RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NBAS (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020576

Ensembl transcript IDs: ENSMUST00000042953.10

Found 363 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp TGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTaGTGCTCTCTCCAGCCAGGAGCAGGGTCATGGGTG +
Preference number: 3 (lower is better)
Translates to: CYKCCFGHGFGV*CSLQPGAGSWV
Trigger: CACCCATGACCCTGCTCCTGGCTGGAGAGAGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTGGAGGGGGTCGCGTaGCCCACAGAGATCAGCACT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALEGVA*PTEIST
Trigger: AGTGCTGATCTCTGTGGGTCACGCGACCCCCTCCAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGTTCTGAAGACCCGGTaGGTCCCCTGGACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVVLKTR*VPWTAR
Trigger: CCTGGCTGTCCAGGGGACTCACCGGGTCTTCAGAAC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCCGCCCAGTGTGCCTaGTCAGGCGAACCATCAGGC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASAQCA*SGEPSG
Trigger: GCCTGATGGTTCGCCTGACCAGGCACACTGGGCGGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCAGATGCCGGGGCAATaGCAAAGAGCTCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVQMPGQ*QRARCP
Trigger: TGGGCAGCGAGCTCTTTGTCATTGCCCCGGCATCTG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAAAGCCATGAGCTCCTaGCGAGTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVKAMSS*RVARSW
Trigger: CCAGGACCTGGCCACTCGTCAGGAGCTCATGGCTTT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCTCAGGTGGAAGGACTaGCCCAAGAGCTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVLRWKD*PKSWST
Trigger: GGTGCTCCAGCTCTTGGGGCAGTCCTTCCACCTGAG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTCATGGCCGGCCTCCTaGAGGTGTCTAGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSWPAS*RCLASS
Trigger: GGAACTGGCTAGACACCTGCAGGAGGCCGGCCATGA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCACAGCCCAACTCTCTaGGTAGCCTGCGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVHSPTL*VACGHQ
Trigger: CTGATGGCCGCAGGCTACCCAGAGAGTTGGGCTGTG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGACTGCCCCAAGAGCTaGAGCACCTGGATTCGAGGC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVDCPKS*STWIRG
Trigger: GCCTCGAATCCAGGTGCTCCAGCTCTTGGGGCAGTC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCCTGGCTGCTCATCTTaGCGCCAGACTCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVPGCSS*RQTPCC
Trigger: GCAACAAGGAGTCTGGCGTCAAGATGAGCAGCCAGG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCCAAGGCGAACAAGTaGCAAGGCGCAGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASKANK*QGAVHL
Trigger: CAGGTGGACTGCGCCTTGTCACTTGTTCGCCTTGGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAGGTCTAATTCCTCCTaGATGGCAGCCGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVRSNSS*MAAGLS
Trigger: GGACAGGCCGGCTGCCATTCAGGAGGAATTAGACCT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAGGCCCTGGAGGAGCTaGGCCTGGGTAAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDARPWRS*AWVKSR
Trigger: TCTGGATTTTACCCAGGCTCAGCTCCTCCAGGGCCT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGAGGCCATGCTGCTCTaGGAATGGCTTCCGTTCGGA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAEAMLL*EWLPFG
Trigger: TCCGAACGGAAGCCATTCTCAGAGCAGCATGGCCTC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGACAGCCAGGAGGAGTaGGCCAGCTTCGACTTCATG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVDSQEE*ASFDFM
Trigger: CATGAAGTCGAAGCTGGCTCACTCCTCCTGGCTGTC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCAGTCGTAACTCCATaGTACCCGTCTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAAVVTP*YPSPLG
Trigger: CCCCAGTGGAGACGGGTAGCATGGAGTTACGACTGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCCCTTACAGTCCCTGTaGTCTCGGCATAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVPLQSL*SRHRPA
Trigger: TGCTGGCCTATGCCGAGAGCACAGGGACTGTAAGGG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAACTCACTGTCATCCTaGAGGCTCGGCTCCACCACC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVNSLSS*RLGSTT
Trigger: GGTGGTGGAGCCGAGCCTGCAGGATGACAGTGAGTT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCAGCAGTAAACCTCTaGACGTCCACGCCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASAVNL*TSTPFR
Trigger: GCGGAAGGGCGTGGACGTGCAGAGGTTTACTGCTGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAAAGGCCGCAGCCACTaGAGCACGTCTTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAKGRSH*STSSAD
Trigger: GTCTGCTGAAGACGTGCTGCAGTGGCTGCGGCCTTT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGGGTGGCAGTGACCTaGGGAGAGGGCTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVWVAVT*GEGSNH
Trigger: ATGGTTTGAGCCCTCTCCCCAGGTCACTGCCACCCA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCTGAGGGTTTCCAGGTaGGCAAGCGACGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVLRVSR*ASDVSR
Trigger: TCTGGAGACGTCGCTTGCCCACCTGGAAACCCTCAG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCCCCATTGTCCACACTaGTGCGGACTGCCCCAACAA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVPHCPH*CGLPQQ
Trigger: TTGTTGGGGCAGTCCGCACCAGTGTGGACAATGGGG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGCTTTCGGTTGCCTCTaGGCTGCACTTCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVAFGCL*AALLSQ
Trigger: CTGAGACAGAAGTGCAGCTCAGAGGCAACCGAAAGC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCCTCTGCTCTGCTCTaGTACCAGGCCATCACCTTC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASSALL*YQAITF
Trigger: GAAGGTGATGGCCTGGTATCAGAGCAGAGCAGAGGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCGGCCATCAGCTGCTaGCAGTACATACTGGCTACT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAAAISC*QYILAT
Trigger: AGTAGCCAGTATGTACTGTCAGCAGCTGATGGCCGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGTCCTGGTAACCTTCTaGCTGGCCCAACTGGCTACA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAVLVTF*LAQLAT
Trigger: TGTAGCCAGTTGGGCCAGTCAGAAGGTTACCAGGAC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTCAAAGCGAAAGCCATaGGCTCCTGACGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSKRKP*APDEWP
Trigger: TGGCCACTCGTCAGGAGCTCATGGCTTTCGCTTTGA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGATGGCACTTGTCCCTaGAACATGGAGCCAATCGGG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVDGTCP*NMEPIG
Trigger: CCCGATTGGCTCCATGTTTCAGGGACAAGTGCCATC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTATGTCCACCTGTCTCTaGGGCCATGCTGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAMSTCL*GHAALR
Trigger: TCTCAGAGCAGCATGGCCTCAGAGACAGGTGGACAT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCACCTTAGTGACGGCTaGGATTTGCTCCAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVHLSDG*DLLQGH
Trigger: ATGGCCCTGGAGCAAATCTCAGCCGTCACTAAGGTG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGATGACCAAGAGCTCTaGAGACCACTGTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDADDQEL*RPLCTG
Trigger: GCCAGTGCACAGTGGTCTGCAGAGCTCTTGGTCATC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGCTCCACCACCATTCTaGATTCCAACTCCTCGCACC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVAPPPF*IPTPRT
Trigger: GGTGCGAGGAGTTGGAATGCAGAATGGTGGTGGAGC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGCTGTAGTAGTAGGCTaGCAGCTGGAGAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVAVVVG*QLERQC
Trigger: GCACTGTCTCTCCAGCTGGCAGCCTACTACTACAGC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGAAAGCATCTGCCCATaGTTCCCAGGGATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAESICP*FPGILG
Trigger: CCCCAGAATCCCTGGGAAGCATGGGCAGATGCTTTC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCATTGTCCACACTGGTaGGGACTGCCCCAACAACAC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVHCPHW*GLPQQH
