RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NBEAL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056724

Ensembl transcript IDs: ENSMUST00000123996.2, ENSMUST00000130024.2, ENSMUST00000131017.8, ENSMUST00000133191.8, ENSMUST00000149089.2, ENSMUST00000167320.8, ENSMUST00000196488.5

Found 1238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTAGGCCACGTTTATTGCTGAGAATGGGCAGCGATAGTCACCTTTaGGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGT +
Preference number: 1 (lower is better)
Translates to: TRPRLLLRMGSDSHL*GLRPQVVFVLSLGR
Trigger: ACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGGTGACTATCGCTGCCCATTCTCAGCAATAAACGTGGCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
3UTR-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGCCCCGCCCACCCCCTaGTGCAGTAGTCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDAPPTP*CSSLLG
Trigger: GCCCAGGAGACTACTGCACCAGGGGGTGGGCGGGGC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
3UTR-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCATCTACCAATCCCTaGGCTGGAGGGTGGGCCCCG +
Preference number: 2 (lower is better)
Translates to: AAAASEADARSPLSRRGAPSTNP*AGGWAP
Trigger: CGGGGCCCACCCTCCAGCTCAGGGATTGGTAGATGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
3UTR-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGTGCAGTAGTCTCCTaGGCAGAGAATCAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: AAAASEADARSPLSRRGAGAVVS*AENQAR
Trigger: CCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
3UTR-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGCCCCGCCCACCCCCTaGTGCAGTAGTCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSAPPTP*CSSLLG
Trigger: GCCCAGGAGACTACTGCACCAGGGGGTGGGCGGGGC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
3UTR-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTACCAATCCCTGAGCTaGAGGGTGGGCCCCGCCCAC +
Preference number: 2 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDYQSLS*RVGPAH
Trigger: GTGGGCGGGGCCCACCCTCCAGCTCAGGGATTGGTA...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
3UTR-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCCATCTACCAATCCCTaGGCTGGAGGGTGGGCCCCG +
Preference number: 2 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPPSTNP*AGGWAP
Trigger: CGGGGCCCACCCTCCAGCTCAGGGATTGGTAGATGG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
3UTR-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGGTGCAGTAGTCTCCTaGGCAGAGAATCAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPGAVVS*AENQAR
Trigger: CCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
3UTR-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTCCCACCCCAGATTGTaGAAAATATGCAGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDSHPRL*KICSSG
Trigger: GCCGCTGCTGCATATTTTGCACAATCTGGGGTGGGA...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
3UTR CAA 90 bp ATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTaGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGC +
Preference number: 2 (lower is better)
Translates to: IKATGGLCAFTGTWD*KVGIPSHPRLCKIC
Trigger: GCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
3UTR CCA 72 bp GGTGGGCCCCGCCCACCCCCTGGTGCAGTAGTCTCCTaGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTC +
Preference number: 3 (lower is better)
Translates to: GGPRPPPGAVVS*AENQARAGSDV
Trigger: GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGGGGGTGGGCGGGGCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
3UTR TCA 72 bp CGTTTATTGCTGAGAATGGGCAGCGATAGTCACCTTTaGGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCA +
Preference number: 3 (lower is better)
Translates to: RLLLRMGSDSHL*GLRPQVVFVLS
Trigger: TGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGGTGACTATCGCTGCCCATTCTCAGCAATAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCAGCGGGGAGGGTGTaGCAGGCTGGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPAGRV*QAGWPE
Trigger: CTCCGGCCAGCCAGCCTGGCACACCCTCCCCGCTGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCGGCCTCGGCCTCCTaGGGCTGCACAGCCACTCGC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPASAS*GCTATR
Trigger: GCGAGTGGCTGTGCAGCCCCAGGAGGCCGAGGCCGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCACGGGCGGCACCATaGTGCCAGCCATGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAARAAP*CQPCWA
Trigger: CGCCCAGCATGGCTGGCATCATGGTGCCGCCCGTGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGTGCAGGACCCCGGTaGCGGGCCATGCCCGACAGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGRAGPR*RAMPDS
Trigger: ACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTGGATACGGTCCCGCTaGTGCCGCTGCCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDWIRSR*CRCPLL
Trigger: GAGCAGCGGGCAGCGGCATCAGCGGGACCGTATCCA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCTCTCCAGCCGTGCCTaGCAGGCTGCTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGALSSRA*QAAATE
Trigger: CTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCTCCTGGCCACCGCTaGACGGGCGGCACCATGATG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAAPGHR*TGGTMM
Trigger: CATCATGGTGCCGCCCGTGCAGCGGTGGCCAGGAGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCGGCGGGTCGGCACTaGGGTCTGCAGCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPAGRH*GLQQCV
Trigger: CACACACTGCTGCAGACCGCAGTGCCGACCCGCCGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATGGACCTCACGCAGCTaGGCCAAGGGGCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGWTSRS*AKGRRK
Trigger: CTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGCCTCCTCGGCCGCTaGACCCCGCTGCTTATAGCC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAGLLGR*TPLLIA
Trigger: GGCTATAAGCAGCGGGGTCCAGCGGCCGAGGAGGCC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCAGCCCAGGCCTGTaGAGGCTGGGACTGACTGGG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPSPGL*RLGLTG
Trigger: CCCAGTCAGTCCCAGCCTCCACAGGCCTGGGCTGGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCCAGCCCAGGCCTGTaGAGGCTGGGACTGACTGGG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPSPGL*RLGLTG
Trigger: CCCAGTCAGTCCCAGCCTCCACAGGCCTGGGCTGGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGCGGCCTTGGGCAGTTaGGAAGGGCCGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDAALGS*EGPWPI
Trigger: GATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCGAACGCCGCAGGTTaGAACGCCGCAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPNAAG*NAAGGP
Trigger: AGGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCGCGTCAGCACATCCTaGCAGCCAGCTTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDRVSTS*QPACRA
Trigger: GGCCCGACAAGCTGGCTGGCAGGATGTGCTGACGCG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCGTGCCTGCCAGGCTaGTGCCACCGAGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPCLPG*CHRVEL
Trigger: CAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCCAGCGGGGAGGGTGTaGCAGGCTGGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGPAGRV*QAGWPE
Trigger: CTCCGGCCAGCCAGCCTGGCACACCCTCCCCGCTGG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGGTAGAGCTGGGGCCTaGGAGCCTGGCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDGRAGA*EPGKGM
Trigger: CATCCCCTTGCCAGGCTCCCAGGCCCCAGCTCTACC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCCGGGCGAGGCGATTaGCTGCTTCCTCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAGRGD*LLPQPR
Trigger: TCTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGAGGCTGGGACTGACTaGGAGCGGGTGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDEAGTD*ERVREG
Trigger: CCCTTCCCTCACCCGCTCCCAGTCAGTCCCAGCCTC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCCCACCGAGTGTCCTaGGTGCCTGCGAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAPHRVS*VPARVE
Trigger: CTCTACCCTCGCAGGCACCCAGGACACTCGGTGGGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCGGCCATCCAGCCCATaGCCAGGGGACAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARPSSP*PGDRSR
Trigger: TCTGGACCTGTCCCCTGGCCATGGGCTGGATGGCCG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGAGCTGTGGCGGCCTTaGGCAGTTGGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGELWRP*AVGKGR
Trigger: ACGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCTGCTGGGAAAGGTTaGCCAGGCCTCCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPAGKG*PGLLGE
Trigger: CTCCCCCAGGAGGCCTGGCCAACCTTTCCCAGCAGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCTAGGACCAGCTCCTTaGAGGCCCGCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDLGPAP*RPADSG
Trigger: TCCAGAGTCGGCGGGCCTTCAAGGAGCTGGTCCTAG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGACTCACGCCACTGTCTaGGACCCAGGGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGATHATV*DPGPTQ
Trigger: CTGAGTGGGCCCTGGGTCTCAGACAGTGGCGTGAGT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCTGGGGGAGCCTCCTTaGTGTCGGTCAGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGALGEPP*CRSGLT
Trigger: AGTCAGCCCTGACCGACATCAAGGAGGCTCCCCCAG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAGCAGTGCCGTCGAGTaGTGCGCTGCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGSSAVE*CAACCF
Trigger: GAAGCAGCAGGCAGCGCAGCACTCGACGGCACTGCT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCAGCCAGGTATGAGTaGCCAGCAGCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAARYE*PAAHWH
Trigger: GTGCCAGTGGGCTGCTGGGCACTCATACCTGGCTGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGGCACTTCCGCACCTaGCTCCTCTGGCCTTCGAGG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARHFRT*LLWPSR
Trigger: CCTCGAAGGCCAGAGGAGGCAGGTGCGGAAGTGCCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCACCAGGCCTGCTTaGACACAGGTGGTGCGACTG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPTRPA*TQVVRL
Trigger: CAGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCGTGCAGGACCCCGGTaGCGGGCCATGCCCGACAGT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGRAGPR*RAMPDS
Trigger: ACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCATCAGCAGCCGCCTaGTCCATCAGCAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPSAAA*SISSWA
Trigger: TGCCCAGCTGCTGATGGAGCAGGCGGCTGCTGATGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCATCAGCAGCCGCCTaGTCCATCAGCAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAPSAAA*SISSWA
Trigger: TGCCCAGCTGCTGATGGAGCAGGCGGCTGCTGATGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTGAAACGCCGCAGGTaGACCTCACGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDLKRRR*TSRSWA
Trigger: GGCCCAGCTGCGTGAGGTCCACCTGCGGCGTTTCAA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATTGAAACGCCGCAGGTaGACCTCACGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGLKRRR*TSRSWA
Trigger: GGCCCAGCTGCGTGAGGTCCACCTGCGGCGTTTCAA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCTGCTGCCACCGAGTaGAACTGCCGGTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAAATE*NCRSEQ
Trigger: CTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCACAGTCAGGGCTGTaGGCTGCTCCGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAPQSGL*AAPSGS
Trigger: TGACCCTGACGGAGCAGCCCACAGCCCTGACTGTGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCGGGCACATGCACAATaGCCACGCAGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARAHAQ*PRSARQ
Trigger: CTGCCTGGCACTGCGTGGCCATTGTGCATGTGCCCG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGGGTGCCCACCACCTaGCCATCGTCACCGGTAGCT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARVPTT*PSSPVA
Trigger: AGCTACCGGTGACGATGGCCAGGTGGTGGGCACCCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGTGTCTAGGCGGACACTaGGGTCAGCCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGACLGGH*GQPGGT
Trigger: TGTCCCTCCAGGCTGACCTCAGTGTCCGCCTAGACA...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCACTGCCAGAGGCAGTaGGGTCTCCTCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDHCQRQ*GLLSGC
Trigger: ACACCCACTGAGGAGACCTCACTGCCTCTGGCAGTG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTAGCCTGGCAAGGGGATaGCGCAGAGGACGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGSLARG*RRGRGH
Trigger: GTGGCCGCGTCCTCTGCGTCATCCCCTTGCCAGGCT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCTCCGTCAGGGTCACTaGAGCCCGCAACCTCCCATT +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDLRQGH*SPQPPI
Trigger: AATGGGAGGTTGCGGGCTTCAGTGACCCTGACGGAG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTCCGTCAGGGTCACTaGAGCCCGCAACCTCCCATT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGLRQGH*SPQPPI
Trigger: AATGGGAGGTTGCGGGCTTCAGTGACCCTGACGGAG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAGGCCCACCAGCACATaGCTGCGCTCCTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDRPTST*LRSLVT
Trigger: TGTGACCAAGGAGCGCAGTCATGTGCTGGTGGGCCT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAACATTGACCAGGTTCTaGCTGAAGGGTCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGTLTRF*LKGRRP
Trigger: CGGGCGCCGACCCTTCAGTCAGAACCTGGTCAATGT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTAGGAGGCTGCGCTTaGTGCAGTCTGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGLGGCA*CSLVVA
Trigger: TGCGACCACCAGACTGCATCAAGCGCAGCCTCCTAG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAGTGCCGTCGAGTGCTaGGCTGCCTGCTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGSAVEC*AACCFS
Trigger: ACTGAAGCAGCAGGCAGCGCAGCACTCGACGGCACT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACATCAGGGACTCCAGTaGAGCCAGGTCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGHQGLQ*SQVLFP
Trigger: GGGGAAGAGGACCTGGCTGCACTGGAGTCCCTGATG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCGCTCCCGTTCATCTaGCACGTGGTCCAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAPLPFI*HVVQVN
Trigger: GTTGACCTGGACCACGTGGCAGATGAACGGGAGCGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCGCTCCCGTTCATCTaGCACGTGGTCCAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPLPFI*HVVQVN
Trigger: GTTGACCTGGACCACGTGGCAGATGAACGGGAGCGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATCCGCGCGAACTGGCTaGTGCGTACCTCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGSARTG*CVPQKA
Trigger: AGCCTTCTGAGGTACGCAGCAGCCAGTTCGCGCGGA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCACTGCACCCACCAGTaGTCTCAGAGCCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAHCTHQ*SQSQWH
Trigger: GTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCACTGCACCCACCAGTaGTCTCAGAGCCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDHCTHQ*SQSQWH
Trigger: GTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGGGGTCCGTGGCTCTaGAGGACCTCCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGGPWL*RTSCRC
Trigger: GCACCTGCAGGAGGTCCTGCAGAGCCACGGACCCCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGTGGAGGTGGGTGCATaGTGTGGTCACCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDVEVGA*CGHPPQ
Trigger: CTGTGGAGGGTGACCACAGCATGCACCCACCTCCAC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGTGGAGGTGGGTGCATaGTGTGGTCACCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAVEVGA*CGHPPQ
Trigger: CTGTGGAGGGTGACCACAGCATGCACCCACCTCCAC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCACTGGCTGCTCGTTaGGGATTGGTGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAALAAR*GLVEVG
Trigger: ACCCACCTCCACCAATCCGCAACGAGCAGCCAGTGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCTTGCACACAGGTGGTaGGACTGGCAGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDLAHRW*DWQGSC
Trigger: ACAGCTGCCCTGCCAGTCGCACCACCTGTGTGCAAG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTGCACACAGGTGGTaGGACTGGCAGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGLAHRW*DWQGSC
Trigger: ACAGCTGCCCTGCCAGTCGCACCACCTGTGTGCAAG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGCTCCTGGCCACCGCTaGACGGGCGGCACCATGATG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGAPGHR*TGGTMM
Trigger: CATCATGGTGCCGCCCGTGCAGCGGTGGCCAGGAGC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGTGTCCTGGGTGCCTaGGAGGGTAGAGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGASVLGA*EGRADA
Trigger: AGCGTCAGCTCTACCCTCGCAGGCACCCAGGACACT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCTCAGGCTTGAAGGGTaGTGGCTCATTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGALRLEG*WLIGPQ
Trigger: CTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTCGGCCTCCTGGGGCTaGACAGCCACTCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGSASWG*TATRSS
Trigger: GCTGGAGCGAGTGGCTGTGCAGCCCCAGGAGGCCGA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAGCAGCCACAGTGCCTaGTGGGAAAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDSSHSA*WERLAR
Trigger: CCTGGCCAACCTTTCCCAGCAGGCACTGTGGCTGCT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGTCGGCACTGCGGTCTaGAGCAGTGTGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDVGTAV*SSVCSF
Trigger: GAAGCTGCACACACTGCTGCAGACCGCAGTGCCGAC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGGCGCCGGAAGTCATaGCCGATGCCTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAGRRKS*PMPSSV
Trigger: AACAGAGGAAGGCATCGGCCATGACTTCCGGCGCCC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAGGCTGCCATCCCAGTaGCCACCACTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGRLPSQ*PPLKSS
Trigger: GCTGCTCTTCAGTGGTGGCCACTGGGATGGCAGCCT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGGCTGCCATCCCAGTaGCCACCACTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARLPSQ*PPLKSS
Trigger: GCTGCTCTTCAGTGGTGGCCACTGGGATGGCAGCCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAGCCTCCGCGCGAACTaGCTGCTGCGTACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGSLRAN*LLRTSE
Trigger: TTCTGAGGTACGCAGCAGCCAGTTCGCGCGGAGGCT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGGTGGGTGCATGCTGTaGTCACCCTCCACAGCCATG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGGGCML*SPSTAM
Trigger: CATGGCTGTGGAGGGTGACCACAGCATGCACCCACC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACACCCTCCAGAGATGTaGGGCTTCCCCACCGAGTGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGHPPEM*GFPTEC
Trigger: ACACTCGGTGGGGAAGCCCCACATCTCTGGAGGGTG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGGCTTGAAGGGTGCTaGCTCATTGGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARLEGC*LIGPQA
Trigger: AGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGGCCCTGGCAGAGCTaGGGAGAGATGCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARPWQS*GEMLSS
Trigger: GGAAGAGAGCATCTCTCCCCAGCTCTGCCAGGGCCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGCACATTGGAGAGACTaGAGCTGTGGCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDAHWRD*SCGGLG
Trigger: CCCAAGGCCGCCACAGCTCCAGTCTCTCCAATGTGC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGCCACAGTGCCTGCTaGGAAAGGTTGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGASHSAC*ERLARP
Trigger: AGGCCTGGCCAACCTTTCCCAGCAGGCACTGTGGCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCTATTGGCGAGATGTaGCCAGGCTCCCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAAIGEM*PGSQAI
Trigger: GATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCTATTGGCGAGATGTaGCCAGGCTCCCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAIGEM*PGSQAI
Trigger: GATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCCATGGCTCTCCTGTaGGGATCCTTTCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPMALL*GSFQLS
Trigger: GCTGAGCTGAAAGGATCCTCACAGGAGAGCCATGGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCATGGCTCTCCTGTaGGGATCCTTTCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPMALL*GSFQLS
Trigger: GCTGAGCTGAAAGGATCCTCACAGGAGAGCCATGGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCACCAAAGAGGTGGATaGGCCGCAACAGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDHQRGG*AATATW
Trigger: CCACGTTGCTGTTGCGGCTCATCCACCTCTTTGGTG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGTTCACCCTCAGGCTTaGAGGGTGCTGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGVHPQA*RVLAHW
Trigger: CCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAAC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATGCACCAGGCTCTCCTaGTTCACGGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGCTRLS*FTVWFC
Trigger: GCAGAACCACACCGTGAATCAGGAGAGCCTGGTGCA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAGGGCAAGGGGACTCTaGAGGCAGGAAGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGRARGL*RQEDVR
Trigger: TCTGACGTCTTCCTGCCTTCAGAGTCCCCTTGCCCT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCGCGTCAGCACATCCTaGCAGCCAGCTTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGRVSTS*QPACRA
Trigger: GGCCCGACAAGCTGGCTGGCAGGATGTGCTGACGCG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCGTCGAGTGCTGCGCTaGCTGCTGCTTCAGTACAGA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARRVLR*LLLQYR
Trigger: TCTGTACTGAAGCAGCAGGCAGCGCAGCACTCGACG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCTCTGTAGCTGGACATaGAGGGACGTGAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGALCSWT*RDVKGS
Trigger: GGAGCCCTTCACGTCCCTGCATGTCCAGCTACAGAG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAAGTCACTCGTAGGCTaGCATCCCAGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAKSLVG*HPSGHH
Trigger: GTGGTGGCCACTGGGATGGCAGCCTACGAGTGACTT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCTGACGCTGCCCTCCTaGAGAGGGGTCCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGLTLPS*RGVPSP
Trigger: TGGACTGGGGACCCCTCTGCAGGAGGGCAGCGTCAG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCAGCAGAACACCCATaGCCCCTACGCAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAAEHP*PLRSSP
Trigger: TGGTGAACTGCGTAGGGGGCATGGGTGTTCTGCTGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAACCTGGTTCCGTAGCTaGGTGTGGGATGGGATAGGG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGTWFRS*VWDGIG
Trigger: CCCTATCCCATCCCACACCCAGCTACGGAACCAGGT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCACACCGATGGGTTTaGACAGGTCCCGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAPHRWV*TGPGRQ
Trigger: CTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCCTGGCGGTGTTTCTaGATGAAATCCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAWRCF*MKSSGL
Trigger: CAGCCCCGAGGATTTCATCCAGAAACACCGCCAGGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGGGCTTCATGGAAGATaGCTACAGCCCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGGLHGR*LQPPAH
Trigger: GTGAGCTGGGGGCTGTAGCCATCTTCCATGAAGCCC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGGTTGCAGGGCTTCATaGAAGATGGCTACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGGCRAS*KMATAP
Trigger: GGGGGCTGTAGCCATCTTCCATGAAGCCCTGCAACC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGTGGTCGCACAAGTGTaGCAGAGGCCCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGVVAQV*QRPPAG
Trigger: CCCAGCTGGGGGCCTCTGCCACACTTGTGCGACCAC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCGCTTGATGCAGTCTaGTGGTCGCACAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAALDAV*WSHKCG
Trigger: GCCACACTTGTGCGACCACCAGACTGCATCAAGCGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGTCACTCCACAGCTCCTaGTTACCGTGGCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGASLHSS*LPWPSA
Trigger: TGCTGAGGGCCACGGTAACCAGGAGCTGTGGAGTGA...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTCACTCCACAGCTCCTaGTTACCGTGGCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDSLHSS*LPWPSA
Trigger: TGCTGAGGGCCACGGTAACCAGGAGCTGTGGAGTGA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCTAGGACCAGCTCCTTaGAGGCCCGCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGLGPAP*RPADSG
Trigger: TCCAGAGTCGGCGGGCCTTCAAGGAGCTGGTCCTAG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGTAATAGAAGACATTaGGGGCCTCCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGASNRRH*GPPRPL
Trigger: CAGCGGCCGAGGAGGCCCTCAATGTCTTCTATTACT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGACCTGCTGGGGGTCCTaGGCAGGGCCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRTCWGS*AGPRPQ
Trigger: CTGGGGCCGTGGCCCTGCTCAGGACCCCCAGCAGGT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCTCCACAGCCATGTTaGGCAATTCCTGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPPQPC*AIPATA
Trigger: GGCTGTTGCAGGAATTGCTCAACATGGCTGTGGAGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCTCCACAGCCATGTTaGGCAATTCCTGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPPQPC*AIPATA
Trigger: GGCTGTTGCAGGAATTGCTCAACATGGCTGTGGAGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCACAGCGAAGTCACTaGGGGTCCAGAGGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAQRSH*GSRGES
Trigger: ACTTTCACCTCTGGACCCTCAGTGACTTCGCTGTGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGCAGCCAGGTATGAGTaGCCAGCAGCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGAARYE*PAAHWH
Trigger: GTGCCAGTGGGCTGCTGGGCACTCATACCTGGCTGC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCCGCAGGTGTCCAGTaGAAGGCAGGTCACTATATC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAAAGVQ*KAGHYI
Trigger: GATATAGTGACCTGCCTTGCACTGGACACCTGCGGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCACCAGCACATGACTaGGCTCCTTGGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPPAHD*APWSQT
Trigger: TGTCTGTGACCAAGGAGCGCAGTCATGTGCTGGTGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCACCAGCACATGACTaGGCTCCTTGGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPPAHD*APWSQT
Trigger: TGTCTGTGACCAAGGAGCGCAGTCATGTGCTGGTGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCACTCACAGCCATCTaGCCATTCGCCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGALTAI*PFAFPP
Trigger: AGGAGGAAAGGCGAATGGGCAGATGGCTGTGAGTGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGTAGCCCACCAGGCCTaGTTGCACACAGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGVAHQA*LHTGGA
Trigger: CGCACCACCTGTGTGCAAGCAGGCCTGGTGGGCTAC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCGTACTCCTTCCGTGTaGACACGGCCACCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGRTPSV*TRPPPG
Trigger: CCCTGGTGGTGGCCGTGTGCACACGGAAGGAGTACG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATGGTGGTTGTCGTTGTaGGGTGCCCAGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGWWLSL*GAQQNQ
Trigger: TTGGTTCTGCTGGGCACCGCACAACGACAACCACCA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCAGCGGGGAGGGTGTaGCAGGCTGGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPAGRV*QAGWPE
Trigger: CTCCGGCCAGCCAGCCTGGCACACCCTCCCCGCTGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGCGCCATTCGGCTGTaGCACAAAAAGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAGAIRL*HKKPGS
Trigger: ACTTCCAGGCTTTTTGTGCCACAGCCGAATGGCGCC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGGCGCCATTCGGCTGTaGCACAAAAAGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDGAIRL*HKKPGS
Trigger: ACTTCCAGGCTTTTTGTGCCACAGCCGAATGGCGCC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGTGCTTGTCGATGAAGTaGCGCCATTCGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGACLSMK*RHSAVA
Trigger: TGCCACAGCCGAATGGCGCCACTTCATCGACAAGCA...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGTGAGGTCTCCTCAGTaGGTGTCATGGGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDVRSPQ*VSWELH
Trigger: GTGAAGCTCCCATGACACCCACTGAGGAGACCTCAC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGTTAGGTAGCCTTGGGTaGGTGGCCTTAGGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGALGSLG*VALGAE
Trigger: TTCTGCGCCTAAGGCCACCCACCCAAGGCTACCTAA...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGTCCCGGAAGACAGCTaGATTGCTGAGGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDVPEDS*IAEVQD
Trigger: GTCTTGGACCTCAGCAATCCAGCTGTCTTCCGGGAC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGATTCACCACACCGATaGGTTTGGACAGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGADSPHR*VWTGPG
Trigger: TCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGATTCACCACACCGATaGGTTTGGACAGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGDSPHR*VWTGPG
Trigger: TCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCAAGCTGGGCATGCTTaGGATTCACCACACCGATGG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDQAGHA*DSPHRW
Trigger: CCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTCCCCAGAGGACACCTaGGAGATTCGCCGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGSPEDT*EIRREE
Trigger: CTCCTCGCGGCGAATCTCCCAGGTGTCCTCTGGGGA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTGCTCTCAGAGCCAGTaGCACCTGCTGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGCSQSQ*HLLGVL
Trigger: CAGGACCCCCAGCAGGTGCCACTGGCTCTGAGAGCA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGCGCAGCTCAGCTGTaGGCAGTGCTGGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGAAQL*AVLVAT
Trigger: AGTGGCTACCAGCACTGCCCACAGCTGAGCTGCGCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCCGGCCTCGGCCTCCTaGGGCTGCACAGCCACTCGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDPASAS*GCTATR
Trigger: GCGAGTGGCTGTGCAGCCCCAGGAGGCCGAGGCCGG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCGGCCTCGGCCTCCTaGGGCTGCACAGCCACTCGC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPASAS*GCTATR
Trigger: GCGAGTGGCTGTGCAGCCCCAGGAGGCCGAGGCCGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAAGGGGTCTTGCACTaGAGAACCCTGAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGQGVLH*RTLKQG
Trigger: ACCCTGCTTCAGGGTTCTCCAGTGCAAGACCCCTTG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCAAGGGGTCTTGCACTaGAGAACCCTGAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDQGVLH*RTLKQG
Trigger: ACCCTGCTTCAGGGTTCTCCAGTGCAAGACCCCTTG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCTAGCAACAAGACCCTaGAGACCACAGTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGALATRP*RPQSCS
Trigger: GCTGCACGACTGTGGTCTCCAGGGTCTTGTTGCTAG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTCTTCAGGGGTTTGCTaGGGGTTGCTCGTGTTCGAG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDSSGVC*GLLVFE
Trigger: CTCGAACACGAGCAACCCCCAGCAAACCCCTGAAGA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGTCTTCAGGGGTTTGCTaGGGGTTGCTCGTGTTCGAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGASSGVC*GLLVFE
Trigger: CTCGAACACGAGCAACCCCCAGCAAACCCCTGAAGA...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGTTGGCCAGGCCTCCTaGGGGAGCCTCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGVGQAS*GSLLDV
Trigger: GACATCAAGGAGGCTCCCCCAGGAGGCCTGGCCAAC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAGCTCCTGGTTACCGTaGCCCTCAGCACACAGGAAA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGSSWLP*PSAHRK
Trigger: TTTCCTGTGTGCTGAGGGCCACGGTAACCAGGAGCT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAGCTCCTGGTTACCGTaGCCCTCAGCACACAGGAAA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDSSWLP*PSAHRK
Trigger: TTTCCTGTGTGCTGAGGGCCACGGTAACCAGGAGCT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATGCCCAGCAGCCCACTaGCACTTACAGTCACCAACA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGCPAAH*HLQSPT
Trigger: TGTTGGTGACTGTAAGTGCCAGTGGGCTGCTGGGCA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGGCATTCCAGAAGCCTaGCATGAGGTCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGGIPEA*HEVMAL
Trigger: AAGAGCCATGACCTCATGTCAGGCTTCTGGAATGCC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGCATTCCAGAAGCCTaGCATGAGGTCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAGIPEA*HEVMAL
Trigger: AAGAGCCATGACCTCATGTCAGGCTTCTGGAATGCC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGCTCCTTCAGCAGCTaGCAAGGAGTCTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGSFSS*QGVCPK
Trigger: CTTCGGGCAGACTCCTTGTCAGCTGCTGAAGGAGCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTGTCAAGTTCAGTGCTaGTGGCCACACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDCQVQC*WPHSSL
Trigger: CAGTGAGCTGTGTGGCCATCAGCACTGAACTTGACA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGATATGTAGAGAGCACTaGGCGGTGCCCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAICREH*AVPSRT
Trigger: TGTTCTGCTGGGCACCGCTCAGTGCTCTCTACATAT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTAGGCCCACCAGCACATaGCTGCGCTCCTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGRPTST*LRSLVT
Trigger: TGTGACCAAGGAGCGCAGTCATGTGCTGGTGGGCCT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCACGGGCGGCACCATaGTGCCAGCCATGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRARAAP*CQPCWA
Trigger: CGCCCAGCATGGCTGGCATCATGGTGCCGCCCGTGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGGAGAAAGGCTCACTaGGGGAGGGAAAGCGAAAAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARRKAH*GRESEK
Trigger: CTTTTCGCTTTCCCTCCCTCAGTGAGCCTTTCTCCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCATCGAGGAGGAACTaGACTCCGTACTTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGASRRN*TPYFFR
Trigger: TCGGAAGAAGTACGGAGTTCAGTTCCTCCTCGATGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAGGTATCATCCCCACTaGTGTTGGGTTCTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDRYHPH*CWVLAG
Trigger: GCCTGCTAGAACCCAACATCAGTGGGGATGATACCT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCATCAGGGACTCCAGTaGAGCCAGGTCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGHQGLQ*SQVLFP
Trigger: GGGGAAGAGGACCTGGCTGCACTGGAGTCCCTGATG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCTTGTCGATTGTGCCTaGTGGGTCCTCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGALVDCA*WVLKAL
Trigger: GAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGGTCGATCCATTCGTaGAGGTGGGTGGACACATAC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARSIHS*RWVDTY
Trigger: GTATGTGTCCACCCACCTGCACGAATGGATCGACCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCTGATTCAACAGCCTaGCACGGGGTAGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAADSTA*HGVVKS
Trigger: TGACTTCACTACCCCGTGGCAGGCTGTTGAATCAGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGCTGATTCAACAGCCTaGCACGGGGTAGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDADSTA*HGVVKS
Trigger: TGACTTCACTACCCCGTGGCAGGCTGTTGAATCAGC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAGAACAAAGTCTTCTaGCACAGTCAGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGQNKVF*HSQGCG
Trigger: CCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGAGAGCACTGAGCGGTaGCCAGCAGAACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGESTER*PAEQSL
Trigger: AAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGCACTGGCTGCTCGTTaGGGATTGGTGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGALAAR*GLVEVG
Trigger: ACCCACCTCCACCAATCCGCAACGAGCAGCCAGTGC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCGTGCAGGACCCCGGTaGCGGGCCATGCCCGACAGT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRAGPR*RAMPDS
Trigger: ACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCGTGCAGGACCCCGGTaGCGGGCCATGCCCGACAGT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRAGPR*RAMPDS
Trigger: ACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGTTGTCGTTGTGCGGTaGCCAGCAGAACCAATACAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAVVVVR*PAEPIQ
Trigger: CTGTATTGGTTCTGCTGGGCACCGCACAACGACAAC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTGGGTTCTAGCAGGCTaGCATCTTCCAGCACATTGG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDWVLAG*HLPAHW
Trigger: CCAATGTGCTGGAAGATGGCAGCCTGCTAGAACCCA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGGGTTTGCTGGGGGTTaGTCGTGTTCGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDGFAGG*SCSRYH
Trigger: ATGATACCTCGAACACGAGCAACCCCCAGCAAACCC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCACACAGGAAATCCTaGAGTAAACGGAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAAHRKS*SKRSSH
