CCLAFK Trigger: TTTAAATGCCAAGCAGCACAAGAAACTCAGCTCGGC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTCAGGACTCTTCCTGTaGAGTTCTATGTCCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVSGLFL*SSMSIP Trigger: TGGGATGGACATAGAACTCAACAGGAAGAGTCCTGA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS TCA 90 bp | AACTGGTTACAGGGAAGTTTACTGTTAAGACAGCATGGTTTCGACTaGTTGACTGATCATTTTCAATCAGAATGCCACAGTTTTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NWLQGSLLLRQHGFD*LTDHFQSECHSFSS Trigger: GGAGGAAAAACTGTGGCATTCTGATTGAAAATGATCAGTCAATCAGTCGAAACCATGCTGTCTTAACAGTAAACTTCCCTGTAACCAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTAAGTTTCCTAGAGCTTaGTTCCAGTCCAGGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVKFPRA*FQSRDL Trigger: AAGATCCCTGGACTGGAACAAAGCTCTAGGAAACTT...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCTTTTCAACCTTCACTaGAACTGCCAACTCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKLFNLH*NCQLWL Trigger: AAGCCAGAGTTGGCAGTTCAAGTGAAGGTTGAAAAG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS TCA 90 bp | ACTGCTGTCCTGAAGACCATCACTATTAGCTATTTCATGTTTTGTTaGCCACGACTCTGTCTGAAGTTCATCTTTCTTTTCTCTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TAVLKTITISYFMFC*PRLCLKFIFLFSFI Trigger: GATGAAAGAGAAAAGAAAGATGAACTTCAGACAGAGTCGTGGTCAACAAAACATGAAATAGCTAATAGTGATGGTCTTCAGGACAGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTTGGTCCTGGAGTCGTaGTCTTTAATTCTGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVLVLES*SLILYK Trigger: CTTGTACAGAATTAAAGACAACGACTCCAGGACCAA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTCAACAGGAAATTTCATaGGAGAAAGCTGATAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVQQEIS*EKADSS Trigger: CGAGCTATCAGCTTTCTCCAATGAAATTTCCTGTTG...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGTTCTCTTTCATCTTCTaGAAGAGCGCTGTTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKFSFIF*KSAVAF Trigger: GAAAGCAACAGCGCTCTTCAAGAAGATGAAAGAGAA...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTTTCCTCCTTTGCTTGTaGTTTCTGTACCTCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVFLLCL*FLYLHF Trigger: GAAATGGAGGTACAGAAACAACAAGCAAAGGAGGAA...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGCAAGAGATTCCTCCTTaGCTTGTTGTTTCTGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKQEIPP*LVVSVP Trigger: AGGTACAGAAACAACAAGCAAAGGAGGAATCTCTTG...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGTATTCACTGGAGCACTaGGGATTATTTTTCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKYSLEH*GLFFHW Trigger: CCAATGGAAAAATAATCCCAAGTGCTCCAGTGAATA...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGGGGCCTCCTTTATATaGAATGTTTCTTGTGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVGASFI*NVSCES Trigger: ACTTTCACAAGAAACATTCAATATAAAGGAGGCCCC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTCTATTTCATGTTTTGTaGACCACGACTCTGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVLFHVL*TTTLSE Trigger: TTCAGACAGAGTCGTGGTCAACAAAACATGAAATAG...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGCCTTCTTGAATTTCTaGAAATTCTTCAGTGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKAFLNF*KFFSGP Trigger: TGGTCCACTGAAGAATTTCAAGAAATTCAAGAAGGC...