Trigger: GTGTTGTTGGGGCAGTCCGCACCAGTGTGGACAATG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCACCCACTGCCTCACTaGACTGAGGGCAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAHPLPH*TEGNAE
Trigger: TTCAGCATTGCCCTCAGTGCAGTGAGGCAGTGGGTG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCCACACACTGGTCCTaGACAGCAGCCAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASTHWS*TAARSL
Trigger: CAAGCTTCTGGCTGCTGTCCAGGACCAGTGTGTGGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTGATCTCCACACACTaGTCCTGGACAGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALISTH*SWTAAR
Trigger: TCTGGCTGCTGTCCAGGACCAGTGTGTGGAGATCAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCACTGCAGCAGTTCCTTaGCAGCGTCCACGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVTAAVP*QRPRSQ
Trigger: CTGAGAACGTGGACGCTGCCAAGGAACTGCTGCAGT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCCACCTGCCCAGCATaGTGCTCTATGTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASTCPA*CSMSSA
Trigger: AGCAGAGGACATAGAGCACCATGCTGGGCAGGTGGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGTTTTCCAGGCGACTaGAGCACAGAAGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVCFPGD*STEGSP
Trigger: CGGAGAGCCTTCTGTGCTCCAGTCGCCTGGAAAACA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCCCACGCCTTCCTTCTaGGTCTTCACCTGCAACTCT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAPTPSF*VFTCNS
Trigger: AGAGTTGCAGGTGAAGACCCAGAAGGAAGGCGTGGG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCGGTGTACAGAGAGCTaGGGGAAAGCATCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVRCTES*GKASAH
Trigger: ATGGGCAGATGCTTTCCCCCAGCTCTCTGTACACCG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAGAGGTCTCAGGATCTaGGTCAGAATCCACTTCCCC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDARGLRI*VRIHFP
Trigger: GGGGAAGTGGATTCTGACTCAGATCCTGAGACCTCT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGGTTGGTGGAAGAGTTaGAGTACTCTCTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAGWWKS*STLCWQ
Trigger: CTGCCAGCAGAGAGTACTTCAACTCTTCCACCAACC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGAAGACTTCCCACTGTaGGATACTGTACCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVEDFPL*DTVPLC
Trigger: GCACAGCGGTACAGTATCTCACAGTGGGAAGTCTTC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCGCCAGACTCCTTGTTaGTTCAGAGATGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDARQTPC*FRDGMA
Trigger: GGCCATTCCATCTCTGAAGCAACAAGGAGTCTGGCG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGGTCACTGCGCCGTCTaGCCACCAATTGACATCAAT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVGHCAV*PPIDIN
Trigger: ATTGATGTCAATTGGTGGGCAGACGGCGCAGTGACC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGAGCCTCCAGGTCTGTaGCTTTCAAGCCATACTGCA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAEPPGL*LSSHTA
Trigger: TGCAGTATGGCTTGAAAGGCACAGACCTGGAGGCTC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGTGCTCTATGTCCTCTaGTCTGCTCTGATACCAGGC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAVLYVL*SALIPG
Trigger: GCCTGGTATCAGAGCAGAGCAGAGGACATAGAGCAC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTACAGGTCAGCTGAACTaGTGCCCAAAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDATGQLN*CPKQQH
Trigger: ATGCTGCTGCTTTGGGCAGCAGTTCAGCTGACCTGT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCCATCACTGACAGCCTaGAGCACAGCCTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVPSLTA*STALVV
Trigger: TACTACCAAGGCTGTGCTGCAGGCTGTCAGTGATGG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGACTTTTTCCACCACTaGCCATCACTGACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVDFFHH*PSLTAC
Trigger: GCAGGCTGTCAGTGATGGGCAGTGGTGGAAAAAGTC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAGAACACCAGGAGCTTaGCATCCTCCTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVRTPGA*HPPHSG
Trigger: ACCTGAGTGAGGAGGATGGCAAGCTCCTGGTGTTCT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTCTCTGAGGCCATGCTaGTCTGAGAATGGCTTCCGT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSLRPC*SENGFR
Trigger: ACGGAAGCCATTCTCAGAGCAGCATGGCCTCAGAGA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTGTCTCTGAGGCCATaGTGCTCTGAGAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALSLRP*CSENGF
Trigger: GAAGCCATTCTCAGAGCAGCATGGCCTCAGAGACAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGCTTCAGAGATGGAATaGCCCAGATGCTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVASEME*PRCSAS
Trigger: GGAAGCTGAGCATCTGGGCCATTCCATCTCTGAAGC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCCTGCCGTTTGCTCTTaGAAGGCTCTTTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAPAVCS*KALCLL
Trigger: CAGCAGACAAAGAGCCTTCCAAGAGCAAACGGCAGG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTACACGTGCTGCTGCATaGTCAACATGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDATRAAA*STCPAA
Trigger: TGCTGCAGGACATGTTGACCATGCAGCAGCACGTGT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCATCTGCCCTGCAAGGTaGATGTTTTCCAGGCGACTG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVICPAR*MFSRRL
Trigger: CAGTCGCCTGGAAAACATCCACCTTGCAGGGCAGAT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCTGTAAGCAGCACCTaGCCAAATCCATGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAAVSST*PNPCSC
Trigger: ACAGCTGCATGGATTTGGCCAGGTGCTGCTTACAGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTATTTCACCAGCAGCCTaGCATCCACCAGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAISPAA*HPPAGK
Trigger: TTTCCCTGCTGGTGGATGCCAGGCTGCTGGTGAAAT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCATCTTTTGCAGACCTaGTCTCCACACACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAHLLQT*SPHTGP
Trigger: AGGACCAGTGTGTGGAGATCAGGTCTGCAAAAGATG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGAATTGAAGCACTGTTaGCAGCGGACTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAELKHC*QRTSST
Trigger: AGTGGAGGAAGTCCGCTGTCAACAGTGCTTCAATTC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGGAAACACTTGTGTCTaGGCCTCTGTCAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVGNTCV*ASVSFP
Trigger: TGGAAAGCTGACAGAGGCTCAGACACAAGTGTTTCC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTACTCCAAGTGGGTCATaGAGACTTCCCACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDATPSGS*RLPTVR
Trigger: TCTCACAGTGGGAAGTCTTCATGACCCACTTGGAGT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCACAAACCACTCTCACTaGACAGGAACTCCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVTNHSH*TGTPSG
Trigger: CCCACTTGGAGTTCCTGTTCAGTGAGAGTGGTTTGT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTTCGCGTGCTTCTACTaGCAGCTTGGACACAGCTTT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAFACFY*QLGHSF
Trigger: AAAGCTGTGTCCAAGCTGTCAGTAGAAGCACGCGAA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCATAGGCCAGCAGTGTaGAGTCGTAACTCCATGCTA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAHRPAV*SRNSML
Trigger: TAGCATGGAGTTACGACTGCACACTGCTGGCCTATG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTATGGAATGGCCCAGATaGTCAGCTTCCCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAMEWPR*SASLRS
Trigger: ACTTCTCAGGGAAGCTGAGCATCTGGGCCATTCCAT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGGAAGGCTCTTTGTCTaGTGGGGAAAGCTCCTCATA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVGRLFV*WGKLLI
Trigger: TATGAGGAGCTTTCCCCAGCAGACAAAGAGCCTTCC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGCTCTTCCTGCCGTTTaGTCTTGGAAGGCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVALPAV*SWKALC