Trigger: GTGGCTGCTCCGTTTACTGCAGGATTTCCTGTGTGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCACACAGGAAATCCTaGAGTAAACGGAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAHRKS*SKRSSH
Trigger: GTGGCTGCTCCGTTTACTGCAGGATTTCCTGTGTGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGACACTGAGGTCAGCCTaGAGGGACAGCTGTACAACA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGATLRSA*RDSCTT
Trigger: TGTTGTACAGCTGTCCCTCCAGGCTGACCTCAGTGT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACACACTGAGGTCAGCCTaGAGGGACAGCTGTACAACA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDTLRSA*RDSCTT
Trigger: TGTTGTACAGCTGTCCCTCCAGGCTGACCTCAGTGT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGTCCTCAAAGAAGGTaGGGCTTCCATTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGASPQRR*GFHWWV
Trigger: CACCCACCAATGGAAGCCCCACCTTCTTTGAGGACT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCTGAGGTCCAAGACTaGGGACACATAGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAAEVQD*GHIVLQ
Trigger: TTGCAGGACTATGTGTCCCCAGTCTTGGACCTCAGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATTCTCCCTCACAAGCTaGGCATGCTTGGGATTCACC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGFSLTS*ACLGFT
Trigger: GGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCTCGTTGGTCAACTaGAGGCAGCCCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDFSLVN*RQPRSK
Trigger: CTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCATGACTGCGCTCCTTaGTCACAGACACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDHDCAP*SQTHCG
Trigger: TCCACAGTGTGTCTGTGACCAAGGAGCGCAGTCATG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGTGGTCAAGCACCTTCTaGACATCGGGCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAWSSTF*TSGSVS
Trigger: ACTGACTGAGCCCGATGTCCAGAAGGTGCTTGACCA...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGTGGGTGCATGCTGTaGTCACCCTCCACAGCCATG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGGCML*SPSTAM
Trigger: CATGGCTGTGGAGGGTGACCACAGCATGCACCCACC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTACAGTTGTTTCCGCTaGAGGGGCCGGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGYSCFR*RGRLGA
Trigger: AGCTCCCAGCCGGCCCCTCCAGCGGAAACAACTGTA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTACGCGGGAAGCCCTGTaGTGGTTGTCGTTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGTREAL*WLSLCG
Trigger: ACCGCACAACGACAACCACCACAGGGCTTCCCGCGT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCACCCTCCAGAGATGTaGGGCTTCCCCACCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGHPPEM*GFPTEC
Trigger: ACACTCGGTGGGGAAGCCCCACATCTCTGGAGGGTG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCATCTTCCAGCACATTaGAGAGACTGGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAHLPAH*RDWSCG
Trigger: GCCACAGCTCCAGTCTCTCCAATGTGCTGGAAGATG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGGATACGGTCCCGCTaGTGCCGCTGCCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDWIRSR*CRCPLL
Trigger: GAGCAGCGGGCAGCGGCATCAGCGGGACCGTATCCA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGGATACGGTCCCGCTaGTGCCGCTGCCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVWIRSR*CRCPLL
Trigger: GAGCAGCGGGCAGCGGCATCAGCGGGACCGTATCCA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGGATACGGTCCCGCTaGTGCCGCTGCCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRWIRSR*CRCPLL
Trigger: GAGCAGCGGGCAGCGGCATCAGCGGGACCGTATCCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCCACAGCCACCACCGTaGCGAGCTGGCACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDPQPPP*RAGTQP
Trigger: CGGCTGAGTGCCAGCTCGTCACGGTGGTGGCTGTGG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCACAGCCACCACCGTaGCGAGCTGGCACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPQPPP*RAGTQP
Trigger: CGGCTGAGTGCCAGCTCGTCACGGTGGTGGCTGTGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCTTGTGTGGGAAGTTaGGGAAGTAGTTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGPCVGS*GSSWTG
Trigger: ACCAGTCCAACTACTTCCTCAACTTCCCACACAAGG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCTTGTGTGGGAAGTTaGGGAAGTAGTTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAPCVGS*GSSWTG
Trigger: ACCAGTCCAACTACTTCCTCAACTTCCCACACAAGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGCCTGGCAAGGGGATaGCGCAGAGGACGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSLARG*RRGRGH
Trigger: GTGGCCGCGTCCTCTGCGTCATCCCCTTGCCAGGCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGCCTGGCAAGGGGATaGCGCAGAGGACGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSLARG*RRGRGH
Trigger: GTGGCCGCGTCCTCTGCGTCATCCCCTTGCCAGGCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCTGGAAGATGCTTGGTaGGTTAGTGTCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGLEDAW*VSVQPG
Trigger: GCCCGGCTGGACACTAACTCACCAAGCATCTTCCAG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCACCAAAGAGGTGGATaGGCCGCAACAGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGHQRGG*AATATW
Trigger: CCACGTTGCTGTTGCGGCTCATCCACCTCTTTGGTG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCATGGCGAGCCTTCTaGGATTCATTTCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGAWRAF*DSFPLD
Trigger: GTCAAGTGGAAATGAATCTCAGAAGGCTCGCCATGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCTGAGCCACTGCTGGTaGAGAAGCTGTACAGTTGTT +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGALSHCW*RSCTVV
Trigger: AACAACTGTACAGCTTCTTCACCAGCAGTGGCTCAG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTGCACCAGGCTCTCCTaGTTCACGGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGCTRLS*FTVWFC
Trigger: GCAGAACCACACCGTGAATCAGGAGAGCCTGGTGCA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGACATGTACTGGATGTaGCCCAGGCGCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGDMYWM*PRRTAK
Trigger: CTTCGCTGTGCGCCTGGGTCACATCCAGTACATGTC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTCTCCAGCCGTGCCTaGCAGGCTGCTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLSSRA*QAAATE
Trigger: CTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTCTCCAGCCGTGCCTaGCAGGCTGCTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLSSRA*QAAATE
Trigger: CTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCCACAACGATCAATTTaGCATCTTCCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDPQRSI*HLPGPP
Trigger: TGGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCTCCTGGCCACCGCTaGACGGGCGGCACCATGATG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAPGHR*TGGTMM
Trigger: CATCATGGTGCCGCCCGTGCAGCGGTGGCCAGGAGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCTCCTGGCCACCGCTaGACGGGCGGCACCATGATG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAPGHR*TGGTMM
Trigger: CATCATGGTGCCGCCCGTGCAGCGGTGGCCAGGAGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCGGCGCCCGGGCACATaGACAATGGCCACGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRRPGT*TMATQC
Trigger: GCACTGCGTGGCCATTGTGCATGTGCCCGGGCGCCG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCGGCGCCCGGGCACATaGACAATGGCCACGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRRPGT*TMATQC
Trigger: GCACTGCGTGGCCATTGTGCATGTGCCCGGGCGCCG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTAGGGCAGATGGTTaGAGGGCTTCATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGLRADG*RASWKM
Trigger: CATCTTCCATGAAGCCCTGCAACCATCTGCCCTAAG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCTTAGGGCAGATGGTTaGAGGGCTTCATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDLRADG*RASWKM
Trigger: CATCTTCCATGAAGCCCTGCAACCATCTGCCCTAAG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTCGGCCTCCTGGGGCTaGACAGCCACTCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSASWG*TATRSS
Trigger: GCTGGAGCGAGTGGCTGTGCAGCCCCAGGAGGCCGA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCGGCCTCCTGGGGCTaGACAGCCACTCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSASWG*TATRSS
Trigger: GCTGGAGCGAGTGGCTGTGCAGCCCCAGGAGGCCGA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTCGGCCTCCTGGGGCTaGACAGCCACTCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSASWG*TATRSS
Trigger: GCTGGAGCGAGTGGCTGTGCAGCCCCAGGAGGCCGA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGGTAACCGCTCATTCTaGTGCAGTCTTCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDGNRSF*CSLRKI
Trigger: GATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCGGCGGGTCGGCACTaGGGTCTGCAGCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPAGRH*GLQQCV
Trigger: CACACACTGCTGCAGACCGCAGTGCCGACCCGCCGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGGACCTCACGCAGCTaGGCCAAGGGGCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVWTSRS*AKGRRK
Trigger: CTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGGACCTCACGCAGCTaGGCCAAGGGGCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRWTSRS*AKGRRK
Trigger: CTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGGACCTCACGCAGCTaGGCCAAGGGGCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDWTSRS*AKGRRK
Trigger: CTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGGACCTCACGCAGCTaGGCCAAGGGGCGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSWTSRS*AKGRRK
Trigger: CTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGTCGATTGTGCCTGCTaGGTCCTCAAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDVDCAC*VLKALI
Trigger: TATGAGAGCTTTGAGGACCCAGCAGGCACAATCGAC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATCTGACTCCAGAGCCTaGCGGTGTTTCTGGATGAAA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGSDSRA*RCFWMK
Trigger: TTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACATTCGTGCAGGTGGGTaGACACATACTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDIRAGG*THTLTP
Trigger: TGGAGTCAGAGTATGTGTCCACCCACCTGCACGAAT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGGCCTCCTCGGCCGCTaGACCCCGCTGCTTATAGCC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRGLLGR*TPLLIA
Trigger: GGCTATAAGCAGCGGGGTCCAGCGGCCGAGGAGGCC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGCCTCCTCGGCCGCTaGACCCCGCTGCTTATAGCC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGLLGR*TPLLIA
Trigger: GGCTATAAGCAGCGGGGTCCAGCGGCCGAGGAGGCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAATGCTGCCACAAACTaGCCTCGACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGNAATN*PRRTVC
Trigger: ACACACTGTACGTCGAGGCCAGTTTGTGGCAGCATT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCATCAGCACCAGCACTaGCTGCTCGTTGCGGATTGG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGHQHQH*LLVADW
Trigger: CCAATCCGCAACGAGCAGCCAGTGCTGGTGCTGATG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCCAGCCCAGGCCTGTaGAGGCTGGGACTGACTGGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPSPGL*RLGLTG
Trigger: CCCAGTCAGTCCCAGCCTCCACAGGCCTGGGCTGGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCGGCCTTGGGCAGTTaGGAAGGGCCGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAALGS*EGPWPI
Trigger: GATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCGGCCTTGGGCAGTTaGGAAGGGCCGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAALGS*EGPWPI
Trigger: GATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCGGCCTTGGGCAGTTaGGAAGGGCCGTGGCCCATC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAALGS*EGPWPI
Trigger: GATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCGAACGCCGCAGGTTaGAACGCCGCAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPNAAG*NAAGGP
Trigger: AGGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCGAACGCCGCAGGTTaGAACGCCGCAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPNAAG*NAAGGP
Trigger: AGGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCCGAACGCCGCAGGTTaGAACGCCGCAGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDPNAAG*NAAGGP
Trigger: AGGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGGGCTCCACGCGGATaGGGTAGTGCATCACGCCCG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRAPRG*GSASRP
Trigger: CGGGCGTGATGCACTACCTCATCCGCGTGGAGCCCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCTCCACGCGGATaGGGTAGTGCATCACGCCCG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRAPRG*GSASRP
Trigger: CGGGCGTGATGCACTACCTCATCCGCGTGGAGCCCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGGGCTCCACGCGGATaGGGTAGTGCATCACGCCCG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRAPRG*GSASRP
Trigger: CGGGCGTGATGCACTACCTCATCCGCGTGGAGCCCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAACCTCCCATTCACTaGATACAGGTGCAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGQPPIH*IQVQGV
Trigger: TACTCCTTGCACCTGTATTCAGTGAATGGGAGGTTG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATCCAGAGGTGAAAGTTaGAGAGCAGGTGCTGATAGA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGSRGES*RAGADR
Trigger: TCTATCAGCACCTGCTCTTCAACTTTCACCTCTGGA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTCCAGAGGTGAAAGTTaGAGAGCAGGTGCTGATAGA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDSRGES*RAGADR
Trigger: TCTATCAGCACCTGCTCTTCAACTTTCACCTCTGGA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTGCACTGGAGAACCCTaGAGCAGGGTTAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGCTGEP*SRVSNS
Trigger: GCTGTTGCTAACCCTGCTTCAGGGTTCTCCAGTGCA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCTCCACGCGAGCCCTaGGCTGGGCAGGTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPPREP*AGQVLG
Trigger: TCCTAGAACCTGCCCAGCGCAGGGCTCGCGTGGAGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCTCCACGCGAGCCCTaGGCTGGGCAGGTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPPREP*AGQVLG
Trigger: TCCTAGAACCTGCCCAGCGCAGGGCTCGCGTGGAGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTCTCACAAGCTGGGCATaGTTGGGATTCACCACACCG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGLTSWA*LGFTTP
Trigger: CGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAG...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCGTGCCTGCCAGGCTaGTGCCACCGAGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPCLPG*CHRVEL
Trigger: CAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCGTGCCTGCCAGGCTaGTGCCACCGAGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPCLPG*CHRVEL
Trigger: CAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAAACGCTCTGCATCCTaGAGGTTCTCTTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAKRSAS*RFSWKK
Trigger: CTTCTTCCAAGAGAACCTGCAGGATGCAGAGCGTTT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTGACGCTGCCCTCCTaGAGAGGGGTCCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLTLPS*RGVPSP
Trigger: TGGACTGGGGACCCCTCTGCAGGAGGGCAGCGTCAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTGACGCTGCCCTCCTaGAGAGGGGTCCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLTLPS*RGVPSP
Trigger: TGGACTGGGGACCCCTCTGCAGGAGGGCAGCGTCAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAACCGCTCATTCTGCTaGAGTCTTCGCAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDNRSFC*SLRKIL
Trigger: CAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGCGCCATTCGGCTGTaGCACAAAAAGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGAIRL*HKKPGS
Trigger: ACTTCCAGGCTTTTTGTGCCACAGCCGAATGGCGCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCTGACATGAGGTCATaGCTCTTAGCATATGTGTCC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAPDMRS*LLAYVS
Trigger: GGACACATATGCTAAGAGCCATGACCTCATGTCAGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGTGAGGTCTCCTCAGTaGGTGTCATGGGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGVRSPQ*VSWELH
Trigger: GTGAAGCTCCCATGACACCCACTGAGGAGACCTCAC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGGGGCCTGGGAGCCTaGCAAGGGGATGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDWGLGA*QGDDAE
Trigger: CTCTGCGTCATCCCCTTGCCAGGCTCCCAGGCCCCA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGGGGCCTGGGAGCCTaGCAAGGGGATGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRWGLGA*QGDDAE
Trigger: CTCTGCGTCATCCCCTTGCCAGGCTCCCAGGCCCCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGGTAGAGCTGGGGCCTaGGAGCCTGGCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDGRAGA*EPGKGM
Trigger: CATCCCCTTGCCAGGCTCCCAGGCCCCAGCTCTACC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGTAGAGCTGGGGCCTaGGAGCCTGGCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGRAGA*EPGKGM
Trigger: CATCCCCTTGCCAGGCTCCCAGGCCCCAGCTCTACC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGGTAGAGCTGGGGCCTaGGAGCCTGGCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSGRAGA*EPGKGM
Trigger: CATCCCCTTGCCAGGCTCCCAGGCCCCAGCTCTACC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGGTCAAAGCCATTCTaGTTCTCCAGGAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARSKPF*FSRKSG
Trigger: TCCTGACTTCCTGGAGAACCAGAATGGCTTTGACCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCCGGGCGAGGCGATTaGCTGCTTCCTCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAGRGD*LLPQPR
Trigger: TCTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCCGGGCGAGGCGATTaGCTGCTTCCTCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAGRGD*LLPQPR
Trigger: TCTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCCGGGCGAGGCGATTaGCTGCTTCCTCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAGRGD*LLPQPR
Trigger: TCTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCTAACAGCTGCTCCTaGCAGCGGGCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSANSCS*QRAPRA
Trigger: AGCCCTGGGAGCCCGCTGCCAGGAGCAGCTGTTAGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGAGGCTGGGACTGACTaGGAGCGGGTGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVEAGTD*ERVREG
Trigger: CCCTTCCCTCACCCGCTCCCAGTCAGTCCCAGCCTC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGAGGCTGGGACTGACTaGGAGCGGGTGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSREAGTD*ERVREG
Trigger: CCCTTCCCTCACCCGCTCCCAGTCAGTCCCAGCCTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGAGGCTGGGACTGACTaGGAGCGGGTGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDEAGTD*ERVREG
Trigger: CCCTTCCCTCACCCGCTCCCAGTCAGTCCCAGCCTC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCCCACCGAGTGTCCTaGGTGCCTGCGAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPHRVS*VPARVE
Trigger: CTCTACCCTCGCAGGCACCCAGGACACTCGGTGGGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCCCACCGAGTGTCCTaGGTGCCTGCGAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPHRVS*VPARVE
Trigger: CTCTACCCTCGCAGGCACCCAGGACACTCGGTGGGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCGGCCATCCAGCCCATaGCCAGGGGACAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRPSSP*PGDRSR
Trigger: TCTGGACCTGTCCCCTGGCCATGGGCTGGATGGCCG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGAGCTGTGGCGGCCTTaGGCAGTTGGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVELWRP*AVGKGR
Trigger: ACGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGAGCTGTGGCGGCCTTaGGCAGTTGGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRELWRP*AVGKGR
Trigger: ACGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGTGGTCGCACAAGTGTaGCAGAGGCCCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVVVAQV*QRPPAG
Trigger: CCCAGCTGGGGGCCTCTGCCACACTTGTGCGACCAC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGTGGTCGCACAAGTGTaGCAGAGGCCCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSVVAQV*QRPPAG
Trigger: CCCAGCTGGGGGCCTCTGCCACACTTGTGCGACCAC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCTGCTGGGAAAGGTTaGCCAGGCCTCCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPAGKG*PGLLGE
Trigger: CTCCCCCAGGAGGCCTGGCCAACCTTTCCCAGCAGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCTGCTGGGAAAGGTTaGCCAGGCCTCCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPAGKG*PGLLGE
Trigger: CTCCCCCAGGAGGCCTGGCCAACCTTTCCCAGCAGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGCATTCCAGAAGCCTaGCATGAGGTCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGIPEA*HEVMAL
Trigger: AAGAGCCATGACCTCATGTCAGGCTTCTGGAATGCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTAGGACCAGCTCCTTaGAGGCCCGCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLGPAP*RPADSG
Trigger: TCCAGAGTCGGCGGGCCTTCAAGGAGCTGGTCCTAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTAGGACCAGCTCCTTaGAGGCCCGCCGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLGPAP*RPADSG
Trigger: TCCAGAGTCGGCGGGCCTTCAAGGAGCTGGTCCTAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACACTCACGCCACTGTCTaGGACCCAGGGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDTHATV*DPGPTQ
Trigger: CTGAGTGGGCCCTGGGTCTCAGACAGTGGCGTGAGT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCACTCACGCCACTGTCTaGGACCCAGGGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVTHATV*DPGPTQ
Trigger: CTGAGTGGGCCCTGGGTCTCAGACAGTGGCGTGAGT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCAGCCATGCTGGGCGTaGGGTCAAAGTAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRQPCWA*GQSSAG
Trigger: CCCTGCGCTACTTTGACCTCACGCCCAGCATGGCTG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCAGCCATGCTGGGCGTaGGGTCAAAGTAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVQPCWA*GQSSAG
Trigger: CCCTGCGCTACTTTGACCTCACGCCCAGCATGGCTG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTGACTGGGAGCGGGTaGGGGAAGGGTGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLTGSG*GKGECE
Trigger: CTCACACTCACCCTTCCCTCACCCGCTCCCAGTCAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTGACTGGGAGCGGGTaGGGGAAGGGTGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLTGSG*GKGECE
Trigger: CTCACACTCACCCTTCCCTCACCCGCTCCCAGTCAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTGGGGGAGCCTCCTTaGTGTCGGTCAGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLGEPP*CRSGLT
Trigger: AGTCAGCCCTGACCGACATCAAGGAGGCTCCCCCAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTGGGGGAGCCTCCTTaGTGTCGGTCAGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLGEPP*CRSGLT
Trigger: AGTCAGCCCTGACCGACATCAAGGAGGCTCCCCCAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTGGGGGAGCCTCCTTaGTGTCGGTCAGGGCTGACT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLGEPP*CRSGLT
Trigger: AGTCAGCCCTGACCGACATCAAGGAGGCTCCCCCAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGCAGTGCCGTCGAGTaGTGCGCTGCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSSAVE*CAACCF
Trigger: GAAGCAGCAGGCAGCGCAGCACTCGACGGCACTGCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGCAGTGCCGTCGAGTaGTGCGCTGCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSSAVE*CAACCF
Trigger: GAAGCAGCAGGCAGCGCAGCACTCGACGGCACTGCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCCAGTGGGGAGCGGCTaGTTAGGTAGCCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDPVGSG*LGSLGW
Trigger: CCACCCAAGGCTACCTAAGCAGCCGCTCCCCACTGG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCAGTGGGGAGCGGCTaGTTAGGTAGCCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPVGSG*LGSLGW
Trigger: CCACCCAAGGCTACCTAAGCAGCCGCTCCCCACTGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCAGCCAGGTATGAGTaGCCAGCAGCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAARYE*PAAHWH
Trigger: GTGCCAGTGGGCTGCTGGGCACTCATACCTGGCTGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCAGCCAGGTATGAGTaGCCAGCAGCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAARYE*PAAHWH
Trigger: GTGCCAGTGGGCTGCTGGGCACTCATACCTGGCTGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGCTGATTCAACAGCCTaGCACGGGGTAGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGADSTA*HGVVKS
Trigger: TGACTTCACTACCCCGTGGCAGGCTGTTGAATCAGC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTGTCCGTATAAGACCTaGACAGGCTTTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGCPYKT*TGFGAS
Trigger: GCTGGCACCAAAGCCTGTGCAGGTCTTATACGGACA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGGCACTTCCGCACCTaGCTCCTCTGGCCTTCGAGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRHFRT*LLWPSR
Trigger: CCTCGAAGGCCAGAGGAGGCAGGTGCGGAAGTGCCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGTAGCCCACCAGGCCTaGTTGCACACAGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRVAHQA*LHTGGA
Trigger: CGCACCACCTGTGTGCAAGCAGGCCTGGTGGGCTAC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCGTACTCCTTCCGTGTaGACACGGCCACCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRTPSV*TRPPPG
Trigger: CCCTGGTGGTGGCCGTGTGCACACGGAAGGAGTACG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCGTACTCCTTCCGTGTaGACACGGCCACCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRTPSV*TRPPPG
Trigger: CCCTGGTGGTGGCCGTGTGCACACGGAAGGAGTACG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGTTGTCGTTGTGCGGTaGCCAGCAGAACCAATACAG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGVVVVR*PAEPIQ
Trigger: CTGTATTGGTTCTGCTGGGCACCGCACAACGACAAC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCATCAGCAGCCGCCTaGTCCATCAGCAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPSAAA*SISSWA
Trigger: TGCCCAGCTGCTGATGGAGCAGGCGGCTGCTGATGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCAACAGCTCCAGGGTaGCCACCACCTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRATAPG*PPPGHR
Trigger: ACGATGGCCAGGTGGTGGGCACCCTGGAGCTGTTGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGGTTTGCTGGGGGTTaGTCGTGTTCGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGFAGG*SCSRYH
Trigger: ATGATACCTCGAACACGAGCAACCCCCAGCAAACCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGCACACAGGAAATCCTaGAGTAAACGGAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGAHRKS*SKRSSH
Trigger: GTGGCTGCTCCGTTTACTGCAGGATTTCCTGTGTGC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTTGAAACGCCGCAGGTaGACCTCACGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLKRRR*TSRSWA
Trigger: GGCCCAGCTGCGTGAGGTCCACCTGCGGCGTTTCAA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTTGAAACGCCGCAGGTaGACCTCACGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLKRRR*TSRSWA
Trigger: GGCCCAGCTGCGTGAGGTCCACCTGCGGCGTTTCAA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCTGCTGCCACCGAGTaGAACTGCCGGTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAAATE*NCRSEQ
Trigger: CTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCTGCTGCCACCGAGTaGAACTGCCGGTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAAATE*NCRSEQ
Trigger: CTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCTGCTGCCACCGAGTaGAACTGCCGGTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAAATE*NCRSEQ
Trigger: CTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGAGCCGGGGTGGGTGTaGCTCCTTCAGCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVEPGWV*LLQQLT
Trigger: TGTCAGCTGCTGAAGGAGCCACACCCACCCCGGCTC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGAGCCGGGGTGGGTGTaGCTCCTTCAGCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSEPGWV*LLQQLT
Trigger: TGTCAGCTGCTGAAGGAGCCACACCCACCCCGGCTC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCCACACCATGCACGTaGTATCCCGGGAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVATPCT*YPGSRR
Trigger: TCTCCGGCTCCCGGGATACCACGTGCATGGTGTGGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCCACACCATGCACGTaGTATCCCGGGAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRATPCT*YPGSRR
Trigger: TCTCCGGCTCCCGGGATACCACGTGCATGGTGTGGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCACAGTCAGGGCTGTaGGCTGCTCCGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPQSGL*AAPSGS
Trigger: TGACCCTGACGGAGCAGCCCACAGCCCTGACTGTGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCACAGTCAGGGCTGTaGGCTGCTCCGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPQSGL*AAPSGS
Trigger: TGACCCTGACGGAGCAGCCCACAGCCCTGACTGTGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCACAGTCAGGGCTGTaGGCTGCTCCGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPQSGL*AAPSGS
Trigger: TGACCCTGACGGAGCAGCCCACAGCCCTGACTGTGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTCCCCAGAGGACACCTaGGAGATTCGCCGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSPEDT*EIRREE
Trigger: CTCCTCGCGGCGAATCTCCCAGGTGTCCTCTGGGGA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTCCCCAGAGGACACCTaGGAGATTCGCCGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSPEDT*EIRREE
Trigger: CTCCTCGCGGCGAATCTCCCAGGTGTCCTCTGGGGA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTCCTGCAGGTTCTCTTaGAAGAAGGCTCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDSCRFS*KKAPNS
Trigger: TGAATTTGGAGCCTTCTTCCAAGAGAACCTGCAGGA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGCTCTCAGAGCCAGTaGCACCTGCTGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRCSQSQ*HLLGVL
Trigger: CAGGACCCCCAGCAGGTGCCACTGGCTCTGAGAGCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTGGTCAAGCACCTTCTaGACATCGGGCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGWSSTF*TSGSVS
Trigger: ACTGACTGAGCCCGATGTCCAGAAGGTGCTTGACCA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGGCGCAGCTCAGCTGTaGGCAGTGCTGGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSGAAQL*AVLVAT
Trigger: AGTGGCTACCAGCACTGCCCACAGCTGAGCTGCGCC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTGCTTGCACACAGGTaGTGCGACTGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLLAHR*CDWQGS
Trigger: GCTGCCCTGCCAGTCGCACCACCTGTGTGCAAGCAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTGCTTGCACACAGGTaGTGCGACTGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLLAHR*CDWQGS
Trigger: GCTGCCCTGCCAGTCGCACCACCTGTGTGCAAGCAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCGGGCACATGCACAATaGCCACGCAGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRAHAQ*PRSARQ
Trigger: CTGCCTGGCACTGCGTGGCCATTGTGCATGTGCCCG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCGGGAAGCCCTGTGGTaGTTGTCGTTGTGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVREALW*LSLCGA
Trigger: GGCACCGCACAACGACAACCACCACAGGGCTTCCCG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCGGGAAGCCCTGTGGTaGTTGTCGTTGTGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSREALW*LSLCGA
Trigger: GGCACCGCACAACGACAACCACCACAGGGCTTCCCG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGGGTGCCCACCACCTaGCCATCGTCACCGGTAGCT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRVPTT*PSSPVA
Trigger: AGCTACCGGTGACGATGGCCAGGTGGTGGGCACCCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGAGAGACTGGAGCTGTaGCGGCCTTGGGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRERLEL*RPWAVG
Trigger: CCCAACTGCCCAAGGCCGCCACAGCTCCAGTCTCTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGAGAGACTGGAGCTGTaGCGGCCTTGGGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSERLEL*RPWAVG
Trigger: CCCAACTGCCCAAGGCCGCCACAGCTCCAGTCTCTC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCAGAGGCCCCCAGCTaGGTAAGCACGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAEAPS*VSTEKT
Trigger: GGTCTTCTCCGTGCTTACCCAGCTGGGGGCCTCTGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCAGAGGCCCCCAGCTaGGTAAGCACGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAEAPS*VSTEKT
Trigger: GGTCTTCTCCGTGCTTACCCAGCTGGGGGCCTCTGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGTTGGCCAGGCCTCCTaGGGGAGCCTCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDVGQAS*GSLLDV
Trigger: GACATCAAGGAGGCTCCCCCAGGAGGCCTGGCCAAC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCGCTGCCTCCAGCTTaGAGAGCACGTAGCACGCCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSALPPA*RARSTP
Trigger: AGGCGTGCTACGTGCTCTCCAAGCTGGAGGCAGCGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCGCTGCCTCCAGCTTaGAGAGCACGTAGCACGCCT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVALPPA*RARSTP
Trigger: AGGCGTGCTACGTGCTCTCCAAGCTGGAGGCAGCGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp AGGCACGAAGCATCTCCAGTGGGGAGCGGCTGCTTAGGTAGCCTTGGGTGGGTGTGTCTAGGCGGACACTaGGGTCAGCCTGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: RHEASPVGSGCLGSLGWVCLGGH*GQPGGT
Trigger: TGTCCCTCCAGGCTGACCTCAGTGTCCGCCTAGACA...CACCCACCCAAGGCTACCTAAGCAGCCGCTCCCCACTGGAGATGCTTCGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123996.2
CDS-3UTR TCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGTCCATTTCAAACTTTaGCATAGTTGGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAVHFKL*HSWLNL
Trigger: CAGGTTCAGCCAACTATGTCAAAGTTTGAAATGGAC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCTGCCCGCTGCTCATaGGTGTGTCGTAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAARCS*VCRSRH
Trigger: ATGCCTGCTACGACACACTCATGAGCAGCGGGCAGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCTGCCCGCTGCTCATaGGTGTGTCGTAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAARCS*VCRSRH
Trigger: ATGCCTGCTACGACACACTCATGAGCAGCGGGCAGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCTGCCCGCTGCTCATaGGTGTGTCGTAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAARCS*VCRSRH
Trigger: ATGCCTGCTACGACACACTCATGAGCAGCGGGCAGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCACTGCCAGAGGCAGTaGGGTCTCCTCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSHCQRQ*GLLSGC
Trigger: ACACCCACTGAGGAGACCTCACTGCCTCTGGCAGTG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCACTGCCAGAGGCAGTaGGGTCTCCTCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRHCQRQ*GLLSGC
Trigger: ACACCCACTGAGGAGACCTCACTGCCTCTGGCAGTG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCACTGCCAGAGGCAGTaGGGTCTCCTCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVHCQRQ*GLLSGC
Trigger: ACACCCACTGAGGAGACCTCACTGCCTCTGGCAGTG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGGCTCCTTCAGCAGCTaGCAAGGAGTCTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDGSFSS*QGVCPK
Trigger: CTTCGGGCAGACTCCTTGTCAGCTGCTGAAGGAGCC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGCTCCTTCAGCAGCTaGCAAGGAGTCTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGSFSS*QGVCPK
Trigger: CTTCGGGCAGACTCCTTGTCAGCTGCTGAAGGAGCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCCAGTGGCCACCACTaGAGAGCAGCTTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPSGHH*RAAFRQ
Trigger: CTGACGGAAAGCTGCTCTTCAGTGGTGGCCACTGGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCCAGTGGCCACCACTaGAGAGCAGCTTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPSGHH*RAAFRQ
Trigger: CTGACGGAAAGCTGCTCTTCAGTGGTGGCCACTGGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTCCGTCAGGGTCACTaGAGCCCGCAACCTCCCATT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLRQGH*SPQPPI
Trigger: AATGGGAGGTTGCGGGCTTCAGTGACCCTGACGGAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTCCGTCAGGGTCACTaGAGCCCGCAACCTCCCATT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLRQGH*SPQPPI
Trigger: AATGGGAGGTTGCGGGCTTCAGTGACCCTGACGGAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGGCCCACCAGCACATaGCTGCGCTCCTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRPTST*LRSLVT
Trigger: TGTGACCAAGGAGCGCAGTCATGTGCTGGTGGGCCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGCAGGTCAGCACTCTaGCCACGTGCACTGCGATGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSCRSAL*PRALRW
Trigger: CCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGCAGGTCAGCACTCTaGCCACGTGCACTGCGATGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDCRSAL*PRALRW
Trigger: CCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTACATTGACCAGGTTCTaGCTGAAGGGTCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSTLTRF*LKGRRP
Trigger: CGGGCGCCGACCCTTCAGTCAGAACCTGGTCAATGT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGACATTGACCAGGTTCTaGCTGAAGGGTCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRTLTRF*LKGRRP