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS GCA 90 bp | ATTAGGATTATATCTAAACAGATCATCAGCAAGAGATTCCTCCTTTaGTTGTTGTTTCTGTACCTCCATTTCCTGTTTCAACCATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IRIISKQIISKRFLL*LLFLYLHFLFQPFF Trigger: GAAGAATGGTTGAAACAGGAAATGGAGGTACAGAAACAACAAGCAAAGGAGGAATCTCTTGCTGATGATCTGTTTAGATATAATCCTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | ATGTATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGTCTGAGACCATTCCTTaGAAGTGTATCCATTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: MYLSWSEVEMCFYSFLYKSETIP*KCIHYQ Trigger: TTGATAATGGATACACTTCAAAGGAATGGTCTCAGA...CTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS-3UTR CAA 90 bp | TATCTCAGTTGGTCTGAAGTAGAAATGTGTTTCTACAGCTTCCTTTACAAGGTTGGAAATGTCGCCTTCTaGAATTTCTTGAAATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YLSWSEVEMCFYSFLYKVGNVAF*NFLKFF Trigger: GAAGAATTTCAAGAAATTCAAGAAGGCGACATTTCC...AACCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS CCA 72 bp | CCCAACAACGTACTCCACGCCGGCCAAAAGTCGGTATaGTTCTCCTGGAGCCGCACCGGCGGCCGGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PNNVLHAGQKSV*FSWSRTGGREQ Trigger: CTGCTCCCGGCCGCCGGTGCGGCTCCAGGAGAACCATACCGACTTTTGGCCGGCGTGGAGTACGTTGTTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CCA 72 bp | GTACTCCACGCCGGCCAAAAGTCGGTATGGTTCTCCTaGAGCCGCACCGGCGGCCGGGAGCAGCTTCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: VLHAGQKSVWFS*SRTGGREQLPH Trigger: ATGTGGAAGCTGCTCCCGGCCGCCGGTGCGGCTCCAGGAGAACCATACCGACTTTTGGCCGGCGTGGAGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS GCA 72 bp | CCCTGTCCAGGGTCGCATTCTGAGACTGATGCTCCTTaGTTTTCCACAGTGAGGGTCCGGCAGGTTGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PCPGSHSETDAP*FSTVRVRQVVF Trigger: AAACACAACCTGCCGGACCCTCACTGTGGAAAAGCAAGGAGCATCAGTCTCAGAATGCGACCCTGGACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS TCA 72 bp | TTCATCTTCTTGAAGAGCGCTGTTGCTTTCCGGCTCTaGTCCACCATTCAGGGGCCGATTCCTCTCTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FIFLKSAVAFRL*STIQGPIPLCV Trigger: GACGCAGAGAGGAATCGGCCCCTGAATGGTGGATCAGAGCCGGAAAGCAACAGCGCTCTTCAAGAAGATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS CAA 72 bp | CTGACAGGACTTGGGAAAGGCTTGGTCCTGGAGTCGTaGTCTTTAATTCTGTACAAGGCTGGCCCTGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LTGLGKGLVLES*SLILYKAGPAD Trigger: ATCCGCAGGGCCAGCCTTGTACAGAATTAAAGACAACGACTCCAGGACCAAGCCTTTCCCAAGTCCTGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CAA 90 bp | CTAAGAGTTTCTGTGGGAAGTGGTTTCCTGTCAGGACTCTTCCTGTaGAGTTCTATGTCCATCCCACCCACAGATGAGGTGTCGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRVSVGSGFLSGLFL*SSMSIPPTDEVSAS Trigger: GGAAGCCGACACCTCATCTGTGGGTGGGATGGACATAGAACTCAACAGGAAGAGTCCTGACAGGAAACCACTTCCCACAGAAACTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS TCA 72 bp | GCCTGGCTTCTCCACCTCCGAAAGCAACTGCCGAGCTaGGTTTCTTGTGCTGCTTGGCATTTAAAAACACAA | + |
|
Preference number: 6 (lower is better) Translates to: AWLLHLRKQLPS*VSCAAWHLKTQ Trigger: TTGTGTTTTTAAATGCCAAGCAGCACAAGAAACTCAGCTCGGCAGTTGCTTTCGGAGGTGGAGAAGCCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS CAA 90 bp | TTCCATTGGCTGACAGGACTTGGGAAAGGCTTGGTCCTGGAGTCGTaGTCTTTAATTCTGTACAAGGCTGGCCCTGCGGATTACAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FHWLTGLGKGLVLES*SLILYKAGPADYSN Trigger: ATTACTGTAATCCGCAGGGCCAGCCTTGTACAGAATTAAAGACAACGACTCCAGGACCAAGCCTTTCCCAAGTCCTGTCAGCCAATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS GCA 72 bp | CTAAAAGAGAACAGGACAGCTCCATCCTGGATGATTTaGACGAGGACAGCTCTGGGTTGTCTTCATCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LKENRTAPSWMI*TRTALGCLHPF Trigger: AAAGGGATGAAGACAACCCAGAGCTGTCCTCGTGCAAATCATCCAGGATGGAGCTGTCCTGTTCTCTTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS GCA 72 bp | CTTTCTTTTCTCTTTCATCTTCTTGAAGAGCGCTGTTaGTTTCCGGCTCTGATCCACCATTCAGGGGCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSFLFHLLEERC*FPALIHHSGAD Trigger: ATCGGCCCCTGAATGGTGGATCAGAGCCGGAAAGCAACAGCGCTCTTCAAGAAGATGAAAGAGAAAAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
||