Trigger: ACAAAGAGCCTTCCAAGAGCAAACGGCAGGAAGAGC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTATGTCCTCTGCTCTaGTCTGATACCAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALCPLL*SDTRPS
Trigger: TGATGGCCTGGTATCAGAGCAGAGCAGAGGACATAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCTGCATCATCTGCCCTaGAAGGTGGATGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVLHHLP*KVDVFQ
Trigger: CTGGAAAACATCCACCTTGCAGGGCAGATGATGCAG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGCACATGGAGTGCTTaGTCCACTAACAGGATCAGG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVCTWSA*STNRIR
Trigger: CCTGATCCTGTTAGTGGAGCAAGCACTCCATGTGCA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCCAAGAGAAGTTCAATaGTGCTGGGAGGGCAATGTG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVPREVQ*CWEGNV
Trigger: CACATTGCCCTCCCAGCAGCATTGAACTTCTCTTGG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGCCCAGAACAACTTCTaGAACCAGACGGTGTACAGA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVAQNNF*NQTVYR
Trigger: TCTGTACACCGTCTGGTTGCAGAAGTTGTTCTGGGC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTCGTCCCCTAGGCTCTaGTTGTTCTCCTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSSPRL*LFSSVH
Trigger: ATGTACAGAGGAGAACAAGCAGAGCCTAGGGGACGA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTATACCAACCCAGCAATaGCGTAGCTTAAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAIPTQQ*RSLSPQ
Trigger: CTGGGGACTTAAGCTACGCCATTGCTGGGTTGGTAT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTGATAAAGCTCCTCTaGAGTTGTGGAGCGCAGACT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALIKLL*SCGAQT
Trigger: AGTCTGCGCTCCACAACTCCAGAGGAGCTTTATCAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTCTCCAAACACTCATaGAGAACCCAAGACCGCTTC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALSKHS*RTQDRF
Trigger: GAAGCGGTCTTGGGTTCTCCATGAGTGTTTGGAGAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAGGATTTCCAGGGCTTaGACATTACTCTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDARISRA*TLLSRA
Trigger: TGCTCGGGAGAGTAATGTCCAAGCCCTGGAAATCCT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGTTTCTCACAGCGGTaGAGAAAGGGAACCATCCAC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVCFSQR*RKGTIH
Trigger: GTGGATGGTTCCCTTTCTCCACCGCTGTGAGAAACA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTGCCAGGCCCAGGATaGTTTCTCTTTTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALPGPG*FLFCTG
Trigger: ACCAGTACAAAAGAGAAACCATCCTGGGCCTGGCAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGTGGGTAGAAGGGTGTaGAGACACATTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAVGRRV*RHISPA
Trigger: TGCTGGTGAAATGTGTCTCCACACCCTTCTACCCAC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGCCCTTGTTGGTTGTTaGCCACAAGGTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVALVGC*PQGDQQ
Trigger: TTGTTGGTCACCTTGTGGCCAACAACCAACAAGGGC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGTGGCCATTCGGTATTaGCCAGCAAGTCATAGAGAA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVVAIRY*PASHRE
Trigger: TTCTCTATGACTTGCTGGTCAATACCGAATGGCCAC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCACTTCTAGCAGCTGCTaGATCATCCTTAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVTSSSC*IILRGW
Trigger: CCAACCTCTAAGGATGATTCAGCAGCTGCTAGAAGT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTTCTTAAGCTCTTCCTaGCGTTTGCTCTTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVFLSSS*RLLLEG
Trigger: GCCTTCCAAGAGCAAACGGCAGGAAGAGCTTAAGAA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCAGCTCGGTGTTTATaGTCAGCCCAAGGGATGATT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASARCL*SAQGMI
Trigger: AATCATCCCTTGGGCTGAGCATAAACACCGAGCTGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGGTGAAGTCGCAGCCTaGTTCATAAACCAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAGEVAA*FINQCF
Trigger: GAAACACTGGTTTATGAAGCAGGCTGCGACTTCACC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTACACTGCATCATCTaGCCTGCAAGGTGGATGTTT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALHCII*PARWMF
Trigger: AAACATCCACCTTGCAGGGCAGATGATGCAGTGTAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCACAGAGATCAGCACTaGCACCACTCAATGCAGAAA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVHRDQH*HHSMQK
Trigger: TTTCTGCATTGAGTGGTGGCAGTGCTGATCTCTGTG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTCTCCACTGGGGCTTTaGGTCTTTTGGAACTTGACA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSPLGL*VFWNLT
Trigger: TGTCAAGTTCCAAAAGACCCAAAGCCCCAGTGGAGA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTTGTTGCTTCAGAGATaGAATGGCCCAGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVLLLQR*NGPDAQ
Trigger: CTGAGCATCTGGGCCATTCCATCTCTGAAGCAACAA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTCTTAGTAGCTCATTaGCTGCACCTGGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALLVAH*LHLETV
Trigger: AACAGTCTCCAGGTGCAGCCAATGAGCTACTAAGAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCTCATAGCAAGCACTaGAATCGAGGCACGTGTACA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASHSKH*NRGTCT
Trigger: TGTACACGTGCCTCGATTCCAGTGCTTGCTATGAGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCAAGGCCTAGCAGTTTaGCTGACTGTTTGTAGCATG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAQGLAV*LTVCSM
Trigger: CATGCTACAAACAGTCAGCCAAACTGCTAGGCCTTG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGAAGTTCAATGCTGCTaGGAGGGCAATGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVEVQCC*EGNVSK
Trigger: CTTTGACACATTGCCCTCCCAGCAGCATTGAACTTC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGGACAAGACTTTCATaGTGGTTGCAGTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVWTRLS*WLQWSS
Trigger: ACTGGACCACTGCAACCACCATGAAAGTCTTGTCCA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTTGTCCCTGAAACATaGAGCCAATCGGGCATAGAT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALVPET*SQSGID
Trigger: ATCTATGCCCGATTGGCTCCATGTTTCAGGGACAAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAACAGGAACTCCAAGTaGGTCATGAAGACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDANRNSK*VMKTSH
Trigger: GTGGGAAGTCTTCATGACCCACTTGGAGTTCCTGTT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGAACCACGACCTTCTTaGGGGTCCTCTTCTGAATTT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAEPRPS*GSSSEF
Trigger: AAATTCAGAAGAGGACCCCCAAGAAGGTCGTGGTTC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGGCCATCTAAACACATaGCCACAGCTTGGTCATGAA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVGHLNT*PQLGHE
Trigger: TTCATGACCAAGCTGTGGCCATGTGTTTAGATGGCC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAGGGAAAGCAGCTCCTaGTCACAATTGGAGTCATTC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVRESSS*SQLESF
Trigger: GAATGACTCCAATTGTGACCAGGAGCTGCTTTCCCT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGTGACCAACAATATGTaGGTAGAAGGGTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVVTNNM*VEGCGD
Trigger: GTCTCCACACCCTTCTACCCACATATTGTTGGTCAC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGGTGTTCTTCACAAATaGAACTGGTTTCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAGVLHK*NWFLQS
Trigger: GGACTGGAGAAACCAGTTTCATTTGTGAAGAACACC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCCACAGCTTGGTCATaGATTTTCTCCTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAATAWS*IFSFSD
Trigger: GTCAGAAAAGGAGAAAATTCATGACCAAGCTGTGGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCTCCTCATAGGCAATaGTGTCAATGTCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAAPHRQ*CQCLCH
Trigger: GTGACATAGACATTGACAGCATTGCCTATGAGGAGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAAGTCTTTCATCTGCTaGAGGTCTTTGAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAKSFIC*RSLSVR