Trigger: CGGGCGCCGACCCTTCAGTCAGAACCTGGTCAATGT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTAGGAGGCTGCGCTTaGTGCAGTCTGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLGGCA*CSLVVA
Trigger: TGCGACCACCAGACTGCATCAAGCGCAGCCTCCTAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTAGGAGGCTGCGCTTaGTGCAGTCTGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLGGCA*CSLVVA
Trigger: TGCGACCACCAGACTGCATCAAGCGCAGCCTCCTAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTCTGGAGATACAACCTaGGGGACTGTCCCTACAAAC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGSGDTT*GTVPTN
Trigger: GTTTGTAGGGACAGTCCCTCAGGTTGTATCTCCAGA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGTGCCGTCGAGTGCTaGGCTGCCTGCTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSAVEC*AACCFS
Trigger: ACTGAAGCAGCAGGCAGCGCAGCACTCGACGGCACT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGTGCCGTCGAGTGCTaGGCTGCCTGCTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSAVEC*AACCFS
Trigger: ACTGAAGCAGCAGGCAGCGCAGCACTCGACGGCACT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGTGCCGTCGAGTGCTaGGCTGCCTGCTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSAVEC*AACCFS
Trigger: ACTGAAGCAGCAGGCAGCGCAGCACTCGACGGCACT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCATCAGGGACTCCAGTaGAGCCAGGTCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDHQGLQ*SQVLFP
Trigger: GGGGAAGAGGACCTGGCTGCACTGGAGTCCCTGATG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCATCAGGGACTCCAGTaGAGCCAGGTCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRHQGLQ*SQVLFP
Trigger: GGGGAAGAGGACCTGGCTGCACTGGAGTCCCTGATG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCGATTGTGTTGAGTTaGATGAGGTACTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAAIVLS*MRYSKL
Trigger: CAACTTTGAGTACCTCATGCAACTCAACACAATCGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCCACCGAGTGGAACTaGCGGTCAGAGCAGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDATEWN*RSEQSK
Trigger: CTTCGACTGCTCTGACCGGCAGTTCCACTCGGTGGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCCACCGAGTGGAACTaGCGGTCAGAGCAGTCGAAG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSATEWN*RSEQSK
Trigger: CTTCGACTGCTCTGACCGGCAGTTCCACTCGGTGGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCCACCGAGTGGAACTaGCGGTCAGAGCAGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRATEWN*RSEQSK
Trigger: CTTCGACTGCTCTGACCGGCAGTTCCACTCGGTGGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCGCTCCCGTTCATCTaGCACGTGGTCCAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPLPFI*HVVQVN
Trigger: GTTGACCTGGACCACGTGGCAGATGAACGGGAGCGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCGCTCCCGTTCATCTaGCACGTGGTCCAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPLPFI*HVVQVN
Trigger: GTTGACCTGGACCACGTGGCAGATGAACGGGAGCGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGAAGACGCCACACCATaGACGTGGTATCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSREDATP*TWYPGS
Trigger: GCTCCCGGGATACCACGTGCATGGTGTGGCGTCTTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGTCAGGGCTGTGGGCTaGTCCGTCAGGGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDVRAVG*SVRVTE
Trigger: TTCAGTGACCCTGACGGAGCAGCCCACAGCCCTGAC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTCCGCGCGAACTGGCTaGTGCGTACCTCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSARTG*CVPQKA
Trigger: AGCCTTCTGAGGTACGCAGCAGCCAGTTCGCGCGGA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTCCGCGCGAACTGGCTaGTGCGTACCTCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSARTG*CVPQKA
Trigger: AGCCTTCTGAGGTACGCAGCAGCCAGTTCGCGCGGA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTATGTTGAGCAATTCCTaGAACAGCCTGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGMLSNS*NSLWVG
Trigger: CCCTACCCACAGGCTGTTGCAGGAATTGCTCAACAT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGTGTCCTGGGTGCCTaGGAGGGTAGAGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSVLGA*EGRADA
Trigger: AGCGTCAGCTCTACCCTCGCAGGCACCCAGGACACT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGTGTCCTGGGTGCCTaGGAGGGTAGAGCTGACGCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSVLGA*EGRADA
Trigger: AGCGTCAGCTCTACCCTCGCAGGCACCCAGGACACT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTCAGGCTTGAAGGGTaGTGGCTCATTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLRLEG*WLIGPQ
Trigger: CTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAAGTTCAATACAACCTaGATGTCTTCCACCGAGAAG +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGKFNTT*MSSTEK
Trigger: CTTCTCGGTGGAAGACATGCAGGTTGTATTGAACTT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAATCGTCACCGGTAGCTaGCAAAAAGTTCAATACAAC +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGIVTGS*QKVQYN
Trigger: GTTGTATTGAACTTTTTGGCAGCTACCGGTGACGAT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGCAGCCACAGTGCCTaGTGGGAAAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSSHSA*WERLAR
Trigger: CCTGGCCAACCTTTCCCAGCAGGCACTGTGGCTGCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGCAGCCACAGTGCCTaGTGGGAAAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSSHSA*WERLAR
Trigger: CCTGGCCAACCTTTCCCAGCAGGCACTGTGGCTGCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGTCGGCACTGCGGTCTaGAGCAGTGTGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVVGTAV*SSVCSF
Trigger: GAAGCTGCACACACTGCTGCAGACCGCAGTGCCGAC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGTCGGCACTGCGGTCTaGAGCAGTGTGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSVGTAV*SSVCSF
Trigger: GAAGCTGCACACACTGCTGCAGACCGCAGTGCCGAC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGTCGGCACTGCGGTCTaGAGCAGTGTGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDVGTAV*SSVCSF
Trigger: GAAGCTGCACACACTGCTGCAGACCGCAGTGCCGAC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGGGGCTTCCATTGGTaGGTGGTAAGGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRWGFHW*VVRRAA
Trigger: GGCTGCCCTCCTTACCACCCACCAATGGAAGCCCCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGGGGCTTCCATTGGTaGGTGGTAAGGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSWGFHW*VVRRAA
Trigger: GGCTGCCCTCCTTACCACCCACCAATGGAAGCCCCA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGGGCGCCGGAAGTCATaGCCGATGCCTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDGRRKS*PMPSSV
Trigger: AACAGAGGAAGGCATCGGCCATGACTTCCGGCGCCC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAGTTGGTTGAGGTTCTaGAAGATGCTTGGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: AAASEADARSPLSRRGAGSWLRF*KMLGEL
Trigger: TAACTCACCAAGCATCTTCCAGAACCTCAACCAACT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAGTTGGTTGAGGTTCTaGAAGATGCTTGGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDSWLRF*KMLGEL
Trigger: TAACTCACCAAGCATCTTCCAGAACCTCAACCAACT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGGCTGCCATCCCAGTaGCCACCACTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRLPSQ*PPLKSS
Trigger: GCTGCTCTTCAGTGGTGGCCACTGGGATGGCAGCCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTAATGCTGCCACAAACTaGCCTCGACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGNAATN*PRRTVC
Trigger: ACACACTGTACGTCGAGGCCAGTTTGTGGCAGCATT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCGCAATTTGTTCAAGTaGAGGATATGTAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDRNLFK*RICREH
Trigger: GTGCTCTCTACATATCCTCCACTTGAACAAATTGCG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCGCAATTTGTTCAAGTaGAGGATATGTAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGARNLFK*RICREH
Trigger: GTGCTCTCTACATATCCTCCACTTGAACAAATTGCG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGCCTCCGCGCGAACTaGCTGCTGCGTACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSLRAN*LLRTSE
Trigger: TTCTGAGGTACGCAGCAGCCAGTTCGCGCGGAGGCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGCCTCCGCGCGAACTaGCTGCTGCGTACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSLRAN*LLRTSE
Trigger: TTCTGAGGTACGCAGCAGCCAGTTCGCGCGGAGGCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGCCTCCGCGCGAACTaGCTGCTGCGTACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSLRAN*LLRTSE
Trigger: TTCTGAGGTACGCAGCAGCCAGTTCGCGCGGAGGCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCACAGGTGGTGCGACTaGCAGGGCAGCTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVHRWCD*QGSCHR
Trigger: TCTGTGACAGCTGCCCTGCCAGTCGCACCACCTGTG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTACAGTTGTTTCCGCTaGAGGGGCCGGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSYSCFR*RGRLGA
Trigger: AGCTCCCAGCCGGCCCCTCCAGCGGAAACAACTGTA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTACAGTTGTTTCCGCTaGAGGGGCCGGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDYSCFR*RGRLGA
Trigger: AGCTCCCAGCCGGCCCCTCCAGCGGAAACAACTGTA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACACGCGGGAAGCCCTGTaGTGGTTGTCGTTGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDTREAL*WLSLCG
Trigger: ACCGCACAACGACAACCACCACAGGGCTTCCCGCGT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCACCCTCCAGAGATGTaGGGCTTCCCCACCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDHPPEM*GFPTEC
Trigger: ACACTCGGTGGGGAAGCCCCACATCTCTGGAGGGTG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCACCCTCCAGAGATGTaGGGCTTCCCCACCGAGTGT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVHPPEM*GFPTEC
Trigger: ACACTCGGTGGGGAAGCCCCACATCTCTGGAGGGTG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGGCTTGAAGGGTGCTaGCTCATTGGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRLEGC*LIGPQA
Trigger: AGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGGCTTGAAGGGTGCTaGCTCATTGGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRLEGC*LIGPQA
Trigger: AGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACATGATGGCAGGACCCTaGCACTGCACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDMMAGP*HCTRLS
Trigger: GGAGAGCCTGGTGCAGTGCCAGGGTCCTGCCATCAT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCATGATGGCAGGACCCTaGCACTGCACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVMMAGP*HCTRLS
Trigger: GGAGAGCCTGGTGCAGTGCCAGGGTCCTGCCATCAT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGATGATGGCAGGACCCTaGCACTGCACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRMMAGP*HCTRLS
Trigger: GGAGAGCCTGGTGCAGTGCCAGGGTCCTGCCATCAT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCCTGGCAGAGCTaGGGAGAGATGCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRPWQS*GEMLSS
Trigger: GGAAGAGAGCATCTCTCCCCAGCTCTGCCAGGGCCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCACATTGGAGAGACTaGAGCTGTGGCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAHWRD*SCGGLG
Trigger: CCCAAGGCCGCCACAGCTCCAGTCTCTCCAATGTGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCACATTGGAGAGACTaGAGCTGTGGCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAHWRD*SCGGLG
Trigger: CCCAAGGCCGCCACAGCTCCAGTCTCTCCAATGTGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGCCACAGTGCCTGCTaGGAAAGGTTGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSHSAC*ERLARP
Trigger: AGGCCTGGCCAACCTTTCCCAGCAGGCACTGTGGCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGCCACAGTGCCTGCTaGGAAAGGTTGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSHSAC*ERLARP
Trigger: AGGCCTGGCCAACCTTTCCCAGCAGGCACTGTGGCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCTATTGGCGAGATGTaGCCAGGCTCCCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAIGEM*PGSQAI
Trigger: GATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGAGATTCAGGCAGTCTaGAGATACAACCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGEIQAV*RYNLRD
Trigger: GTCCCTCAGGTTGTATCTCCAGACTGCCTGAATCTC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGAACCTGCTTGTCGATaGAGTGGCGCCATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVEPACR*SGAIRL
Trigger: CAGCCGAATGGCGCCACTTCATCGACAAGCAGGTTC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGAACCTGCTTGTCGATaGAGTGGCGCCATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSEPACR*SGAIRL
Trigger: CAGCCGAATGGCGCCACTTCATCGACAAGCAGGTTC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCTCCGGAGGGGCACTaGTTTTGGCCTCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPPEGH*FWPLWS
Trigger: TGACCAAAGAGGCCAAAATCAGTGCCCCTCCGGAGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCCTCCGGAGGGGCACTaGTTTTGGCCTCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDPPEGH*FWPLWS
Trigger: TGACCAAAGAGGCCAAAATCAGTGCCCCTCCGGAGG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTGGAAGATGCTTGGTaGGTTAGTGTCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLEDAW*VSVQPG
Trigger: GCCCGGCTGGACACTAACTCACCAAGCATCTTCCAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTGGAAGATGCTTGGTaGGTTAGTGTCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLEDAW*VSVQPG
Trigger: GCCCGGCTGGACACTAACTCACCAAGCATCTTCCAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCCATGGCTCTCCTGTaGGGATCCTTTCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPMALL*GSFQLS
Trigger: GCTGAGCTGAAAGGATCCTCACAGGAGAGCCATGGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCACCAAAGAGGTGGATaGGCCGCAACAGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDHQRGG*AATATW
Trigger: CCACGTTGCTGTTGCGGCTCATCCACCTCTTTGGTG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTTGGCCAGTCAGCATTaGGAATGTGGAAGTAACCCT +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGLASQH*ECGSNP
Trigger: AGGGTTACTTCCACATTCTCAATGCTGACTGGCCAA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGCCAATGCGCTCCTTaGACACCTCCTTGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSQCAP*TPPWPK
Trigger: CTTCGGCCAAGGAGGTGTTCAAGGAGCGCATTGGCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGTTCACCCTCAGGCTTaGAGGGTGCTGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVVHPQA*RVLAHW
Trigger: CCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAAC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGCACCAGGCTCTCCTaGTTCACGGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDCTRLS*FTVWFC
Trigger: GCAGAACCACACCGTGAATCAGGAGAGCCTGGTGCA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTCCAGAGGTGAAAGTTaGAGAGCAGGTGCTGATAGA +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGSRGES*RAGADR
Trigger: TCTATCAGCACCTGCTCTTCAACTTTCACCTCTGGA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGACATGTACTGGATGTaGCCCAGGCGCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRDMYWM*PRRTAK
Trigger: CTTCGCTGTGCGCCTGGGTCACATCCAGTACATGTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGACATGTACTGGATGTaGCCCAGGCGCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVDMYWM*PRRTAK
Trigger: CTTCGCTGTGCGCCTGGGTCACATCCAGTACATGTC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGGGCAAGGGGACTCTaGAGGCAGGAAGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRARGL*RQEDVR
Trigger: TCTGACGTCTTCCTGCCTTCAGAGTCCCCTTGCCCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCGTCGAGTGCTGCGCTaGCTGCTGCTTCAGTACAGA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRRVLR*LLLQYR
Trigger: TCTGTACTGAAGCAGCAGGCAGCGCAGCACTCGACG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCGTCGAGTGCTGCGCTaGCTGCTGCTTCAGTACAGA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRRVLR*LLLQYR
Trigger: TCTGTACTGAAGCAGCAGGCAGCGCAGCACTCGACG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTCTGTAGCTGGACATaGAGGGACGTGAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLCSWT*RDVKGS
Trigger: GGAGCCCTTCACGTCCCTGCATGTCCAGCTACAGAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTCTGTAGCTGGACATaGAGGGACGTGAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLCSWT*RDVKGS
Trigger: GGAGCCCTTCACGTCCCTGCATGTCCAGCTACAGAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTCTGTAGCTGGACATaGAGGGACGTGAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLCSWT*RDVKGS
Trigger: GGAGCCCTTCACGTCCCTGCATGTCCAGCTACAGAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAAGTCACTCGTAGGCTaGCATCCCAGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVKSLVG*HPSGHH
Trigger: GTGGTGGCCACTGGGATGGCAGCCTACGAGTGACTT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAAGTCACTCGTAGGCTaGCATCCCAGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDKSLVG*HPSGHH
Trigger: GTGGTGGCCACTGGGATGGCAGCCTACGAGTGACTT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGCACTCTGACCACGTaGACTGCGATGGCATCGGTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSTLTT*TAMASV
Trigger: CACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGCACTCTGACCACGTaGACTGCGATGGCATCGGTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSTLTT*TAMASV
Trigger: CACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGCACTCTGACCACGTaGACTGCGATGGCATCGGTG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSTLTT*TAMASV
Trigger: CACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGCACCAGCACTGGCTaGTCGTTGCGGATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSTSTG*SLRIGG
Trigger: TCCACCAATCCGCAACGAGCAGCCAGTGCTGGTGCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGCACCAGCACTGGCTaGTCGTTGCGGATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSTSTG*SLRIGG
Trigger: TCCACCAATCCGCAACGAGCAGCCAGTGCTGGTGCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCAGCAGAACACCCATaGCCCCTACGCAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAAEHP*PLRSSP
Trigger: TGGTGAACTGCGTAGGGGGCATGGGTGTTCTGCTGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCAGCAGAACACCCATaGCCCCTACGCAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAAEHP*PLRSSP
Trigger: TGGTGAACTGCGTAGGGGGCATGGGTGTTCTGCTGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGAGAAAGGCAGCCACTaGGTTCCTCTCCATCCGGTC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSEKGSH*VPLHPV
Trigger: GACCGGATGGAGAGGAACGCAGTGGCTGCCTTTCTC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGAGAAAGGCAGCCACTaGGTTCCTCTCCATCCGGTC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDEKGSH*VPLHPV
Trigger: GACCGGATGGAGAGGAACGCAGTGGCTGCCTTTCTC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCCAGCGGGGAGGGTGTaGCAGGCTGGCTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDPAGRV*QAGWPE
Trigger: CTCCGGCCAGCCAGCCTGGCACACCCTCCCCGCTGG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACACCTGGTTCCGTAGCTaGGTGTGGGATGGGATAGGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDTWFRS*VWDGIG
Trigger: CCCTATCCCATCCCACACCCAGCTACGGAACCAGGT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCACCTGGTTCCGTAGCTaGGTGTGGGATGGGATAGGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVTWFRS*VWDGIG
Trigger: CCCTATCCCATCCCACACCCAGCTACGGAACCAGGT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGACCTGGTTCCGTAGCTaGGTGTGGGATGGGATAGGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRTWFRS*VWDGIG
Trigger: CCCTATCCCATCCCACACCCAGCTACGGAACCAGGT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGGGGCTTCCATTaGTGGGTGGTAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRWGFH*WVVRRA
Trigger: TGCCCTCCTTACCACCCACCAATGGAAGCCCCACCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGGTGGGGCTTCCATTaGTGGGTGGTAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRWGFH*WVVRRA
Trigger: TGCCCTCCTTACCACCCACCAATGGAAGCCCCACCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGGTGGGGCTTCCATTaGTGGGTGGTAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRWGFH*WVVRRA
Trigger: TGCCCTCCTTACCACCCACCAATGGAAGCCCCACCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCACACCGATGGGTTTaGACAGGTCCCGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPHRWV*TGPGRQ
Trigger: CTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCCACACCGATGGGTTTaGACAGGTCCCGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDPHRWV*TGPGRQ
Trigger: CTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCACCCACCTTCTCGTTaGTCAACTGGAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVHPPSR*STGGSP
Trigger: TGGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCACCCACCTTCTCGTTaGTCAACTGGAGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRHPPSR*STGGSP
Trigger: TGGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCCTGGCGGTGTTTCTaGATGAAATCCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAWRCF*MKSSGL
Trigger: CAGCCCCGAGGATTTCATCCAGAAACACCGCCAGGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCCTGGCGGTGTTTCTaGATGAAATCCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAWRCF*MKSSGL
Trigger: CAGCCCCGAGGATTTCATCCAGAAACACCGCCAGGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGCCCAGCAGCCCACTaGCACTTACAGTCACCTCAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRCPAAH*HLQSPQ
Trigger: CTGAGGTGACTGTAAGTGCCAGTGGGCTGCTGGGCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000131017.8
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTCGTTGCGGATTGGTaGAGGTGGGTGCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLVADW*RWVHAV
Trigger: CACAGCATGCACCCACCTCCACCAATCCGCAACGAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTGCTCGTTGCGGATTaGTGGAGGTGGGTGCATGCT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLLVAD*WRWVHA
Trigger: AGCATGCACCCACCTCCACCAATCCGCAACGAGCAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTGCTCGTTGCGGATTaGTGGAGGTGGGTGCATGCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLLVAD*WRWVHA
Trigger: AGCATGCACCCACCTCCACCAATCCGCAACGAGCAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTGCTCGTTGCGGATTaGTGGAGGTGGGTGCATGCT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLLVAD*WRWVHA
Trigger: AGCATGCACCCACCTCCACCAATCCGCAACGAGCAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGGGCTTCATGGAAGATaGCTACAGCCCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRGLHGR*LQPPAH
Trigger: GTGAGCTGGGGGCTGTAGCCATCTTCCATGAAGCCC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGGCTTCATGGAAGATaGCTACAGCCCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGLHGR*LQPPAH
Trigger: GTGAGCTGGGGGCTGTAGCCATCTTCCATGAAGCCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGTTGCAGGGCTTCATaGAAGATGGCTACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGCRAS*KMATAP
Trigger: GGGGGCTGTAGCCATCTTCCATGAAGCCCTGCAACC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCGCTTGATGCAGTCTaGTGGTCGCACAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVALDAV*WSHKCG
Trigger: GCCACACTTGTGCGACCACCAGACTGCATCAAGCGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCGCTTGATGCAGTCTaGTGGTCGCACAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSALDAV*WSHKCG
Trigger: GCCACACTTGTGCGACCACCAGACTGCATCAAGCGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTCACTCCACAGCTCCTaGTTACCGTGGCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSLHSS*LPWPSA
Trigger: TGCTGAGGGCCACGGTAACCAGGAGCTGTGGAGTGA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGTAATAGAAGACATTaGGGGCCTCCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSNRRH*GPPRPL
Trigger: CAGCGGCCGAGGAGGCCCTCAATGTCTTCTATTACT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGTAATAGAAGACATTaGGGGCCTCCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSNRRH*GPPRPL
Trigger: CAGCGGCCGAGGAGGCCCTCAATGTCTTCTATTACT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAACCTGCTGGGGGTCCTaGGCAGGGCCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPTCWGS*AGPRPQ
Trigger: CTGGGGCCGTGGCCCTGCTCAGGACCCCCAGCAGGT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCACAGCGAAGTCACTaGGGGTCCAGAGGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAQRSH*GSRGES
Trigger: ACTTTCACCTCTGGACCCTCAGTGACTTCGCTGTGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCACAGCGAAGTCACTaGGGGTCCAGAGGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAQRSH*GSRGES
Trigger: ACTTTCACCTCTGGACCCTCAGTGACTTCGCTGTGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGCACTGGAGAACCCTaGAGCAGGGTTAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRCTGEP*SRVSNS
Trigger: GCTGTTGCTAACCCTGCTTCAGGGTTCTCCAGTGCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGAGTGCTGCGCTGCCTaGTGCTTCAGTACAGATGCA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDECCAA*CFSTDA
Trigger: TGCATCTGTACTGAAGCAGCAGGCAGCGCAGCACTC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGAGTGCTGCGCTGCCTaGTGCTTCAGTACAGATGCA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRECCAA*CFSTDA
Trigger: TGCATCTGTACTGAAGCAGCAGGCAGCGCAGCACTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTCACAAGCTGGGCATaGTTGGGATTCACCACACCG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLTSWA*LGFTTP
Trigger: CGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTCACAAGCTGGGCATaGTTGGGATTCACCACACCG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLTSWA*LGFTTP
Trigger: CGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCCGCAGGTGTCCAGTaGAAGGCAGGTCACTATATC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAAGVQ*KAGHYI
Trigger: GATATAGTGACCTGCCTTGCACTGGACACCTGCGGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCCGCAGGTGTCCAGTaGAAGGCAGGTCACTATATC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAAGVQ*KAGHYI
Trigger: GATATAGTGACCTGCCTTGCACTGGACACCTGCGGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCCGCAGGTGTCCAGTaGAAGGCAGGTCACTATATC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAAGVQ*KAGHYI
Trigger: GATATAGTGACCTGCCTTGCACTGGACACCTGCGGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCCGCAGGTGTCCAGTaGAAGGCAGGTCACTATATC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAAGVQ*KAGHYI
Trigger: GATATAGTGACCTGCCTTGCACTGGACACCTGCGGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCCCCCAGTGCTAAGTaGGATATAGGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAPSAK*DIGPGS
Trigger: ACTGCCTGGACCTATATCGCACTTAGCACTGGGGGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCCCCCAGTGCTAAGTaGGATATAGGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAPSAK*DIGPGS
Trigger: ACTGCCTGGACCTATATCGCACTTAGCACTGGGGGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCCCCCAGTGCTAAGTaGGATATAGGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAPSAK*DIGPGS
Trigger: ACTGCCTGGACCTATATCGCACTTAGCACTGGGGGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCCCCCAGTGCTAAGTaGGATATAGGTCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAPSAK*DIGPGS
Trigger: ACTGCCTGGACCTATATCGCACTTAGCACTGGGGGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCACCAGCACATGACTaGGCTCCTTGGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPPAHD*APWSQT
Trigger: TGTCTGTGACCAAGGAGCGCAGTCATGTGCTGGTGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCACCAGCACATGACTaGGCTCCTTGGTCACAGACA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPPAHD*APWSQT
Trigger: TGTCTGTGACCAAGGAGCGCAGTCATGTGCTGGTGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCACTCACAGCCATCTaGCCATTCGCCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSALTAI*PFAFPP
Trigger: AGGAGGAAAGGCGAATGGGCAGATGGCTGTGAGTGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTACACCTAGCAGTCCCTaGACAGAGCCAGCACTCACA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSTPSSP*TEPALT
Trigger: TGTGAGTGCTGGCTCTGTGCAGGGACTGCTAGGTGT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGATGCAGAACGTGCACTaGACCCACCAGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRMQNVH*THQCSQ
Trigger: CTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCAT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTATGCAGAACGTGCACTaGACCCACCAGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSMQNVH*THQCSQ
Trigger: CTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCAT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACATGAGGCGAATAAGATaGTCAAAGCAATTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDMRRIR*SKQLLL
Trigger: TAGCAACAATTGCTTTGAGCATCTTATTCGCCTCAT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGATGAGGCGAATAAGATaGTCAAAGCAATTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: AAAASEADARSPLSRRGAMRRIR*SKQLLL
Trigger: TAGCAACAATTGCTTTGAGCATCTTATTCGCCTCAT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCACTCGACCCAGAGCTTaGAGCAAGGCTAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVTRPRA*SKANSC
Trigger: GCAGCTGTTAGCCTTGCTGCAAGCTCTGGGTCGAGT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACACTCGACCCAGAGCTTaGAGCAAGGCTAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDTRPRA*SKANSC
Trigger: GCAGCTGTTAGCCTTGCTGCAAGCTCTGGGTCGAGT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGGTGGTTGTCGTTGTaGGGTGCCCAGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRWWLSL*GAQQNQ
Trigger: TTGGTTCTGCTGGGCACCGCACAACGACAACCACCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGGTGGTTGTCGTTGTaGGGTGCCCAGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSWWLSL*GAQQNQ
Trigger: TTGGTTCTGCTGGGCACCGCACAACGACAACCACCA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGCGCCATTCGGCTGTaGCACAAAAAGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGAIRL*HKKPGS
Trigger: ACTTCCAGGCTTTTTGTGCCACAGCCGAATGGCGCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGGCGCCATTCGGCTGTaGCACAAAAAGCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDGAIRL*HKKPGS
Trigger: ACTTCCAGGCTTTTTGTGCCACAGCCGAATGGCGCC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGCTTGTCGATGAAGTaGCGCCATTCGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSCLSMK*RHSAVA
Trigger: TGCCACAGCCGAATGGCGCCACTTCATCGACAAGCA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGCTTGTCGATGAAGTaGCGCCATTCGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRCLSMK*RHSAVA
Trigger: TGCCACAGCCGAATGGCGCCACTTCATCGACAAGCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGCTTGTCGATGAAGTaGCGCCATTCGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDCLSMK*RHSAVA
Trigger: TGCCACAGCCGAATGGCGCCACTTCATCGACAAGCA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGTGAGGTCTCCTCAGTaGGTGTCATGGGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRVRSPQ*VSWELH
Trigger: GTGAAGCTCCCATGACACCCACTGAGGAGACCTCAC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGTGAGGTCTCCTCAGTaGGTGTCATGGGAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSVRSPQ*VSWELH
Trigger: GTGAAGCTCCCATGACACCCACTGAGGAGACCTCAC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTTAGGTAGCCTTGGGTaGGTGGCCTTAGGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLGSLG*VALGAE
Trigger: TTCTGCGCCTAAGGCCACCCACCCAAGGCTACCTAA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTTAGGTAGCCTTGGGTaGGTGGCCTTAGGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLGSLG*VALGAE
Trigger: TTCTGCGCCTAAGGCCACCCACCCAAGGCTACCTAA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTTAGGTAGCCTTGGGTaGGTGGCCTTAGGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLGSLG*VALGAE
Trigger: TTCTGCGCCTAAGGCCACCCACCCAAGGCTACCTAA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGTCCCGGAAGACAGCTaGATTGCTGAGGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDVPEDS*IAEVQD
Trigger: GTCTTGGACCTCAGCAATCCAGCTGTCTTCCGGGAC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGATTCACCACACCGATaGGTTTGGACAGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRDSPHR*VWTGPG
Trigger: TCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCAAGCTGGGCATGCTTaGGATTCACCACACCGATGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSQAGHA*DSPHRW
Trigger: CCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCAAGCTGGGCATGCTTaGGATTCACCACACCGATGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVQAGHA*DSPHRW
Trigger: CCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCAAGCTGGGCATGCTTaGGATTCACCACACCGATGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRQAGHA*DSPHRW
Trigger: CCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGTAGTTTCTGCACCTTaGGGCTCCCCATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSVVSAP*GSPWWD
Trigger: ATCCCACCATGGGGAGCCCCAAGGTGCAGAAACTAC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGTAGTTTCTGCACCTTaGGGCTCCCCATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVVVSAP*GSPWWD
Trigger: ATCCCACCATGGGGAGCCCCAAGGTGCAGAAACTAC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGTAGTTTCTGCACCTTaGGGCTCCCCATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRVVSAP*GSPWWD
Trigger: ATCCCACCATGGGGAGCCCCAAGGTGCAGAAACTAC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGTAGTTTCTGCACCTTaGGGCTCCCCATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDVVSAP*GSPWWD
Trigger: ATCCCACCATGGGGAGCCCCAAGGTGCAGAAACTAC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGACACAGCCAGGCATaGAAGGTAAAGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRHSQA*KVKPAP
Trigger: AGGAGCCGGCTTTACCTTCCATGCCTGGCTGTGTCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGACACAGCCAGGCATaGAAGGTAAAGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRHSQA*KVKPAP
Trigger: AGGAGCCGGCTTTACCTTCCATGCCTGGCTGTGTCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGACACAGCCAGGCATaGAAGGTAAAGCCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRHSQA*KVKPAP
Trigger: AGGAGCCGGCTTTACCTTCCATGCCTGGCTGTGTCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTAGCAACAAGACCCTaGAGACCACAGTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLATRP*RPQSCS
Trigger: GCTGCACGACTGTGGTCTCCAGGGTCTTGTTGCTAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTAGCAACAAGACCCTaGAGACCACAGTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLATRP*RPQSCS
Trigger: GCTGCACGACTGTGGTCTCCAGGGTCTTGTTGCTAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTCTTCAGGGGTTTGCTaGGGGTTGCTCGTGTTCGAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSSGVC*GLLVFE
Trigger: CTCGAACACGAGCAACCCCCAGCAAACCCCTGAAGA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTCAGGGGTTTGCTaGGGGTTGCTCGTGTTCGAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSSGVC*GLLVFE
Trigger: CTCGAACACGAGCAACCCCCAGCAAACCCCTGAAGA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGCTCCTGGTTACCGTaGCCCTCAGCACACAGGAAA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSSWLP*PSAHRK
Trigger: TTTCCTGTGTGCTGAGGGCCACGGTAACCAGGAGCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGCTCCTGGTTACCGTaGCCCTCAGCACACAGGAAA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSSWLP*PSAHRK
Trigger: TTTCCTGTGTGCTGAGGGCCACGGTAACCAGGAGCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGCCCAGCAGCCCACTaGCACTTACAGTCACCAACA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVCPAAH*HLQSPT
Trigger: TGTTGGTGACTGTAAGTGCCAGTGGGCTGCTGGGCA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGCCCAGCAGCCCACTaGCACTTACAGTCACCAACA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSCPAAH*HLQSPT
Trigger: TGTTGGTGACTGTAAGTGCCAGTGGGCTGCTGGGCA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGGCATTCCAGAAGCCTaGCATGAGGTCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRGIPEA*HEVMAL
Trigger: AAGAGCCATGACCTCATGTCAGGCTTCTGGAATGCC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGCATTCCAGAAGCCTaGCATGAGGTCATGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGIPEA*HEVMAL
Trigger: AAGAGCCATGACCTCATGTCAGGCTTCTGGAATGCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGTTGGACTGGTCAATaGAGAAGAGTTCGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSWTGQ*RRVRAP