| CDS CAA 72 bp | TCTAAAAGAGAACAGGACAGCTCCATCCTGGATGATTaGCACGAGGACAGCTCTGGGTTGTCTTCATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SKREQDSSILDD*HEDSSGLSSSL Trigger: AAGGGATGAAGACAACCCAGAGCTGTCCTCGTGCAAATCATCCAGGATGGAGCTGTCCTGTTCTCTTTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
||
| CDS TCA 72 bp | ATGGTGTCATCTGCCTCCTGCTTTTCAACCTTCACTTaGACTGCCAACTCTGGCTTTGTACTCCTCAGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: MVSSASCFSTFT*TANSGFVLLSN Trigger: GTTACTGAGGAGTACAAAGCCAGAGTTGGCAGTTCAAGTGAAGGTTGAAAAGCAGGAGGCAGATGACACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CCA 72 bp | TGGGTTGTCTTCATCCCTTTCCCTTTTTCTGGTGCATaGCTGGAAGTAGTTTTTGATGGAGTTCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WVVFIPFPFSGA*LEVVFDGVLLL Trigger: CAGCAGCAGAACTCCATCAAAAACTACTTCCAGCCATGCACCAGAAAAAGGGAAAGGGATGAAGACAACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS CAA 72 bp | GTCATATTCACTGGAGCACTTGGGATTATTTTTCCATaGGCTGACAGGACTTGGGAAAGGCTTGGTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VIFTGALGIIFP*ADRTWERLGPG Trigger: TCCAGGACCAAGCCTTTCCCAAGTCCTGTCAGCCAATGGAAAAATAATCCCAAGTGCTCCAGTGAATATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS CAA 90 bp | TGTGTTTGTTCTAAAAGAGAACAGGACAGCTCCATCCTGGATGATTaGCACGAGGACAGCTCTGGGTTGTCTTCATCCCTTTCCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: CVCSKREQDSSILDD*HEDSSGLSSSLSLF Trigger: AAAAAGGGAAAGGGATGAAGACAACCCAGAGCTGTCCTCGTGCAAATCATCCAGGATGGAGCTGTCCTGTTCTCTTTTAGAACAAACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS TCA 72 bp | AGCAGCAGTTTCCGTGGCAGCTCCTCACTGCTGTCCTaGAGACCATCACTATTAGCTATTTCATGTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SSSFRGSSSLLS*RPSLLAISCFV Trigger: AACAAAACATGAAATAGCTAATAGTGATGGTCTTCAGGACAGCAGTGAGGAGCTGCCACGGAAACTGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CCA 72 bp | GCACTTGGGATTATTTTTCCATTGGCTGACAGGACTTaGGAAAGGCTTGGTCCTGGAGTCGTTGTCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: ALGIIFPLADRT*ERLGPGVVVFN Trigger: ATTAAAGACAACGACTCCAGGACCAAGCCTTTCCCAAGTCCTGTCAGCCAATGGAAAAATAATCCCAAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS CCA 72 bp | AACCATTCTTCTAACTCGGTATTCTTTCGAGCATGGTaGCCTACTAAGTCTGATCCTCCGATGATGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: NHSSNSVFFRAW*PTKSDPPMMCG Trigger: TCCACACATCATCGGAGGATCAGACTTAGTAGGCCACCATGCTCGAAAGAATACCGAGTTAGAAGAATGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CCA 72 bp | GTTTTAATGGTGACTTTAACTGCCGACATGACAAGGTaGGTACATTCTTCCGTCCAGTTGTTTGCGGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: VLMVTLTADMTR*VHSSVQLFAVS Trigger: ACTTACCGCAAACAACTGGACGGAAGAATGTACCCACCTTGTCATGTCGGCAGTTAAAGTCACCATTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS CCA 72 bp | AGAGCTTTGTTCCAGTCCAGGGATCTTTACTTCTTCTaGTCTTTCACTCAAAGGCATACATGTATCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RALFQSRDLYFF*SFTQRHTCICW Trigger: CCAGCAGATACATGTATGCCTTTGAGTGAAAGACCAGAAGAAGTAAAGATCCCTGGACTGGAACAAAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS CCA 72 bp | TTCAACCATTCTTCTAACTCGGTATTCTTTCGAGCATaGTGGCCTACTAAGTCTGATCCTCCGATGATGTGT | + |
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Preference number: 6 (lower is better) Translates to: FNHSSNSVFFRA*WPTKSDPPMMC Trigger: ACACATCATCGGAGGATCAGACTTAGTAGGCCACCATGCTCGAAAGAATACCGAGTTAGAAGAATGGTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CCA 72 bp | TATCTGCTGGCTCTGATTCTGTGTCAGCTACGTATGTaGTCATATTCACTGGAGCACTTGGGATTATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: YLLALILCQLRM*SYSLEHLGLFF Trigger: GAAAAATAATCCCAAGTGCTCCAGTGAATATGACCACATACGTAGCTGACACAGAATCAGAGCCAGCAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS CAA 90 bp | GCTACGTTGTTAGCTTTGGAGCTTGGTTTAGGGGCCTCCTTTATATaGAATGTTTCTTGTGAAAGTTTCCTAGAGCTTTGTTCCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ATLLALELGLGASFI*NVSCESFLELCSSP Trigger: TGGACTGGAACAAAGCTCTAGGAAACTTTCACAAGAAACATTCAATATAAAGGAGGCCCCTAAACCAAGCTCCAAAGCTAACAACGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS GCA 72 bp | AATGAGTGCACATATAGTTTTAATGGTGACTTTAACTaGCGACATGACAAGGTGGGTACATTCTTCCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: NECTYSFNGDFN*RHDKVGTFFRP Trigger: TGGACGGAAGAATGTACCCACCTTGTCATGTCGGCAGTTAAAGTCACCATTAAAACTATATGTGCACTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS CCA 72 bp | TTTTCTTTTTCTGGGTCTAAGAGTTTCTGTGGGAAGTaGTTTCCTGTCAGGACTCTTCCTGTTGAGTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: FSFSGSKSFCGK*FPVRTLPVEFY Trigger: ATAGAACTCAACAGGAAGAGTCCTGACAGGAAACCACTTCCCACAGAAACTCTTAGACCCAGAAAAAGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CAA 90 bp | TGTGGAAGCTTTCCTGCCCCAGGAAATGTCGCCTTCTTGAATTTCTaGAAATTCTTCAGTGGACCACATTCATTTACACATAGATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: CGSFPAPGNVAFLNF*KFFSGPHSFTHRFL Trigger: CAGAAATCTATGTGTAAATGAATGTGGTCCACTGAAGAATTTCAAGAAATTCAAGAAGGCGACATTTCCTGGGGCAGGAAAGCTTCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CCA 72 bp | CATTCATTTACACATAGATTTCTGGAGGTGGAGTTGTaGTTACTGACAACCAATGACCTAAATTCAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: HSFTHRFLEVEL*LLTTNDLNSVS Trigger: GCTGACTGAATTTAGGTCATTGGTTGTCAGTAACCACAACTCCACCTCCAGAAATCTATGTGTAAATGAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CAA 72 bp | CCACATTCATTTACACATAGATTTCTGGAGGTGGAGTaGTGGTTACTGACAACCAATGACCTAAATTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: PHSFTHRFLEVE*WLLTTNDLNSV Trigger: GACTGAATTTAGGTCATTGGTTGTCAGTAACCACAACTCCACCTCCAGAAATCTATGTGTAAATGAATGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CAA 72 bp | TTTCCTGCCCCAGGAAATGTCGCCTTCTTGAATTTCTaGAAATTCTTCAGTGGACCACATTCATTTACACAT | + |
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Preference number: 6 (lower is better) Translates to: FPAPGNVAFLNF*KFFSGPHSFTH Trigger: ATGTGTAAATGAATGTGGTCCACTGAAGAATTTCAAGAAATTCAAGAAGGCGACATTTCCTGGGGCAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS CAA 72 bp | AAACAGATCATCAGCAAGAGATTCCTCCTTTGCTTGTaGTTTCTGTACCTCCATTTCCTGTTTCAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: KQIISKRFLLCL*FLYLHFLFQPF Trigger: GAATGGTTGAAACAGGAAATGGAGGTACAGAAACAACAAGCAAAGGAGGAATCTCTTGCTGATGATCTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS TCA 72 bp | TTTACTGTTAAGACAGCATGGTTTCGACTGATTGACTaGTCATTTTCAATCAGAATGCCACAGTTTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FTVKTAWFRLID*SFSIRMPQFFL Trigger: GAGGAAAAACTGTGGCATTCTGATTGAAAATGATCAGTCAATCAGTCGAAACCATGCTGTCTTAACAGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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| CDS TCA 72 bp | CTGAAGACCATCACTATTAGCTATTTCATGTTTTGTTaGCCACGACTCTGTCTGAAGTTCATCTTTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LKTITISYFMFC*PRLCLKFIFLF Trigger: GAAAAGAAAGATGAACTTCAGACAGAGTCGTGGTCAACAAAACATGAAATAGCTAATAGTGATGGTCTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029879.15 |
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| CDS GCA 72 bp | GTATTCTGGTTTTATAATTGGACGTCCACAAATGAGTaGACATATAGTTTTAATGGTGACTTTAACTGCCGA | + |
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Preference number: 6 (lower is better) Translates to: VFWFYNWTSTNE*TYSFNGDFNCR Trigger: TCGGCAGTTAAAGTCACCATTAAAACTATATGTGCACTCATTTGTGGACGTCCAATTATAAAACCAGAATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029879.15 ENSMUST00000149069.2 |
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