Trigger: CCTCACACTCAAAGACCTGCAGCAGATGAAAGACTT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCTGTTTGAAGAGAGCTaGTGGCTTCCAAGAGAAGTT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVLFEES*WLPREV
Trigger: AACTTCTCTTGGAAGCCAGCAGCTCTCTTCAAACAG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCATCACTTGCTAGTTaGAAGAGAACTTCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAASLAS*KRTSVV
Trigger: AACCACGGAAGTTCTCTTGCAACTAGCAAGTGATGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCCAGGGAAAGAGCGATaGTGTAGACATTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAPGKER*CRHFPQ
Trigger: TTGAGGAAAATGTCTACAGCATCGCTCTTTCCCTGG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTTCTGGAGTATTTCCTaGTCACTATTCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAFWSIS*SLFLRL
Trigger: CAGCCTGAGGAATAGTGAGCAGGAAATACTCCAGAA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCCGAGAACAGAGTGTaGCGGTTTTCTTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASENRV*RFSSFS
Trigger: TGAGAATGAAGAAAACCGGCACACTCTGTTCTCGGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTACAAGACTTTCATGGTaGTTGCAGTGGTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDATRLSW*LQWSSV
Trigger: TACACTGGACCACTGCAACCACCATGAAAGTCTTGT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTTTTGTGATGATGAATaGTGCACCGTGCTTTCGGTT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAFCDDE*CTVLSV
Trigger: AACCGAAAGCACGGTGCATCATTCATCATCACAAAA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCGTCTGCCCACCAATTaGCATCAATCAATGGATAAA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVRLPTN*HQSMDK
Trigger: TTTATCCATTGATTGATGTCAATTGGTGGGCAGACG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAAAGCTCTGACACACTaGGAATTTTCTCCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAKALTH*EFSPVG
Trigger: ACCAACTGGAGAAAATTCTCAGTGTGTCAGAGCTTT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAAGCTTGCCATTGTTTaGGAGTACCAAATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAKLAIV*EYQMPV
Trigger: AACTGGCATTTGGTACTCGCAAACAATGGCAAGCTT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTATAGGTGGCCAAGCTTaGAAGAGTAAAATCAAGTGC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAIGGQA*KSKIKC
Trigger: GCACTTGATTTTACTCTTGCAAGCTTGGCCACCTAT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTTTGAAGAGAGCTGCTaGCTTCCAAGAGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVFEESC*LPREVQ
Trigger: TTGAACTTCTCTTGGAAGCCAGCAGCTCTCTTCAAA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCAGTTGTTTCAAAGTTaGCACAACCACAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVQLFQS*HNHSFP
Trigger: TGGAAAGCTGTGGTTGTGCCAACTTTGAAACAACTG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTTCTACTGACAGCTTaGACACAGCTTTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDALLLTA*TQLLEK
Trigger: TTTCTCCAAAAGCTGTGTCCAAGCTGTCAGTAGAAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAGTTTATCTGTTTATTaGCCAAGCGAACCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASLSVY*PSEPVH
Trigger: ATGGACTGGTTCGCTTGGTCAATAAACAGATAAACT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCCCAAGACCGCTTCTTaGTTTTACTCAAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVPKTAS*FYSSNC
Trigger: ACAATTACTTGAGTAAAATCAAGAAGCGGTCTTGGG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAGCATACGTTCTTGCTaGGAGAACAATATTCTGACT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDASIRSC*ENNILT
Trigger: AGTCAGAATATTGTTCTCTCAGCAAGAACGTATGCT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGGCTTCTCTATGAAATaGTTGATTGTCTTAATGGCC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVGFSMK*LIVLMA
Trigger: GGCCATTAAGACAATCAAGCATTTCATAGAGAAGCC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTCTTCGGAGCTAGATTaGGTGTTCTTCACAAATGAA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSSELD*VFFTNE
Trigger: TTCATTTGTGAAGAACACCCAATCTAGCTCCGAAGA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTTCTCTCCTTCAGGATaGATCTCAAAGTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVFSPSG*ISKFTL
Trigger: AAGAGTGAACTTTGAGATCCATCCTGAAGGAGAGAA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGTTTCTCTTTTGTACTaGTCATCAGCAGTAAACCTC +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAVSLLY*SSAVNL
Trigger: GAGGTTTACTGCTGATGACCAGTACAAAAGAGAAAC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCGCAAAAATAACAGATaGTCTCTGATTGCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDARKNNR*SLIAFV
Trigger: CACAAAAGCAATCAGAGATCATCTGTTATTTTTGCG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGGGTCTTTTGGAACTTaGCATTTCCCAATAATTGAT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAGSFGT*HFPIID
Trigger: ATCAATTATTGGGAAATGTCAAGTTCCAAAAGACCC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTCTGGTTTAGAATGCTaGAATATCTTCAAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSGLEC*NIFKGS
Trigger: ACTTCCCTTGAAGATATTTCAGCATTCTAAACCAGA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR TCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTGGGATAGATATACTTaGCCATGTGTTTATGAAAGG +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDAWDRYT*PCVYER
Trigger: CCTTTCATAAACACATGGTCAAGTATATCTATCCCA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGTAAAATCATCTTTTaGAGACCTGATCTCCACACA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVCKIIF*RPDLHT
Trigger: TGTGTGGAGATCAGGTCTGCAAAAGATGATTTTACA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGGAGAAAATGTAATTaGATCCATCACAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVWRKCN*IHHSDE
Trigger: CTCATCACTGTGATGGATGCAATTACATTTTCTCCA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR GCA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTACTGCCACCACTCAATaGAGAAATTATTTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: EQLIATNAASGMALGSDATATTQ*RNYLSD
Trigger: ATCACTCAAATAATTTCTGCATTGAGTGGTGGCAGT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCAGACCACTGTGCACTaGCTTTGTATTCTAAAAATA +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVQTTVH*LCILKI
Trigger: TATTTTTAGAATACAAAGCCAGTGCACAGTGGTCTG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CCA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCACGAATGTGGATTTCTaGTTTAATAGCAGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVTNVDF*FNSSCF
Trigger: GAAACAACTGCTATTAAACCAGAAATCCACATTCGT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TTGTCCACACTGGTGCGGACTGCCCCAACAACACCTTCTAGGACCTaGAGGGGGTCGCGTGACCCACAGAGATCAGCACTGCCACCACTC +
Preference number: 5 (lower is better)
Translates to: LSTLVRTAPTTPSRT*RGSRDPQRSALPPL
Trigger: GAGTGGTGGCAGTGCTGATCTCTGTGGGTCACGCGACCCCCTCCAGGTCCTAGAAGGTGTTGTTGGGGCAGTCCGCACCAGTGTGGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TCCGTTCGGAAGAACACCAGGAGCTTGCCATCCTCCTCACTCAGGTaGAAGGACTGCCCCAAGAGCTGGAGCACCTGGATTCGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: SVRKNTRSLPSSSLR*KDCPKSWSTWIRGL
Trigger: GAGGCCTCGAATCCAGGTGCTCCAGCTCTTGGGGCAGTCCTTCCACCTGAGTGAGGAGGATGGCAAGCTCCTGGTGTTCTTCCGAACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp CAGTCCACCTGCCCAGCATGGTGCTCTATGTCCTCTGCTCTGCTCTaGTACCAGGCCATCACCTTCTCCACAGTAAGCTGGGGCGTCCTG +
Preference number: 5 (lower is better)
Translates to: QSTCPAWCSMSSALL*YQAITFSTVSWGVL
Trigger: CAGGACGCCCCAGCTTACTGTGGAGAAGGTGATGGCCTGGTATCAGAGCAGAGCAGAGGACATAGAGCACCATGCTGGGCAGGTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp GAAAGCCATGAGCTCCTGACGAGTGGCCAGGTCCTGGTAACCTTCTaGCTGGCCCAACTGGCTACACACAGCCCAACTCTCTGGGTAGCC +
Preference number: 5 (lower is better)