Trigger: CGGCGCTCGAACTCTTCTTCATTGACCAGTCCAACT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGTTGGACTGGTCAATaGAGAAGAGTTCGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSWTGQ*RRVRAP
Trigger: CGGCGCTCGAACTCTTCTTCATTGACCAGTCCAACT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATAGCCTGGCAAGGGGATaGCGCAGAGGACGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDSLARG*RRGRGH
Trigger: GTGGCCGCGTCCTCTGCGTCATCCCCTTGCCAGGCT...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGTCAAGTTCAGTGCTaGTGGCCACACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSCQVQC*WPHSSL
Trigger: CAGTGAGCTGTGTGGCCATCAGCACTGAACTTGACA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGTCAAGTTCAGTGCTaGTGGCCACACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRCQVQC*WPHSSL
Trigger: CAGTGAGCTGTGTGGCCATCAGCACTGAACTTGACA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGACGTACAGTGTGTATaGTCACAGTCCCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRDVQCV*SQSHPR
Trigger: CCGAGGATGGGACTGTGATCATACACACTGTACGTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGACGTACAGTGTGTATaGTCACAGTCCCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDDVQCV*SQSHPR
Trigger: CCGAGGATGGGACTGTGATCATACACACTGTACGTC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGACGTACAGTGTGTATaGTCACAGTCCCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSDVQCV*SQSHPR
Trigger: CCGAGGATGGGACTGTGATCATACACACTGTACGTC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTATATGTAGAGAGCACTaGGCGGTGCCCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSICREH*AVPSRT
Trigger: TGTTCTGCTGGGCACCGCTCAGTGCTCTCTACATAT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGATATGTAGAGAGCACTaGGCGGTGCCCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRICREH*AVPSRT
Trigger: TGTTCTGCTGGGCACCGCTCAGTGCTCTCTACATAT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCACCTGCTGGGGGTCCTaGGCAGGGCCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSTCWGS*AGPRPQ
Trigger: CTGGGGCCGTGGCCCTGCTCAGGACCCCCAGCAGGT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGGAGAAAGGCTCACTaGGGGAGGGAAAGCGAAAAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRRKAH*GRESEK
Trigger: CTTTTCGCTTTCCCTCCCTCAGTGAGCCTTTCTCCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCATCGAGGAGGAACTaGACTCCGTACTTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDASRRN*TPYFFR
Trigger: TCGGAAGAAGTACGGAGTTCAGTTCCTCCTCGATGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCATCGAGGAGGAACTaGACTCCGTACTTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSASRRN*TPYFFR
Trigger: TCGGAAGAAGTACGGAGTTCAGTTCCTCCTCGATGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGGTATCATCCCCACTaGTGTTGGGTTCTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRYHPH*CWVLAG
Trigger: GCCTGCTAGAACCCAACATCAGTGGGGATGATACCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGGTATCATCCCCACTaGTGTTGGGTTCTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRYHPH*CWVLAG
Trigger: GCCTGCTAGAACCCAACATCAGTGGGGATGATACCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATATCTCTCGCTGTACCCATTTCTGGGTAAGTCCCGAGGCACGAAGCATCTCCCGCGTCAGCACATCCTaGCAGCCAGCTTGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: DISRCTHFWVSPEARSISRVSTS*QPACRA
Trigger: GGCCCGACAAGCTGGCTGGCAGGATGTGCTGACGCG...GGAGATGCTTCGTGCCTCGGGACTTACCCAGAAATGGGTACAGCGAGAGATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123996.2
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGCGATTGTGTTGAGTTaGATGAGGTACTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGAIVLS*MRYSKL
Trigger: CAACTTTGAGTACCTCATGCAACTCAACACAATCGC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTTGTCGATTGTGCCTaGTGGGTCCTCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLVDCA*WVLKAL
Trigger: GAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTTGTCGATTGTGCCTaGTGGGTCCTCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLVDCA*WVLKAL
Trigger: GAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTTGTCGATTGTGCCTaGTGGGTCCTCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLVDCA*WVLKAL
Trigger: GAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGGAACTTGTCGATTGTaGCTGCTGGGTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDGTCRL*LLGPQS
Trigger: GCTTTGAGGACCCAGCAGGCACAATCGACAAGTTCC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGGAACTTGTCGATTGTaGCTGCTGGGTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRGTCRL*LLGPQS
Trigger: GCTTTGAGGACCCAGCAGGCACAATCGACAAGTTCC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGGTCGATCCATTCGTaGAGGTGGGTGGACACATAC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRSIHS*RWVDTY
Trigger: GTATGTGTCCACCCACCTGCACGAATGGATCGACCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTCGATCCATTCGTaGAGGTGGGTGGACACATAC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRSIHS*RWVDTY
Trigger: GTATGTGTCCACCCACCTGCACGAATGGATCGACCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCTGATTCAACAGCCTaGCACGGGGTAGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVADSTA*HGVVKS
Trigger: TGACTTCACTACCCCGTGGCAGGCTGTTGAATCAGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCTGATTCAACAGCCTaGCACGGGGTAGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRADSTA*HGVVKS
Trigger: TGACTTCACTACCCCGTGGCAGGCTGTTGAATCAGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGTCCGTATAAGACCTaGACAGGCTTTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDCPYKT*TGFGAS
Trigger: GCTGGCACCAAAGCCTGTGCAGGTCTTATACGGACA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGTCCGTATAAGACCTaGACAGGCTTTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVCPYKT*TGFGAS
Trigger: GCTGGCACCAAAGCCTGTGCAGGTCTTATACGGACA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCAGAACAAAGTCTTCTaGCACAGTCAGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDQNKVF*HSQGCG
Trigger: CCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCAGAACAAAGTCTTCTaGCACAGTCAGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRQNKVF*HSQGCG
Trigger: CCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGAGAGCACTGAGCGGTaGCCAGCAGAACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVESTER*PAEQSL
Trigger: AAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGAGAGCACTGAGCGGTaGCCAGCAGAACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDESTER*PAEQSL
Trigger: AAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCGGCGCCCGGGCACATaGACAATGGCCACGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDRRPGT*TMATQC
Trigger: GCACTGCGTGGCCATTGTGCATGTGCCCGGGCGCCG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGTTGTCGTTGTGCGGTaGCCAGCAGAACCAATACAG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSVVVVR*PAEPIQ
Trigger: CTGTATTGGTTCTGCTGGGCACCGCACAACGACAAC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGTTGTCGTTGTGCGGTaGCCAGCAGAACCAATACAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDVVVVR*PAEPIQ
Trigger: CTGTATTGGTTCTGCTGGGCACCGCACAACGACAAC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTAAGTTCAATACAACCTaGATGTCTTCCACCGAGAAG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGKFNTT*MSSTEK
Trigger: CTTCTCGGTGGAAGACATGCAGGTTGTATTGAACTT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGGGTTCTAGCAGGCTaGCATCTTCCAGCACATTGG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDWVLAG*HLPAHW
Trigger: CCAATGTGCTGGAAGATGGCAGCCTGCTAGAACCCA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGGGTTCTAGCAGGCTaGCATCTTCCAGCACATTGG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSWVLAG*HLPAHW
Trigger: CCAATGTGCTGGAAGATGGCAGCCTGCTAGAACCCA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTGGGTTCTAGCAGGCTaGCATCTTCCAGCACATTGG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRWVLAG*HLPAHW
Trigger: CCAATGTGCTGGAAGATGGCAGCCTGCTAGAACCCA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGGGTTTGCTGGGGGTTaGTCGTGTTCGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSGFAGG*SCSRYH
Trigger: ATGATACCTCGAACACGAGCAACCCCCAGCAAACCC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGGTTTGCTGGGGGTTaGTCGTGTTCGAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGFAGG*SCSRYH
Trigger: ATGATACCTCGAACACGAGCAACCCCCAGCAAACCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCACACAGGAAATCCTaGAGTAAACGGAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAHRKS*SKRSSH
Trigger: GTGGCTGCTCCGTTTACTGCAGGATTTCCTGTGTGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCCGGCGGGTCGGCACTaGGGTCTGCAGCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDPAGRH*GLQQCV
Trigger: CACACACTGCTGCAGACCGCAGTGCCGACCCGCCGG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTACACTGAGGTCAGCCTaGAGGGACAGCTGTACAACA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSTLRSA*RDSCTT
Trigger: TGTTGTACAGCTGTCCCTCCAGGCTGACCTCAGTGT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATATCTCTCGCTGTACCCATTTCTGGGTAAGTCCCGAGGCACGAAGCATCTCCGGTAGAGCTGGGGCCTaGGAGGAAGCGTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: DISRCTHFWVSPEARSISGRAGA*EEAWGT
Trigger: AGTCCCCCACGCTTCCTCCCAGGCCCCAGCTCTACC...GGAGATGCTTCGTGCCTCGGGACTTACCCAGAAATGGGTACAGCGAGAGATATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123996.2
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGTCCTCAAAGAAGGTaGGGCTTCCATTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSPQRR*GFHWWV
Trigger: CACCCACCAATGGAAGCCCCACCTTCTTTGAGGACT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGTCCTCAAAGAAGGTaGGGCTTCCATTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSPQRR*GFHWWV
Trigger: CACCCACCAATGGAAGCCCCACCTTCTTTGAGGACT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGTCCTCAAAGAAGGTaGGGCTTCCATTGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSPQRR*GFHWWV
Trigger: CACCCACCAATGGAAGCCCCACCTTCTTTGAGGACT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCTGAGGTCCAAGACTaGGGACACATAGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAEVQD*GHIVLQ
Trigger: TTGCAGGACTATGTGTCCCCAGTCTTGGACCTCAGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCTGAGGTCCAAGACTaGGGACACATAGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAEVQD*GHIVLQ
Trigger: TTGCAGGACTATGTGTCCCCAGTCTTGGACCTCAGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTTCTCCCTCACAAGCTaGGCATGCTTGGGATTCACC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRFSLTS*ACLGFT
Trigger: GGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTTCTCCCTCACAAGCTaGGCATGCTTGGGATTCACC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVFSLTS*ACLGFT
Trigger: GGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTTCTCCCTCACAAGCTaGGCATGCTTGGGATTCACC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSFSLTS*ACLGFT
Trigger: GGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTTCTCGTTGGTCAACTaGAGGCAGCCCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVFSLVN*RQPRSK
Trigger: CTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTTCTCGTTGGTCAACTaGAGGCAGCCCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDFSLVN*RQPRSK
Trigger: CTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCATGACTGCGCTCCTTaGTCACAGACACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSHDCAP*SQTHCG
Trigger: TCCACAGTGTGTCTGTGACCAAGGAGCGCAGTCATG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCATGACTGCGCTCCTTaGTCACAGACACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDHDCAP*SQTHCG
Trigger: TCCACAGTGTGTCTGTGACCAAGGAGCGCAGTCATG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGATGGCACCAAAGAGGTaGATGAGCCGCAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRMAPKR*MSRNSN
Trigger: GTTGCTGTTGCGGCTCATCCACCTCTTTGGTGCCAT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTACTGTCTTGACCAGATaGCCATCTTTGAAGACATTG +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGTVLTR*PSLKTL
Trigger: CAATGTCTTCAAAGATGGCCATCTGGTCAAGACAGT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCCCAGCCCAGGCCTGTaGAGGCTGGGACTGACTGGG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDPSPGL*RLGLTG
Trigger: CCCAGTCAGTCCCAGCCTCCACAGGCCTGGGCTGGG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCATCTTCCAGCACATTaGAGAGACTGGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDHLPAH*RDWSCG
Trigger: GCCACAGCTCCAGTCTCTCCAATGTGCTGGAAGATG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCATCTTCCAGCACATTaGAGAGACTGGAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVHLPAH*RDWSCG
Trigger: GCCACAGCTCCAGTCTCTCCAATGTGCTGGAAGATG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTTGATGCAGTCTGGTaGTCGCACAAGTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLDAVW*SHKCGR
Trigger: TCTGCCACACTTGTGCGACCACCAGACTGCATCAAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTTGATGCAGTCTGGTaGTCGCACAAGTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLDAVW*SHKCGR
Trigger: TCTGCCACACTTGTGCGACCACCAGACTGCATCAAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTTGATGCAGTCTGGTaGTCGCACAAGTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLDAVW*SHKCGR
Trigger: TCTGCCACACTTGTGCGACCACCAGACTGCATCAAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCATGGCATCGGTGTCCTaGTCAAGCACCTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVMASVS*SSTLLF
Trigger: GAACAGCAAGGTGCTTGACCAGGACACCGATGCCAT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCTTGTGTGGGAAGTTaGGGAAGTAGTTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPCVGS*GSSWTG
Trigger: ACCAGTCCAACTACTTCCTCAACTTCCCACACAAGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATAGGGCTCCACGCGGATaGGGTAGTGCATCACGCCCG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDRAPRG*GSASRP
Trigger: CGGGCGTGATGCACTACCTCATCCGCGTGGAGCCCT...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATAGGGCTCCACGCGGATaGGGTAGTGCATCACGCCCG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDRAPRG*GSASRP
Trigger: CGGGCGTGATGCACTACCTCATCCGCGTGGAGCCCT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCATGGCGAGCCTTCTaGGATTCATTTCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAWRAF*DSFPLD
Trigger: GTCAAGTGGAAATGAATCTCAGAAGGCTCGCCATGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCATGGCGAGCCTTCTaGGATTCATTTCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAWRAF*DSFPLD
Trigger: GTCAAGTGGAAATGAATCTCAGAAGGCTCGCCATGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCATGGCGAGCCTTCTaGGATTCATTTCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAWRAF*DSFPLD
Trigger: GTCAAGTGGAAATGAATCTCAGAAGGCTCGCCATGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCTGAGCCACTGCTGGTaGAGAAGCTGTACAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRLSHCW*RSCTVV
Trigger: AACAACTGTACAGCTTCTTCACCAGCAGTGGCTCAG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTGAGCCACTGCTGGTaGAGAAGCTGTACAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLSHCW*RSCTVV
Trigger: AACAACTGTACAGCTTCTTCACCAGCAGTGGCTCAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCACGCGTTCCGTACTaGCGTCATAGAAATACACGT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPRVPY*RHRNTR
Trigger: ACGTGTATTTCTATGACGGCAGTACGGAACGCGTGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCACGCGTTCCGTACTaGCGTCATAGAAATACACGT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPRVPY*RHRNTR
Trigger: ACGTGTATTTCTATGACGGCAGTACGGAACGCGTGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCACAACGATCAATTTaGCATCTTCCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPQRSI*HLPGPP
Trigger: TGGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCACAACGATCAATTTaGCATCTTCCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPQRSI*HLPGPP
Trigger: TGGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCATGTTGAGCAATTCCTaGAACAGCCTGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVMLSNS*NSLWVG
Trigger: CCCTACCCACAGGCTGTTGCAGGAATTGCTCAACAT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTTAGGGCAGATGGTTaGAGGGCTTCATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLRADG*RASWKM
Trigger: CATCTTCCATGAAGCCCTGCAACCATCTGCCCTAAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGGTAACCGCTCATTCTaGTGCAGTCTTCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRGNRSF*CSLRKI
Trigger: GATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGTAACCGCTCATTCTaGTGCAGTCTTCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGNRSF*CSLRKI
Trigger: GATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGGCGATCAAGCAGGTTaGACACACCTTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSGDQAG*THLQRA
Trigger: AGCTCTTTGAAGGTGTGTGCAACCTGCTTGATCGCC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGGCGATCAAGCAGGTTaGACACACCTTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDGDQAG*THLQRA
Trigger: AGCTCTTTGAAGGTGTGTGCAACCTGCTTGATCGCC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACCGGCGGGTCGGCACTaGGGTCTGCAGCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPPAGRH*GLQQCV
Trigger: CACACACTGCTGCAGACCGCAGTGCCGACCCGCCGG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAACCGCTCATTCTGCTaGAGTCTTCGCAAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVNRSFC*SLRKIW
Trigger: CCAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGTCGATTGTGCCTGCTaGGTCCTCAAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVVDCAC*VLKALI
Trigger: TATGAGAGCTTTGAGGACCCAGCAGGCACAATCGAC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGTCGATTGTGCCTGCTaGGTCCTCAAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDVDCAC*VLKALI
Trigger: TATGAGAGCTTTGAGGACCCAGCAGGCACAATCGAC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTCTGACTCCAGAGCCTaGCGGTGTTTCTGGATGAAA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSDSRA*RCFWMK
Trigger: TTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTCTGACTCCAGAGCCTaGCGGTGTTTCTGGATGAAA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSDSRA*RCFWMK
Trigger: TTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCATTCGTGCAGGTGGGTaGACACATACTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVIRAGG*THTLTP
Trigger: TGGAGTCAGAGTATGTGTCCACCCACCTGCACGAAT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACATTCGTGCAGGTGGGTaGACACATACTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDIRAGG*THTLTP
Trigger: TGGAGTCAGAGTATGTGTCCACCCACCTGCACGAAT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGCCGGGCGAGGCGATTaGCTGCTTCCTCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDAGRGD*LLPQPR
Trigger: TCTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAATGCTGCCACAAACTaGCCTCGACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDNAATN*PRRTVC
Trigger: ACACACTGTACGTCGAGGCCAGTTTGTGGCAGCATT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAATGCTGCCACAAACTaGCCTCGACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRNAATN*PRRTVC
Trigger: ACACACTGTACGTCGAGGCCAGTTTGTGGCAGCATT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTTTGTACAACAATCTaGCCTTCAGCCCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLCTTI*PSAPSA
Trigger: AGCACTGGGGGCTGAAGGCCAGATTGTTGTACAAAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTTTGTACAACAATCTaGCCTTCAGCCCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLCTTI*PSAPSA
Trigger: AGCACTGGGGGCTGAAGGCCAGATTGTTGTACAAAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTTTGTACAACAATCTaGCCTTCAGCCCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLCTTI*PSAPSA
Trigger: AGCACTGGGGGCTGAAGGCCAGATTGTTGTACAAAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGCTAACAGCTGCTCCTaGCAGCGGGCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDANSCS*QRAPRA
Trigger: AGCCCTGGGAGCCCGCTGCCAGGAGCAGCTGTTAGC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCCCCACCGAGTGTCCTaGGTGCCTGCGAGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDPHRVS*VPARVE
Trigger: CTCTACCCTCGCAGGCACCCAGGACACTCGGTGGGG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTGGATACGGTCCCGCTaGTGCCGCTGCCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSWIRSR*CRCPLL
Trigger: GAGCAGCGGGCAGCGGCATCAGCGGGACCGTATCCA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCAACCTCCCATTCACTaGATACAGGTGCAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDQPPIH*IQVQGV
Trigger: TACTCCTTGCACCTGTATTCAGTGAATGGGAGGTTG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCAACCTCCCATTCACTaGATACAGGTGCAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVQPPIH*IQVQGV
Trigger: TACTCCTTGCACCTGTATTCAGTGAATGGGAGGTTG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTTGGCCAGTCAGCATTaGGAATGTGGAAGTAACCCT +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLASQH*ECGSNP
Trigger: AGGGTTACTTCCACATTCTCAATGCTGACTGGCCAA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCAGCCATGCTGGGCGTaGGGTCAAAGTAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDQPCWA*GQSSAG
Trigger: CCCTGCGCTACTTTGACCTCACGCCCAGCATGGCTG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCTGACTGGGAGCGGGTaGGGGAAGGGTGAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDLTGSG*GKGECE
Trigger: CTCACACTCACCCTTCCCTCACCCGCTCCCAGTCAG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCCAGAGGTGAAAGTTaGAGAGCAGGTGCTGATAGA +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSRGES*RAGADR
Trigger: TCTATCAGCACCTGCTCTTCAACTTTCACCTCTGGA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATAGGCACTTCCGCACCTaGCTCCTCTGGCCTTCGAGG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDRHFRT*LLWPSR
Trigger: CCTCGAAGGCCAGAGGAGGCAGGTGCGGAAGTGCCT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAAACGCTCTGCATCCTaGAGGTTCTCTTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVKRSAS*RFSWKK
Trigger: CTTCTTCCAAGAGAACCTGCAGGATGCAGAGCGTTT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTATGAGGCGAATAAGATaGTCAAAGCAATTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: SEADARSPLSRRGAGLPGMRRIR*SKQLLL
Trigger: TAGCAACAATTGCTTTGAGCATCTTATTCGCCTCAT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGGGGGTCCGTGGCTCTaGAGGACCTCCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSGGPWL*RTSCRC
Trigger: GCACCTGCAGGAGGTCCTGCAGAGCCACGGACCCCC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCCCACCAGGCCTGCTTaGACACAGGTGGTGCGACTG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDPTRPA*TQVVRL
Trigger: CAGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCGGCGCCCGGGCACATaGACAATGGCCACGCAGTGC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRRPGT*TMATQC
Trigger: GCACTGCGTGGCCATTGTGCATGTGCCCGGGCGCCG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAACCGCTCATTCTGCTaGAGTCTTCGCAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVNRSFC*SLRKIL
Trigger: CAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCTGACATGAGGTCATaGCTCTTAGCATATGTGTCC +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPDMRS*LLAYVS
Trigger: GGACACATATGCTAAGAGCCATGACCTCATGTCAGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCTGACATGAGGTCATaGCTCTTAGCATATGTGTCC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPDMRS*LLAYVS
Trigger: GGACACATATGCTAAGAGCCATGACCTCATGTCAGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCCTGACATGAGGTCATaGCTCTTAGCATATGTGTCC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVPDMRS*LLAYVS
Trigger: GGACACATATGCTAAGAGCCATGACCTCATGTCAGG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGGTAGAGCTGGGGCCTaGGAGCCTGGCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPGRAGA*EPGKGM
Trigger: CATCCCCTTGCCAGGCTCCCAGGCCCCAGCTCTACC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGGTCAAAGCCATTCTaGTTCTCCAGGAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRSKPF*FSRKSG
Trigger: TCCTGACTTCCTGGAGAACCAGAATGGCTTTGACCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGGTCAAAGCCATTCTaGTTCTCCAGGAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRSKPF*FSRKSG
Trigger: TCCTGACTTCCTGGAGAACCAGAATGGCTTTGACCT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGAGCCGGGGTGGGTGTaGCTCCTTCAGCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDEPGWV*LLQQLT
Trigger: TGTCAGCTGCTGAAGGAGCCACACCCACCCCGGCTC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTGCTCTCAGAGCCAGTaGCACCTGCTGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDCSQSQ*HLLGVL
Trigger: CAGGACCCCCAGCAGGTGCCACTGGCTCTGAGAGCA...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCTGCTTGCACACAGGTaGTGCGACTGGCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDLLAHR*CDWQGS
Trigger: GCTGCCCTGCCAGTCGCACCACCTGTGTGCAAGCAG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGCTAACAGCTGCTCCTaGCAGCGGGCTCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPANSCS*QRAPRA
Trigger: AGCCCTGGGAGCCCGCTGCCAGGAGCAGCTGTTAGC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGCAGAGGCCCCCAGCTaGGTAAGCACGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDAEAPS*VSTEKT
Trigger: GGTCTTCTCCGTGCTTACCCAGCTGGGGGCCTCTGC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGCTGCCCGCTGCTCATaGGTGTGTCGTAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDAARCS*VCRSRH
Trigger: ATGCCTGCTACGACACACTCATGAGCAGCGGGCAGC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCACTGCCAGAGGCAGTaGGGTCTCCTCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDHCQRQ*GLLSGC
Trigger: ACACCCACTGAGGAGACCTCACTGCCTCTGGCAGTG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGGCTCCTTCAGCAGCTaGCAAGGAGTCTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDGSFSS*QGVCPK
Trigger: CTTCGGGCAGACTCCTTGTCAGCTGCTGAAGGAGCC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCACTCACGCCACTGTCTaGGACCCAGGGCCCACTCAG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPTHATV*DPGPTQ
Trigger: CTGAGTGGGCCCTGGGTCTCAGACAGTGGCGTGAGT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACAGCCATGCTGGGCGTaGGGTCAAAGTAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPQPCWA*GQSSAG
Trigger: CCCTGCGCTACTTTGACCTCACGCCCAGCATGGCTG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCTAGGAGGCTGCGCTTaGTGCAGTCTGGTGGTCGCA +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDLGGCA*CSLVVA
Trigger: TGCGACCACCAGACTGCATCAAGCGCAGCCTCCTAG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATAGTGCCGTCGAGTGCTaGGCTGCCTGCTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDSAVEC*AACCFS
Trigger: ACTGAAGCAGCAGGCAGCGCAGCACTCGACGGCACT...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGCCACCGAGTGGAACTaGCGGTCAGAGCAGTCGAAG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDATEWN*RSEQSK
Trigger: CTTCGACTGCTCTGACCGGCAGTTCCACTCGGTGGC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGAAGACGCCACACCATaGACGTGGTATCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDEDATP*TWYPGS
Trigger: GCTCCCGGGATACCACGTGCATGGTGTGGCGTCTTC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGTCAGGGCTGTGGGCTaGTCCGTCAGGGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDVRAVG*SVRVTE
Trigger: TTCAGTGACCCTGACGGAGCAGCCCACAGCCCTGAC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCTTGCACACAGGTGGTaGGACTGGCAGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDLAHRW*DWQGSC
Trigger: ACAGCTGCCCTGCCAGTCGCACCACCTGTGTGCAAG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGCAACAGCTCCAGGGTaGCCACCACCTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPATAPG*PPPGHR
Trigger: ACGATGGCCAGGTGGTGGGCACCCTGGAGCTGTTGC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTGGGGCCTGGGAGCCTaGCAAGGGGATGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSWGLGA*QGDDAE
Trigger: CTCTGCGTCATCCCCTTGCCAGGCTCCCAGGCCCCA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGCTGCTGCCACCGAGTaGAACTGCCGGTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPAAATE*NCRSEQ
Trigger: CTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGAGCCGGGGTGGGTGTaGCTCCTTCAGCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPEPGWV*LLQQLT
Trigger: TGTCAGCTGCTGAAGGAGCCACACCCACCCCGGCTC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTCCTGCAGGTTCTCTTaGAAGAAGGCTCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSCRFS*KKAPNS
Trigger: TGAATTTGGAGCCTTCTTCCAAGAGAACCTGCAGGA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCACAGGTGGTGCGACTaGCAGGGCAGCTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDHRWCD*QGSCHR
Trigger: TCTGTGACAGCTGCCCTGCCAGTCGCACCACCTGTG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCGGGCACATGCACAATaGCCACGCAGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPRAHAQ*PRSARQ
Trigger: CTGCCTGGCACTGCGTGGCCATTGTGCATGTGCCCG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCGGGAAGCCCTGTGGTaGTTGTCGTTGTGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPREALW*LSLCGA
Trigger: GGCACCGCACAACGACAACCACCACAGGGCTTCCCG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATAGGCTTGAAGGGTGCTaGCTCATTGGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDRLEGC*LIGPQA
Trigger: AGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGAGCTGTGGCGGCCTTaGGCAGTTGGGAAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSELWRP*AVGKGR
Trigger: ACGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGTGGTCGCACAAGTGTaGCAGAGGCCCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSVVAQV*QRPPAG
Trigger: CCCAGCTGGGGGCCTCTGCCACACTTGTGCGACCAC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCCTGCTGGGAAAGGTTaGCCAGGCCTCCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSPAGKG*PGLLGE
Trigger: CTCCCCCAGGAGGCCTGGCCAACCTTTCCCAGCAGG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGTCCATTTCAAACTTTaGCATAGTTGGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDVHFKL*HSWLNL
Trigger: CAGGTTCAGCCAACTATGTCAAAGTTTGAAATGGAC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGTCCATTTCAAACTTTaGCATAGTTGGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSVHFKL*HSWLNL
Trigger: CAGGTTCAGCCAACTATGTCAAAGTTTGAAATGGAC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCTGGAAGATGCTTGGTaGGTTAGTGTCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDLEDAW*VSVQPG
Trigger: GCCCGGCTGGACACTAACTCACCAAGCATCTTCCAG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACCCAGTGGCCACCACTaGAGAGCAGCTTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPPSGHH*RAAFRQ
Trigger: CTGACGGAAAGCTGCTCTTCAGTGGTGGCCACTGGG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCAGGCCCACCAGCACATaGCTGCGCTCCTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPRPTST*LRSLVT
Trigger: TGTGACCAAGGAGCGCAGTCATGTGCTGGTGGGCCT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCATGCAGGTCAGCACTCTaGCCACGTGCACTGCGATGG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPCRSAL*PRALRW
Trigger: CCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCA...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATAGCCAATGCGCTCCTTaGACACCTCCTTGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDSQCAP*TPPWPK
Trigger: CTTCGGCCAAGGAGGTGTTCAAGGAGCGCATTGGCT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAACATTGACCAGGTTCTaGCTGAAGGGTCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPTLTRF*LKGRRP
Trigger: CGGGCGCCGACCCTTCAGTCAGAACCTGGTCAATGT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTGCACCAGGCTCTCCTaGTTCACGGTGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDCTRLS*FTVWFC
Trigger: GCAGAACCACACCGTGAATCAGGAGAGCCTGGTGCA...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGCAGTGCCGTCGAGTaGTGCGCTGCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSSSAVE*CAACCF
Trigger: GAAGCAGCAGGCAGCGCAGCACTCGACGGCACTGCT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCCAGTGGGGAGCGGCTaGTTAGGTAGCCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSPVGSG*LGSLGW
Trigger: CCACCCAAGGCTACCTAAGCAGCCGCTCCCCACTGG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCGATTGTGTTGAGTTaGATGAGGTACTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDAIVLS*MRYSKL
Trigger: CAACTTTGAGTACCTCATGCAACTCAACACAATCGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCGATTGTGTTGAGTTaGATGAGGTACTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSAIVLS*MRYSKL
Trigger: CAACTTTGAGTACCTCATGCAACTCAACACAATCGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCGATTGTGTTGAGTTaGATGAGGTACTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAIVLS*MRYSKL
Trigger: CAACTTTGAGTACCTCATGCAACTCAACACAATCGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCTCTGTAGCTGGACATaGAGGGACGTGAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDLCSWT*RDVKGS
Trigger: GGAGCCCTTCACGTCCCTGCATGTCCAGCTACAGAG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGAAGACGCCACACCATaGACGTGGTATCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPEDATP*TWYPGS
Trigger: GCTCCCGGGATACCACGTGCATGGTGTGGCGTCTTC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCACTGCACCCACCAGTaGTCTCAGAGCCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPHCTHQ*SQSQWH
Trigger: GTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGTGGAGGTGGGTGCATaGTGTGGTCACCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPVEVGA*CGHPPQ
Trigger: CTGTGGAGGGTGACCACAGCATGCACCCACCTCCAC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATAGCACCAGCACTGGCTaGTCGTTGCGGATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDSTSTG*SLRIGG
Trigger: TCCACCAATCCGCAACGAGCAGCCAGTGCTGGTGCT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCCCACCAGGCCTGCTTaGACACAGGTGGTGCGACTG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSPTRPA*TQVVRL
Trigger: CAGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGTAGCCCACCAGGCCTaGTTGCACACAGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSVAHQA*LHTGGA
Trigger: CGCACCACCTGTGTGCAAGCAGGCCTGGTGGGCTAC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCGTACTCCTTCCGTGTaGACACGGCCACCACCAGGG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRTPSV*TRPPPG
Trigger: CCCTGGTGGTGGCCGTGTGCACACGGAAGGAGTACG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCTCAGGCTTGAAGGGTaGTGGCTCATTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPLRLEG*WLIGPQ
Trigger: CTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGAGAAAGGCAGCCACTaGGTTCCTCTCCATCCGGTC +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDEKGSH*VPLHPV
Trigger: GACCGGATGGAGAGGAACGCAGTGGCTGCCTTTCTC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAAGTTCAATACAACCTaGATGTCTTCCACCGAGAAG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVKFNTT*MSSTEK
Trigger: CTTCTCGGTGGAAGACATGCAGGTTGTATTGAACTT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCATCGTCACCGGTAGCTaGCAAAAAGTTCAATACAAC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVIVTGS*QKVQYN
Trigger: GTTGTATTGAACTTTTTGGCAGCTACCGGTGACGAT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGCAACAGCTCCAGGGTaGCCACCACCTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSATAPG*PPPGHR
Trigger: ACGATGGCCAGGTGGTGGGCACCCTGGAGCTGTTGC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCATGGGGCTTCCATTGGTaGGTGGTAAGGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPWGFHW*VVRRAA
Trigger: GGCTGCCCTCCTTACCACCCACCAATGGAAGCCCCA...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCCACACCGATGGGTTTaGACAGGTCCCGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDPHRWV*TGPGRQ
Trigger: CTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGTTGGTTGAGGTTCTaGAAGATGCTTGGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSWLRF*KMLGEL
Trigger: TAACTCACCAAGCATCTTCCAGAACCTCAACCAACT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGTTGGTTGAGGTTCTaGAAGATGCTTGGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSWLRF*KMLGEL
Trigger: TAACTCACCAAGCATCTTCCAGAACCTCAACCAACT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGCCACACCATGCACGTaGTATCCCGGGAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSATPCT*YPGSRR
Trigger: TCTCCGGCTCCCGGGATACCACGTGCATGGTGTGGC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCGCAATTTGTTCAAGTaGAGGATATGTAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRNLFK*RICREH
Trigger: GTGCTCTCTACATATCCTCCACTTGAACAAATTGCG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCGCAATTTGTTCAAGTaGAGGATATGTAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDRNLFK*RICREH
Trigger: GTGCTCTCTACATATCCTCCACTTGAACAAATTGCG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCGCAATTTGTTCAAGTaGAGGATATGTAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRNLFK*RICREH
Trigger: GTGCTCTCTACATATCCTCCACTTGAACAAATTGCG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTCCCCAGAGGACACCTaGGAGATTCGCCGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSSPEDT*EIRREE
Trigger: CTCCTCGCGGCGAATCTCCCAGGTGTCCTCTGGGGA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGGTGGGTGCATGCTGTaGTCACCCTCCACAGCCATG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPGGCML*SPSTAM
Trigger: CATGGCTGTGGAGGGTGACCACAGCATGCACCCACC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCTCGTTGCGGATTGGTaGAGGTGGGTGCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDLVADW*RWVHAV
Trigger: CACAGCATGCACCCACCTCCACCAATCCGCAACGAG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGGCGCAGCTCAGCTGTaGGCAGTGCTGGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSGAAQL*AVLVAT
Trigger: AGTGGCTACCAGCACTGCCCACAGCTGAGCTGCGCC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCGGGCACATGCACAATaGCCACGCAGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRAHAQ*PRSARQ
Trigger: CTGCCTGGCACTGCGTGGCCATTGTGCATGTGCCCG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACACTGTCTTGACCAGATaGCCATCTTTGAAGACATTG +
Preference number: 4 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDTVLTR*PSLKTL
Trigger: CAATGTCTTCAAAGATGGCCATCTGGTCAAGACAGT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCACTGTCTTGACCAGATaGCCATCTTTGAAGACATTG +
Preference number: 4 (lower is better)
Translates to: PGAVVSWAENQARAGSDVTVLTR*PSLKTL
Trigger: CAATGTCTTCAAAGATGGCCATCTGGTCAAGACAGT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGGTTGCAGGGCTTCATaGAAGATGGCTACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDGCRAS*KMATAP
Trigger: GGGGGCTGTAGCCATCTTCCATGAAGCCCTGCAACC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAATGATGGCAGGACCCTaGCACTGCACCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPMMAGP*HCTRLS
Trigger: GGAGAGCCTGGTGCAGTGCCAGGGTCCTGCCATCAT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGGGTGCCCACCACCTaGCCATCGTCACCGGTAGCT +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRVPTT*PSSPVA
Trigger: AGCTACCGGTGACGATGGCCAGGTGGTGGGCACCCT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGAGAGACTGGAGCTGTaGCGGCCTTGGGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSERLEL*RPWAVG
Trigger: CCCAACTGCCCAAGGCCGCCACAGCTCCAGTCTCTC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGCACATTGGAGAGACTaGAGCTGTGGCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPAHWRD*SCGGLG
Trigger: CCCAAGGCCGCCACAGCTCCAGTCTCTCCAATGTGC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGCAGAGGCCCCCAGCTaGGTAAGCACGGAGAAGACC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSAEAPS*VSTEKT
Trigger: GGTCTTCTCCGTGCTTACCCAGCTGGGGGCCTCTGC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGTTGGCCAGGCCTCCTaGGGGAGCCTCCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSVGQAS*GSLLDV
Trigger: GACATCAAGGAGGCTCCCCCAGGAGGCCTGGCCAAC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGCTATTGGCGAGATGTaGCCAGGCTCCCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPAIGEM*PGSQAI
Trigger: GATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
3UTR CAA 72 bp TGGGATTTGAAAGTAGGGATTCCCTCCCACCCCAGATaGTGCAAAATATGCAGCAGCGGCCTCAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: WDLKVGIPSHPR*CKICSSGLRGR
Trigger: TCGGCCTCTGAGGCCGCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGAACCTGCTTGTCGATaGAGTGGCGCCATTCGGCTG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPEPACR*SGAIRL
Trigger: CAGCCGAATGGCGCCACTTCATCGACAAGCAGGTTC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACCTCCGGAGGGGCACTaGTTTTGGCCTCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPPPEGH*FWPLWS
Trigger: TGACCAAAGAGGCCAAAATCAGTGCCCCTCCGGAGG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCAGCCAATGCGCTCCTTaGACACCTCCTTGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPSQCAP*TPPWPK
Trigger: CTTCGGCCAAGGAGGTGTTCAAGGAGCGCATTGGCT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCCTCCACAGCCATGTTaGGCAATTCCTGCAACAGCC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDPPQPC*AIPATA
Trigger: GGCTGTTGCAGGAATTGCTCAACATGGCTGTGGAGG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGTTCACCCTCAGGCTTaGAGGGTGCTGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPVHPQA*RVLAHW
Trigger: CCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAAC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGACATGTACTGGATGTaGCCCAGGCGCACAGCGAAG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPDMYWM*PRRTAK
Trigger: CTTCGCTGTGCGCCTGGGTCACATCCAGTACATGTC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAAAGTCACTCGTAGGCTaGCATCCCAGTGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPKSLVG*HPSGHH
Trigger: GTGGTGGCCACTGGGATGGCAGCCTACGAGTGACTT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGAAGACGCCACACCATaGACGTGGTATCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSEDATP*TWYPGS
Trigger: GCTCCCGGGATACCACGTGCATGGTGTGGCGTCTTC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGTCAGGGCTGTGGGCTaGTCCGTCAGGGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSVRAVG*SVRVTE
Trigger: TTCAGTGACCCTGACGGAGCAGCCCACAGCCCTGAC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTCCGCGCGAACTGGCTaGTGCGTACCTCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSSARTG*CVPQKA
Trigger: AGCCTTCTGAGGTACGCAGCAGCCAGTTCGCGCGGA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGCACTCACAGCCATCTaGCCATTCGCCTTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDALTAI*PFAFPP
Trigger: AGGAGGAAAGGCGAATGGGCAGATGGCTGTGAGTGC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATACACCTAGCAGTCCCTaGACAGAGCCAGCACTCACA +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDTPSSP*TEPALT
Trigger: TGTGAGTGCTGGCTCTGTGCAGGGACTGCTAGGTGT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGCACTGGCTGCTCGTTaGGGATTGGTGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSALAAR*GLVEVG
Trigger: ACCCACCTCCACCAATCCGCAACGAGCAGCCAGTGC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCTCAGGCTTGAAGGGTaGTGGCTCATTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSLRLEG*WLIGPQ
Trigger: CTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTGGGGCTTCCATTGGTaGGTGGTAAGGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSWGFHW*VVRRAA
Trigger: GGCTGCCCTCCTTACCACCCACCAATGGAAGCCCCA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCAGGTGGGGCTTCCATTaGTGGGTGGTAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPRWGFH*WVVRRA
Trigger: TGCCCTCCTTACCACCCACCAATGGAAGCCCCACCT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGGGCGCCGGAAGTCATaGCCGATGCCTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSGRRKS*PMPSSV
Trigger: AACAGAGGAAGGCATCGGCCATGACTTCCGGCGCCC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCCACACCGATGGGTTTaGACAGGTCCCGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPPHRWV*TGPGRQ
Trigger: CTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGGCTGCCATCCCAGTaGCCACCACTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRLPSQ*PPLKSS
Trigger: GCTGCTCTTCAGTGGTGGCCACTGGGATGGCAGCCT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCTCGTTGCGGATTGGTaGAGGTGGGTGCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPLVADW*RWVHAV
Trigger: CACAGCATGCACCCACCTCCACCAATCCGCAACGAG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCATCAGCACCAGCACTaGCTGCTCGTTGCGGATTGG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPHQHQH*LLVADW
Trigger: CCAATCCGCAACGAGCAGCCAGTGCTGGTGCTGATG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGGTTGCAGGGCTTCATaGAAGATGGCTACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPGCRAS*KMATAP
Trigger: GGGGGCTGTAGCCATCTTCCATGAAGCCCTGCAACC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCAAGGGGTCTTGCACTaGAGAACCCTGAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDQGVLH*RTLKQG
Trigger: ACCCTGCTTCAGGGTTCTCCAGTGCAAGACCCCTTG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCTAGCAACAAGACCCTaGAGACCACAGTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDLATRP*RPQSCS
Trigger: GCTGCACGACTGTGGTCTCCAGGGTCTTGTTGCTAG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGGCCCTGGCAGAGCTaGGGAGAGATGCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRPWQS*GEMLSS
Trigger: GGAAGAGAGCATCTCTCCCCAGCTCTGCCAGGGCCT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
3UTR CAA 72 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTaGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWD*KVGIPSHPRLC
Trigger: GCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCAGTAATAGAAGACATTaGGGGCCTCCTCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPSNRRH*GPPRPL
Trigger: CAGCGGCCGAGGAGGCCCTCAATGTCTTCTATTACT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTGTCAAGTTCAGTGCTaGTGGCCACACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDCQVQC*WPHSSL
Trigger: CAGTGAGCTGTGTGGCCATCAGCACTGAACTTGACA...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGCATCGAGGAGGAACTaGACTCCGTACTTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDASRRN*TPYFFR
Trigger: TCGGAAGAAGTACGGAGTTCAGTTCCTCCTCGATGC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCATGCACTGGAGAACCCTaGAGCAGGGTTAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPCTGEP*SRVSNS
Trigger: GCTGTTGCTAACCCTGCTTCAGGGTTCTCCAGTGCA...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGGGCAAGGGGACTCTaGAGGCAGGAAGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRARGL*RQEDVR
Trigger: TCTGACGTCTTCCTGCCTTCAGAGTCCCCTTGCCCT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGAGTGCTGCGCTGCCTaGTGCTTCAGTACAGATGCA +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPECCAA*CFSTDA
Trigger: TGCATCTGTACTGAAGCAGCAGGCAGCGCAGCACTC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACTCACAAGCTGGGCATaGTTGGGATTCACCACACCG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPLTSWA*LGFTTP
Trigger: CGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGGAACTTGTCGATTGTaGCTGCTGGGTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDGTCRL*LLGPQS
Trigger: GCTTTGAGGACCCAGCAGGCACAATCGACAAGTTCC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATAGGTCGATCCATTCGTaGAGGTGGGTGGACACATAC +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDRSIHS*RWVDTY
Trigger: GTATGTGTCCACCCACCTGCACGAATGGATCGACCT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCAGAACAAAGTCTTCTaGCACAGTCAGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDQNKVF*HSQGCG
Trigger: CCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCAGAACAAAGTCTTCTaGCACAGTCAGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDQNKVF*HSQGCG
Trigger: CCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCACTCGACCCAGAGCTTaGAGCAAGGCTAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPTRPRA*SKANSC
Trigger: GCAGCTGTTAGCCTTGCTGCAAGCTCTGGGTCGAGT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCATGGTGGTTGTCGTTGTaGGGTGCCCAGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPWWLSL*GAQQNQ
Trigger: TTGGTTCTGCTGGGCACCGCACAACGACAACCACCA...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGAGAAAGGCAGCCACTaGGTTCCTCTCCATCCGGTC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSEKGSH*VPLHPV
Trigger: GACCGGATGGAGAGGAACGCAGTGGCTGCCTTTCTC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GTTGGATATCTCTCGCTGTACCCATTTCTGGGTAAGTCCCGAGGCACGAAGCATACACTGAGGTCAGCCTaGAGGGACAGCTGTACAACA +
Preference number: 4 (lower is better)
Translates to: VGYLSLYPFLGKSRGTKHTLRSA*RDSCTT
Trigger: TGTTGTACAGCTGTCCCTCCAGGCTGACCTCAGTGT...ATGCTTCGTGCCTCGGGACTTACCCAGAAATGGGTACAGCGAGAGATATCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123996.2
CDS-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGCTGAGGTCCAAGACTaGGGACACATAGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDAEVQD*GHIVLQ
Trigger: TTGCAGGACTATGTGTCCCCAGTCTTGGACCTCAGC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGTCCCGGAAGACAGCTaGATTGCTGAGGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPVPEDS*IAEVQD
Trigger: GTCTTGGACCTCAGCAATCCAGCTGTCTTCCGGGAC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCATGACTGCGCTCCTTaGTCACAGACACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDHDCAP*SQTHCG
Trigger: TCCACAGTGTGTCTGTGACCAAGGAGCGCAGTCATG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGGGCTTCATGGAAGATaGCTACAGCCCCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSGLHGR*LQPPAH
Trigger: GTGAGCTGGGGGCTGTAGCCATCTTCCATGAAGCCC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGCGCTTGATGCAGTCTaGTGGTCGCACAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSALDAV*WSHKCG
Trigger: GCCACACTTGTGCGACCACCAGACTGCATCAAGCGC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCATGCCCAGCAGCCCACTaGCACTTACAGTCACCAACA +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPCPAAH*HLQSPT
Trigger: TGTTGGTGACTGTAAGTGCCAGTGGGCTGCTGGGCA...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGACGTACAGTGTGTATaGTCACAGTCCCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPDVQCV*SQSHPR
Trigger: CCGAGGATGGGACTGTGATCATACACACTGTACGTC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCATATGTAGAGAGCACTaGGCGGTGCCCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPICREH*AVPSRT
Trigger: TGTTCTGCTGGGCACCGCTCAGTGCTCTCTACATAT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAAGGAGAAAGGCTCACTaGGGGAGGGAAAGCGAAAAG +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPRRKAH*GRESEK
Trigger: CTTTTCGCTTTCCCTCCCTCAGTGAGCCTTTCTCCT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGAGTGCTGCGCTGCCTaGTGCTTCAGTACAGATGCA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSECCAA*CFSTDA
Trigger: TGCATCTGTACTGAAGCAGCAGGCAGCGCAGCACTC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATCCACGCGTTCCGTACTaGCGTCATAGAAATACACGT +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDPRVPY*RHRNTR
Trigger: ACGTGTATTTCTATGACGGCAGTACGGAACGCGTGG...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTGTCCGTATAAGACCTaGACAGGCTTTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPCPYKT*TGFGAS
Trigger: GCTGGCACCAAAGCCTGTGCAGGTCTTATACGGACA...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGAGAGCACTGAGCGGTaGCCAGCAGAACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPESTER*PAEQSL
Trigger: AAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCACACCTAGCAGTCCCTaGACAGAGCCAGCACTCACA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSTPSSP*TEPALT
Trigger: TGTGAGTGCTGGCTCTGTGCAGGGACTGCTAGGTGT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCTTAGGGCAGATGGTTaGAGGGCTTCATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDLRADG*RASWKM
Trigger: CATCTTCCATGAAGCCCTGCAACCATCTGCCCTAAG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGGTAACCGCTCATTCTaGTGCAGTCTTCGCAAGATC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDGNRSF*CSLRKI
Trigger: GATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATGGCGATCAAGCAGGTTaGACACACCTTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDGDQAG*THLQRA
Trigger: AGCTCTTTGAAGGTGTGTGCAACCTGCTTGATCGCC...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGGCGATCAAGCAGGTTaGACACACCTTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDGDQAG*THLQRA
Trigger: AGCTCTTTGAAGGTGTGTGCAACCTGCTTGATCGCC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTGCTTGTCGATGAAGTaGCGCCATTCGGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSCLSMK*RHSAVA
Trigger: TGCCACAGCCGAATGGCGCCACTTCATCGACAAGCA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTTAGGTAGCCTTGGGTaGGTGGCCTTAGGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSLGSLG*VALGAE
Trigger: TTCTGCGCCTAAGGCCACCCACCCAAGGCTACCTAA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGCTGAGGTCCAAGACTaGGGACACATAGTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPAEVQD*GHIVLQ
Trigger: TTGCAGGACTATGTGTCCCCAGTCTTGGACCTCAGC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGATTCACCACACCGATaGGTTTGGACAGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSDSPHR*VWTGPG
Trigger: TCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTTCTCGTTGGTCAACTaGAGGCAGCCCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPFSLVN*RQPRSK
Trigger: CTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAA...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCATGGCACCAAAGAGGTaGATGAGCCGCAACAGCAAC +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPMAPKR*MSRNSN
Trigger: GTTGCTGTTGCGGCTCATCCACCTCTTTGGTGCCAT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAATGGCATCGGTGTCCTaGTCAAGCACCTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPMASVS*SSTFWT
Trigger: TGTCCAGAAGGTGCTTGACCAGGACACCGATGCCAT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACTTGATGCAGTCTGGTaGTCGCACAAGTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPLDAVW*SHKCGR
Trigger: TCTGCCACACTTGTGCGACCACCAGACTGCATCAAG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGTTGGACTGGTCAATaGAGAAGAGTTCGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSSWTGQ*RRVRAP
Trigger: CGGCGCTCGAACTCTTCTTCATTGACCAGTCCAACT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTGTCAAGTTCAGTGCTaGTGGCCACACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSCQVQC*WPHSSL
Trigger: CAGTGAGCTGTGTGGCCATCAGCACTGAACTTGACA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGGAGAAAGGCTCACTaGGGGAGGGAAAGCGAAAAG +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRRKAH*GRESEK
Trigger: CTTTTCGCTTTCCCTCCCTCAGTGAGCCTTTCTCCT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCTTGTCGATTGTGCCTaGTGGGTCCTCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSLVDCA*WVLKAL
Trigger: GAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTGTCCGTATAAGACCTaGACAGGCTTTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSCPYKT*TGFGAS
Trigger: GCTGGCACCAAAGCCTGTGCAGGTCTTATACGGACA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGAGAGCACTGAGCGGTaGCCAGCAGAACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSESTER*PAEQSL
Trigger: AAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCCACAACGATCAATTTaGCATCTTCCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPPQRSI*HLPGPP
Trigger: TGGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATAACCGCTCATTCTGCTaGAGTCTTCGCAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDNRSFC*SLRKIL
Trigger: CAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTT...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCCTGACATGAGGTCATaGCTCTTAGCATATGTGTCC +
Preference number: 4 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDPDMRS*LLAYVS
Trigger: GGACACATATGCTAAGAGCCATGACCTCATGTCAGG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCTTTGTACAACAATCTaGCCTTCAGCCCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPLCTTI*PSAPSA
Trigger: AGCACTGGGGGCTGAAGGCCAGATTGTTGTACAAAG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCATGACTGCGCTCCTTaGTCACAGACACACTGTGGA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSHDCAP*SQTHCG
Trigger: TCCACAGTGTGTCTGTGACCAAGGAGCGCAGTCATG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCATGGCATCGGTGTCCTaGTCAAGCACCTTCTGGACA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSMASVS*SSTFWT
Trigger: TGTCCAGAAGGTGCTTGACCAGGACACCGATGCCAT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR TCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACAACCTCCCATTCACTaGATACAGGTGCAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPQPPIH*IQVQGV
Trigger: TACTCCTTGCACCTGTATTCAGTGAATGGGAGGTTG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCCCACAACGATCAATTTaGCATCTTCCAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSPQRSI*HLPGPP
Trigger: TGGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGG...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGTGTTGAGTTGCATGAGGTACTCAAAGTTGGATATCTCTCGCTGTACCCATTTACCTGGTTCCGTAGCTaGGTGTGGGATGGGATAGGG +
Preference number: 4 (lower is better)
Translates to: CVELHEVLKVGYLSLYPFTWFRS*VWDGIG
Trigger: CCCTATCCCATCCCACACCCAGCTACGGAACCAGGT...AAATGGGTACAGCGAGAGATATCCAACTTTGAGTACCTCATGCAACTCAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123996.2
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGTCGATTGTGCCTGCTaGGTCCTCAAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSVDCAC*VLKALI
Trigger: TATGAGAGCTTTGAGGACCCAGCAGGCACAATCGAC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAAGGTCAAAGCCATTCTaGTTCTCCAGGAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPRSKPF*FSRKSG
Trigger: TCCTGACTTCCTGGAGAACCAGAATGGCTTTGACCT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTCTGACTCCAGAGCCTaGCGGTGTTTCTGGATGAAA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSSDSRA*RCFWMK
Trigger: TTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCATTCGTGCAGGTGGGTaGACACATACTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSIRAGG*THTLTP
Trigger: TGGAGTCAGAGTATGTGTCCACCCACCTGCACGAAT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR TCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGTCCATTTCAAACTTTaGCATAGTTGGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDVHFKL*HSWLNL
Trigger: CAGGTTCAGCCAACTATGTCAAAGTTTGAAATGGAC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp TGTGTTGAGTTGCATGAGGTACTCAAAGTTGGATATCTCTCGCTGTACCCATTTCAGCCGAACGACGTCTaGCTGTCCGTAGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: CVELHEVLKVGYLSLYPFQPNDV*LSVDEV
Trigger: TACCTCATCTACGGACAGCCAGACGTCGTTCGGCTG...AAATGGGTACAGCGAGAGATATCCAACTTTGAGTACCTCATGCAACTCAACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123996.2
CDS-3UTR CCA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATACTGTCTTGACCAGATaGCCATCTTTGAAGACATTG +
Preference number: 4 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDTVLTR*PSLKTL
Trigger: CAATGTCTTCAAAGATGGCCATCTGGTCAAGACAGT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR GCA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAATCGTCACCGGTAGCTaGCAAAAAGTTCAATACAAC +
Preference number: 4 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPIVTGS*QKVQYN
Trigger: GTTGTATTGAACTTTTTGGCAGCTACCGGTGACGAT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTCCTGCAGGTTCTCTTaGAAGAAGGCTCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSSCRFS*KKAPNS
Trigger: TGAATTTGGAGCCTTCTTCCAAGAGAACCTGCAGGA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR GCA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCATCGTCACCGGTAGCTaGCAAAAAGTTCAATACAAC +
Preference number: 4 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSIVTGS*QKVQYN
Trigger: GTTGTATTGAACTTTTTGGCAGCTACCGGTGACGAT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGCGGCCTTGGGCAGTaGGGAAGGGCCGTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAGGLGQ*GRAVAH
Trigger: ATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGCC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCTGTGGCGGCCTaGGGCAGTTGGGAAGGGCCG +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAGAVAA*GSWEGP
Trigger: CGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTCC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCCGAACGCCGCAGGTaGAAACGCCGCAGGTGGACC +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAAERRR*KRRRWT
Trigger: GGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGCCGAACGCCGCAGGTaGAAACGCCGCAGGTGGACC +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGAERRR*KRRRWT
Trigger: GGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGGC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAGCCGGGCGAGGCGATaGGCTGCTTCCTCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGASRARR*AASSAE
Trigger: CTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGCT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGAGCCACCAGAGGCGTaGTGCCAGGAAGAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGEPPEA*CQEEAQ
Trigger: CTGCGCCTCTTCCTGGCACAACGCCTCTGGTGGCTC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGAGCCACCAGAGGCGTaGTGCCAGGAAGAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDEPPEA*CQEEAQ
Trigger: CTGCGCCTCTTCCTGGCACAACGCCTCTGGTGGCTC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCGGTCCTCTGAGGACTaGCCCAGGGGGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDRSSED*PRGRSR
Trigger: CCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACCG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCTGCTCGTTGCGGATaGGTGGAGGTGGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAAARCG*VEVGAC
Trigger: GCATGCACCCACCTCCACCAATCCGCAACGAGCAGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGAAGCCCTGTGGTGGTaGTCGTTGTGCGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGEALWW*SLCGAQ
Trigger: CTGGGCACCGCACAACGACAACCACCACAGGGCTTC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAAGGGTGCTGGCTCATaGGGCCCCAGGCTACACAGG +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDKGAGS*GPRLHR
Trigger: CCTGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGGAGTAACAGTCCCATaGCTGCTGCCGCCACCAGCG +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGGVTVP*LLPPPA
Trigger: CGCTGGTGGCGGCAGCAGCAATGGGACTGTTACTCC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp CTCCTTCACGTCGGCGGGGCTCTCCAGCCGTGCCTGCCAGGCTGCTaGCACCGAGTGGAACTGCCGGTCAGAGCAGTCGAAGCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: LLHVGGALQPCLPGC*HRVELPVRAVEAAA
Trigger: AGCGGCCGCTTCGACTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAGCCCCGCCGACGTGAAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GAGCTCCTTCACGTCGGCGGGGCTCTCCAGCCGTGCCTGCCAGGCTaGTGCCACCGAGTGGAACTGCCGGTCAGAGCAGTCGAAGCGGCC +
Preference number: 5 (lower is better)
Translates to: ELLHVGGALQPCLPG*CHRVELPVRAVEAA
Trigger: GGCCGCTTCGACTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAGCCCCGCCGACGTGAAGGAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGTCCTTGAACACCTCCTaGGCCGAAGGGGAGCCACTC +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGASLNTS*AEGEPL
Trigger: GAGTGGCTCCCCTTCGGCCAAGGAGGTGTTCAAGGA...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTCCTTGAACACCTCCTaGGCCGAAGGGGAGCCACTC +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDSLNTS*AEGEPL
Trigger: GAGTGGCTCCCCTTCGGCCAAGGAGGTGTTCAAGGA...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCTGTGGTGGTTGTCGTaGTGCGGTGCCCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDLWWLS*CGAQQN
Trigger: GTTCTGCTGGGCACCGCACAACGACAACCACCACAG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GCGCAGGGCACGTGCAGGACCCCGGTGCCGGGCCATGCCCGACAGTaGCCGGATGACGGCGCCTGCATGGCGAGCCTTCTGAGATTCATT +
Preference number: 5 (lower is better)
Translates to: AQGTCRTPVPGHARQ*PDDGACMASLLRFI
Trigger: AATGAATCTCAGAAGGCTCGCCATGCAGGCGCCGTCATCCGGGCACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACGTGCCCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GATGCCAGCCATGCTGGGCGTGAGGTCAAAGTAGCGCAGGGCACGTaGAGGACCCCGGTGCCGGGCCATGCCCGACAGTGCCCGGATGAC +
Preference number: 5 (lower is better)
Translates to: DASHAGREVKVAQGT*RTPVPGHARQCPDD
Trigger: GTCATCCGGGCACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACGTGCCCTGCGCTACTTTGACCTCACGCCCAGCATGGCTGGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACACCACACCGATGGGTTaGGACAGGTCCCGGAAGACA +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDTTPMG*DRSRKT
Trigger: TGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGGGGTTTGCTGGGGGTaGCTCGTGTTCGAGGTATCA +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGGVCWG*LVFEVS
Trigger: TGATACCTCGAACACGAGCAACCCCCAGCAAACCCC...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACCTCCTCTTCAGGGGTTaGCTGGGGGTTGCTCGTGTT +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDLLFRG*LGVARV
Trigger: AACACGAGCAACCCCCAGCAAACCCCTGAAGAGGAG...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTCCTCTTCAGGGGTTaGCTGGGGGTTGCTCGTGTT +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGLLFRG*LGVARV
Trigger: AACACGAGCAACCCCCAGCAAACCCCTGAAGAGGAG...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GCCCCCACTGCAGTCCCAGGGGCCCATATGCACGGTCCAGCAGCGTaGGGACCAGTGGCACCAACCACGAACAGCGCTCAGAGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: APTAVPGAHMHGPAA*GPVAPTTNSAQRLP
Trigger: TGGCAGCCTCTGAGCGCTGTTCGTGGTTGGTGCCACTGGTCCGCACGCTGCTGGACCGTGCATATGGGCCCCTGGGACTGCAGTGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp TCCGGAATGAGCTCCTTCACGTCGGCGGGGCTCTCCAGCCGTGCCTaGCAGGCTGCTGCCACCGAGTGGAACTGCCGGTCAGAGCAGTCG +
Preference number: 5 (lower is better)
Translates to: SGMSSFTSAGLSSRA*QAAATEWNCRSEQS
Trigger: CGACTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAGCCCCGCCGACGTGAAGGAGCTCATTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GGTCCTACGAGGTCGTGTGTTTCACACGGGCCGGCCTCGGCCTCCTaGGGCTGCACAGCCACTCGCTCCAGCAAGGGCAGCAGAACACCC +
Preference number: 5 (lower is better)
Translates to: GPTRSCVSHGPASAS*GCTATRSSKGSRTP
Trigger: GGGTGTTCTGCTGCCCTTGCTGGAGCGAGTGGCTGTGCAGCCCCAGGAGGCCGAGGCCGGCCCGTGTGAAACACACGACCTCGTAGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGGAGTCTGCCCGAAGTaGCTGATGATGCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDGVCPK*LMMPSR
Trigger: TCTGGAAGGCATCATCAGCAACTTCGGGCAGACTCC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGCCCACAACGATCAATTaGCCATCTTCCAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAPTTIN*PSSRPT
Trigger: GGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGGG...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGCGGCCGGAGGGAACTaGTATTTGCTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAAAGGN*YLLFSL
Trigger: CAAGGAGAAGAGCAAATACAAGTTCCCTCCGGCCGC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GGGTGGTGCTCGGCTAGCATGCAGAACGTGCACTGCACCCACCAGTaGTCTCAGAGCCAGTGGCACCTGCTGGGGGTCCTGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GWCSASMQNVHCTHQ*SQSQWHLLGVLSRA
Trigger: GGCCCTGCTCAGGACCCCCAGCAGGTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp ATGCTCAGTCTCGGAAGACGAGGTGGTCAGCGCCCGACTGAGCGCTaGCTCCAGCTTGGAGAGCACGTAGCACGCCTCCTCCCGGCGGGT +
Preference number: 5 (lower is better)
Translates to: MLSLGRRGGQRPTER*LQLGEHVARLLPAG
Trigger: ACCCGCCGGGAGGAGGCGTGCTACGTGCTCTCCAAGCTGGAGGCAGCGCTCAGTCGGGCGCTGACCACCTCGTCTTCCGAGACTGAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GCCGAACGCCGCAGGTTGAAACGCCGCAGGTGGACCTCACGCAGCTaGGCCAAGGGGCGCCGGAAGTCATGGCCGATGCCTTCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: AERRRLKRRRWTSRS*AKGRRKSWPMPSSV
Trigger: AACAGAGGAAGGCATCGGCCATGACTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp AAGAAGAGTTCGAGCGCCGAACGCCGCAGGTTGAAACGCCGCAGGTaGACCTCACGCAGCTGGGCCAAGGGGCGCCGGAAGTCATGGCCG +
Preference number: 5 (lower is better)
Translates to: KKSSSAERRRLKRRR*TSRSWAKGRRKSWP
Trigger: CGGCCATGACTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGGCGCTCGAACTCTTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp TTCCAGCACATTGGAGAGACTGGAGCTGTGGCGGCCTTGGGCAGTTaGGAAGGGCCGTGGCCCATCCAGCGGGGAGGGTGTGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FQHIGETGAVAALGS*EGPWPIQRGGCARL
Trigger: CAGCCTGGCACACCCTCCCCGCTGGATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTCCAGTCTCTCCAATGTGCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTCACCCACCTTCTCGTaGGTCAACTGGAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SEADARSPLSRRGAGLPGSPTFS*VNWRQP
Trigger: GGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTCCTTGAACACCTCCTaGGCCGAAGGGGAGCCACTC +
Preference number: 5 (lower is better)
Translates to: SEADARSPLSRRGAGLPGSLNTS*AEGEPL
Trigger: GAGTGGCTCCCCTTCGGCCAAGGAGGTGTTCAAGGA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACGAGATTCATTTCCACTaGACTCTGAGTCCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDEIHFH*TLSPAP
Trigger: CGGGGCTGGACTCAGAGTCAAGTGGAAATGAATCTC...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGAGATTCATTTCCACTaGACTCTGAGTCCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAEIHFH*TLSPAP
Trigger: CGGGGCTGGACTCAGAGTCAAGTGGAAATGAATCTC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGGCGGCCTTGGGCAGTaGGGAAGGGCCGTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSGGLGQ*GRAVAH
Trigger: ATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGCC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGAGCTGTGGCGGCCTaGGGCAGTTGGGAAGGGCCG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGAVAA*GSWEGP
Trigger: CGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp CACGTGCAGGACCCCGGTGCCGGGCCATGCCCGACAGTGCCCGGATaGCGGCGCCTGCATGGCGAGCCTTCTGAGATTCATTTCCACTTG +
Preference number: 5 (lower is better)
Translates to: HVQDPGAGPCPTVPG*RRLHGEPSEIHFHL
Trigger: CAAGTGGAAATGAATCTCAGAAGGCTCGCCATGCAGGCGCCGTCATCCGGGCACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GGGAGATTCGCCGCGAGGAGCGCCACAGCCTCCGCGCGAACTGGCTaGTGCGTACCTCAGAAGGCTGCCCAGCGCCCACAACGATCAATT +
Preference number: 5 (lower is better)
Translates to: GRFAARSATASARTG*CVPQKAAQRPQRSI
Trigger: AATTGATCGTTGTGGGCGCTGGGCAGCCTTCTGAGGTACGCAGCAGCCAGTTCGCGCGGAGGCTGTGGCGCTCCTCGCGGCGAATCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp AGGCGACGCAGCTCCAAGGGCCGTAGTGACACTCGACCCAGAGCTTaGAGCAAGGCTAACAGCTGCTCCTGGCAGCGGGCTCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RRRSSKGRSDTRPRA*SKANSCSWQRAPRA
Trigger: AGCCCTGGGAGCCCGCTGCCAGGAGCAGCTGTTAGCCTTGCTGCAAGCTCTGGGTCGAGTGTCACTACGGCCCTTGGAGCTGCGTCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp CAGCTTGGAGAGCACGTAGCACGCCTCCTCCCGGCGGGTCGGCACTaGGGTCTGCAGCAGTGTGTGCAGCTTCACATAGGCCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: QLGEHVARLLPAGRH*GLQQCVQLHIGLGM
Trigger: CATGCCCAGGCCTATGTGAAGCTGCACACACTGCTGCAGACCGCAGTGCCGACCCGCCGGGAGGAGGCGTGCTACGTGCTCTCCAAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp CGCAGGTGGACCTCACGCAGCTGGGCCAAGGGGCGCCGGAAGTCATaGCCGATGCCTTCCTCTGTTTCCACGCGTTCCGTACTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: RRWTSRSWAKGRRKS*PMPSSVSTRSVLPS
Trigger: TGACGGCAGTACGGAACGCGTGGAAACAGAGGAAGGCATCGGCCATGACTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCACCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp CAGCGAGCCTCGCCAGGATTGTATTCAGTCTCCCCAGAGGACACCTaGGAGATTCGCCGCGAGGAGCGCCACAGCCTCCGCGCGAACTGG +
Preference number: 5 (lower is better)
Translates to: QRASPGLYSVSPEDT*EIRREERHSLRANW
Trigger: CCAGTTCGCGCGGAGGCTGTGGCGCTCCTCGCGGCGAATCTCCCAGGTGTCCTCTGGGGAGACTGAATACAATCCTGGCGAGGCTCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCCGAACGCCGCAGGTaGAAACGCCGCAGGTGGACC +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAERRR*KRRRWT