Translates to: ESHELLTSGQVLVTF*LAQLATHSPTLWVA
Trigger: GGCTACCCAGAGAGTTGGGCTGTGTGTAGCCAGTTGGGCCAGTCAGAAGGTTACCAGGACCTGGCCACTCGTCAGGAGCTCATGGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp ACAGCCAGGAGGAGTGAGCCAGCTTCGACTTCATGGCCGGCCTCCTaGAGGTGTCTAGCCAGTTCCTCTATATTCCAGCGCCCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: TARRSEPASTSWPAS*RCLASSSIFQRPCW
Trigger: CCAACAAGGGCGCTGGAATATAGAGGAACTGGCTAGACACCTGCAGGAGGCCGGCCATGAAGTCGAAGCTGGCTCACTCCTCCTGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CTCCAGCCCAGAACAACTTCTGCAACCAGACGGTGTACAGAGAGCTaGGGGAAAGCATCTGCCCATGCTTCCCAGGGATTCTGGGGGCGA +
Preference number: 5 (lower is better)
Translates to: LQPRTTSATRRCTES*GKASAHASQGFWGR
Trigger: TCGCCCCCAGAATCCCTGGGAAGCATGGGCAGATGCTTTCCCCCAGCTCTCTGTACACCGTCTGGTTGCAGAAGTTGTTCTGGGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp GGTTTCCAGGTGGGCAAGCGACGTCTCCAGATGAGCCAAGGCATCTaGATAGGTGGCCTGAGAACCACGACCTTCTTGGGGGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GFQVGKRRLQMSQGI*IGGLRTTTFLGVLF
Trigger: GAAGAGGACCCCCAAGAAGGTCGTGGTTCTCAGGCCACCTATCCAGATGCCTTGGCTCATCTGGAGACGTCGCTTGCCCACCTGGAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp TGCTTCAGAGATGGAATGGCCCAGATGCTCAGCTTCCCTGAGAAGTaGATCGCCGCAAGGAGGCTCCCGTCAGGAGACAGGCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: CFRDGMAQMLSFPEK*IAARRLPSGDRPIL
Trigger: CAAGATGGGCCTGTCTCCTGACGGGAGCCTCCTTGCGGCGATTCACTTCTCAGGGAAGCTGAGCATCTGGGCCATTCCATCTCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp TCCTTGTTGCTTCAGAGATGGAATGGCCCAGATGCTCAGCTTCCCTaGGAAGTGAATCGCCGCAAGGAGGCTCCCGTCAGGAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: SLLLQRWNGPDAQLP*EVNRRKEAPVRRQA
Trigger: GGCCTGTCTCCTGACGGGAGCCTCCTTGCGGCGATTCACTTCTCAGGGAAGCTGAGCATCTGGGCCATTCCATCTCTGAAGCAACAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp AGTCAGCAAGCCAGGAATATGGCGCTCCACTCCAAGGCGAACAAGTaGCAAGGCGCAGTCCACCTGCCCAGCATGGTGCTCTATGTCCTC +
Preference number: 5 (lower is better)
Translates to: SQQARNMALHSKANK*QGAVHLPSMVLYVL
Trigger: GAGGACATAGAGCACCATGCTGGGCAGGTGGACTGCGCCTTGTCACTTGTTCGCCTTGGAGTGGAGCGCCATATTCCTGGCTTGCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp TGCCTCACTGCACTGAGGGCAATGCTGAAAGTTCTGAAGACCCGGTaGGTCCCCTGGACAGCCAGGAGGAGTGAGCCAGCTTCGACTTCA +
Preference number: 5 (lower is better)
Translates to: CLTALRAMLKVLKTR*VPWTARRSEPASTS
Trigger: TGAAGTCGAAGCTGGCTCACTCCTCCTGGCTGTCCAGGGGACTCACCGGGTCTTCAGAACTTTCAGCATTGCCCTCAGTGCAGTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp CAAACACCCTTACAGTCCCTGTGCTCTCGGCATAGGCCAGCAGTGTaGAGTCGTAACTCCATGCTACCCGTCTCCACTGGGGCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: QTPLQSLCSRHRPAV*SRNSMLPVSTGALG
Trigger: ACCCAAAGCCCCAGTGGAGACGGGTAGCATGGAGTTACGACTGCACACTGCTGGCCTATGCCGAGAGCACAGGGACTGTAAGGGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp CCTATGGCGACGAGAGCCTCCAGGTCTGTGCCTTTCAAGCCATACTaGAGCAGTTCCTTGGCAGCGTCCACGTTCTCAGGAACTCTCTCC +
Preference number: 5 (lower is better)
Translates to: PMATRASRSVPFKPY*SSSLAASTFSGTLS
Trigger: GGAGAGAGTTCCTGAGAACGTGGACGCTGCCAAGGAACTGCTGCAGTATGGCTTGAAAGGCACAGACCTGGAGGCTCTCGTCGCCATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp GGAGCCTGCTTGATGAGGTGCGGATCTCCAGCCCAGAACAACTTCTaGAACCAGACGGTGTACAGAGAGCTGGGGGAAAGCATCTGCCCA +
Preference number: 5 (lower is better)
Translates to: GACLMRCGSPAQNNF*NQTVYRELGESICP
Trigger: TGGGCAGATGCTTTCCCCCAGCTCTCTGTACACCGTCTGGTTGCAGAAGTTGTTCTGGGCTGGAGATCCGCACCTCATCAAGCAGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp CCCTGTGCTCTCGGCATAGGCCAGCAGTGTGCAGTCGTAACTCCATaGTACCCGTCTCCACTGGGGCTTTGGGTCTTTTGGAACTTGACA +
Preference number: 5 (lower is better)
Translates to: PCALGIGQQCAVVTP*YPSPLGLWVFWNLT
Trigger: TGTCAAGTTCCAAAAGACCCAAAGCCCCAGTGGAGACGGGTAGCATGGAGTTACGACTGCACACTGCTGGCCTATGCCGAGAGCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp CTTGACGCCAGACTCCTTGTTGCTTCAGAGATGGAATGGCCCAGATaGTCAGCTTCCCTGAGAAGTGAATCGCCGCAAGGAGGCTCCCGT +
Preference number: 5 (lower is better)
Translates to: LDARLLVASEMEWPR*SASLRSESPQGGSR
Trigger: ACGGGAGCCTCCTTGCGGCGATTCACTTCTCAGGGAAGCTGAGCATCTGGGCCATTCCATCTCTGAAGCAACAAGGAGTCTGGCGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp CATCATCCACACCCTTTCCTATGGCGACGAGAGCCTCCAGGTCTGTaGCTTTCAAGCCATACTGCAGCAGTTCCTTGGCAGCGTCCACGT +
Preference number: 5 (lower is better)
Translates to: HHPHPFLWRREPPGL*LSSHTAAVPWQRPR
Trigger: ACGTGGACGCTGCCAAGGAACTGCTGCAGTATGGCTTGAAAGGCACAGACCTGGAGGCTCTCGTCGCCATAGGAAAGGGTGTGGATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp TCGATCGAAGTACTTCAGGCAGACATCACAGGCATGAAGCCACTCTaGGGAAGACTCCGGAGCCTGCTTGATGAGGTGCGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SIEVLQADITGMKPL*GRLRSLLDEVRISS
Trigger: GCTGGAGATCCGCACCTCATCAAGCAGGCTCCGGAGTCTTCCGCAGAGTGGCTTCATGCCTGTGATGTCTGCCTGAAGTACTTCGATCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp AAGAACACCAGGAGCTTGCCATCCTCCTCACTCAGGTGGAAGGACTaGCCCAAGAGCTGGAGCACCTGGATTCGAGGCCTCACAGGATAT +
Preference number: 5 (lower is better)
Translates to: KNTRSLPSSSLRWKD*PKSWSTWIRGLTGY
Trigger: ATATCCTGTGAGGCCTCGAATCCAGGTGCTCCAGCTCTTGGGGCAGTCCTTCCACCTGAGTGAGGAGGATGGCAAGCTCCTGGTGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp GGTGGGCAAGCGACGTCTCCAGATGAGCCAAGGCATCTGGATAGGTaGCCTGAGAACCACGACCTTCTTGGGGGTCCTCTTCTGAATTTC +
Preference number: 5 (lower is better)
Translates to: GGQATSPDEPRHLDR*PENHDLLGGPLLNF
Trigger: GAAATTCAGAAGAGGACCCCCAAGAAGGTCGTGGTTCTCAGGCCACCTATCCAGATGCCTTGGCTCATCTGGAGACGTCGCTTGCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TCCTCCTCACTCAGGTGGAAGGACTGCCCCAAGAGCTGGAGCACCTaGATTCGAGGCCTCACAGGATATGTGTCTTCAGCACAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: SSSLRWKDCPKSWST*IRGLTGYVSSAQKG
Trigger: GCCTTTCTGTGCTGAAGACACATATCCTGTGAGGCCTCGAATCCAGGTGCTCCAGCTCTTGGGGCAGTCCTTCCACCTGAGTGAGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp GAAGTTCAATGCTGCTGGGAGGGCAATGTGTCAAAGCGAAAGCCATaGGCTCCTGACGAGTGGCCAGGTCCTGGTAACCTTCTGACTGGC +
Preference number: 5 (lower is better)
Translates to: EVQCCWEGNVSKRKP*APDEWPGPGNLLTG
Trigger: GCCAGTCAGAAGGTTACCAGGACCTGGCCACTCGTCAGGAGCTCATGGCTTTCGCTTTGACACATTGCCCTCCCAGCAGCATTGAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp TACCAGGCCATCACCTTCTCCACAGTAAGCTGGGGCGTCCTGTACTaGAGTAGCTCAGGCTGCGCAGCATACAGAAACTCACTGTCATCC +
Preference number: 5 (lower is better)
Translates to: YQAITFSTVSWGVLY*SSSGCAAYRNSLSS
Trigger: GGATGACAGTGAGTTTCTGTATGCTGCGCAGCCTGAGCTACTGCAGTACAGGACGCCCCAGCTTACTGTGGAGAAGGTGATGGCCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp GCACCAGCTGGAGGATTATCCAAACAGGCGCTACACTGCATCATCTaGCCTGCAAGGTGGATGTTTTCCAGGCGACTGGAGCACAGAAGG +
Preference number: 5 (lower is better)
Translates to: APAGGLSKQALHCII*PARWMFSRRLEHRR
Trigger: CCTTCTGTGCTCCAGTCGCCTGGAAAACATCCACCTTGCAGGGCAGATGATGCAGTGTAGCGCCTGTTTGGATAATCCTCCAGCTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp ACATGGAGCCAATCGGGCATAGATCTGCAGGCTGTAGTAGTAGGCTaGCAGCTGGAGAGACAGTGCCGAATGAGCCTGCTTCTCGAAGCA +
Preference number: 5 (lower is better)
Translates to: TWSQSGIDLQAVVVG*QLERQCRMSLLLEA
Trigger: TGCTTCGAGAAGCAGGCTCATTCGGCACTGTCTCTCCAGCTGGCAGCCTACTACTACAGCCTGCAGATCTATGCCCGATTGGCTCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TCCTCAAGGCTTTCTGCCAGGCCCAGGATGGTTTCTCTTTTGTACTaGTCATCAGCAGTAAACCTCTGCACGTCCACGCCCTTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SSRLSARPRMVSLLY*SSAVNLCTSTPFRR
Trigger: CCTGCGGAAGGGCGTGGACGTGCAGAGGTTTACTGCTGATGACCAGTACAAAAGAGAAACCATCCTGGGCCTGGCAGAAAGCCTTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp ACTCTCTGCTGGCAGCCAAAACCAAGTCGATGCTTCTCTCATAGCTaGCCCTGTACTGGGCTCTTCCTTTATGGAGCGCACCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TLCWQPKPSRCFSHS*PCTGLFLYGAHQLE