Trigger: GGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGCCGGGCGAGGCGATaGGCTGCTTCCTCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSRARR*AASSAE
Trigger: CTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAGCCGGGCGAGGCGATaGGCTGCTTCCTCAGCCGAG +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSRARR*AASSAE
Trigger: CTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGCT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAGGGAACTTGTATTaGCTCTTCTCCTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAGGNLY*LFSLEL
Trigger: CAGCTCCAAGGAGAAGAGCAAATACAAGTTCCCTCC...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGGGTTTGCTGGGGGTaGCTCGTGTTCGAGGTATCA +
Preference number: 5 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGVCWG*LVFEVS
Trigger: TGATACCTCGAACACGAGCAACCCCCAGCAAACCCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGCCTGCTGGGAAAGGTaGGCCAGGCCTCCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDACWER*ARPPGG
Trigger: TCCCCCAGGAGGCCTGGCCAACCTTTCCCAGCAGGC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCCTGCTGGGAAAGGTaGGCCAGGCCTCCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRACWER*ARPPGG
Trigger: TCCCCCAGGAGGCCTGGCCAACCTTTCCCAGCAGGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGCCTGCTGGGAAAGGTaGGCCAGGCCTCCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSACWER*ARPPGG
Trigger: TCCCCCAGGAGGCCTGGCCAACCTTTCCCAGCAGGC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp CTGTCTGTGGCAGCCTCGAGGACATACAGCCGCGTCAGCACATCCTaGCAGCCAGCTTGTCGGGCCAGCAGCCGAACGACGTCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: LSVAASRTYSRVSTS*QPACRASSRTTSGC
Trigger: ACAGCCAGACGTCGTTCGGCTGCTGGCCCGACAAGCTGGCTGGCAGGATGTGCTGACGCGGCTGTATGTCCTCGAGGCTGCCACAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000123996.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GAGCAGTGCCGTCGAGTGCTGCGCTGCCTGCTGCTTCAGTACAGATaGATAGCGCAATCCCTCCACGCGAGCCCTGCGCTGGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: EQCRRVLRCLLLQYR*IAQSLHASPALGRF
Trigger: GAACCTGCCCAGCGCAGGGCTCGCGTGGAGGGATTGCGCTATGCATCTGTACTGAAGCAGCAGGCAGCGCAGCACTCGACGGCACTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp AGATTCGCCGCGAGGAGCGCCACAGCCTCCGCGCGAACTGGCTGCTaGGTACCTCAGAAGGCTGCCCAGCGCCCACAACGATCAATTTGC +
Preference number: 5 (lower is better)
Translates to: RFAARSATASARTGC*VPQKAAQRPQRSIC
Trigger: GCAAATTGATCGTTGTGGGCGCTGGGCAGCCTTCTGAGGTACGCAGCAGCCAGTTCGCGCGGAGGCTGTGGCGCTCCTCGCGGCGAATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp TTCTGGTCCTCGGGGTGGTGCTCGGCTAGCATGCAGAACGTGCACTaGACCCACCAGTGCTCTCAGAGCCAGTGGCACCTGCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: FWSSGWCSASMQNVH*THQCSQSQWHLLGV
Trigger: GACCCCCAGCAGGTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp CGCAGTTCTGGTCCTCGGGGTGGTGCTCGGCTAGCATGCAGAACGTaGACTGCACCCACCAGTGCTCTCAGAGCCAGTGGCACCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RSSGPRGGARLACRT*TAPTSALRASGTCW
Trigger: CCAGCAGGTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAACTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GCTGAGGTAGGAACCGCCTCTGACGATTGTAGACACAGCCAGGCATaGAAGGTAAAGCCGGCTCCTGGCCACCGCTGCACGGGCGGCACC +
Preference number: 5 (lower is better)
Translates to: AEVGTASDDCRHSQA*KVKPAPGHRCTGGT
Trigger: GGTGCCGCCCGTGCAGCGGTGGCCAGGAGCCGGCTTTACCTTCCATGCCTGGCTGTGTCTACAATCGTCAGAGGCGGTTCCTACCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACATCCTGCCAGCCAGCTaGTCGGGCCAGCAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDILPAS*SGQQPN
Trigger: GTTCGGCTGCTGGCCCGACAAGCTGGCTGGCAGGAT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGAGTCTGCCCGAAGTaGCTGATGATGCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGVCPK*LMMPSR
Trigger: TCTGGAAGGCATCATCAGCAACTTCGGGCAGACTCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGAAGGCCTTGAGTTGGTaGAGGTTCTGGAAGATGCTT +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAKALSW*RFWKML
Trigger: AAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTT...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACAAGGCCTTGAGTTGGTaGAGGTTCTGGAAGATGCTT +
Preference number: 5 (lower is better)
Translates to: QRPQRPTLGLPSAGEGRDKALSW*RFWKML
Trigger: AAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTT...GTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGATATTTGCTCTTCTCCTaGGAGCTGATGACTTCCCCA +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGYLLFS*ELMTSP
Trigger: TGGGGAAGTCATCAGCTCCAAGGAGAAGAGCAAATA...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGAGCCACCAGAGGCGTaGTGCCAGGAAGAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSREPPEA*CQEEAQ
Trigger: CTGCGCCTCTTCCTGGCACAACGCCTCTGGTGGCTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCCCACCAGGCCTGCTaGCACACAGGTGGTGCGACT +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAHQAC*HTGGAT
Trigger: AGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCCCACCAGGCCTGCTaGCACACAGGTGGTGCGACT +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAHQAC*HTGGAT
Trigger: AGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAACCAGATGGCCATCTTaGAAGACATTGACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGTRWPS*KTLTRF
Trigger: GAACCTGGTCAATGTCTTCAAAGATGGCCATCTGGT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCGGTCCTCTGAGGACTaGCCCAGGGGGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRSSED*PRGRSR
Trigger: CCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACCG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp GGGTGGACACATACTCTGACTCCAGAGCCTGGCGGTGTTTCTGGATaGAATCCTCGGGGCTGCCGGCCCACGGGGGCAGCACCACATCAC +
Preference number: 5 (lower is better)
Translates to: GWTHTLTPEPGGVSG*NPRGCRPTGAAPHH
Trigger: GTGATGTGGTGCTGCCCCCGTGGGCCGGCAGCCCCGAGGATTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGAGTATGTGTCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp TCCATCCGGTCCTCTGAGGACTTGCCCAGGGGGAGAAGCAGGCCCTaGGTGTTGCGGCCTGAGGTCAGCTCAGGTCCTACGAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: SIRSSEDLPRGRSRP*VLRPEVSSGPTRSC
Trigger: ACACGACCTCGTAGGACCTGAGCTGACCTCAGGCCGCAACACTCAGGGCCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACCGGATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp CATCAGGAGAAAGGCAGCCACTGCGTTCCTCTCCATCCGGTCCTCTaGGGACTTGCCCAGGGGGAGAAGCAGGCCCTGAGTGTTGCGGCC +
Preference number: 5 (lower is better)
Translates to: HQEKGSHCVPLHPVL*GLAQGEKQALSVAA
Trigger: GGCCGCAACACTCAGGGCCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACCGGATGGAGAGGAACGCAGTGGCTGCCTTTCTCCTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp AGCAGGGTACGCAGTTCTGGTCCTCGGGGTGGTGCTCGGCTAGCATaGAGAACGTGCACTGCACCCACCAGTGCTCTCAGAGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SRVRSSGPRGGARLA*RTCTAPTSALRASG
Trigger: GCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAACTGCGTACCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GCCAGGAAGAGGCGCAGCTCAGCTGTGGGCAGTGCTGGTAGCCACTaGATCAGCACCAGCACTGGCTGCTCGTTGCGGATTGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: ARKRRSSAVGSAGSH*ISTSTGCSLRIGGG
Trigger: ACCTCCACCAATCCGCAACGAGCAGCCAGTGCTGGTGCTGATGCAGTGGCTACCAGCACTGCCCACAGCTGAGCTGCGCCTCTTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GGCCGTAGTGACACTCGACCCAGAGCTTGCAGCAAGGCTAACAGCTaGTCCTGGCAGCGGGCTCCCAGGGCTGTCCCCGTGTTAAGTGTC +
Preference number: 5 (lower is better)
Translates to: GRSDTRPRACSKANS*SWQRAPRAVPVLSV
Trigger: GACACTTAACACGGGGACAGCCCTGGGAGCCCGCTGCCAGGAGCAGCTGTTAGCCTTGCTGCAAGCTCTGGGTCGAGTGTCACTACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GAAAGGCAGCCACTGCGTTCCTCTCCATCCGGTCCTCTGAGGACTTaGCCAGGGGGAGAAGCAGGCCCTGAGTGTTGCGGCCTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: ERQPLRSSPSGPLRT*PGGEAGPECCGLRS
Trigger: TGACCTCAGGCCGCAACACTCAGGGCCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACCGGATGGAGAGGAACGCAGTGGCTGCCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GGCTGCCGGCCCACGGGGGCAGCACCACATCACCCACCTTCTCGTTaGTCAACTGGAGGCAGCCCAGGTCAAAGCCATTCTGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GCRPTGAAPHHPPSR*STGGSPGQSHSGSP
Trigger: TGGAGAACCAGAATGGCTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGATGTGGTGCTGCCCCCGTGGGCCGGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp AGGTGGGTGGACACATACTCTGACTCCAGAGCCTGGCGGTGTTTCTaGATGAAATCCTCGGGGCTGCCGGCCCACGGGGGCAGCACCACA +
Preference number: 5 (lower is better)
Translates to: RWVDTYSDSRAWRCF*MKSSGLPAHGGSTT
Trigger: TGTGGTGCTGCCCCCGTGGGCCGGCAGCCCCGAGGATTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGAGTATGTGTCCACCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp CTAACAGGTAGCCCACCAGGCCTGCTTGCACACAGGTGGTGCGACTaGCAGGGCAGCTGTCACAGAGCCACCAGAGGCGTTGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LTGSPPGLLAHRWCD*QGSCHRATRGVVPG
Trigger: TCCTGGCACAACGCCTCTGGTGGCTCTGTGACAGCTGCCCTGCCAGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGGCTACCTGTTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp AGGAGGGGCCCACCGCCATCAGCAGCCGCCTGCTCCATCAGCAGCTaGGCAGACATGAGCACATTCATATCCATGGCCGAACTGGGGACC +
Preference number: 5 (lower is better)
Translates to: RRGPPPSAAACSISS*ADMSTFISMAELGT
Trigger: GGTCCCCAGTTCGGCCATGGATATGAATGTGCTCATGTCTGCCCAGCTGCTGATGGAGCAGGCGGCTGCTGATGGCGGTGGGCCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTAGTGGAACTTGTCGATaGTGCCTGCTGGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: SEADARSPLSRRGAGLPGSGTCR*CLLGPQ
Trigger: TTGAGGACCCAGCAGGCACAATCGACAAGTTCCACT...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGTTCACAAGCAGAGCTTaGTACAACAATCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: AAAASEADARSPLSRRGAFTSRA*YNNLAF
Trigger: GAAGGCCAGATTGTTGTACAAAGCTCTGCTTGTGAA...CGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GCAGCGGCCTCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGAAGATGCTCAAAGCAATaGTTGCTAAGGAAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: AAASEADARSPLSRRGAGRCSKQ*LLRKVA
Trigger: AGCCACCTTCCTTAGCAACAATTGCTTTGAGCATCT...TCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGAGGCCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGAGATTCATTTCCACTaGACTCTGAGTCCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: SEADARSPLSRRGAGLPGEIHFH*TLSPAP
Trigger: CGGGGCTGGACTCAGAGTCAAGTGGAAATGAATCTC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACGAAGCCCTGTGGTGGTaGTCGTTGTGCGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDEALWW*SLCGAQ
Trigger: CTGGGCACCGCACAACGACAACCACCACAGGGCTTC...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGAAGCCCTGTGGTGGTaGTCGTTGTGCGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSEALWW*SLCGAQ
Trigger: CTGGGCACCGCACAACGACAACCACCACAGGGCTTC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGAAGCCCTGTGGTGGTaGTCGTTGTGCGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSREALWW*SLCGAQ
Trigger: CTGGGCACCGCACAACGACAACCACCACAGGGCTTC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAAGGGTGCTGGCTCATaGGGCCCCAGGCTACACAGG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVKGAGS*GPRLHR
Trigger: CCTGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAAGGGTGCTGGCTCATaGGGCCCCAGGCTACACAGG +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRKGAGS*GPRLHR
Trigger: CCTGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGAGTAACAGTCCCATaGCTGCTGCCGCCACCAGCG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGVTVP*LLPPPA
Trigger: CGCTGGTGGCGGCAGCAGCAATGGGACTGTTACTCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp GGATGGGATAGGGTAGAGCTGGGGCCTGGGAGCCTGGCAAGGGGATaGCGCAGAGGACGCGGCCACCTTGTGTGGGAAGTTGAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: GWDRVELGPGSLARG*RRGRGHLVWEVEEV
Trigger: TACTTCCTCAACTTCCCACACAAGGTGGCCGCGTCCTCTGCGTCATCCCCTTGCCAGGCTCCCAGGCCCCAGCTCTACCCTATCCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GTGTCTCTAACAGGTAGCCCACCAGGCCTGCTTGCACACAGGTGGTaGGACTGGCAGGGCAGCTGTCACAGAGCCACCAGAGGCGTTGTG +
Preference number: 5 (lower is better)
Translates to: VSLTGSPPGLLAHRW*DWQGSCHRATRGVV
Trigger: CACAACGCCTCTGGTGGCTCTGTGACAGCTGCCCTGCCAGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGGCTACCTGTTAGAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GGGGCTGCACAGCCACTCGCTCCAGCAAGGGCAGCAGAACACCCATaGCCCCTACGCAGTTCACCACATCCTTCACGTCCCATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GAAQPLAPARAAEHP*PLRSSPHPSRPMSP
Trigger: TGGAGACATGGGACGTGAAGGATGTGGTGAACTGCGTAGGGGGCATGGGTGTTCTGCTGCCCTTGCTGGAGCGAGTGGCTGTGCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GGTCCTCTGAGGACTTGCCCAGGGGGAGAAGCAGGCCCTGAGTGTTaGGGCCTGAGGTCAGCTCAGGTCCTACGAGGTCGTGTGTTTCAC +
Preference number: 5 (lower is better)
Translates to: GPLRTCPGGEAGPEC*GLRSAQVLRGRVFH
Trigger: GTGAAACACACGACCTCGTAGGACCTGAGCTGACCTCAGGCCGCAACACTCAGGGCCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp AAGAGATCGGCAGCTCTGGGAGGAAGCGTGGGGGACTACTGTCTGTaGCAGCCTCGAGGACATACAGCCGCGTCAGCACATCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: KRSAALGGSVGDYCL*QPRGHTAASAHPAS
Trigger: GCTGGCAGGATGTGCTGACGCGGCTGTATGTCCTCGAGGCTGCCACAGACAGTAGTCCCCCACGCTTCCTCCCAGAGCTGCCGATCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAAGGTGGGGCTTCCATaGGTGGGTGGTAAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRKVGLP*VGGKEG
Trigger: GCCCTCCTTACCACCCACCAATGGAAGCCCCACCTT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGAGGACGCGGCCACCTaGTGTGGGAAGTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSEDAAT*CGKLRK
Trigger: CTTCCTCAACTTCCCACACAAGGTGGCCGCGTCCTC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGAGGACGCGGCCACCTaGTGTGGGAAGTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVEDAAT*CGKLRK
Trigger: CTTCCTCAACTTCCCACACAAGGTGGCCGCGTCCTC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTCACCCACCTTCTCGTaGGTCAACTGGAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSPTFS*VNWRQP
Trigger: GGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTCACCCACCTTCTCGTaGGTCAACTGGAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSSPTFS*VNWRQP
Trigger: GGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTGGAGGGAACTTGTATTaGCTCTTCTCCTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: SEADARSPLSRRGAGLPGGGNLY*LFSLEL
Trigger: CAGCTCCAAGGAGAAGAGCAAATACAAGTTCCCTCC...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTGTGGTGGTTGTCGTaGTGCGGTGCCCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLWWLS*CGAQQN
Trigger: GTTCTGCTGGGCACCGCACAACGACAACCACCACAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCTGTGGTGGTTGTCGTaGTGCGGTGCCCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSLWWLS*CGAQQN
Trigger: GTTCTGCTGGGCACCGCACAACGACAACCACCACAG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTCTAGGAGGCTGCGCTaGATGCAGTCTGGTGGTCGC +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVSRRLR*MQSGGR
Trigger: GCGACCACCAGACTGCATCAAGCGCAGCCTCCTAGA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGGCTGCGCTaGATGCAGTCTGGTGGTCGC +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDSRRLR*MQSGGR
Trigger: GCGACCACCAGACTGCATCAAGCGCAGCCTCCTAGA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp TCATATCCATGGCCGAACTGGGGACCTTGCGCAGGAGAGCCCCTATaGTGGCAGGACCCTGGCACTGCACCAGGCTCTCCTGATTCACGG +
Preference number: 5 (lower is better)
Translates to: SYPWPNWGPCAGEPL*WQDPGTAPGSPDSR
Trigger: CCGTGAATCAGGAGAGCCTGGTGCAGTGCCAGGGTCCTGCCATCATAGGGGCTCTCCTGCGCAAGGTCCCCAGTTCGGCCATGGATATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp TGCAGCCGTATCCTCTGGCGGTTCCGCTCGGGTAACCGCTCATTCTaGTGCAGTCTTCGCAAGATCTGGCCATCGTCACCGGTAGCTGCC +
Preference number: 5 (lower is better)
Translates to: CSRILWRFRSGNRSF*CSLRKIWPSSPVAA
Trigger: GGCAGCTACCGGTGACGATGGCCAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGATACGGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS CCA 90 bp ATCCATTCGTGCAGGTGGGTGGACACATACTCTGACTCCAGAGCCTaGCGGTGTTTCTGGATGAAATCCTCGGGGCTGCCGGCCCACGGG +
Preference number: 5 (lower is better)
Translates to: IHSCRWVDTYSDSRA*RCFWMKSSGLPAHG
Trigger: CCCGTGGGCCGGCAGCCCCGAGGATTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGAGTATGTGTCCACCCACCTGCACGAATGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GAGCGGTGCCCAGCAGAACAAAGTCTTCTGCCACAGTCAGGGCTGTaGGCTGCTCCGTCAGGGTCACTGAAGCCCGCAACCTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: ERCPAEQSLLPQSGL*AAPSGSLKPATSHS
Trigger: TGAATGGGAGGTTGCGGGCTTCAGTGACCCTGACGGAGCAGCCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTGCTGGGCACCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GTGGAAGTAACCCTCAAGCAGGGTACGCAGTTCTGGTCCTCGGGGTaGTGCTCGGCTAGCATGCAGAACGTGCACTGCACCCACCAGTGC +
Preference number: 5 (lower is better)
Translates to: VEVTLKQGTQFWSSG*CSASMQNVHCTHQC
Trigger: GCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAACTGCGTACCCTGCTTGAGGGTTACTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCGGAAGACAGCTGGATaGCTGAGGTCCAAGACTGGG +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRKTAG*LRSKTG
Trigger: CCCAGTCTTGGACCTCAGCAATCCAGCTGTCTTCCG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCGGAAGACAGCTGGATaGCTGAGGTCCAAGACTGGG +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRRKTAG*LRSKTG
Trigger: CCCAGTCTTGGACCTCAGCAATCCAGCTGTCTTCCG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACACCACACCGATGGGTTaGGACAGGTCCCGGAAGACA +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDTTPMG*DRSRKT
Trigger: TGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCACCACACCGATGGGTTaGGACAGGTCCCGGAAGACA +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVTTPMG*DRSRKT
Trigger: TGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCAGAGGCCGACGCTAGGTCTCCCCTCAGCCGGCGAGGGGCGGGACTTCCTGGTTATTTGCTCTTCTCCTaGGAGCTGATGACTTCCCCA +
Preference number: 5 (lower is better)
Translates to: SEADARSPLSRRGAGLPGYLLFS*ELMTSP
Trigger: TGGGGAAGTCATCAGCTCCAAGGAGAAGAGCAAATA...ACCAGGAAGTCCCGCCCCTCGCCGGCTGAGGGGAGACCTAGCGTCGGCCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGGGGTTTGCTGGGGGTaGCTCGTGTTCGAGGTATCA +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRGVCWG*LVFEVS
Trigger: TGATACCTCGAACACGAGCAACCCCCAGCAAACCCC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACCTCCTCTTCAGGGGTTaGCTGGGGGTTGCTCGTGTT +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDLLFRG*LGVARV
Trigger: AACACGAGCAACCCCCAGCAAACCCCTGAAGAGGAG...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCCTCCTCTTCAGGGGTTaGCTGGGGGTTGCTCGTGTT +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVLLFRG*LGVARV
Trigger: AACACGAGCAACCCCCAGCAAACCCCTGAAGAGGAG...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp CCGAGCCAATGCTGGCCCGTTCCAAACCCAGGTCAAAGGGTGTACTaGACGGGGAGAGGGCCTGGTAGAAAGCATCCTGGTCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: PSQCWPVPNPGQRVY*TGRGPGRKHPGQGK
Trigger: CTTGCCCTGACCAGGATGCTTTCTACCAGGCCCTCTCCCCGTTCAGTACACCCTTTGACCTGGGTTTGGAACGGGCCAGCATTGGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GAAGTAACCCTCAAGCAGGGTACGCAGTTCTGGTCCTCGGGGTGGTaGTCGGCTAGCATGCAGAACGTGCACTGCACCCACCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: EVTLKQGTQFWSSGW*SASMQNVHCTHQCS
Trigger: AGAGCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAACTGCGTACCCTGCTTGAGGGTTACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp AGGGGAGCCACTCATGATGCAGGTCAGCACTCTGACCACGTGCACTaGGATGGCATCGGTGTCCTGGTCAAGCACCTTCTGGACATCGGG +
Preference number: 5 (lower is better)
Translates to: RGATHDAGQHSDHVH*DGIGVLVKHLLDIG
Trigger: CCCGATGTCCAGAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCATCATGAGTGGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS GCA 90 bp GCCGAAGGGGAGCCACTCATGATGCAGGTCAGCACTCTGACCACGTaGACTGCGATGGCATCGGTGTCCTGGTCAAGCACCTTCTGGACA +
Preference number: 5 (lower is better)
Translates to: AEGEPLMMQVSTLTT*TAMASVSWSSTFWT
Trigger: TGTCCAGAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCATCATGAGTGGCTCCCCTTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS GCA 90 bp GCACAAGACGTAAGCCGATCTGCGCCATCTCCCGGAGATCTGCTGTaGTATTGGCGAGATGTGGCCAGGCTCCCAGGCGATCAAGCAGGT +
Preference number: 5 (lower is better)
Translates to: AQDVSRSAPSPGDLL*YWRDVARLPGDQAG
Trigger: ACCTGCTTGATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGCACAGCAGATCTCCGGGAGATGGCGCAGATCGGCTTACGTCTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GCCGAAGGGGAGCCACTCATGATGCAGGTCAGCACTCTGACCACGTaGACTGCGATGGCATCGGTGTCCTGGTCAAGCACCTTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: AEGEPLMMQVSTLTT*TAMASVSWSSTLLF
Trigger: GAACAGCAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCATCATGAGTGGCTCCCCTTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000149089.2
ENSMUST00000196488.5
CDS CCA 90 bp GCCCACGGGGGCAGCACCACATCACCCACCTTCTCGTTGGTCAACTaGAGGCAGCCCAGGTCAAAGCCATTCTGGTTCTCCAGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: AHGGSTTSPTFSLVN*RQPRSKPFWFSRKS
Trigger: TGACTTCCTGGAGAACCAGAATGGCTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGATGTGGTGCTGCCCCCGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp AACCCTGAGCCACTGCTGGTGAAGAAGCTGTACAGTTGTTTCCGCTaGAGGGGCCGGCTGGGAGCTGAGGTAGGAACCGCCTCTGACGAT +
Preference number: 5 (lower is better)
Translates to: NPEPLLVKKLYSCFR*RGRLGAEVGTASDD
Trigger: ATCGTCAGAGGCGGTTCCTACCTCAGCTCCCAGCCGGCCCCTCCAGCGGAAACAACTGTACAGCTTCTTCACCAGCAGTGGCTCAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp TGTGAGCCAAGGCTGTGGAGACTGATGACGCGGGAAGCCCTGTGGTaGTTGTCGTTGTGCGGTGCCCAGCAGAACCAATACAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: CEPRLWRLMTREALW*LSLCGAQQNQYSRR
Trigger: CCTCCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTCCACAGCCTTGGCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GAGTGTGAGCCAAGGCTGTGGAGACTGATGACGCGGGAAGCCCTGTaGTGGTTGTCGTTGTGCGGTGCCCAGCAGAACCAATACAGCAGG +
Preference number: 5 (lower is better)
Translates to: ECEPRLWRLMTREAL*WLSLCGAQQNQYSR
Trigger: CCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTCCACAGCCTTGGCTCACACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp CTAGCAACAAGACCCTGGAGACCACAGTCGTGCAGCCGTATCCTCTaGCGGTTCCGCTCGGGTAACCGCTCATTCTGCTGCAGTCTTCGC +
Preference number: 5 (lower is better)
Translates to: LATRPWRPQSCSRIL*RFRSGNRSFCCSLR
Trigger: GCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGATACGGCTGCACGACTGTGGTCTCCAGGGTCTTGTTGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp ACTCTGAAGGCAGGAAGACGTCAGAAGAGTCAGCGGGCAACTCAGTaGGCGGCGGAGATAGGGCCAGCTCTGAAGAGATCGGCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: TLKAGRRQKSQRATQ*AAEIGPALKRSAAL
Trigger: CAGAGCTGCCGATCTCTTCAGAGCTGGCCCTATCTCCGCCGCCCACTGAGTTGCCCGCTGACTCTTCTGACGTCTTCCTGCCTTCAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GACGTAAGCCGATCTGCGCCATCTCCCGGAGATCTGCTGTGCTATTaGCGAGATGTGGCCAGGCTCCCAGGCGATCAAGCAGGTTGCACA +
Preference number: 5 (lower is better)
Translates to: DVSRSAPSPGDLLCY*RDVARLPGDQAGCT
Trigger: TGTGCAACCTGCTTGATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGCACAGCAGATCTCCGGGAGATGGCGCAGATCGGCTTACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCACAAGCTGGGCATGCTaGGGATTCACCACACCGATG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVTSWAC*GFTTPM
Trigger: CATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGACAAGCTGGGCATGCTaGGGATTCACCACACCGATG +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRTSWAC*GFTTPM
Trigger: CATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTGGAGTCTGCCCGAAGTaGCTGATGATGCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSGVCPK*LMMPSR
Trigger: TCTGGAAGGCATCATCAGCAACTTCGGGCAGACTCC...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGGAGTCTGCCCGAAGTaGCTGATGATGCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVGVCPK*LMMPSR
Trigger: TCTGGAAGGCATCATCAGCAACTTCGGGCAGACTCC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCCCACAACGATCAATTaGCCATCTTCCAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSPTTIN*PSSRPT
Trigger: GGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGGG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGCCCACAACGATCAATTaGCCATCTTCCAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRPTTIN*PSSRPT
Trigger: GGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGGG...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGCGGCCGGAGGGAACTaGTATTTGCTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVAAGGN*YLLFSL
Trigger: CAAGGAGAAGAGCAAATACAAGTTCCCTCCGGCCGC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGGCGGCCGGAGGGAACTaGTATTTGCTCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRAAGGN*YLLFSL
Trigger: CAAGGAGAAGAGCAAATACAAGTTCCCTCCGGCCGC...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGGCGGCCTTGGGCAGTaGGGAAGGGCCGTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDGGLGQ*GRAVAH
Trigger: ATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGCC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGATCTGCTGTGCTATaGGCGAGATGTGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRSAVL*ARCGQA
Trigger: AGCCTGGCCACATCTCGCCAATAGCACAGCAGATCT...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp CCACACCGATGGGTTTGGACAGGTCCCGGAAGACAGCTGGATTGCTaGGGTCCAAGACTGGGGACACATAGTCCTGCAAGACCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: PHRWVWTGPGRQLDC*GPRLGTHSPARPRG
Trigger: TCCCCTGGGTCTTGCAGGACTATGTGTCCCCAGTCTTGGACCTCAGCAATCCAGCTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp GCAGAAGACGCCACACCATGCACGTGGTATCCCGGGAGCCGGAGATaGGGTAGATGCCGCAGGTGTCCAGTGCAAGGCAGGTCACTATAT +
Preference number: 5 (lower is better)
Translates to: AEDATPCTWYPGSRR*GRCRRCPVQGRSLY
Trigger: ATATAGTGACCTGCCTTGCACTGGACACCTGCGGCATCTACCTCATCTCCGGCTCCCGGGATACCACGTGCATGGTGTGGCGTCTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp CAGTCTTCGCAAGATCTTGCAGACCCTGTCGGTCAAAAGGGGCGTTaGCTTTGGCCGCACCAGCAGTGCGAGCAGCACCTCAAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: QSSQDLADPVGQKGR*LWPHQQCEQHLKVP
Trigger: GGGAACCTTGAGGTGCTGCTCGCACTGCTGGTGCGGCCAAAGTCAACGCCCCTTTTGACCGACAGGGTCTGCAAGATCTTGCGAAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GTGCCCAGCAGAACAAAGTCTTCTGCCACAGTCAGGGCTGTGGGCTaGTCCGTCAGGGTCACTGAAGCCCGCAACCTCCCATTCACTGAA +
Preference number: 5 (lower is better)
Translates to: VPSRTKSSATVRAVG*SVRVTEARNLPFTE
Trigger: TTCAGTGAATGGGAGGTTGCGGGCTTCAGTGACCCTGACGGAGCAGCCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTGCTGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp TGCTGCGTACCTCAGAAGGCTGCCCAGCGCCCACAACGATCAATTTaGCATCTTCCAGGCCCACCAGCACATGACTGCGCTCCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: CCVPQKAAQRPQRSI*HLPGPPAHDCAPWS
Trigger: TGACCAAGGAGCGCAGTCATGTGCTGGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGGGCGCTGGGCAGCCTTCTGAGGTACGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GAGACTGATGACGCGGGAAGCCCTGTGGTGGTTGTCGTTGTGCGGTaGCCAGCAGAACCAATACAGCAGGAGGAGAAAGGCTCACTGAGG +
Preference number: 5 (lower is better)
Translates to: ETDDAGSPVVVVVVR*PAEPIQQEEKGSLR
Trigger: CCTCAGTGAGCCTTTCTCCTCCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp CTGTGGAGACTGATGACGCGGGAAGCCCTGTGGTGGTTGTCGTTGTaGGGTGCCCAGCAGAACCAATACAGCAGGAGGAGAAAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LWRLMTREALWWLSL*GAQQNQYSRRRKAH
Trigger: GTGAGCCTTTCTCCTCCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp AGCCGTATCCTCTGGCGGTTCCGCTCGGGTAACCGCTCATTCTGCTaGAGTCTTCGCAAGATCTTGCAGACCCTGTCGGTCAAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: SRILWRFRSGNRSFC*SLRKILQTLSVKRG
Trigger: GCCCCTTTTGACCGACAGGGTCTGCAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGATACGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp CTCTCTTCCGACAAGCTAGCAACAAGACCCTGGAGACCACAGTCGTaGAGCCGTATCCTCTGGCGGTTCCGCTCGGGTAACCGCTCATTC +
Preference number: 5 (lower is better)
Translates to: LSSDKLATRPWRPQS*SRILWRFRSGNRSF
Trigger: GAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGATACGGCTGCACGACTGTGGTCTCCAGGGTCTTGTTGCTAGCTTGTCGGAAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp AGCCGTATCCTCTGGCGGTTCCGCTCGGGTAACCGCTCATTCTGCTaGAGTCTTCGCAAGATCTGGCCATCGTCACCGGTAGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: SRILWRFRSGNRSFC*SLRKIWPSSPVAAK
Trigger: TTTGGCAGCTACCGGTGACGATGGCCAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGATACGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS CCA 90 bp GCCATTCGGCTGTGGCACAAAAAGCCTGGAAGTCCTCAAAGAAGGTaGGGCTTCCATTGGTGGGTGGTAAGGAGGGCAGCCCCCACTGCA +
Preference number: 5 (lower is better)
Translates to: AIRLWHKKPGSPQRR*GFHWWVVRRAAPTA
Trigger: TGCAGTGGGGGCTGCCCTCCTTACCACCCACCAATGGAAGCCCCACCTTCTTTGAGGACTTCCAGGCTTTTTGTGCCACAGCCGAATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp CACGAAGCATCTCCAGTGGGGAGCGGCTGCTTAGGTAGCCTTGGGTaGGTGGCCTTAGGCGCAGAAGCAATGAGTACACCTGGTTCCGTA +
Preference number: 5 (lower is better)
Translates to: HEASPVGSGCLGSLG*VALGAEAMSTPGSV
Trigger: TACGGAACCAGGTGTACTCATTGCTTCTGCGCCTAAGGCCACCCACCCAAGGCTACCTAAGCAGCCGCTCCCCACTGGAGATGCTTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GCCATCAATACAGTGAGCAACGCCAGCACACGGGGCACCAGTACCTaGCCCCAACCAGCCTCTACGTTCTCTAGGTTCCTGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: AINTVSNASTRGTST*PQPASTFSRFLQRM
Trigger: CATCCTCTGCAGGAACCTAGAGAACGTAGAGGCTGGTTGGGGCCAGGTACTGGTGCCCCGTGTGCTGGCGTTGCTCACTGTATTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp ACCACGTGCACTGCGATGGCATCGGTGTCCTGGTCAAGCACCTTCTaGACATCGGGCTCAGTCAGTAACCAGGTAGCCAGGTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: TTCTAMASVSWSSTF*TSGSVSNQVARSLS
Trigger: GGACAGTGACCTGGCTACCTGGTTACTGACTGAGCCCGATGTCCAGAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS CCA 90 bp CTGCATCAGCACCAGCACTGGCTGCTCGTTGCGGATTGGTGGAGGTaGGTGCATGCTGTGGTCACCCTCCACAGCCATGTTGAGCAATTC +
Preference number: 5 (lower is better)
Translates to: LHQHQHWLLVADWWR*VHAVVTLHSHVEQF
Trigger: GAATTGCTCAACATGGCTGTGGAGGGTGACCACAGCATGCACCCACCTCCACCAATCCGCAACGAGCAGCCAGTGCTGGTGCTGATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GATATCTCTCGCTGTACCCATTTCTGGGTAAGTCCCGAGGCACGAAGCATCTCCATCCTGCCAGCCAGCTaGTCGGGCCAGCAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: DISRCTHFWVSPEARSISILPAS*SGQQPN
Trigger: GTTCGGCTGCTGGCCCGACAAGCTGGCTGGCAGGAT...GGAGATGCTTCGTGCCTCGGGACTTACCCAGAAATGGGTACAGCGAGAGATATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123996.2
CDS-3UTR CAA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGCCGAACGCCGCAGGTaGAAACGCCGCAGGTGGACC +
Preference number: 5 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDAERRR*KRRRWT
Trigger: GGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGGC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGAGTGGAACTTGTCGATaGTGCCTGCTGGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRSGTCR*CLLGPQ
Trigger: TTGAGGACCCAGCAGGCACAATCGACAAGTTCCACT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACAAAGGCCTTCAGCCATaGCTGCAGGTAACCAAGGTC +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDKGLQP*LQVTKV
Trigger: GACCTTGGTTACCTGCAGCAATGGCTGAAGGCCTTT...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCGAGATTCATTTCCACTaGACTCTGAGTCCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVEIHFH*TLSPAP
Trigger: CGGGGCTGGACTCAGAGTCAAGTGGAAATGAATCTC...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGGAGCTGTGGCGGCCTaGGGCAGTTGGGAAGGGCCG +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPGAVAA*GSWEGP
Trigger: CGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTCC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS TCA 90 bp GGGGTAGTGAAGTCACTCGTAGGCTGCCATCCCAGTGGCCACCACTaGAGAGCAGCTTTCCGTCAGGAGCTACTGCTAGTGCTTGTGCAC +
Preference number: 5 (lower is better)
Translates to: GVVKSLVGCHPSGHH*RAAFRQELLLVLVH
Trigger: GTGCACAAGCACTAGCAGTAGCTCCTGACGGAAAGCTGCTCTTCAGTGGTGGCCACTGGGATGGCAGCCTACGAGTGACTTCACTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp AGAGCCCCTATGATGGCAGGACCCTGGCACTGCACCAGGCTCTCCTaGTTCACGGTGTGGTTCTGCAGGAAGTTCCGAAGCATCAGGAGA +
Preference number: 5 (lower is better)
Translates to: RAPMMAGPWHCTRLS*FTVWFCRKFRSIRR
Trigger: TCTCCTGATGCTTCGGAACTTCCTGCAGAACCACACCGTGAATCAGGAGAGCCTGGTGCAGTGCCAGGGTCCTGCCATCATAGGGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GCACTCACGCCACTGTCTGAGACCCAGGGCCCACTCAGTAGTTTCTaGACCTTGGGGCTCCCCATGGTGGGATCTTTGCTGAAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: ALTPLSETQGPLSSF*TLGLPMVGSLLKVK
Trigger: CTTTACCTTCAGCAAAGATCCCACCATGGGGAGCCCCAAGGTGCAGAAACTACTGAGTGGGCCCTGGGTCTCAGACAGTGGCGTGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp TCCGCTCGGGTAACCGCTCATTCTGCTGCAGTCTTCGCAAGATCTTaGAGACCCTGTCGGTCAAAAGGGGCGTTGACTTTGGCCGCACCA +
Preference number: 5 (lower is better)
Translates to: SARVTAHSAAVFARS*RPCRSKGALTLAAP
Trigger: TGGTGCGGCCAAAGTCAACGCCCCTTTTGACCGACAGGGTCTGCAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp TGCAGCCGTATCCTCTGGCGGTTCCGCTCGGGTAACCGCTCATTCTaGTGCAGTCTTCGCAAGATCTTGCAGACCCTGTCGGTCAAAAGG +
Preference number: 5 (lower is better)
Translates to: CSRILWRFRSGNRSF*CSLRKILQTLSVKR
Trigger: CCTTTTGACCGACAGGGTCTGCAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGATACGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp AGGGGAGCCACTCATGATGCAGGTCAGCACTCTGACCACGTGCACTaGGATGGCATCGGTGTCCTGGTCAAGCACCTTGCTGTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: RGATHDAGQHSDHVH*DGIGVLVKHLAVLD
Trigger: ATCCAGAACAGCAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCATCATGAGTGGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000149089.2
ENSMUST00000196488.5
CDS CCA 90 bp TCCCATGTCTCCACCCTATGTCCTGTCAGACGGCCATCCAGCCCATaGCCAGGGGACAGGTCCAGACAGATATTGTTCTTACAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SHVSTLCPVRRPSSP*PGDRSRQILFLQAC
Trigger: GCAGGCCTGTAAGAACAATATCTGTCTGGACCTGTCCCCTGGCCATGGGCTGGATGGCCGTCTGACAGGACATAGGGTGGAGACATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GATCTGCGCCATCTCCCGGAGATCTGCTGTGCTATTGGCGAGATGTaGCCAGGCTCCCAGGCGATCAAGCAGGTTGCACACACCTTCAAA +
Preference number: 5 (lower is better)
Translates to: DLRHLPEICCAIGEM*PGSQAIKQVAHTFK
Trigger: TTTGAAGGTGTGTGCAACCTGCTTGATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGCACAGCAGATCTCCGGGAGATGGCGCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATATCCTGCCAGCCAGCTaGTCGGGCCAGCAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDILPAS*SGQQPN
Trigger: GTTCGGCTGCTGGCCCGACAAGCTGGCTGGCAGGAT...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGCCTGCTGGGAAAGGTaGGCCAGGCCTCCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPACWER*ARPPGG
Trigger: TCCCCCAGGAGGCCTGGCCAACCTTTCCCAGCAGGC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS TCA 90 bp ACTGTCTTGACCAGATGGCCATCTTTGAAGACATTGACCAGGTTCTaGCTGAAGGGTCGGCGCCCGGGCACATGCACAATGGCCACGCAG +
Preference number: 5 (lower is better)
Translates to: TVLTRWPSLKTLTRF*LKGRRPGTCTMATQ
Trigger: CTGCGTGGCCATTGTGCATGTGCCCGGGCGCCGACCCTTCAGTCAGAACCTGGTCAATGTCTTCAAAGATGGCCATCTGGTCAAGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp GGAGGAGCAACTTGGTGCCAAACTCATGTAGTTCACCCTCAGGCTTaGAGGGTGCTGGCTCATTGGGCCCCAGGCTACACAGGACCCTTA +
Preference number: 5 (lower is better)
Translates to: GGATWCQTHVVHPQA*RVLAHWAPGYTGPL