Trigger: CTCCAGCTGGTGCGCTCCATAAAGGAAGAGCCCAGTACAGGGTCAGCTATGAGAGAAGCATCGACTTGGTTTTGGCTGCCAGCAGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp AGCTGGAGGATTATCCAAACAGGCGCTACACTGCATCATCTGCCCTaGAAGGTGGATGTTTTCCAGGCGACTGGAGCACAGAAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: SWRIIQTGATLHHLP*KVDVFQATGAQKAL
Trigger: GAGAGCCTTCTGTGCTCCAGTCGCCTGGAAAACATCCACCTTGCAGGGCAGATGATGCAGTGTAGCGCCTGTTTGGATAATCCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp TTATGGAGCGCACCAGCTGGAGGATTATCCAAACAGGCGCTACACTaGATCATCTGCCCTGCAAGGTGGATGTTTTCCAGGCGACTGGAG +
Preference number: 5 (lower is better)
Translates to: LWSAPAGGLSKQALH*IICPARWMFSRRLE
Trigger: CTCCAGTCGCCTGGAAAACATCCACCTTGCAGGGCAGATGATGCAGTGTAGCGCCTGTTTGGATAATCCTCCAGCTGGTGCGCTCCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp CTTCCCACTGTGAGATACTGTACCGCTGTGCCAGGGAAAGAGCGATaGTGTAGACATTTTCCTCAAGGCTTTCTGCCAGGCCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: LPTVRYCTAVPGKER*CRHFPQGFLPGPGW
Trigger: CCATCCTGGGCCTGGCAGAAAGCCTTGAGGAAAATGTCTACAGCATCGCTCTTTCCCTGGCACAGCGGTACAGTATCTCACAGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp GAGCCTCCAGGTCTGTGCCTTTCAAGCCATACTGCAGCAGTTCCTTaGCAGCGTCCACGTTCTCAGGAACTCTCTCCAAACACTCATGGA +
Preference number: 5 (lower is better)
Translates to: EPPGLCLSSHTAAVP*QRPRSQELSPNTHG
Trigger: TCCATGAGTGTTTGGAGAGAGTTCCTGAGAACGTGGACGCTGCCAAGGAACTGCTGCAGTATGGCTTGAAAGGCACAGACCTGGAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CATAGCAAGCACTGGAATCGAGGCACGTGTACACGTGCTGCTGCATaGTCAACATGTCCTGCAGCAGCATCCTCCAGTGAGACTCACCAA +
Preference number: 5 (lower is better)
Translates to: HSKHWNRGTCTRAAA*STCPAAASSSETHQ
Trigger: TTGGTGAGTCTCACTGGAGGATGCTGCTGCAGGACATGTTGACCATGCAGCAGCACGTGTACACGTGCCTCGATTCCAGTGCTTGCTATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp ATAGCTGACCCTGTACTGGGCTCTTCCTTTATGGAGCGCACCAGCTaGAGGATTATCCAAACAGGCGCTACACTGCATCATCTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: IADPVLGSSFMERTS*RIIQTGATLHHLPC
Trigger: GCAGGGCAGATGATGCAGTGTAGCGCCTGTTTGGATAATCCTCCAGCTGGTGCGCTCCATAAAGGAAGAGCCCAGTACAGGGTCAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CCAGCGCCCTTGTTGGTTGTTGGCCACAAGGTGACCAACAATATGTaGGTAGAAGGGTGTGGAGACACATTTCACCAGCAGCCTGGCATC +
Preference number: 5 (lower is better)
Translates to: PAPLLVVGHKVTNNM*VEGCGDTFHQQPGI
Trigger: GATGCCAGGCTGCTGGTGAAATGTGTCTCCACACCCTTCTACCCACATATTGTTGGTCACCTTGTGGCCAACAACCAACAAGGGCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp TCCTGGTCACAATTGGAGTCATTCACCTTAGTGACGGCTGAGATTTaGTCCAGGGCCATGGCCTGTAGACTTTCCTCACCGCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SWSQLESFTLVTAEI*SRAMACRLSSPLSR
Trigger: TCTGGAGAGCGGTGAGGAAAGTCTACAGGCCATGGCCCTGGAGCAAATCTCAGCCGTCACTAAGGTGAATGACTCCAATTGTGACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TGCACCGTGCTTTCGGTTGCCTCTGAGCTGCACTTCTGTCTCAGGTaGCCATTCGGTATTGACCAGCAAGTCATAGAGAATCGTCTCCTC +
Preference number: 5 (lower is better)
Translates to: CTVLSVASELHFCLR*PFGIDQQVIENRLL
Trigger: GAGGAGACGATTCTCTATGACTTGCTGGTCAATACCGAATGGCCACCTGAGACAGAAGTGCAGCTCAGAGGCAACCGAAAGCACGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp GGTCTTCACCTGCAACTCTCAGCAACTCAGCAAGGCCTAGCAGTTTaGCTGACTGTTTGTAGCATGTGGGGGACTGGGAAACACACTCCT +
Preference number: 5 (lower is better)
Translates to: GLHLQLSATQQGLAV*LTVCSMWGTGKHTP
Trigger: AGGAGTGTGTTTCCCAGTCCCCCACATGCTACAAACAGTCAGCCAAACTGCTAGGCCTTGCTGAGTTGCTGAGAGTTGCAGGTGAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TCAACACCTCGTCCCCTAGGCTCTGCTTGTTCTCCTCTGTACATCTaGTCAGCATCGCAGTCACTAGTCTCACCCACGGATTGTTGGCTA +
Preference number: 5 (lower is better)
Translates to: STPRPLGSACSPLYI*SASQSLVSPTDCWL
Trigger: TAGCCAACAATCCGTGGGTGAGACTAGTGACTGCGATGCTGACCAGATGTACAGAGGAGAACAAGCAGAGCCTAGGGGACGAGGTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CATTTCACCAGCAGCCTGGCATCCACCAGCAGGGAAAGCAGCTCCTaGTCACAATTGGAGTCATTCACCTTAGTGACGGCTGAGATTTGC +
Preference number: 5 (lower is better)
Translates to: HFTSSLASTSRESSS*SQLESFTLVTAEIC
Trigger: GCAAATCTCAGCCGTCACTAAGGTGAATGACTCCAATTGTGACCAGGAGCTGCTTTCCCTGCTGGTGGATGCCAGGCTGCTGGTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp CTCACTGAACAGGAACTCCAAGTGGGTCATGAAGACTTCCCACTGTaGGATACTGTACCGCTGTGCCAGGGAAAGAGCGATGCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: LTEQELQVGHEDFPL*DTVPLCQGKSDAVD
Trigger: GTCTACAGCATCGCTCTTTCCCTGGCACAGCGGTACAGTATCTCACAGTGGGAAGTCTTCATGACCCACTTGGAGTTCCTGTTCAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp TTCCCAGGGATTCTGGGGGCGAGTTTGGAAATAGATAAGATATTCTaGCTCGTGAGCACAGGCTCCAGGGCTTCCAGCGCATCCTCACTT +
Preference number: 5 (lower is better)
Translates to: FPGILGASLEIDKIF*LVSTGSRASSASSL
Trigger: AAGTGAGGATGCGCTGGAAGCCCTGGAGCCTGTGCTCACGAGTCAGAATATCTTATCTATTTCCAAACTCGCCCCCAGAATCCCTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp ATAGATCTGCAGGCTGTAGTAGTAGGCTGCCAGCTGGAGAGACAGTaGCGAATGAGCCTGCTTCTCGAAGCACTTGTTAGCATCCAACAC +
Preference number: 5 (lower is better)
Translates to: IDLQAVVVGCQLERQ*RMSLLLEALVSIQH
Trigger: GTGTTGGATGCTAACAAGTGCTTCGAGAAGCAGGCTCATTCGGCACTGTCTCTCCAGCTGGCAGCCTACTACTACAGCCTGCAGATCTAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp GGATTATCCAAACAGGCGCTACACTGCATCATCTGCCCTGCAAGGTaGATGTTTTCCAGGCGACTGGAGCACAGAAGGCTCTCCGTAAAT +
Preference number: 5 (lower is better)
Translates to: GLSKQALHCIICPAR*MFSRRLEHRRLSVN
Trigger: ATTTACGGAGAGCCTTCTGTGCTCCAGTCGCCTGGAAAACATCCACCTTGCAGGGCAGATGATGCAGTGTAGCGCCTGTTTGGATAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CTTGGGATCAACCCTGTAAAGAGGATGGCACTTGTCCCTGAAACATaGAGCCAATCGGGCATAGATCTGCAGGCTGTAGTAGTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LGINPVKRMALVPET*SQSGIDLQAVVVGC
Trigger: GCAGCCTACTACTACAGCCTGCAGATCTATGCCCGATTGGCTCCATGTTTCAGGGACAAGTGCCATCCTCTTTACAGGGTTGATCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCACCAGCTCCTCCCCATaGTCCACACTGGTGCGGACT +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVTSSSP*STLVRT
Trigger: AGTCCGCACCAGTGTGGACAATGGGGAGGAGCTGGT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp AGCCTCTGGCAACAAAACAGCATATTCGTGTGGAGAGGTGGTTTCTaGGAAGTTAGAGAGGATGGCAAGGCGATGAGGGAGCAGATGAGA +
Preference number: 5 (lower is better)
Translates to: SLWQQNSIFVWRGGF*EVREDGKAMREQMR
Trigger: TCTCATCTGCTCCCTCATCGCCTTGCCATCCTCTCTAACTTCCCAGAAACCACCTCTCCACACGAATATGCTGTTTTGTTGCCAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CTGGTCAGGCGAACCATCAGGCTGCGAGCCTCTTCGGAGCTAGATTaGGTGTTCTTCACAAATGAAACTGGTTTCTCCAGTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: LVRRTIRLRASSELD*VFFTNETGFSSPCV
Trigger: AACACATGGACTGGAGAAACCAGTTTCATTTGTGAAGAACACCCAATCTAGCTCCGAAGAGGCTCGCAGCCTGATGGTTCGCCTGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGATCCCATCCTGTTCTaGTCCCAGGCGAGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDADPILF*SQARGK
Trigger: CTTTCCCCTCGCCTGGGACAAGAACAGGATGGGATC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGCCTGGCTGCTCATCTaGACGCCAGACTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVAWLLI*TPDSLL
Trigger: CAACAAGGAGTCTGGCGTCAAGATGAGCAGCCAGGC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp CTTGATGTACCCAAAATAGCGAGCCTTGGCAGAGGTCTCAGGATCTaGGTCAGAATCCACTTCCCCTTCATCTTCTTCTCCAGCCCTCAT +
Preference number: 5 (lower is better)
Translates to: LDVPKIASLGRGLRI*VRIHFPFIFFSSPH
Trigger: ATGAGGGCTGGAGAAGAAGATGAAGGGGAAGTGGATTCTGACTCAGATCCTGAGACCTCTGCCAAGGCTCGCTATTTTGGGTACATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp CCTCGCACCAGTCTTCAGCTCGGTGTTTATGCTCAGCCCAAGGGATaGTTGTCAAGGAGTCATTGTTCCAACAAGCCTCTGGCAACAAAA +