Trigger: TAAGGGTCCTGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAACTACATGAGTTTGGCACCAAGTTGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GGACGTGAAGGGCTCCACGCGGATGAGGTAGTGCATCACGCCCGCTaGGTTAGAATAGTGTGTGCCATAGTGGAACTTGTCGATTGTGCC +
Preference number: 5 (lower is better)
Translates to: GREGLHADEVVHHAR*VRIVCAIVELVDCA
Trigger: GGCACAATCGACAAGTTCCACTATGGCACACACTATTCTAACGCAGCGGGCGTGATGCACTACCTCATCCGCGTGGAGCCCTTCACGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GGCAGGTCACTATATCAAGGTGTCGGCTTAGCTGATTCAACAGCCTaGCACGGGGTAGTGAAGTCACTCGTAGGCTGCCATCCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GRSLYQGVGLADSTA*HGVVKSLVGCHPSG
Trigger: GCCACTGGGATGGCAGCCTACGAGTGACTTCACTACCCCGTGGCAGGCTGTTGAATCAGCTAAGCCGACACCTTGATATAGTGACCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp TGGATGAGCCGCAACAGCAACGTGGGAGGCAAACGCTCTGCATCCTaGAGGTTCTCTTGGAAGAAGGCTCCAAATTCACAGGGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: WMSRNSNVGGKRSAS*RFSWKKAPNSQGKA
Trigger: CGCCTTGCCCTGTGAATTTGGAGCCTTCTTCCAAGAGAACCTGCAGGATGCAGAGCGTTTGCCTCCCACGTTGCTGTTGCGGCTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GGGATTCACCACACCGATGGGTTTGGACAGGTCCCGGAAGACAGCTaGATTGCTGAGGTCCAAGACTGGGGACACATAGTCCTGCAAGAC +
Preference number: 5 (lower is better)
Translates to: GIHHTDGFGQVPEDS*IAEVQDWGHIVLQD
Trigger: GTCTTGCAGGACTATGTGTCCCCAGTCTTGGACCTCAGCAATCCAGCTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GGTCCAGGCAGTGTGGCACCTGGAGGCCTTAATGCTGCCACAAACTaGCCTCGACGTACAGTGTGTATGATCACAGTCCCATCCTCGGAT +
Preference number: 5 (lower is better)
Translates to: GPGSVAPGGLNAATN*PRRTVCMITVPSSD
Trigger: ATCCGAGGATGGGACTGTGATCATACACACTGTACGTCGAGGCCAGTTTGTGGCAGCATTAAGGCCTCCAGGTGCCACACTGCCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp AGCATTGAGAATGTGGAAGTAACCCTCAAGCAGGGTACGCAGTTCTaGTCCTCGGGGTGGTGCTCGGCTAGCATGCAGAACGTGCACTGC +
Preference number: 5 (lower is better)
Translates to: SIENVEVTLKQGTQF*SSGWCSASMQNVHC
Trigger: GCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAACTGCGTACCCTGCTTGAGGGTTACTTCCACATTCTCAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAAGGCCTTGAGTTGGTaGAGGTTCTGGAAGATGCTT +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVKALSW*RFWKML
Trigger: AAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGCTGCTCGTTGCGGATaGGTGGAGGTGGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDAARCG*VEVGAC
Trigger: GCATGCACCCACCTCCACCAATCCGCAACGAGCAGC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGACCAGATGGCCATCTTaGAAGACATTGACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRTRWPS*KTLTRF
Trigger: GAACCTGGTCAATGTCTTCAAAGATGGCCATCTGGT...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTCGAAAAGGTACTGTCTaGACCAGATGGCCATCTTTG +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSRKGTV*TRWPSL
Trigger: CAAAGATGGCCATCTGGTCAAGACAGTACCTTTTCG...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCGGTCCTCTGAGGACTaGCCCAGGGGGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPRSSED*PRGRSR
Trigger: CCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACCG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS TCA 90 bp AGCGAAAAAGGCCTTGAGTTGGTTGAGGTTCTGGAAGATGCTTGGTaGGTTAGTGTCCAGCCGGGCGAGGCGATTGGCTGCTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SEKGLELVEVLEDAW*VSVQPGEAIGCFLS
Trigger: GCTGAGGAAGCAGCCAATCGCCTCGCCCGGCTGGACACTAACTCACCAAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTTTTTCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp ACGGCGGGCCGCAATTTGTTCAAGTGGAGGATATGTAGAGAGCACTaGGCGGTGCCCAGCAGAACAAAGTCTTCTGCCACAGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TAGRNLFKWRICREH*AVPSRTKSSATVRA
Trigger: AGCCCTGACTGTGGCAGAAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTCTACATATCCTCCACTTGAACAAATTGCGGCCCGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GCTGGGTCCTCAAAGCTCTCATATTTCTCCCTCACAAGCTGGGCATaGTTGGGATTCACCACACCGATGGGTTTGGACAGGTCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: AGSSKLSYFSLTSWA*LGFTTPMGLDRSRK
Trigger: CTTCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAAATATGAGAGCTTTGAGGACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GAAGTTGCTGATGATGCCTTCCAGAGCCTTCCGCTCCCGTTCATCTaGCACGTGGTCCAGGTCAACCGCCCCTTCGTAAGTGCAGTAATA +
Preference number: 5 (lower is better)
Translates to: EVADDAFQSLPLPFI*HVVQVNRPFVSAVI
Trigger: TATTACTGCACTTACGAAGGGGCGGTTGACCTGGACCACGTGGCAGATGAACGGGAGCGGAAGGCTCTGGAAGGCATCATCAGCAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp ACCTGGGCCCCAGGACGTTCACAAGCAGAGCTTTGTACAACAATCTaGCCTTCAGCCCCCAGTGCTAAGTGCGATATAGGTCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: TWAPGRSQAELCTTI*PSAPSAKCDIGPGS
Trigger: ACTGCCTGGACCTATATCGCACTTAGCACTGGGGGCTGAAGGCCAGATTGTTGTACAAAGCTCTGCTTGTGAACGTCCTGGGGCCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp CACACACCTTCAAAGAGCTTCTCACTCCACAGCTCCTGGTTACCGTaGCCCTCAGCACACAGGAAATCCTGCAGTAAACGGAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: HTPSKSFSLHSSWLP*PSAHRKSCSKRSSH
Trigger: GTGGCTGCTCCGTTTACTGCAGGATTTCCTGTGTGCTGAGGGCCACGGTAACCAGGAGCTGTGGAGTGAGAAGCTCTTTGAAGGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCATCCTGCCAGCCAGCTaGTCGGGCCAGCAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSILPAS*SGQQPN
Trigger: GTTCGGCTGCTGGCCCGACAAGCTGGCTGGCAGGAT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATGAGGACGCGGCCACCTaGTGTGGGAAGTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDEDAAT*CGKLRK
Trigger: CTTCCTCAACTTCCCACACAAGGTGGCCGCGTCCTC...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTTCACAAGCAGAGCTTaGTACAACAATCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVFTSRA*YNNLAF
Trigger: GAAGGCCAGATTGTTGTACAAAGCTCTGCTTGTGAA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTAGGTTCACAAGCAGAGCTTaGTACAACAATCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GQRIRLGPGLMSERLDSRFTSRA*YNNLAF
Trigger: GAAGGCCAGATTGTTGTACAAAGCTCTGCTTGTGAA...CCTAGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTCTTGCTCAAAGCAATTGTaGCTAAGGAAGGTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: PGQRIRLGPGLMSERLDSCSKQL*LRKVAC
Trigger: ACAAGCCACCTTCCTTAGCAACAATTGCTTTGAGCA...AGAGTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGAGCGCCTAGACTGCTCAAAGCAATTGTaGCTAAGGAAGGTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: SPGQRIRLGPGLMSERLDCSKQL*LRKVAC
Trigger: ACAAGCCACCTTCCTTAGCAACAATTGCTTTGAGCA...GTCTAGGCGCTCAGACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCTGCTCAAAGCAATTGTaGCTAAGGAAGGTGGCTTGT +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVCSKQL*LRKVAC
Trigger: ACAAGCCACCTTCCTTAGCAACAATTGCTTTGAGCA...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTGGTGCAGTAGTCTCCTGGGCAGAGAATCAGGCTCGGGCCGGGTCTGATGTCAGATGCTCAAAGCAATaGTTGCTAAGGAAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PGAVVSWAENQARAGSDVRCSKQ*LLRKVA
Trigger: AGCCACCTTCCTTAGCAACAATTGCTTTGAGCATCT...GACATCAGACCCGGCCCGAGCCTGATTCTCTGCCCAGGAGACTACTGCACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGCTGCTCGTTGCGGATaGGTGGAGGTGGGTGCATGC +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPAARCG*VEVGAC
Trigger: GCATGCACCCACCTCCACCAATCCGCAACGAGCAGC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGCCCACCAGGCCTGCTaGCACACAGGTGGTGCGACT +
Preference number: 5 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSAHQAC*HTGGAT
Trigger: AGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGGC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCAAGGGTGCTGGCTCATaGGGCCCCAGGCTACACAGG +
Preference number: 5 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPKGAGS*GPRLHR
Trigger: CCTGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCGGAGTAACAGTCCCATaGCTGCTGCCGCCACCAGCG +
Preference number: 5 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPGVTVP*LLPPPA
Trigger: CGCTGGTGGCGGCAGCAGCAATGGGACTGTTACTCC...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCTAGGAGGCTGCGCTaGATGCAGTCTGGTGGTCGC +
Preference number: 5 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDSRRLR*MQSGGR
Trigger: GCGACCACCAGACTGCATCAAGCGCAGCCTCCTAGA...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS TCA 90 bp CAGTCCCATCCTCGGATCCAGACACGGCCATGTCAAGTTCAGTGCTaGTGGCCACACAGCTCACTGCAGCTACATGTCCGTATAAGACCT +
Preference number: 5 (lower is better)
Translates to: QSHPRIQTRPCQVQC*WPHSSLQLHVRIRP
Trigger: AGGTCTTATACGGACATGTAGCTGCAGTGAGCTGTGTGGCCATCAGCACTGAACTTGACATGGCCGTGTCTGGATCCGAGGATGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp ATCGAGCATGCTGACCCGCAGGGTGACAAGGGCCTCTTCGGGGCTTaGACTTGGACTAGTTGGCCAGTCAGCATTGAGAATGTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: IEHADPQGDKGLFGA*TWTSWPVSIENVEV
Trigger: TACTTCCACATTCTCAATGCTGACTGGCCAACTAGTCCAAGTTCAAGCCCCGAAGAGGCCCTTGTCACCCTGCGGGTCAGCATGCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GCAGAGCTTTGTACAACAATCTGGCCTTCAGCCCCCAGTGCTAAGTaGGATATAGGTCCAGGCAGTGTGGCACCTGGAGGCCTTAATGCT +
Preference number: 5 (lower is better)
Translates to: AELCTTIWPSAPSAK*DIGPGSVAPGGLNA
Trigger: AGCATTAAGGCCTCCAGGTGCCACACTGCCTGGACCTATATCGCACTTAGCACTGGGGGCTGAAGGCCAGATTGTTGTACAAAGCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp GCCGCAATTTGTTCAAGTGGAGGATATGTAGAGAGCACTGAGCGGTaGCCAGCAGAACAAAGTCTTCTGCCACAGTCAGGGCTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: AAICSSGGYVESTER*PAEQSLLPQSGLWA
Trigger: AGCCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTCTACATATCCTCCACTTGAACAAATTGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp AAAGAGGTGGATGAGCCGCAACAGCAACGTGGGAGGCAAACGCTCTaGATCCTGCAGGTTCTCTTGGAAGAAGGCTCCAAATTCACAGGG +
Preference number: 5 (lower is better)
Translates to: KEVDEPQQQRGRQTL*ILQVLLEEGSKFTG
Trigger: CCCTGTGAATTTGGAGCCTTCTTCCAAGAGAACCTGCAGGATGCAGAGCGTTTGCCTCCCACGTTGCTGTTGCGGCTCATCCACCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp TGCTTGTCGATGAAGTGGCGCCATTCGGCTGTGGCACAAAAAGCCTaGAAGTCCTCAAAGAAGGTGGGGCTTCCATTGGTGGGTGGTAAG +
Preference number: 5 (lower is better)
Translates to: CLSMKWRHSAVAQKA*KSSKKVGLPLVGGK
Trigger: CTTACCACCCACCAATGGAAGCCCCACCTTCTTTGAGGACTTCCAGGCTTTTTGTGCCACAGCCGAATGGCGCCACTTCATCGACAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp GGTCCTCAAAGCTCTCATATTTCTCCCTCACAAGCTGGGCATGCTTaGGATTCACCACACCGATGGGTTTGGACAGGTCCCGGAAGACAG +
Preference number: 5 (lower is better)
Translates to: GPQSSHISPSQAGHA*DSPHRWVWTGPGRQ
Trigger: CTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAAATATGAGAGCTTTGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp AGCAGGTTGCACACACCTTCAAAGAGCTTCTCACTCCACAGCTCCTaGTTACCGTGGCCCTCAGCACACAGGAAATCCTGCAGTAAACGG +
Preference number: 5 (lower is better)
Translates to: SRLHTPSKSFSLHSS*LPWPSAHRKSCSKR
Trigger: CCGTTTACTGCAGGATTTCCTGTGTGCTGAGGGCCACGGTAACCAGGAGCTGTGGAGTGAGAAGCTCTTTGAAGGTGTGTGCAACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAGAGGACGCGGCCACCTaGTGTGGGAAGTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPEDAAT*CGKLRK
Trigger: CTTCCTCAACTTCCCACACAAGGTGGCCGCGTCCTC...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACTGTGGTGGTTGTCGTaGTGCGGTGCCCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPLWWLS*CGAQQN
Trigger: GTTCTGCTGGGCACCGCACAACGACAACCACCACAG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS TCA 90 bp AACATGTCCGAGGAGCTCTGGGTGATAAAGGAGTGTGACTGTCGGTaGGGAACCAGAGCTAAGACCAGAGGTACAGCCTCACTGACAACC +
Preference number: 5 (lower is better)
Translates to: NMSEELWVIKECDCR*GTRAKTRGTASLTT
Trigger: GGTTGTCAGTGAGGCTGTACCTCTGGTCTTAGCTCTGGTTCCTCACCGACAGTCACACTCCTTTATCACCCAGAGCTCCTCGGACATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp CTTACAGTCACCTCAGCGAAAAAGGCCTTGAGTTGGTTGAGGTTCTaGAAGATGCTTGGTGAGTTAGTGTCCAGCCGGGCGAGGCGATTG +
Preference number: 5 (lower is better)
Translates to: LTVTSAKKALSWLRF*KMLGELVSSRARRL
Trigger: CAATCGCCTCGCCCGGCTGGACACTAACTCACCAAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTTTTTCGCTGAGGTGACTGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131017.8
CDS CCA 90 bp AGCCCACTGGCACTTACAGTCACCTCAGCGAAAAAGGCCTTGAGTTaGTTGAGGTTCTGGAAGATGCTTGGTGAGTTAGTGTCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: SPLALTVTSAKKALS*LRFWKMLGELVSSR
Trigger: CCGGCTGGACACTAACTCACCAAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTTTTTCGCTGAGGTGACTGTAAGTGCCAGTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131017.8
CDS CCA 90 bp TCACTGACAACCTCAGCGAAAAAGGCCTTGAGTTGGTTGAGGTTCTaGAAGATGCTTGGTGAGTTAGTGTCCAGCCGGGCGAGGCGATTG +
Preference number: 5 (lower is better)
Translates to: SLTTSAKKALSWLRF*KMLGELVSSRARRL
Trigger: CAATCGCCTCGCCCGGCTGGACACTAACTCACCAAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTTTTTCGCTGAGGTTGTCAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 90 bp TTCCGCTCGGGTAACCGCTCATTCTGCTGCAGTCTTCGCAAGATCTaGCCATCGTCACCGGTAGCTGCCAAAAAGTTCAATACAACCTGC +
Preference number: 5 (lower is better)
Translates to: FRSGNRSFCCSLRKI*PSSPVAAKKFNTTC
Trigger: GCAGGTTGTATTGAACTTTTTGGCAGCTACCGGTGACGATGGCCAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS-3UTR CAA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCGAGGACGCGGCCACCTaGTGTGGGAAGTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSEDAAT*CGKLRK
Trigger: CTTCCTCAACTTCCCACACAAGGTGGCCGCGTCCTC...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCACGGAAGACAGCTGGATaGCTGAGGTCCAAGACTGGG +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPRKTAG*LRSKTG
Trigger: CCCAGTCTTGGACCTCAGCAATCCAGCTGTCTTCCG...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCACCACACCGATGGGTTaGGACAGGTCCCGGAAGACA +
Preference number: 5 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPTTPMG*DRSRKT
Trigger: TGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATACAAGCTGGGCATGCTaGGGATTCACCACACCGATG +
Preference number: 5 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDTSWAC*GFTTPM
Trigger: CATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGT...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCTCTAGGAGGCTGCGCTaGATGCAGTCTGGTGGTCGC +
Preference number: 5 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSSRRLR*MQSGGR
Trigger: GCGACCACCAGACTGCATCAAGCGCAGCCTCCTAGA...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATAGATCTGCTGTGCTATaGGCGAGATGTGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDRSAVL*ARCGQA
Trigger: AGCCTGGCCACATCTCGCCAATAGCACAGCAGATCT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS CCA 90 bp AGAGGTACAGCCTCACTGACAACCTCAGCGAAAAAGGCCTTGAGTTaGTTGAGGTTCTGGAAGATGCTTGGTGAGTTAGTGTCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: RGTASLTTSAKKALS*LRFWKMLGELVSSR
Trigger: CCGGCTGGACACTAACTCACCAAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTTTTTCGCTGAGGTTGTCAGTGAGGCTGTACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCCCACAACGATCAATTaGCCATCTTCCAGGCCCACC +
Preference number: 5 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPPTTIN*PSSRPT
Trigger: GGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGGG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATAAAGGCCTTCAGCCATaGCTGCAGGTAACCAAGGTC +
Preference number: 5 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDKGLQP*LQVTKV
Trigger: GACCTTGGTTACCTGCAGCAATGGCTGAAGGCCTTT...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAAGATCTGCTGTGCTATaGGCGAGATGTGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPRSAVL*ARCGQA
Trigger: AGCCTGGCCACATCTCGCCAATAGCACAGCAGATCT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCAGTGGAACTTGTCGATaGTGCCTGCTGGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPSGTCR*CLLGPQ
Trigger: TTGAGGACCCAGCAGGCACAATCGACAAGTTCCACT...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAAGTGGAACTTGTCGATaGTGCCTGCTGGGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPSGTCR*CLLGPQ
Trigger: TTGAGGACCCAGCAGGCACAATCGACAAGTTCCACT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGATCTGCTGTGCTATaGGCGAGATGTGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRSAVL*ARCGQA
Trigger: AGCCTGGCCACATCTCGCCAATAGCACAGCAGATCT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 90 bp CTGCCCGCTGCTCATGAGTGTGTCGTAGCAGGCATTCCAGAAGCCTaGCATGAGGTCATGGCTCTTAGCATATGTGTCCATTTCAAACTT +
Preference number: 5 (lower is better)
Translates to: LPAAHECVVAGIPEA*HEVMALSICVHFKL
Trigger: AAGTTTGAAATGGACACATATGCTAAGAGCCATGACCTCATGTCAGGCTTCTGGAATGCCTGCTACGACACACTCATGAGCAGCGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 90 bp TGCGTTAGAATAGTGTGTGCCATAGTGGAACTTGTCGATTGTGCCTaGTGGGTCCTCAAAGCTCTCATATTTCTCCCTCACAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: CVRIVCAIVELVDCA*WVLKALIFLPHKLG
Trigger: GCCCAGCTTGTGAGGGAGAAATATGAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAGTTCCACTATGGCACACACTATTCTAACGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAAAGGCCTTCAGCCATaGCTGCAGGTAACCAAGGTC +
Preference number: 5 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSKGLQP*LQVTKV
Trigger: GACCTTGGTTACCTGCAGCAATGGCTGAAGGCCTTT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTATTTGCTCTTCTCCTaGGAGCTGATGACTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDYLLFS*ELMTSP
Trigger: TGGGGAAGTCATCAGCTCCAAGGAGAAGAGCAAATA...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATCGAAAAGGTACTGTCTaGACCAGATGGCCATCTTTG +
Preference number: 5 (lower is better)
Translates to: GHRWSLCFHWDVGFESRDRKGTV*TRWPSL
Trigger: CAAAGATGGCCATCTGGTCAAGACAGTACCTTTTCG...ATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS GCA 90 bp ATTCTGCTGCAGTCTTCGCAAGATCTGGCCATCGTCACCGGTAGCTaGCAAAAAGTTCAATACAACCTGCATGTCTTCCACCGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: ILLQSSQDLAIVTGS*QKVQYNLHVFHREV
Trigger: AACTTCTCGGTGGAAGACATGCAGGTTGTATTGAACTTTTTGGCAGCTACCGGTGACGATGGCCAGATCTTGCGAAGACTGCAGCAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS CCA 90 bp GTTAGAATAGTGTGTGCCATAGTGGAACTTGTCGATTGTGCCTGCTaGGTCCTCAAAGCTCTCATATTTCTCCCTCACAAGCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: VRIVCAIVELVDCAC*VLKALIFLPHKLGM
Trigger: CATGCCCAGCTTGTGAGGGAGAAATATGAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAGTTCCACTATGGCACACACTATTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp CCTTTGAGGATTAAGGCCACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTCACAAGCAGAGCTTaGTACAACAATCTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PLRIKATGGLCAFTGTWDFTSRA*YNNLAF
Trigger: GAAGGCCAGATTGTTGTACAAAGCTCTGCTTGTGAA...ATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGTGGCCTTAATCCTCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp TGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCTCCCAACCAGATGGCCATCTTaGAAGACATTGACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: WSLCFHWDVGFESRDSLPTRWPS*KTLTRF
Trigger: GAACCTGGTCAATGTCTTCAAAGATGGCCATCTGGT...TGGGAGGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp ACAGGTGGTCTTTGTGCTTTCACTGGGACGTGGGATTTGAAAGTAGGGATTCCCCGAAAAGGTACTGTCTaGACCAGATGGCCATCTTTG +
Preference number: 5 (lower is better)
Translates to: TGGLCAFTGTWDLKVGIPRKGTV*TRWPSL
Trigger: CAAAGATGGCCATCTGGTCAAGACAGTACCTTTTCG...GGGAATCCCTACTTTCAAATCCCACGTCCCAGTGAAAGCACAAAGACCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS-3UTR CAA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCACCAGATGGCCATCTTaGAAGACATTGACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSTRWPS*KTLTRF
Trigger: GAACCTGGTCAATGTCTTCAAAGATGGCCATCTGGT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS-3UTR CAA 90 bp GATTTGAAAGTAGGGATTCCCTCCCACCCCAGATTGTGCAAAATATGCAGCAGCAGATGCTCAAAGCAATaGTTGCTAAGGAAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DLKVGIPSHPRLCKICSSRCSKQ*LLRKVA
Trigger: AGCCACCTTCCTTAGCAACAATTGCTTTGAGCATCT...GCTGCTGCATATTTTGCACAATCTGGGGTGGGAGGGAATCCCTACTTTCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp ACGTGCAGGACCCCGGTGCCGGGCCATGCCCGACAGTaGCCGGATGACGGCGCCTGCATGGCGAGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: TCRTPVPGHARQ*PDDGACMASLL
Trigger: CAGAAGGCTCGCCATGCAGGCGCCGTCATCCGGGCACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CACGTCGGCGGGGCTCTCCAGCCGTGCCTGCCAGGCTaGTGCCACCGAGTGGAACTGCCGGTCAGAGCAGTC +
Preference number: 6 (lower is better)
Translates to: HVGGALQPCLPG*CHRVELPVRAV
Trigger: GACTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAGCCCCGCCGACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GCCGCGAGGAGCGCCACAGCCTCCGCGCGAACTGGCTaGTGCGTACCTCAGAAGGCTGCCCAGCGCCCACAA +
Preference number: 6 (lower is better)
Translates to: AARSATASARTG*CVPQKAAQRPQ
Trigger: TTGTGGGCGCTGGGCAGCCTTCTGAGGTACGCAGCAGCCAGTTCGCGCGGAGGCTGTGGCGCTCCTCGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TCGAGCGCCGAACGCCGCAGGTTGAAACGCCGCAGGTaGACCTCACGCAGCTGGGCCAAGGGGCGCCGGAAG +
Preference number: 6 (lower is better)
Translates to: SSAERRRLKRRR*TSRSWAKGRRK
Trigger: CTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCACCTGCGGCGTTTCAACCTGCGGCGTTCGGCGCTCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GTCGGCGGGGCTCTCCAGCCGTGCCTGCCAGGCTGCTaGCACCGAGTGGAACTGCCGGTCAGAGCAGTCGAA +
Preference number: 6 (lower is better)
Translates to: VGGALQPCLPGC*HRVELPVRAVE
Trigger: TTCGACTGCTCTGACCGGCAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAGCCCCGCCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp AGCTCCTTCACGTCGGCGGGGCTCTCCAGCCGTGCCTaGCAGGCTGCTGCCACCGAGTGGAACTGCCGGTCA +
Preference number: 6 (lower is better)
Translates to: SSFTSAGLSSRA*QAAATEWNCRS
Trigger: TGACCGGCAGTTCCACTCGGTGGCAGCAGCCTGGCAGGCACGGCTGGAGAGCCCCGCCGACGTGAAGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GCGAGGAGCGCCACAGCCTCCGCGCGAACTGGCTGCTaGGTACCTCAGAAGGCTGCCCAGCGCCCACAACGA +
Preference number: 6 (lower is better)
Translates to: ARSATASARTGC*VPQKAAQRPQR
Trigger: TCGTTGTGGGCGCTGGGCAGCCTTCTGAGGTACGCAGCAGCCAGTTCGCGCGGAGGCTGTGGCGCTCCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CATGCTGGGCGTGAGGTCAAAGTAGCGCAGGGCACGTaGAGGACCCCGGTGCCGGGCCATGCCCGACAGTGC +
Preference number: 6 (lower is better)
Translates to: HAGREVKVAQGT*RTPVPGHARQC
Trigger: GCACTGTCGGGCATGGCCCGGCACCGGGGTCCTGCACGTGCCCTGCGCTACTTTGACCTCACGCCCAGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp AGCGGGGAGGGTGTGCCAGGCTGGCTGGCCGGAGTAACAGTCCCATaGCTGCTGCCGCCACCAGCGGTATTGCCCGAGCCAATGCTGGCC +
Preference number: 6 (lower is better)
Translates to: SGEGVPGWLAGVTVP*LLPPPAVLPEPMLA
Trigger: GGCCAGCATTGGCTCGGGCAATACCGCTGGTGGCGGCAGCAGCAATGGGACTGTTACTCCGGCCAGCCAGCCTGGCACACCCTCCCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CGCAGGTTGAAACGCCGCAGGTGGACCTCACGCAGCTaGGCCAAGGGGCGCCGGAAGTCATGGCCGATGCCT +
Preference number: 6 (lower is better)
Translates to: RRLKRRRWTSRS*AKGRRKSWPMP
Trigger: AGGCATCGGCCATGACTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGTCCACCTGCGGCGTTTCAACCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp AACGTGCACTGCACCCACCAGTGCTCTCAGAGCCAGTaGCACCTGCTGGGGGTCCTGAGCAGGGCCACGGCC +
Preference number: 6 (lower is better)
Translates to: NVHCTHQCSQSQ*HLLGVLSRATA
Trigger: GGCCGTGGCCCTGCTCAGGACCCCCAGCAGGTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTGCACGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCCTCCAGAGATGTGGGGCTTCCCCACCGAGTGTCCTaGGTGCCTGCGAGGGTAGAGCTGACGCTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PSRDVGLPHRVS*VPARVELTLPS
Trigger: GGAGGGCAGCGTCAGCTCTACCCTCGCAGGCACCCAGGACACTCGGTGGGGAAGCCCCACATCTCTGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp AGCGGGGAGGGTGTGCCAGGCTGGCTGGCCGGAGTAACAGTCCCATaGCTGCTGCCGCCACCAGCGGTATTGCCCGAGCCTGTCCCTACA +
Preference number: 6 (lower is better)
Translates to: SGEGVPGWLAGVTVP*LLPPPAVLPEPVPT
Trigger: TGTAGGGACAGGCTCGGGCAATACCGCTGGTGGCGGCAGCAGCAATGGGACTGTTACTCCGGCCAGCCAGCCTGGCACACCCTCCCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS GCA 72 bp GCAGCCTCGAGGACATACAGCCGCGTCAGCACATCCTaGCAGCCAGCTTGTCGGGCCAGCAGCCGAACGACG +
Preference number: 6 (lower is better)
Translates to: AASRTYSRVSTS*QPACRASSRTT
Trigger: CGTCGTTCGGCTGCTGGCCCGACAAGCTGGCTGGCAGGATGTGCTGACGCGGCTGTATGTCCTCGAGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000123996.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GCAGTCCCAGGGGCCCATATGCACGGTCCAGCAGCGTaGGGACCAGTGGCACCAACCACGAACAGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: AVPGAHMHGPAA*GPVAPTTNSAQ
Trigger: CTGAGCGCTGTTCGTGGTTGGTGCCACTGGTCCGCACGCTGCTGGACCGTGCATATGGGCCCCTGGGACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CCACGGCCCCAGCCCCGCACCACACCTAGCAGTCCCTaGACAGAGCCAGCACTCACAGCCATCTGCCCATTC +
Preference number: 6 (lower is better)
Translates to: PRPQPRTTPSSP*TEPALTAICPF
Trigger: GAATGGGCAGATGGCTGTGAGTGCTGGCTCTGTGCAGGGACTGCTAGGTGTGGTGCGGGGCTGGGGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GACACTCGACCCAGAGCTTGCAGCAAGGCTAACAGCTaGTCCTGGCAGCGGGCTCCCAGGGCTGTCCCCGTG +
Preference number: 6 (lower is better)
Translates to: DTRPRACSKANS*SWQRAPRAVPV
Trigger: CACGGGGACAGCCCTGGGAGCCCGCTGCCAGGAGCAGCTGTTAGCCTTGCTGCAAGCTCTGGGTCGAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GGTCGGCGCCCGGGCACATGCACAATGGCCACGCAGTaGCAGGCAGAATCCGCGAAGGACACTTCGGGCAAG +
Preference number: 6 (lower is better)
Translates to: GRRPGTCTMATQ*QAESAKDTSGK
Trigger: CTTGCCCGAAGTGTCCTTCGCGGATTCTGCCTGGCACTGCGTGGCCATTGTGCATGTGCCCGGGCGCCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CCGCTAGGGGGCGCTCGCGCTGCGGGCTGTAGTGCGTaGGCAGAGCATCGAGGAGGAACTGAACTCCGTACT +
Preference number: 6 (lower is better)
Translates to: PLGGARAAGCSA*AEHRGGTELRT
Trigger: AGTACGGAGTTCAGTTCCTCCTCGATGCTCTGCGCACGCACTACAGCCCGCAGCGCGAGCGCCCCCTAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CTCGGAAGACGAGGTGGTCAGCGCCCGACTGAGCGCTaGCTCCAGCTTGGAGAGCACGTAGCACGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LGRRGGQRPTER*LQLGEHVARLL
Trigger: GAGGAGGCGTGCTACGTGCTCTCCAAGCTGGAGGCAGCGCTCAGTCGGGCGCTGACCACCTCGTCTTCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp ATTGGAGAGACTGGAGCTGTGGCGGCCTTGGGCAGTTaGGAAGGGCCGTGGCCCATCCAGCGGGGAGGGTGT +
Preference number: 6 (lower is better)
Translates to: IGETGAVAALGS*EGPWPIQRGGC
Trigger: ACACCCTCCCCGCTGGATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTCCAGTCTCTCCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TCCAGCACATTGGAGAGACTGGAGCTGTGGCGGCCTTaGGCAGTTGGGAAGGGCCGTGGCCCATCCAGCGGG +
Preference number: 6 (lower is better)
Translates to: SSTLERLELWRP*AVGKGRGPSSG
Trigger: CCCGCTGGATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTCCAGTCTCTCCAATGTGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp GGTGTGCCAGGCTGGCTGGCCGGAGTAACAGTCCCATaGCTGCTGCCGCCACCAGCGGTATTGCCCGAGCCA +
Preference number: 6 (lower is better)
Translates to: GVPGWLAGVTVP*LLPPPAVLPEP
Trigger: TGGCTCGGGCAATACCGCTGGTGGCGGCAGCAGCAATGGGACTGTTACTCCGGCCAGCCAGCCTGGCACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp GGTGTGCCAGGCTGGCTGGCCGGAGTAACAGTCCCATaGCTGCTGCCGCCACCAGCGGTATTGCCCGAGCCT +
Preference number: 6 (lower is better)
Translates to: GVPGWLAGVTVP*LLPPPAVLPEP
Trigger: AGGCTCGGGCAATACCGCTGGTGGCGGCAGCAGCAATGGGACTGTTACTCCGGCCAGCCAGCCTGGCACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS TCA 72 bp AGGGTAGAGCTGGGGCCTGGGAGCCTGGCAAGGGGATaGCGCAGAGGACGCGGCCACCTTGTGTGGGAAGTT +
Preference number: 6 (lower is better)
Translates to: RVELGPGSLARG*RRGRGHLVWEV
Trigger: AACTTCCCACACAAGGTGGCCGCGTCCTCTGCGTCATCCCCTTGCCAGGCTCCCAGGCCCCAGCTCTACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp TGGCCGAACTGGGGACCTTGCGCAGGAGAGCCCCTATaGTGGCAGGACCCTGGCACTGCACCAGGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: WPNWGPCAGEPL*WQDPGTAPGSP
Trigger: AGGAGAGCCTGGTGCAGTGCCAGGGTCCTGCCATCATAGGGGCTCTCCTGCGCAAGGTCCCCAGTTCGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp GCTCAGTCTCGGAAGACGAGGTGGTCAGCGCCCGACTaGGCGCTGCCTCCAGCTTGGAGAGCACGTAGCACG +
Preference number: 6 (lower is better)
Translates to: AQSRKTRWSAPD*ALPPAWRARST
Trigger: CGTGCTACGTGCTCTCCAAGCTGGAGGCAGCGCTCAGTCGGGCGCTGACCACCTCGTCTTCCGAGACTGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GTCCCGAGGCACGAAGCATCTCCAGTGGGGAGCGGCTaGTTAGGTAGCCTTGGGTGGGTGGCCTTAGGCGCA +
Preference number: 6 (lower is better)
Translates to: VPRHEASPVGSG*LGSLGWVALGA
Trigger: TGCGCCTAAGGCCACCCACCCAAGGCTACCTAAGCAGCCGCTCCCCACTGGAGATGCTTCGTGCCTCGGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GGTCCTCGGGGTGGTGCTCGGCTAGCATGCAGAACGTaGACTGCACCCACCAGTGCTCTCAGAGCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: GPRGGARLACRT*TAPTSALRASG
Trigger: GCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CCACTGCGTTCCTCTCCATCCGGTCCTCTGAGGACTTaGCCAGGGGGAGAAGCAGGCCCTGAGTGTTGCGGC +
Preference number: 6 (lower is better)
Translates to: PLRSSPSGPLRT*PGGEAGPECCG
Trigger: GCCGCAACACTCAGGGCCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACCGGATGGAGAGGAACGCAGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TGCCGGTCAGAGCAGTCGAAGCGGCCGCTCTGTAGCTaGACATGCAGGGACGTGAAGGGCTCCACGCGGATG +
Preference number: 6 (lower is better)
Translates to: CRSEQSKRPLCS*TCRDVKGSTRM
Trigger: CATCCGCGTGGAGCCCTTCACGTCCCTGCATGTCCAGCTACAGAGCGGCCGCTTCGACTGCTCTGACCGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp GACATACAGCCGCGTCAGCACATCCTGCCAGCCAGCTaGTCGGGCCAGCAGCCGAACGACGTCTGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: DIQPRQHILPAS*SGQQPNDVWLS
Trigger: GGACAGCCAGACGTCGTTCGGCTGCTGGCCCGACAAGCTGGCTGGCAGGATGTGCTGACGCGGCTGTATGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000123996.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp TTCCAGCACATTGGAGAGACTGGAGCTGTGGCGGCCTaGGGCAGTTGGGAAGGGCCGTGGCCCATCCAGCGG +
Preference number: 6 (lower is better)
Translates to: FQHIGETGAVAA*GSWEGPWPIQR
Trigger: CCGCTGGATGGGCCACGGCCCTTCCCAACTGCCCAAGGCCGCCACAGCTCCAGTCTCTCCAATGTGCTGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp GGGCTGCCGGCCCACGGGGGCAGCACCACATCACCCACCTTCTCGTaGGTCAACTGGAGGCAGCCCAGGTCAAAGCCATTCTGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: GLPAHGGSTTSPTFS*VNWRQPRSKPFWFS
Trigger: GGAGAACCAGAATGGCTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGATGTGGTGCTGCCCCCGTGGGCCGGCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp CATACTCTGACTCCAGAGCCTGGCGGTGTTTCTGGATaGAATCCTCGGGGCTGCCGGCCCACGGGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: HTLTPEPGGVSG*NPRGCRPTGAA
Trigger: TGCTGCCCCCGTGGGCCGGCAGCCCCGAGGATTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGAGTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp TCCTCTGAGGACTTGCCCAGGGGGAGAAGCAGGCCCTaGGTGTTGCGGCCTGAGGTCAGCTCAGGTCCTACG +
Preference number: 6 (lower is better)
Translates to: SSEDLPRGRSRP*VLRPEVSSGPT
Trigger: CGTAGGACCTGAGCTGACCTCAGGCCGCAACACTCAGGGCCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CGTCGAGTGCTGCGCTGCCTGCTGCTTCAGTACAGATaGATAGCGCAATCCCTCCACGCGAGCCCTGCGCTG +
Preference number: 6 (lower is better)
Translates to: RRVLRCLLLQYR*IAQSLHASPAL
Trigger: CAGCGCAGGGCTCGCGTGGAGGGATTGCGCTATGCATCTGTACTGAAGCAGCAGGCAGCGCAGCACTCGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp TCGGCTAGCATGCAGAACGTGCACTGCACCCACCAGTaGTCTCAGAGCCAGTGGCACCTGCTGGGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: SASMQNVHCTHQ*SQSQWHLLGVL
Trigger: CAGGACCCCCAGCAGGTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp TCGGGGTGGTGCTCGGCTAGCATGCAGAACGTGCACTaGACCCACCAGTGCTCTCAGAGCCAGTGGCACCTG +
Preference number: 6 (lower is better)
Translates to: SGWCSASMQNVH*THQCSQSQWHL
Trigger: CAGGTGCCACTGGCTCTGAGAGCACTGGTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp ACAGGTAGCCCACCAGGCCTGCTTGCACACAGGTGGTaGGACTGGCAGGGCAGCTGTCACAGAGCCACCAGA +
Preference number: 6 (lower is better)
Translates to: TGSPPGLLAHRW*DWQGSCHRATR
Trigger: TCTGGTGGCTCTGTGACAGCTGCCCTGCCAGTCGCACCACCTGTGTGCAAGCAGGCCTGGTGGGCTACCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TGGGGCCTGGGAGGAAGCGTGGGGGACTACTGTCTGTaGCAGCCTCGAGGACATACAGCCGCGTCAGCACAT +
Preference number: 6 (lower is better)
Translates to: WGLGGSVGDYCL*QPRGHTAASAH
Trigger: ATGTGCTGACGCGGCTGTATGTCCTCGAGGCTGCCACAGACAGTAGTCCCCCACGCTTCCTCCCAGGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123996.2
CDS CCA 72 bp ACCTCACGCAGCTGGGCCAAGGGGCGCCGGAAGTCATaGCCGATGCCTTCCTCTGTTTCCACGCGTTCCGTA +
Preference number: 6 (lower is better)
Translates to: TSRSWAKGRRKS*PMPSSVSTRSV
Trigger: TACGGAACGCGTGGAAACAGAGGAAGGCATCGGCCATGACTTCCGGCGCCCCTTGGCCCAGCTGCGTGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp GACACATACTCTGACTCCAGAGCCTGGCGGTGTTTCTaGATGAAATCCTCGGGGCTGCCGGCCCACGGGGGC +
Preference number: 6 (lower is better)
Translates to: DTYSDSRAWRCF*MKSSGLPAHGG
Trigger: GCCCCCGTGGGCCGGCAGCCCCGAGGATTTCATCCAGAAACACCGCCAGGCTCTGGAGTCAGAGTATGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp GAGGCGATTGGCTGCTTCCTCAGCCGAGAGCCGGGGTaGGTGTGGCTCCTTCAGCAGCTGACAAGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: EAIGCFLSREPG*VWLLQQLTRSL
Trigger: CAGACTCCTTGTCAGCTGCTGAAGGAGCCACACCCACCCCGGCTCTCGGCTGAGGAAGCAGCCAATCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TCGCCAGGATTGTATTCAGTCTCCCCAGAGGACACCTaGGAGATTCGCCGCGAGGAGCGCCACAGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: SPGLYSVSPEDT*EIRREERHSLR
Trigger: GCGGAGGCTGTGGCGCTCCTCGCGGCGAATCTCCCAGGTGTCCTCTGGGGAGACTGAATACAATCCTGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp ATGCTTGGTGAGTTAGTGTCCAGCCGGGCGAGGCGATaGGCTGCTTCCTCAGCCGAGAGCCGGGGTGGGTGT +
Preference number: 6 (lower is better)
Translates to: MLGELVSSRARR*AASSAESRGGC
Trigger: ACACCCACCCCGGCTCTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGCTGGACACTAACTCACCAAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp AGCCTCGAGGACATACAGCCGCGTCAGCACATCCTGCCAGCCAGCTaGTCGGGCCAGCAGCCGAACGACGTCTGGCTGTCCGTAGATGAG +
Preference number: 6 (lower is better)
Translates to: SLEDIQPRQHILPAS*SGQQPNDVWLSVDE
Trigger: CTCATCTACGGACAGCCAGACGTCGTTCGGCTGCTGGCCCGACAAGCTGGCTGGCAGGATGTGCTGACGCGGCTGTATGTCCTCGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000123996.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp TTCTGGAAGATGCTTGGTGAGTTAGTGTCCAGCCGGGCGAGGCGATaGGCTGCTTCCTCAGCCGAGAGCCGGGGTGGGTGTGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: FWKMLGELVSSRARR*AASSAESRGGCGSF
Trigger: GAAGGAGCCACACCCACCCCGGCTCTCGGCTGAGGAAGCAGCCAATCGCCTCGCCCGGCTGGACACTAACTCACCAAGCATCTTCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp CTGGCCGGAGTAACAGTCCCATTGCTGCTGCCGCCACCAGCGGTATaGCCCGAGCCAATGCTGGCCCGTTCCAAACCCAGGTCAAAGGGT +
Preference number: 6 (lower is better)
Translates to: LAGVTVPLLLPPPAV*PEPMLARSKPRSKG
Trigger: ACCCTTTGACCTGGGTTTGGAACGGGCCAGCATTGGCTCGGGCAATACCGCTGGTGGCGGCAGCAGCAATGGGACTGTTACTCCGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp AAAGGCAGCCACTGCGTTCCTCTCCATCCGGTCCTCTaGGGACTTGCCCAGGGGGAGAAGCAGGCCCTGAGT +
Preference number: 6 (lower is better)
Translates to: KGSHCVPLHPVL*GLAQGEKQALS
Trigger: ACTCAGGGCCTGCTTCTCCCCCTGGGCAAGTCCTCAGAGGACCGGATGGAGAGGAACGCAGTGGCTGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp AGGAAGGCGGCCAAGGGGTCTTGCACTGGAGAACCCTaGAGCAGGGTTAGCAACAGCTCCAGGGTGCCCACC +
Preference number: 6 (lower is better)
Translates to: RKAAKGSCTGEP*SRVSNSSRVPT
Trigger: GGTGGGCACCCTGGAGCTGTTGCTAACCCTGCTTCAGGGTTCTCCAGTGCAAGACCCCTTGGCCGCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp AGGGACTCCAGTGCAGCCAGGTCCTCTTCCCCTAACTaGTCCTCAGGCAGCTCCTCCGGAGGGGCACTGATT +
Preference number: 6 (lower is better)
Translates to: RDSSAARSSSPN*SSGSSSGGALI