Preference number: 5 (lower is better)
Translates to: PRTSLQLGVYAQPKG*LSRSHCSNKPLATK
Trigger: TTTTGTTGCCAGAGGCTTGTTGGAACAATGACTCCTTGACAATCATCCCTTGGGCTGAGCATAAACACCGAGCTGAAGACTGGTGCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp TTGGGAGAGATGTTGACAGGACCAATGGCCACTTCTAGCAGCTGCTaGATCATCCTTAGAGGTTGGCCATCTAAACACATGGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: LGEMLTGPMATSSSC*IILRGWPSKHMATA
Trigger: AGCTGTGGCCATGTGTTTAGATGGCCAACCTCTAAGGATGATTCAGCAGCTGCTAGAAGTGGCCATTGGTCCTGTCAACATCTCTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp TTTGTGATGATGAATGATGCACCGTGCTTTCGGTTGCCTCTGAGCTaGACTTCTGTCTCAGGTGGCCATTCGGTATTGACCAGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: FVMMNDAPCFRLPLS*TSVSGGHSVLTSKS
Trigger: TGACTTGCTGGTCAATACCGAATGGCCACCTGAGACAGAAGTGCAGCTCAGAGGCAACCGAAAGCACGGTGCATCATTCATCATCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCTCTTGGAAGGCTCTTaGTCTGCTGGGGAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDALLEGS*SAGESS
Trigger: GGAGCTTTCCCCAGCAGACAAAGAGCCTTCCAAGAG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCCAGGATTTCCAGGGCTaGGACATTACTCTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVQDFQG*DITLPS
Trigger: GCTCGGGAGAGTAATGTCCAAGCCCTGGAAATCCTG...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAAGAACACCAGGAGCTaGCCATCCTCCTCACTCAGG +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAKNTRS*PSSSLR
Trigger: CCTGAGTGAGGAGGATGGCAAGCTCCTGGTGTTCTT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp CACCGGAGCAGCGAGCCAGGGTCACTGCGCCGTCTGCCCACCAATTaGCATCAATCAATGGATAAAAGGACTCTTTATCTTTTACTTTCT +
Preference number: 5 (lower is better)
Translates to: HRSSEPGSLRRLPTN*HQSMDKRTLYLLLS
Trigger: AGAAAGTAAAAGATAAAGAGTCCTTTTATCCATTGATTGATGTCAATTGGTGGGCAGACGGCGCAGTGACCCTGGCTCGCTGCTCCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp CTTCTTAAGCTCTTCCTGCCGTTTGCTCTTGGAAGGCTCTTTGTCTaGTGGGGAAAGCTCCTCATAGGCAATGCTGTCAATGTCTATGTC +
Preference number: 5 (lower is better)
Translates to: LLKLFLPFALGRLFV*WGKLLIGNAVNVYV
Trigger: GACATAGACATTGACAGCATTGCCTATGAGGAGCTTTCCCCAGCAGACAAAGAGCCTTCCAAGAGCAAACGGCAGGAAGAGCTTAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp AGGTATGCTAAGGACTTTTTCCACCACTGCCCATCACTGACAGCCTaGAGCACAGCCTTGGTAGTAGTTGTGGTATTGGACAAGACTTTC +
Preference number: 5 (lower is better)
Translates to: RYAKDFFHHCPSLTA*STALVVVVVLDKTF
Trigger: GAAAGTCTTGTCCAATACCACAACTACTACCAAGGCTGTGCTGCAGGCTGTCAGTGATGGGCAGTGGTGGAAAAAGTCCTTAGCATACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGTCTCCACTGGGGCTTaGGGTCTTTTGGAACTTGAC +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVVSTGA*GLLELD
Trigger: GTCAAGTTCCAAAAGACCCAAAGCCCCAGTGGAGAC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTACGCCAGACTCCTTGTaGCTTCAGAGATGGAATGGC +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDATPDSL*LQRWNG
Trigger: GCCATTCCATCTCTGAAGCAACAAGGAGTCTGGCGT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAAAGCTCCTCTGGAGTaGTGGAGCGCAGACTCACAA +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVKAPLE*WSADSQ
Trigger: TTGTGAGTCTGCGCTCCACAACTCCAGAGGAGCTTT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAGCTCTTCCTGCCGTTaGCTCTTGGAAGGCTCTTTG +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSSSCR*LLEGSL
Trigger: CAAAGAGCCTTCCAAGAGCAAACGGCAGGAAGAGCT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCCTGCAGCACAGCCTaGGTAGTAGTTGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAACSTA*VVVVVL
Trigger: CAATACCACAACTACTACCAAGGCTGTGCTGCAGGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCGTGGTTGGAAACACTaGTGTCTGAGCCTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDARGWKH*CLSLCQ
Trigger: CTGACAGAGGCTCAGACACAAGTGTTTCCAACCACG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTCCTTGGGAGAGATGTaGACAGGACCAATGGCCACT +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVSLGEM*TGPMAT
Trigger: AGTGGCCATTGGTCCTGTCAACATCTCTCCCAAGGA...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTCCCCTAGGCTCTGCTaGTTCTCCTCTGTACATCTG +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDASPRLC*FSSVHL
Trigger: CAGATGTACAGAGGAGAACAAGCAGAGCCTAGGGGA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp GCTTGCCATTGTTTGCGAGTACCAAATGCCAGTTTATCTGTTTATTaGCCAAGCGAACCAGTCCATCAGGAAGCAAAAACGGAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: ACHCLRVPNASLSVY*PSEPVHQEAKTEQG
Trigger: GCCCTGCTCCGTTTTTGCTTCCTGATGGACTGGTTCGCTTGGTCAATAAACAGATAAACTGGCATTTGGTACTCGCAAACAATGGCAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp CTTGCTAGTTGCAAGAGAACTTCCGTGGTTGGAAACACTTGTGTCTaGGCCTCTGTCAGCTTTCCAGTTCTCAGCAACACTTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LASCKRTSVVGNTCV*ASVSFPVLSNTSAK
Trigger: CTTTGCTGAAGTGTTGCTGAGAACTGGAAAGCTGACAGAGGCTCAGACACAAGTGTTTCCAACCACGGAAGTTCTCTTGCAACTAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp TTAATTCCTTGGGATCAACCCTGTAAAGAGGATGGCACTTGTCCCTaGAACATGGAGCCAATCGGGCATAGATCTGCAGGCTGTAGTAGT +
Preference number: 5 (lower is better)
Translates to: LIPWDQPCKEDGTCP*NMEPIGHRSAGCSS
Trigger: ACTACTACAGCCTGCAGATCTATGCCCGATTGGCTCCATGTTTCAGGGACAAGTGCCATCCTCTTTACAGGGTTGATCCCAAGGAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp TCCTGGACAGCAGCCAGAAGCTTGCCATTGTTTGCGAGTACCAAATaGCAGTTTATCTGTTTATTGACCAAGCGAACCAGTCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: SWTAARSLPLFASTK*QFICLLTKRTSPSG
Trigger: TCCTGATGGACTGGTTCGCTTGGTCAATAAACAGATAAACTGGCATTTGGTACTCGCAAACAATGGCAAGCTTCTGGCTGCTGTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp ATTCTGCATTCCAACTCCTCGCACCAGTCTTCAGCTCGGTGTTTATaGTCAGCCCAAGGGATGATTGTCAAGGAGTCATTGTTCCAACAA +
Preference number: 5 (lower is better)
Translates to: ILHSNSSHQSSARCL*SAQGMIVKESLFQQ
Trigger: TTGTTGGAACAATGACTCCTTGACAATCATCCCTTGGGCTGAGCATAAACACCGAGCTGAAGACTGGTGCGAGGAGTTGGAATGCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TGTCATTCGGCAAAGCATCACTTGCTAGTTGCAAGAGAACTTCCGTaGTTGGAAACACTTGTGTCTGAGCCTCTGTCAGCTTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: CHSAKHHLLVARELP*LETLVSEPLSAFQF
Trigger: GAACTGGAAAGCTGACAGAGGCTCAGACACAAGTGTTTCCAACCACGGAAGTTCTCTTGCAACTAGCAAGTGATGCTTTGCCGAATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAGGTTGGTGGAAGAGTaGAAGTACTCTCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDARLVEE*KYSLLA
Trigger: TGCCAGCAGAGAGTACTTCAACTCTTCCACCAACCT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAGAACACAAGCGTACTaGCAAAGGCAGGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVRTQAY*QRQGLH
Trigger: GTGAAGACCCTGCCTTTGCAAGTACGCTTGTGTTCT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp CACACTGAGAATTTTCTCCAGTTGGTCTACCATGTCATGAAGAGATaGGGTTACCTTTGTATTATGCCCACACCCCCTTTGTGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: HTENFLQLVYHVMKR*GYLCIMPTPPLWEA
Trigger: TGCCTCCCACAAAGGGGGTGTGGGCATAATACAAAGGTAACCTCATCTCTTCATGACATGGTAGACCAACTGGAGAAAATTCTCAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CTAGCAGCTGCTGAATCATCCTTAGAGGTTGGCCATCTAAACACATaGCCACAGCTTGGTCATGAATTTTCTCCTTTTCTGACCGTGACA +
Preference number: 5 (lower is better)
Translates to: LAAAESSLEVGHLNT*PQLGHEFSPFLTVT
Trigger: TGTCACGGTCAGAAAAGGAGAAAATTCATGACCAAGCTGTGGCCATGTGTTTAGATGGCCAACCTCTAAGGATGATTCAGCAGCTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGGGGCTTTGGGTCTTTaGGAACTTGACATTTCCCAA +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAGALGL*ELDISQ
Trigger: TTGGGAAATGTCAAGTTCCAAAAGACCCAAAGCCCC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAGGCGAGGGGAAAGCTaGACACTTAGCAGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVRRGES*TLSSFN