Trigger: AATCAGTGCCCCTCCGGAGGAGCTGCCTGAGGAGCAGTTAGGGGAAGAGGACCTGGCTGCACTGGAGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CTCAAGCAGGGTACGCAGTTCTGGTCCTCGGGGTGGTaGTCGGCTAGCATGCAGAACGTGCACTGCACCCAC +
Preference number: 6 (lower is better)
Translates to: LKQGTQFWSSGW*SASMQNVHCTH
Trigger: GTGGGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAACTGCGTACCCTGCTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp AGCTCCAAGGGCCGTAGTGACACTCGACCCAGAGCTTaGAGCAAGGCTAACAGCTGCTCCTGGCAGCGGGCT +
Preference number: 6 (lower is better)
Translates to: SSKGRSDTRPRA*SKANSCSWQRA
Trigger: AGCCCGCTGCCAGGAGCAGCTGTTAGCCTTGCTGCAAGCTCTGGGTCGAGTGTCACTACGGCCCTTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CAGCCACTCGCTCCAGCAAGGGCAGCAGAACACCCATaGCCCCTACGCAGTTCACCACATCCTTCACGTCCC +
Preference number: 6 (lower is better)
Translates to: QPLAPARAAEHP*PLRSSPHPSRP
Trigger: GGGACGTGAAGGATGTGGTGAACTGCGTAGGGGGCATGGGTGTTCTGCTGCCCTTGCTGGAGCGAGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp ACCCTCAAGCAGGGTACGCAGTTCTGGTCCTCGGGGTaGTGCTCGGCTAGCATGCAGAACGTGCACTGCACC +
Preference number: 6 (lower is better)
Translates to: TLKQGTQFWSSG*CSASMQNVHCT
Trigger: GGTGCAGTGCACGTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAACTGCGTACCCTGCTTGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCACTGCTGGTGAAGAAGCTGTACAGTTGTTTCCGCTaGAGGGGCCGGCTGGGAGCTGAGGTAGGAACCGCC +
Preference number: 6 (lower is better)
Translates to: PLLVKKLYSCFR*RGRLGAEVGTA
Trigger: GGCGGTTCCTACCTCAGCTCCCAGCCGGCCCCTCCAGCGGAAACAACTGTACAGCTTCTTCACCAGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp AGACCCTGGAGACCACAGTCGTGCAGCCGTATCCTCTaGCGGTTCCGCTCGGGTAACCGCTCATTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RPWRPQSCSRIL*RFRSGNRSFCC
Trigger: GCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGATACGGCTGCACGACTGTGGTCTCCAGGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp GCAGCTCTGGGAGGAAGCGTGGGGGACTACTGTCTGTaGCAGCCTCGAGGACATACAGCCGCGTCAGCACAT +
Preference number: 6 (lower is better)
Translates to: AALGGSVGDYCL*QPRGHTAASAH
Trigger: ATGTGCTGACGCGGCTGTATGTCCTCGAGGCTGCCACAGACAGTAGTCCCCCACGCTTCCTCCCAGAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp GCCCACGGGGGCAGCACCACATCACCCACCTTCTCGTaGGTCAACTGGAGGCAGCCCAGGTCAAAGCCATTC +
Preference number: 6 (lower is better)
Translates to: AHGGSTTSPTFS*VNWRQPRSKPF
Trigger: GAATGGCTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGATGTGGTGCTGCCCCCGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp GTAACAGTCCCATTGCTGCTGCCGCCACCAGCGGTATaGCCCGAGCCAATGCTGGCCCGTTCCAAACCCAGG +
Preference number: 6 (lower is better)
Translates to: VTVPLLLPPPAV*PEPMLARSKPR
Trigger: CCTGGGTTTGGAACGGGCCAGCATTGGCTCGGGCAATACCGCTGGTGGCGGCAGCAGCAATGGGACTGTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp CCGATCTGCGCCATCTCCCGGAGATCTGCTGTGCTATaGGCGAGATGTGGCCAGGCTCCCAGGCGATCAAGC +
Preference number: 6 (lower is better)
Translates to: PICAISRRSAVL*ARCGQAPRRSS
Trigger: GCTTGATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGCACAGCAGATCTCCGGGAGATGGCGCAGATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp TCCGCACTGCCCTCCACGCCCCGCCACGTCACTGAGAATAGCACGTaGGTGAGTAAGTTGCACAGCTCCTCTTCAGGGGTTTGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: SALPSTPRHVTENST*VSKLHSSSSGVCWG
Trigger: CCCCCAGCAAACCCCTGAAGAGGAGCTGTGCAACTTACTCACCAACGTGCTATTCTCAGTGACGTGGCGGGGCGTGGAGGGCAGTGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp GGATACGGTCCCGCTGATGCCGCTGCCCGCTGCTCATaGGTGTGTCGTAGCAGGCATTCCAGAAGCCTGACA +
Preference number: 6 (lower is better)
Translates to: GYGPADAAARCS*VCRSRHSRSLT
Trigger: TGTCAGGCTTCTGGAATGCCTGCTACGACACACTCATGAGCAGCGGGCAGCGGCATCAGCGGGACCGTATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp AGAGCACTGAGCGGTGCCCAGCAGAACAAAGTCTTCTaGCACAGTCAGGGCTGTGGGCTGCTCCGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: RALSGAQQNKVF*HSQGCGLLRQG
Trigger: ACCCTGACGGAGCAGCCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CTGTGGTCACCCTCCACAGCCATGTTGAGCAATTCCTaGAACAGCCTGTGGGTAGGGGGTCCGTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LWSPSTAMLSNS*NSLWVGGPWLC
Trigger: GCAGAGCCACGGACCCCCTACCCACAGGCTGTTGCAGGAATTGCTCAACATGGCTGTGGAGGGTGACCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GACGCGGGAAGCCCTGTGGTGGTTGTCGTTGTGCGGTaGCCAGCAGAACCAATACAGCAGGAGGAGAAAGGC +
Preference number: 6 (lower is better)
Translates to: DAGSPVVVVVVR*PAEPIQQEEKG
Trigger: GCCTTTCTCCTCCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GTAAGCCGATCTGCGCCATCTCCCGGAGATCTGCTGTaGTATTGGCGAGATGTGGCCAGGCTCCCAGGCGAT +
Preference number: 6 (lower is better)
Translates to: VSRSAPSPGDLL*YWRDVARLPGD
Trigger: ATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGCACAGCAGATCTCCGGGAGATGGCGCAGATCGGCTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCAGCCAGCTTGTCGGGCCAGCAGCCGAACGACGTCTaGCTGTCCGTAGATGAGGTAAAAGAGCTGACGGCA +
Preference number: 6 (lower is better)
Translates to: PASLSGQQPNDV*LSVDEVKELTA
Trigger: TGCCGTCAGCTCTTTTACCTCATCTACGGACAGCCAGACGTCGTTCGGCTGCTGGCCCGACAAGCTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000123996.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCTGGAAGTCCTCAAAGAAGGTGGGGCTTCCATTGGTaGGTGGTAAGGAGGGCAGCCCCCACTGCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: PGSPQRRWGFHW*VVRRAAPTAVP
Trigger: TGGGACTGCAGTGGGGGCTGCCCTCCTTACCACCCACCAATGGAAGCCCCACCTTCTTTGAGGACTTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCCACGGGGGCAGCACCACATCACCCACCTTCTCGTTaGTCAACTGGAGGCAGCCCAGGTCAAAGCCATTCT +
Preference number: 6 (lower is better)
Translates to: PTGAAPHHPPSR*STGGSPGQSHS
Trigger: AGAATGGCTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGATGTGGTGCTGCCCCCGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCAGCAGAACAAAGTCTTCTGCCACAGTCAGGGCTGTaGGCTGCTCCGTCAGGGTCACTGAAGCCCGCAACC +
Preference number: 6 (lower is better)
Translates to: PAEQSLLPQSGL*AAPSGSLKPAT
Trigger: GGTTGCGGGCTTCAGTGACCCTGACGGAGCAGCCCACAGCCCTGACTGTGGCAGAAGACTTTGTTCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCTTGGTCACAGACACACTGTGGACCGGCACTTTCATaGGCAGGGGAGGCACGGCGGGCCGCAATTTGTTCA +
Preference number: 6 (lower is better)
Translates to: PWSQTHCGPALS*AGEARRAAICS
Trigger: TGAACAAATTGCGGCCCGCCGTGCCTCCCCTGCCCATGAAAGTGCCGGTCCACAGTGTGTCTGTGACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CACCAGCACTGGCTGCTCGTTGCGGATTGGTGGAGGTaGGTGCATGCTGTGGTCACCCTCCACAGCCATGTT +
Preference number: 6 (lower is better)
Translates to: HQHWLLVADWWR*VHAVVTLHSHV
Trigger: AACATGGCTGTGGAGGGTGACCACAGCATGCACCCACCTCCACCAATCCGCAACGAGCAGCCAGTGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCAAGGCTGTGGAGACTGATGACGCGGGAAGCCCTGTaGTGGTTGTCGTTGTGCGGTGCCCAGCAGAACCAA +
Preference number: 6 (lower is better)
Translates to: PRLWRLMTREAL*WLSLCGAQQNQ
Trigger: TTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTCCACAGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp TGCTCCTCAGGCAGCTCCTCCGGAGGGGCACTGATTTaGGCCTCTTTGGTCACTGCCAGAGGCAGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: CSSGSSSGGALI*ASLVTARGSEV
Trigger: GACCTCACTGCCTCTGGCAGTGACCAAAGAGGCCAAAATCAGTGCCCCTCCGGAGGAGCTGCCTGAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp TGCTCCTCAGGCAGCTCCTCCGGAGGGGCACTGATTTTGGCCTCTTaGGTCACTGCCAGAGGCAGTGAGGTCTCCTCAGTGGGTGTCATG +
Preference number: 6 (lower is better)
Translates to: CSSGSSSGGALILAS*VTARGSEVSSVGVM
Trigger: CATGACACCCACTGAGGAGACCTCACTGCCTCTGGCAGTGACCAAAGAGGCCAAAATCAGTGCCCCTCCGGAGGAGCTGCCTGAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp TCCCCTAACTGCTCCTCAGGCAGCTCCTCCGGAGGGGCACTGATTTaGGCCTCTTTGGTCACTGCCAGAGGCAGTGAGGTCTCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: SPNCSSGSSSGGALI*ASLVTARGSEVSSV
Trigger: CACTGAGGAGACCTCACTGCCTCTGGCAGTGACCAAAGAGGCCAAAATCAGTGCCCCTCCGGAGGAGCTGCCTGAGGAGCAGTTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp TCACAGGGCAAGGCGGCCGGAGGGAACTTGTATTTGCTCTTCTCCTaGGAGCTGATGACTTCCCCAGTGAGCTGGCGCCGCCAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: SQGKAAGGNLYLLFS*ELMTSPVSWRRQVW
Trigger: CCAGACTTGGCGGCGCCAGCTCACTGGGGAAGTCATCAGCTCCAAGGAGAAGAGCAAATACAAGTTCCCTCCGGCCGCCTTGCCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp GAGCCAAGGCTGTGGAGACTGATGACGCGGGAAGCCCTGTGGTGGTaGTCGTTGTGCGGTGCCCAGCAGAACCAATACAGCAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: EPRLWRLMTREALWW*SLCGAQQNQYSRRR
Trigger: TCTCCTCCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTCCACAGCCTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp AGACGTAAGCCGATCTGCGCCATCTCCCGGAGATCTGCTGTGCTATaGGCGAGATGTGGCCAGGCTCCCAGGCGATCAAGCAGGTTGCAC +
Preference number: 6 (lower is better)
Translates to: RRKPICAISRRSAVL*ARCGQAPRRSSRLH
Trigger: GTGCAACCTGCTTGATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGCACAGCAGATCTCCGGGAGATGGCGCAGATCGGCTTACGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp GGGCCAGCAGCCGAACGACGTCTGGCTGTCCGTAGATaGGGTAAAAGAGCTGACGGCAGATGTCTAGGCGGA +
Preference number: 6 (lower is better)
Translates to: GPAAERRLAVRR*GKRADGRCLGG
Trigger: TCCGCCTAGACATCTGCCGTCAGCTCTTTTACCTCATCTACGGACAGCCAGACGTCGTTCGGCTGCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000123996.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GATGATGCCTTCCAGAGCCTTCCGCTCCCGTTCATCTaGCACGTGGTCCAGGTCAACCGCCCCTTCGTAAGT +
Preference number: 6 (lower is better)
Translates to: DDAFQSLPLPFI*HVVQVNRPFVS
Trigger: ACTTACGAAGGGGCGGTTGACCTGGACCACGTGGCAGATGAACGGGAGCGGAAGGCTCTGGAAGGCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CCTCAGAAGGCTGCCCAGCGCCCACAACGATCAATTTaGCATCTTCCAGGCCCACCAGCACATGACTGCGCT +
Preference number: 6 (lower is better)
Translates to: PQKAAQRPQRSI*HLPGPPAHDCA
Trigger: AGCGCAGTCATGTGCTGGTGGGCCTGGAAGATGGCAAATTGATCGTTGTGGGCGCTGGGCAGCCTTCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp AGCAGTCCCTGCACAGAGCCAGCACTCACAGCCATCTaGCCATTCGCCTTTCCTCCTGCAAGGATGGCACCA +
Preference number: 6 (lower is better)
Translates to: SSPCTEPALTAI*PFAFPPARMAP
Trigger: TGGTGCCATCCTTGCAGGAGGAAAGGCGAATGGGCAGATGGCTGTGAGTGCTGGCTCTGTGCAGGGACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GAGCCACTCATGATGCAGGTCAGCACTCTGACCACGTaGACTGCGATGGCATCGGTGTCCTGGTCAAGCACC +
Preference number: 6 (lower is better)
Translates to: EPLMMQVSTLTT*TAMASVSWSST
Trigger: GGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCATCATGAGTGGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CTGATGACGCGGGAAGCCCTGTGGTGGTTGTCGTTGTaGGGTGCCCAGCAGAACCAATACAGCAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: LMTREALWWLSL*GAQQNQYSRRR
Trigger: TCTCCTCCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CTCTGGCGGTTCCGCTCGGGTAACCGCTCATTCTGCTaGAGTCTTCGCAAGATCTTGCAGACCCTGTCGGTC +
Preference number: 6 (lower is better)
Translates to: LWRFRSGNRSFC*SLRKILQTLSV
Trigger: GACCGACAGGGTCTGCAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GACAAGCTAGCAACAAGACCCTGGAGACCACAGTCGTaGAGCCGTATCCTCTGGCGGTTCCGCTCGGGTAAC +
Preference number: 6 (lower is better)
Translates to: DKLATRPWRPQS*SRILWRFRSGN
Trigger: GTTACCCGAGCGGAACCGCCAGAGGATACGGCTGCACGACTGTGGTCTCCAGGGTCTTGTTGCTAGCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CTCTGGCGGTTCCGCTCGGGTAACCGCTCATTCTGCTaGAGTCTTCGCAAGATCTGGCCATCGTCACCGGTA +
Preference number: 6 (lower is better)
Translates to: LWRFRSGNRSFC*SLRKIWPSSPV
Trigger: TACCGGTGACGATGGCCAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS GCA 72 bp ATCCTCTGGCGGTTCCGCTCGGGTAACCGCTCATTCTaGTGCAGTCTTCGCAAGATCTGGCCATCGTCACCG +
Preference number: 6 (lower is better)
Translates to: ILWRFRSGNRSF*CSLRKIWPSSP
Trigger: CGGTGACGATGGCCAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS CCA 72 bp TCTCCAGTGGGGAGCGGCTGCTTAGGTAGCCTTGGGTaGGTGGCCTTAGGCGCAGAAGCAATGAGTACACCT +
Preference number: 6 (lower is better)
Translates to: SPVGSGCLGSLG*VALGAEAMSTP
Trigger: AGGTGTACTCATTGCTTCTGCGCCTAAGGCCACCCACCCAAGGCTACCTAAGCAGCCGCTCCCCACTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp AGGCTGTGGAGACTGATGACGCGGGAAGCCCTGTGGTaGTTGTCGTTGTGCGGTGCCCAGCAGAACCAATAC +
Preference number: 6 (lower is better)
Translates to: RLWRLMTREALW*LSLCGAQQNQY
Trigger: GTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTCCACAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CCACCGCCATCAGCAGCCGCCTGCTCCATCAGCAGCTaGGCAGACATGAGCACATTCATATCCATGGCCGAA +
Preference number: 6 (lower is better)
Translates to: PPPSAAACSISS*ADMSTFISMAE
Trigger: TTCGGCCATGGATATGAATGTGCTCATGTCTGCCCAGCTGCTGATGGAGCAGGCGGCTGCTGATGGCGGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CATCTCCCGGAGATCTGCTGTGCTATTGGCGAGATGTaGCCAGGCTCCCAGGCGATCAAGCAGGTTGCACAC +
Preference number: 6 (lower is better)
Translates to: HLPEICCAIGEM*PGSQAIKQVAH
Trigger: GTGTGCAACCTGCTTGATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGCACAGCAGATCTCCGGGAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp AAGGCGGCCGGAGGGAACTTGTATTTGCTCTTCTCCTaGGAGCTGATGACTTCCCCAGTGAGCTGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: KAAGGNLYLLFS*ELMTSPVSWRR
Trigger: GCGGCGCCAGCTCACTGGGGAAGTCATCAGCTCCAAGGAGAAGAGCAAATACAAGTTCCCTCCGGCCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp AGACTGATGACGCGGGAAGCCCTGTGGTGGTTGTCGTaGTGCGGTGCCCAGCAGAACCAATACAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: RLMTREALWWLS*CGAQQNQYSRR
Trigger: CCTCCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp CTGTGGAGACTGATGACGCGGGAAGCCCTGTGGTGGTaGTCGTTGTGCGGTGCCCAGCAGAACCAATACAGC +
Preference number: 6 (lower is better)
Translates to: LWRLMTREALWW*SLCGAQQNQYS
Trigger: GCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp CACAGCTCACTGCAGCTACATGTCCGTATAAGACCTGCACAGGCTTaGGTGCCAGCCCTGCTGACAGACCGCTCTGCTGCAGAAGACGCC +
Preference number: 6 (lower is better)
Translates to: HSSLQLHVRIRPAQA*VPALLTDRSAAEDA
Trigger: GGCGTCTTCTGCAGCAGAGCGGTCTGTCAGCAGGGCTGGCACCAAAGCCTGTGCAGGTCTTATACGGACATGTAGCTGCAGTGAGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp AGGCTGTGGAGACTGATGACGCGGGAAGCCCTGTGGTGGTTGTCGTaGTGCGGTGCCCAGCAGAACCAATACAGCAGGAGGAGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: RLWRLMTREALWWLS*CGAQQNQYSRRRKA
Trigger: AGCCTTTCTCCTCCTGCTGTATTGGTTCTGCTGGGCACCGCACAACGACAACCACCACAGGGCTTCCCGCGTCATCAGTCTCCACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp GCAGTCTTCGCAAGATCTTGCAGACCCTGTCGGTCAAAAGGGGCGTaGACTTTGGCCGCACCAGCAGTGCGAGCAGCACCTCAAGGTTCC +
Preference number: 6 (lower is better)
Translates to: AVFARSCRPCRSKGA*TLAAPAVRAAPQGS
Trigger: GGAACCTTGAGGTGCTGCTCGCACTGCTGGTGCGGCCAAAGTCAACGCCCCTTTTGACCGACAGGGTCTGCAAGATCTTGCGAAGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp CCAAACTCATGTAGTTCACCCTCAGGCTTGAAGGGTGCTGGCTCATaGGGCCCCAGGCTACACAGGACCCTTAGGGCAGATGGTTGCAGG +
Preference number: 6 (lower is better)
Translates to: PNSCSSPSGLKGAGS*GPRLHRTLRADGCR
Trigger: CCTGCAACCATCTGCCCTAAGGGTCCTGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAACTACATGAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp TTCCGCTCGGGTAACCGCTCATTCTGCTGCAGTCTTCGCAAGATCTaGCAGACCCTGTCGGTCAAAAGGGGCGTTGACTTTGGCCGCACC +
Preference number: 6 (lower is better)
Translates to: FRSGNRSFCCSLRKI*QTLSVKRGVDFGRT
Trigger: GGTGCGGCCAAAGTCAACGCCCCTTTTGACCGACAGGGTCTGCAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp GGCCTTGAGTTGGTTGAGGTTCTGGAAGATGCTTGGTaGGTTAGTGTCCAGCCGGGCGAGGCGATTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GLELVEVLEDAW*VSVQPGEAIGC
Trigger: GCAGCCAATCGCCTCGCCCGGCTGGACACTAACTCACCAAGCATCTTCCAGAACCTCAACCAACTCAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp CCTGTGAGGATCCTTTCAGCTCAGCCATCAATACAGTaGGCAACGCCAGCACACGGGGCACCAGTACCTGGC +
Preference number: 6 (lower is better)
Translates to: PVRILSAQPSIQ*ATPAHGAPVPG
Trigger: GCCAGGTACTGGTGCCCCGTGTGCTGGCGTTGCTCACTGTATTGATGGCTGAGCTGAAAGGATCCTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp ATCCTCTGGCGGTTCCGCTCGGGTAACCGCTCATTCTaGTGCAGTCTTCGCAAGATCTTGCAGACCCTGTCG +
Preference number: 6 (lower is better)
Translates to: ILWRFRSGNRSF*CSLRKILQTLS
Trigger: CGACAGGGTCTGCAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACCCGAGCGGAACCGCCAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp GGCAGCACCACATCACCCACCTTCTCGTTGGTCAACTaGAGGCAGCCCAGGTCAAAGCCATTCTGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: GSTTSPTFSLVN*RQPRSKPFWFS
Trigger: GGAGAACCAGAATGGCTTTGACCTGGGCTGCCTCCAGTTGACCAACGAGAAGGTGGGTGATGTGGTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TTCGCCTTTCCTCCTGCAAGGATGGCACCAAAGAGGTaGATGAGCCGCAACAGCAACGTGGGAGGCAAACGC +
Preference number: 6 (lower is better)
Translates to: FAFPPARMAPKR*MSRNSNVGGKR
Trigger: GCGTTTGCCTCCCACGTTGCTGTTGCGGCTCATCCACCTCTTTGGTGCCATCCTTGCAGGAGGAAAGGCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp ACTGCGATGGCATCGGTGTCCTGGTCAAGCACCTTCTaGACATCGGGCTCAGTCAGTAACCAGGTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: TAMASVSWSSTF*TSGSVSNQVAR
Trigger: CCTGGCTACCTGGTTACTGACTGAGCCCGATGTCCAGAAGGTGCTTGACCAGGACACCGATGCCATCGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS CCA 72 bp ACTCTGACCACGTGCACTGCGATGGCATCGGTGTCCTaGTCAAGCACCTTCTGGACATCGGGCTCAGTCAGT +
Preference number: 6 (lower is better)
Translates to: TLTTCTAMASVS*SSTFWTSGSVS
Trigger: ACTGACTGAGCCCGATGTCCAGAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS CCA 72 bp CATAGGGCAGCCAGGTATGAGTGCCCAGCAGCCCACTaGCACTTACAGTCACCAACATGTCCGAGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: HRAARYECPAAH*HLQSPTCPRSS
Trigger: AGAGCTCCTCGGACATGTTGGTGACTGTAAGTGCCAGTGGGCTGCTGGGCACTCATACCTGGCTGCCCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp CTGCAGCTACATGTCCGTATAAGACCTGCACAGGCTTaGGTGCCAGCCCTGCTGACAGACCGCTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LQLHVRIRPAQA*VPALLTDRSAA
Trigger: TGCAGCAGAGCGGTCTGTCAGCAGGGCTGGCACCAAAGCCTGTGCAGGTCTTATACGGACATGTAGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp TGTAGTTCACCCTCAGGCTTGAAGGGTGCTGGCTCATaGGGCCCCAGGCTACACAGGACCCTTAGGGCAGAT +
Preference number: 6 (lower is better)
Translates to: CSSPSGLKGAGS*GPRLHRTLRAD
Trigger: ATCTGCCCTAAGGGTCCTGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp ATGAGCACATTCATATCCATGGCCGAACTGGGGACCTaGCGCAGGAGAGCCCCTATGATGGCAGGACCCTGG +
Preference number: 6 (lower is better)
Translates to: MSTFISMAELGT*RRRAPMMAGPW
Trigger: CCAGGGTCCTGCCATCATAGGGGCTCTCCTGCGCAAGGTCCCCAGTTCGGCCATGGATATGAATGTGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp GCGAGATGTGGCCAGGCTCCCAGGCGATCAAGCAGGTaGCACACACCTTCAAAGAGCTTCTCACTCCACAGC +
Preference number: 6 (lower is better)
Translates to: ARCGQAPRRSSR*HTPSKSFSLHS
Trigger: GCTGTGGAGTGAGAAGCTCTTTGAAGGTGTGTGCAACCTGCTTGATCGCCTGGGAGCCTGGCCACATCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp TCCCTCACAAGCTGGGCATGCTTGGGATTCACCACACCGATGGGTTaGGACAGGTCCCGGAAGACAGCTGGATTGCTGAGGTCCAAGACT +
Preference number: 6 (lower is better)
Translates to: SLTSWACLGFTTPMG*DRSRKTAGLLRSKT
Trigger: AGTCTTGGACCTCAGCAATCCAGCTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp TGGAGGAGCAACTTGGTGCCAAACTCATGTAGTTCACCCTCAGGCTaGAAGGGTGCTGGCTCATTGGGCCCCAGGCTACACAGGACCCTT +
Preference number: 6 (lower is better)
Translates to: WRSNLVPNSCSSPSG*KGAGSLGPRLHRTL
Trigger: AAGGGTCCTGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAACTACATGAGTTTGGCACCAAGTTGCTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp GGTAAAAGAGCTGACGGCAGATGTCTAGGCGGACACTaGGGTCAGCCTGGAGGGACAGCTGTACAACAGCCA +
Preference number: 6 (lower is better)
Translates to: GKRADGRCLGGH*GQPGGTAVQQP
Trigger: TGGCTGTTGTACAGCTGTCCCTCCAGGCTGACCTCAGTGTCCGCCTAGACATCTGCCGTCAGCTCTTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000123996.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp AAGTCACTCGTAGGCTGCCATCCCAGTGGCCACCACTaGAGAGCAGCTTTCCGTCAGGAGCTACTGCTAGTG +
Preference number: 6 (lower is better)
Translates to: KSLVGCHPSGHH*RAAFRQELLLV
Trigger: CACTAGCAGTAGCTCCTGACGGAAAGCTGCTCTTCAGTGGTGGCCACTGGGATGGCAGCCTACGAGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp CCTCGGATCCAGACACGGCCATGTCAAGTTCAGTGCTaGTGGCCACACAGCTCACTGCAGCTACATGTCCGT +
Preference number: 6 (lower is better)
Translates to: PRIQTRPCQVQC*WPHSSLQLHVR
Trigger: ACGGACATGTAGCTGCAGTGAGCTGTGTGGCCATCAGCACTGAACTTGACATGGCCGTGTCTGGATCCGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp CCACGCCCCGCCACGTCACTGAGAATAGCACGTTGGTaGGTAAGTTGCACAGCTCCTCTTCAGGGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: PRPATSLRIARW*VSCTAPLQGFA
Trigger: AGCAAACCCCTGAAGAGGAGCTGTGCAACTTACTCACCAACGTGCTATTCTCAGTGACGTGGCGGGGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp GGGCTGACTCTAACATCATCTCTAGGAGGCTGCGCTTaGTGCAGTCTGGTGGTCGCACAAGTGTGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GLTLTSSLGGCA*CSLVVAQVWQR
Trigger: CCTCTGCCACACTTGTGCGACCACCAGACTGCATCAAGCGCAGCCTCCTAGAGATGATGTTAGAGTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GGGCTCCACGCGGATGAGGTAGTGCATCACGCCCGCTaGGTTAGAATAGTGTGTGCCATAGTGGAACTTGTC +
Preference number: 6 (lower is better)
Translates to: GLHADEVVHHAR*VRIVCAIVELV
Trigger: GACAAGTTCCACTATGGCACACACTATTCTAACGCAGCGGGCGTGATGCACTACCTCATCCGCGTGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp ACTCATGATGCAGGTCAGCACTCTGACCACGTGCACTaGGATGGCATCGGTGTCCTGGTCAAGCACCTTCTG +
Preference number: 6 (lower is better)
Translates to: THDAGQHSDHVH*DGIGVLVKHLL
Trigger: CAGAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCATCATGAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
CDS GCA 72 bp CGAGATGTGGCCAGGCTCCCAGGCGATCAAGCAGGTTaGACACACCTTCAAAGAGCTTCTCACTCCACAGCT +
Preference number: 6 (lower is better)
Translates to: RDVARLPGDQAG*THLQRASHSTA
Trigger: AGCTGTGGAGTGAGAAGCTCTTTGAAGGTGTGTGCAACCTGCTTGATCGCCTGGGAGCCTGGCCACATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp ACTCATGATGCAGGTCAGCACTCTGACCACGTGCACTaGGATGGCATCGGTGTCCTGGTCAAGCACCTTGCT +
Preference number: 6 (lower is better)
Translates to: THDAGQHSDHVH*DGIGVLVKHLA
Trigger: AGCAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGTGCTGACCTGCATCATGAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000149089.2
ENSMUST00000196488.5
CDS CCA 72 bp CACACCGATGGGTTTGGACAGGTCCCGGAAGACAGCTaGATTGCTGAGGTCCAAGACTGGGGACACATAGTC +
Preference number: 6 (lower is better)
Translates to: HTDGFGQVPEDS*IAEVQDWGHIV
Trigger: GACTATGTGTCCCCAGTCTTGGACCTCAGCAATCCAGCTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TCACAAGCTGGGCATGCTTGGGATTCACCACACCGATaGGTTTGGACAGGTCCCGGAAGACAGCTGGATTGC +
Preference number: 6 (lower is better)
Translates to: SQAGHAWDSPHR*VWTGPGRQLDC
Trigger: GCAATCCAGCTGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp AATGTGGAAGTAACCCTCAAGCAGGGTACGCAGTTCTaGTCCTCGGGGTGGTGCTCGGCTAGCATGCAGAAC +
Preference number: 6 (lower is better)
Translates to: NVEVTLKQGTQF*SSGWCSASMQN
Trigger: GTTCTGCATGCTAGCCGAGCACCACCCCGAGGACCAGAACTGCGTACCCTGCTTGAGGGTTACTTCCACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp AGCAGGGTTAGCAACAGCTCCAGGGTGCCCACCACCTaGCCATCGTCACCGGTAGCTGCCAAAAAGTTCAAT +
Preference number: 6 (lower is better)
Translates to: SRVSNSSRVPTT*PSSPVAAKKFN
Trigger: ATTGAACTTTTTGGCAGCTACCGGTGACGATGGCCAGGTGGTGGGCACCCTGGAGCTGTTGCTAACCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp TCTGAGACCCAGGGCCCACTCAGTAGTTTCTGCACCTaGGGGCTCCCCATGGTGGGATCTTTGCTGAAGGTA +
Preference number: 6 (lower is better)
Translates to: SETQGPLSSFCT*GLPMVGSLLKV
Trigger: TACCTTCAGCAAAGATCCCACCATGGGGAGCCCCAAGGTGCAGAAACTACTGAGTGGGCCCTGGGTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp GTGCTATTGGCGAGATGTGGCCAGGCTCCCAGGCGATCAAGCAGGTaGCACACACCTTCAAAGAGCTTCTCACTCCACAGCTCCTGGTTA +
Preference number: 6 (lower is better)
Translates to: VLLARCGQAPRRSSR*HTPSKSFSLHSSWL
Trigger: TAACCAGGAGCTGTGGAGTGAGAAGCTCTTTGAAGGTGTGTGCAACCTGCTTGATCGCCTGGGAGCCTGGCCACATCTCGCCAATAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp ACTGATTTTGGCCTCTTTGGTCACTGCCAGAGGCAGTaGGGTCTCCTCAGTGGGTGTCATGGGAGCTTCACC +
Preference number: 6 (lower is better)
Translates to: TDFGLFGHCQRQ*GLLSGCHGSFT
Trigger: GGTGAAGCTCCCATGACACCCACTGAGGAGACCTCACTGCCTCTGGCAGTGACCAAAGAGGCCAAAATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp TGGGTTTGGACAGGTCCCGGAAGACAGCTGGATTGCTaGGGTCCAAGACTGGGGACACATAGTCCTGCAAGA +
Preference number: 6 (lower is better)
Translates to: WVWTGPGRQLDC*GPRLGTHSPAR
Trigger: TCTTGCAGGACTATGTGTCCCCAGTCTTGGACCTCAGCAATCCAGCTGTCTTCCGGGACCTGTCCAAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp ATGCTGCCACAAACTGGCCTCGACGTACAGTGTGTATaGTCACAGTCCCATCCTCGGATCCAGACACGGCCA +
Preference number: 6 (lower is better)
Translates to: MLPQTGLDVQCV*SQSHPRIQTRP
Trigger: TGGCCGTGTCTGGATCCGAGGATGGGACTGTGATCATACACACTGTACGTCGAGGCCAGTTTGTGGCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp ACCAGATGGCCATCTTTGAAGACATTGACCAGGTTCTaGCTGAAGGGTCGGCGCCCGGGCACATGCACAATG +
Preference number: 6 (lower is better)
Translates to: TRWPSLKTLTRF*LKGRRPGTCTM
Trigger: CATTGTGCATGTGCCCGGGCGCCGACCCTTCAGTCAGAACCTGGTCAATGTCTTCAAAGATGGCCATCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp ACTTGGTGCCAAACTCATGTAGTTCACCCTCAGGCTTaGAGGGTGCTGGCTCATTGGGCCCCAGGCTACACA +
Preference number: 6 (lower is better)
Translates to: TWCQTHVVHPQA*RVLAHWAPGYT
Trigger: TGTGTAGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAACTACATGAGTTTGGCACCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GATGAGCCGCAACAGCAACGTGGGAGGCAAACGCTCTaGATCCTGCAGGTTCTCTTGGAAGAAGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: DEPQQQRGRQTL*ILQVLLEEGSK
Trigger: TTTGGAGCCTTCTTCCAAGAGAACCTGCAGGATGCAGAGCGTTTGCCTCCCACGTTGCTGTTGCGGCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TCCACCCTATGTCCTGTCAGACGGCCATCCAGCCCATaGCCAGGGGACAGGTCCAGACAGATATTGTTCTTA +
Preference number: 6 (lower is better)
Translates to: STLCPVRRPSSP*PGDRSRQILFL
Trigger: TAAGAACAATATCTGTCTGGACCTGTCCCCTGGCCATGGGCTGGATGGCCGTCTGACAGGACATAGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp CACACACCTTCAAAGAGCTTCTCACTCCACAGCTCCTaGTTACCGTGGCCCTCAGCACACAGGAAATCCTGC +
Preference number: 6 (lower is better)
Translates to: HTPSKSFSLHSS*LPWPSAHRKSC
Trigger: GCAGGATTTCCTGTGTGCTGAGGGCCACGGTAACCAGGAGCTGTGGAGTGAGAAGCTCTTTGAAGGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp ACTCTGACCACGTGCACTGCGATGGCATCGGTGTCCTaGTCAAGCACCTTGCTGTTCTGGATGAGGCGAATA +
Preference number: 6 (lower is better)
Translates to: TLTTCTAMASVS*SSTLLFWMRRI
Trigger: TATTCGCCTCATCCAGAACAGCAAGGTGCTTGACCAGGACACCGATGCCATCGCAGTGCACGTGGTCAGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000149089.2
ENSMUST00000196488.5
CDS CAA 72 bp AACTTGGTGCCAAACTCATGTAGTTCACCCTCAGGCTaGAAGGGTGCTGGCTCATTGGGCCCCAGGCTACAC +
Preference number: 6 (lower is better)
Translates to: NLVPNSCSSPSG*KGAGSLGPRLH
Trigger: GTGTAGCCTGGGGCCCAATGAGCCAGCACCCTTCAAGCCTGAGGGTGAACTACATGAGTTTGGCACCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp CGCCACGTCACTGAGAATAGCACGTTGGTGAGTAAGTaGCACAGCTCCTCTTCAGGGGTTTGCTGGGGGTTG +
Preference number: 6 (lower is better)
Translates to: RHVTENSTLVSK*HSSSSGVCWGL
Trigger: CAACCCCCAGCAAACCCCTGAAGAGGAGCTGTGCAACTTACTCACCAACGTGCTATTCTCAGTGACGTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp GGGTCCTCAAAGCTCTCATATTTCTCCCTCACAAGCTGGGCATGCTaGGGATTCACCACACCGATGGGTTTGGACAGGTCCCGGAAGACA +
Preference number: 6 (lower is better)
Translates to: GSSKLSYFSLTSWAC*GFTTPMGLDRSRKT
Trigger: TGTCTTCCGGGACCTGTCCAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAAATATGAGAGCTTTGAGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp GAGGAGCTCTGGGTGATAAAGGAGTGTGACTGTCGGTaGGGAACCAGAGCTAAGACCAGAGGTACAGCCTCA +
Preference number: 6 (lower is better)
Translates to: EELWVIKECDCR*GTRAKTRGTAS
Trigger: TGAGGCTGTACCTCTGGTCTTAGCTCTGGTTCCTCACCGACAGTCACACTCCTTTATCACCCAGAGCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CGCAACAGCAACGTGGGAGGCAAACGCTCTGCATCCTaGAGGTTCTCTTGGAAGAAGGCTCCAAATTCACAG +
Preference number: 6 (lower is better)
Translates to: RNSNVGGKRSAS*RFSWKKAPNSQ
Trigger: CTGTGAATTTGGAGCCTTCTTCCAAGAGAACCTGCAGGATGCAGAGCGTTTGCCTCCCACGTTGCTGTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp AGCTCTCATATTTCTCCCTCACAAGCTGGGCATGCTTaGGATTCACCACACCGATGGGTTTGGACAGGTCCC +
Preference number: 6 (lower is better)
Translates to: SSHISPSQAGHA*DSPHRWVWTGP
Trigger: GGGACCTGTCCAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAAATATGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp AGTGTGGCACCTGGAGGCCTTAATGCTGCCACAAACTaGCCTCGACGTACAGTGTGTATGATCACAGTCCCA +
Preference number: 6 (lower is better)
Translates to: SVAPGGLNAATN*PRRTVCMITVP
Trigger: TGGGACTGTGATCATACACACTGTACGTCGAGGCCAGTTTGTGGCAGCATTAAGGCCTCCAGGTGCCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp TCAAAGAGCTTCTCACTCCACAGCTCCTGGTTACCGTaGCCCTCAGCACACAGGAAATCCTGCAGTAAACGG +
Preference number: 6 (lower is better)
Translates to: SKSFSLHSSWLP*PSAHRKSCSKR
Trigger: CCGTTTACTGCAGGATTTCCTGTGTGCTGAGGGCCACGGTAACCAGGAGCTGTGGAGTGAGAAGCTCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp AATTCACAGGGCAAGGCGGCCGGAGGGAACTTGTATTaGCTCTTCTCCTTGGAGCTGATGACTTCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: NSQGKAAGGNLY*LFSLELMTSPV
Trigger: CACTGGGGAAGTCATCAGCTCCAAGGAGAAGAGCAAATACAAGTTCCCTCCGGCCGCCTTGCCCTGTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp GCAAGGCAGGTCACTATATCAAGGTGTCGGCTTAGCTaGTTCAACAGCCTGCCACGGGGTAGTGAAGTCACT +
Preference number: 6 (lower is better)
Translates to: ARQVTISRCRLS*FNSLPRGSEVT
Trigger: AGTGACTTCACTACCCCGTGGCAGGCTGTTGAATCAGCTAAGCCGACACCTTGATATAGTGACCTGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp CTATATCAAGGTGTCGGCTTAGCTGATTCAACAGCCTaGCACGGGGTAGTGAAGTCACTCGTAGGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: LYQGVGLADSTA*HGVVKSLVGCH
Trigger: ATGGCAGCCTACGAGTGACTTCACTACCCCGTGGCAGGCTGTTGAATCAGCTAAGCCGACACCTTGATATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp TGTTCAAGTGGAGGATATGTAGAGAGCACTGAGCGGTaGCCAGCAGAACAAAGTCTTCTGCCACAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: CSSGGYVESTER*PAEQSLLPQSG
Trigger: CCCTGACTGTGGCAGAAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTCTACATATCCTCCACTTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp GTAACCGCTCATTCTGCTGCAGTCTTCGCAAGATCTTaGAGACCCTGTCGGTCAAAAGGGGCGTTGACTTTG +
Preference number: 6 (lower is better)
Translates to: VTAHSAAVFARS*RPCRSKGALTL
Trigger: CAAAGTCAACGCCCCTTTTGACCGACAGGGTCTGCAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp AATAGGATGTATCCAAGCACAAGACGTAAGCCGATCTaGGCCATCTCCCGGAGATCTGCTGTGCTATTGGCG +
Preference number: 6 (lower is better)
Translates to: NRMYPSTRRKPI*AISRRSAVLLA
Trigger: CGCCAATAGCACAGCAGATCTCCGGGAGATGGCGCAGATCGGCTTACGTCTTGTGCTTGGATACATCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp GGGTCCTCAAAGCTCTCATATTTCTCCCTCACAAGCTaGGCATGCTTGGGATTCACCACACCGATGGGTTTG +
Preference number: 6 (lower is better)
Translates to: GSSKLSYFSLTS*ACLGFTTPMGL
Trigger: CAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAAATATGAGAGCTTTGAGGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp AAGCTCTCATATTTCTCCCTCACAAGCTGGGCATGCTaGGGATTCACCACACCGATGGGTTTGGACAGGTCC +
Preference number: 6 (lower is better)
Translates to: KLSYFSLTSWAC*GFTTPMGLDRS
Trigger: GGACCTGTCCAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTGAGGGAGAAATATGAGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp AGTCTTCTCGAAGACACCCACAAAGGCCTTCAGCCATaGCTGCAGGTAACCAAGGTCCTTCTGCGCGTAGTA +
Preference number: 6 (lower is better)
Translates to: SLLEDTHKGLQP*LQVTKVLLRVV
Trigger: TACTACGCGCAGAAGGACCTTGGTTACCTGCAGCAATGGCTGAAGGCCTTTGTGGGTGTCTTCGAGAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp GGTAACCGCTCATTCTGCTGCAGTCTTCGCAAGATCTaGCAGACCCTGTCGGTCAAAAGGGGCGTTGACTTT +
Preference number: 6 (lower is better)
Translates to: GNRSFCCSLRKI*QTLSVKRGVDF
Trigger: AAAGTCAACGCCCCTTTTGACCGACAGGGTCTGCAAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 90 bp AGCACCTTGCTGTTCTGGATGAGGCGAATAAGATGCTCAAAGCAATaGTTGCTAAGGAAGGTGGCTTGTAGCACTGGCCGGTCCTCACAC +
Preference number: 6 (lower is better)
Translates to: STLLFWMRRIRCSKQ*LLRKVACSTGRSSH
Trigger: GTGTGAGGACCGGCCAGTGCTACAAGCCACCTTCCTTAGCAACAATTGCTTTGAGCATCTTATTCGCCTCATCCAGAACAGCAAGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000149089.2
ENSMUST00000196488.5
CDS CCA 72 bp GGTAACCGCTCATTCTGCTGCAGTCTTCGCAAGATCTaGCCATCGTCACCGGTAGCTGCCAAAAAGTTCAAT +
Preference number: 6 (lower is better)
Translates to: GNRSFCCSLRKI*PSSPVAAKKFN
Trigger: ATTGAACTTTTTGGCAGCTACCGGTGACGATGGCCAGATCTTGCGAAGACTGCAGCAGAATGAGCGGTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130024.2
CDS TCA 72 bp GCTCATGAGTGTGTCGTAGCAGGCATTCCAGAAGCCTaGCATGAGGTCATGGCTCTTAGCATATGTGTCCAT +
Preference number: 6 (lower is better)
Translates to: AHECVVAGIPEA*HEVMALSICVH
Trigger: ATGGACACATATGCTAAGAGCCATGACCTCATGTCAGGCTTCTGGAATGCCTGCTACGACACACTCATGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS TCA 72 bp CGCAATTTGTTCAAGTGGAGGATATGTAGAGAGCACTaGGCGGTGCCCAGCAGAACAAAGTCTTCTGCCACA +
Preference number: 6 (lower is better)
Translates to: RNLFKWRICREH*AVPSRTKSSAT
Trigger: TGTGGCAGAAGACTTTGTTCTGCTGGGCACCGCTCAGTGCTCTCTACATATCCTCCACTTGAACAAATTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp GTGTGTGCCATAGTGGAACTTGTCGATTGTGCCTGCTaGGTCCTCAAAGCTCTCATATTTCTCCCTCACAAG +
Preference number: 6 (lower is better)
Translates to: VCAIVELVDCAC*VLKALIFLPHK
Trigger: CTTGTGAGGGAGAAATATGAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAGTTCCACTATGGCACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp GCCTCACTGACAACCTCAGCGAAAAAGGCCTTGAGTTaGTTGAGGTTCTGGAAGATGCTTGGTGAGTTAGTG +
Preference number: 6 (lower is better)
Translates to: ASLTTSAKKALS*LRFWKMLGELV
Trigger: CACTAACTCACCAAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTTTTTCGCTGAGGTTGTCAGTGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000130024.2
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CAA 72 bp CTGTTCTGGATGAGGCGAATAAGATGCTCAAAGCAATaGTTGCTAAGGAAGGTGGCTTGTAGCACTGGCCGG +
Preference number: 6 (lower is better)
Translates to: LFWMRRIRCSKQ*LLRKVACSTGR
Trigger: CCGGCCAGTGCTACAAGCCACCTTCCTTAGCAACAATTGCTTTGAGCATCTTATTCGCCTCATCCAGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000133191.8
ENSMUST00000149089.2
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS GCA 72 bp ATAGTGTGTGCCATAGTGGAACTTGTCGATTGTGCCTaGTGGGTCCTCAAAGCTCTCATATTTCTCCCTCAC +
Preference number: 6 (lower is better)
Translates to: IVCAIVELVDCA*WVLKALIFLPH
Trigger: GTGAGGGAGAAATATGAGAGCTTTGAGGACCCAGCAGGCACAATCGACAAGTTCCACTATGGCACACACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5
CDS CCA 72 bp GCACTTACAGTCACCTCAGCGAAAAAGGCCTTGAGTTaGTTGAGGTTCTGGAAGATGCTTGGTGAGTTAGTG +
Preference number: 6 (lower is better)
Translates to: ALTVTSAKKALS*LRFWKMLGELV
Trigger: CACTAACTCACCAAGCATCTTCCAGAACCTCAACCAACTCAAGGCCTTTTTCGCTGAGGTGACTGTAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000131017.8
CDS TCA 72 bp GTCATGGCTCTTAGCATATGTGTCCATTTCAAACTTTaGCATAGTTGGCTGAACCTGCTTGTCGATGAAGTG +
Preference number: 6 (lower is better)
Translates to: VMALSICVHFKL*HSWLNLLVDEV
Trigger: CACTTCATCGACAAGCAGGTTCAGCCAACTATGTCAAAGTTTGAAATGGACACATATGCTAAGAGCCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000130024.2
ENSMUST00000131017.8
ENSMUST00000133191.8
ENSMUST00000167320.8
ENSMUST00000196488.5