Trigger: ATTAAAGCTGCTAAGTGTCAAGCTTTCCCCTCGCCT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTTGACGCCAGACTCCTaGTTGCTTCAGAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDALTPDS*LLQRWN
Trigger: ATTCCATCTCTGAAGCAACAAGGAGTCTGGCGTCAA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTATTGTCAAGGAGTCATaGTTCCAACAAGCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAIVKES*FQQASG
Trigger: GCCAGAGGCTTGTTGGAACAATGACTCCTTGACAAT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTTGGGAAACACACTCCTaGATGAGACTGATTCGGTCA +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAWETHS*MRLIRS
Trigger: TGACCGAATCAGTCTCATCAAGGAGTGTGTTTCCCA...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAGACTTTCATGGTGGTaGCAGTGGTCCAGTGTAACA +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDARLSWW*QWSSVT
Trigger: TGTTACACTGGACCACTGCAACCACCATGAAAGTCT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCAGAGAACTTCCGTGGTaGGAAACACTTGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVRELPW*ETLVSE
Trigger: CTCAGACACAAGTGTTTCCAACCACGGAAGTTCTCT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCAGTTGTTTCAAAGTaGGCACAACCACAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAAVVSK*AQPQLS
Trigger: GGAAAGCTGTGGTTGTGCCAACTTTGAAACAACTGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGCTTCTACTGACAGCTaGGACACAGCTTTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAASTDS*DTAFGE
Trigger: TTCTCCAAAAGCTGTGTCCAAGCTGTCAGTAGAAGC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAGCTCCTGGTCACAATaGGAGTCATTCACCTTAGTG +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDASSWSQ*ESFTLV
Trigger: CACTAAGGTGAATGACTCCAATTGTGACCAGGAGCT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp GAGAACCCAAGACCGCTTCTTGATTTTACTCAAGTAATTGTGAATTaGAGCACTGTTGACAGCGGACTTCCTCCACTGCCTCTGATAGAC +
Preference number: 5 (lower is better)
Translates to: ENPRPLLDFTQVIVN*STVDSGLPPLPLID
Trigger: GTCTATCAGAGGCAGTGGAGGAAGTCCGCTGTCAACAGTGCTTCAATTCACAATTACTTGAGTAAAATCAAGAAGCGGTCTTGGGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp ATAATTGATGTAAAATCATCTTTTGCAGACCTGATCTCCACACACTaGTCCTGGACAGCAGCCAGAAGCTTGCCATTGTTTGCGAGTACC +
Preference number: 5 (lower is better)
Translates to: IIDVKSSFADLISTH*SWTAARSLPLFAST
Trigger: GGTACTCGCAAACAATGGCAAGCTTCTGGCTGCTGTCCAGGACCAGTGTGTGGAGATCAGGTCTGCAAAAGATGATTTTACATCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp GTTTCTCACAGCGGTGGAGAAAGGGAACCATCCACTGGTAAGCACTaGTCACATAATTGTCCTCAGAACAATGCTCCATCAGTAATCTTA +
Preference number: 5 (lower is better)
Translates to: VSHSGGEREPSTGKH*SHNCPQNNAPSVIL
Trigger: TAAGATTACTGATGGAGCATTGTTCTGAGGACAATTATGTGACCAGTGCTTACCAGTGGATGGTTCCCTTTCTCCACCGCTGTGAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGAAACTGTGACTCTCTaGGTAGCTCTGATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVETVTL*VALICS
Trigger: GGAACAAATCAGAGCTACCAAGAGAGTCACAGTTTC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCCCGAGCATACGTTCTaGCTGAGAGAACAATATTCT +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAPEHTF*LREQYS
Trigger: AGAATATTGTTCTCTCAGCAAGAACGTATGCTCGGG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTAAAGAGGTGAAGGGTTaGGGCTCGCTTTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAKEVKG*GSLFNF
Trigger: GAAATTGAAAAGCGAGCCCAAACCCTTCACCTCTTT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTACACATGGCCACAGCTaGGTCATGAATTTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDATHGHS*VMNFLL
Trigger: AAGGAGAAAATTCATGACCAAGCTGTGGCCATGTGT...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTGTATGCACTATATCCTaGGGAGAGATGTTGACAGGA +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAVCTIS*GEMLTG
Trigger: TCCTGTCAACATCTCTCCCAAGGATATAGTGCATAC...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp AGCTCTGACACACTGAGAATTTTCTCCAGTTGGTCTACCATGTCATaGAGAGATGAGGTTACCTTTGTATTATGCCCACACCCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SSDTLRIFSSWSTMS*RDEVTFVLCPHPLC
Trigger: ACAAAGGGGGTGTGGGCATAATACAAAGGTAACCTCATCTCTTCATGACATGGTAGACCAACTGGAGAAAATTCTCAGTGTGTCAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 90 bp GACCCACAGAGATCAGCACTGCCACCACTCAATGCAGAAATTATTTaGGTGATTGCAGTATGCACTATATCCTTGGGAGAGATGTTGACA +
Preference number: 5 (lower is better)
Translates to: DPQRSALPPLNAEII*VIAVCTISLGEMLT
Trigger: TGTCAACATCTCTCCCAAGGATATAGTGCATACTGCAATCACTCAAATAATTTCTGCATTGAGTGGTGGCAGTGCTGATCTCTGTGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp TCTCAAAGTTCACTCTTTGATAAAGAATCTCTGTTTGAAGAGAGCTaGTGGCTTCCAAGAGAAGTTCAATGCTGCTGGGAGGGCAATGTG +
Preference number: 5 (lower is better)
Translates to: SQSSLFDKESLFEES*WLPREVQCCWEGNV
Trigger: CACATTGCCCTCCCAGCAGCATTGAACTTCTCTTGGAAGCCAGCAGCTCTCTTCAAACAGAGATTCTTTATCAAAGAGTGAACTTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TTCTTCATAGTCTTCACTGTCAATCTTTCTCTGATAAAGCTCCTCTaGAGTTGTGGAGCGCAGACTCACAAGGCGGTAGTTCTTTGTGAT +
Preference number: 5 (lower is better)
Translates to: FFIVFTVNLSLIKLL*SCGAQTHKAVVLCD
Trigger: ATCACAAAGAACTACCGCCTTGTGAGTCTGCGCTCCACAACTCCAGAGGAGCTTTATCAGAGAAAGATTGACAGTGAAGACTATGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CAAAGTTCACTCTTTGATAAAGAATCTCTGTTTGAAGAGAGCTGCTaGCTTCCAAGAGAAGTTCAATGCTGCTGGGAGGGCAATGTGTCA +
Preference number: 5 (lower is better)
Translates to: QSSLFDKESLFEESC*LPREVQCCWEGNVS
Trigger: TGACACATTGCCCTCCCAGCAGCATTGAACTTCTCTTGGAAGCCAGCAGCTCTCTTCAAACAGAGATTCTTTATCAAAGAGTGAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCAGTTTATCTGTTTATaGACCAAGCGAACCAGTCCA +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAQFICL*TKRTSP
Trigger: TGGACTGGTTCGCTTGGTCAATAAACAGATAAACTG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGGATTTCCTCATATGTaGCAAGACGATCTAAGAAGG +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVGFPHM*QDDLRR
Trigger: CCTTCTTAGATCGTCTTGCAACATATGAGGAAATCC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCGTAGTAGTTGTGGTATaGGACAAGACTTTCATGGTG +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVVVVVV*DKTFMV
Trigger: CACCATGAAAGTCTTGTCCAATACCACAACTACTAC...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 90 bp GAGATCAGCACTGCCACCACTCAATGCAGAAATTATTTGAGTGATTaGAGTATGCACTATATCCTTGGGAGAGATGTTGACAGGACCAAT +
Preference number: 5 (lower is better)
Translates to: EISTATTQCRNYLSD*SMHYILGRDVDRTN
Trigger: ATTGGTCCTGTCAACATCTCTCCCAAGGATATAGTGCATACTGCAATCACTCAAATAATTTCTGCATTGAGTGGTGGCAGTGCTGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp GAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCTGATGCTCACTGTGCACTGGCTTaGTATTCTAAAAATACCAAC +
Preference number: 5 (lower is better)
Translates to: EQLIATNAASGMALGSDAHCALA*YSKNTN
Trigger: GTTGGTATTTTTAGAATACAAAGCCAGTGCACAGTG...AGCATCAGACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS-3UTR CAA 90 bp ATGCTGAGAACAATTAATTGCTACAAATGCTGCTTCGGGCATGGCTTTGGGGTCATTCTGGGGGCGAGTTaGGAAATAGATAAGATATTC +
Preference number: 5 (lower is better)
Translates to: MLRTINCYKCCFGHGFGVILGAS*EIDKIF
Trigger: GAATATCTTATCTATTTCCAAACTCGCCCCCAGAAT...GACCCCAAAGCCATGCCCGAAGCAGCATTTGTAGCAATTAATTGTTCTCAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp CTGACTCATAAAAAGGGTGACATCCTTGTCTTTCTAGGTCATCATTaGCTACAATTCCAATTCGATATGCTCTACCAAATTCCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LTHKKGDILVFLGHH*LQFQFDMLYQIPAP
Trigger: AGGGGCAGGAATTTGGTAGAGCATATCGAATTGGAATTGTAGCCAATGATGACCTAGAAAGACAAGGATGTCACCCTTTTTATGAGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 90 bp TTAAGACCTGATGCAACAACTTTAAATTTCTTCAGCAGACGAATGTaGATTTCTGGTTTAATAGCAGTTGTTTCAAAGTTGGCACAACCA +
Preference number: 5 (lower is better)
Translates to: LRPDATTLNFFSRRM*ISGLIAVVSKLAQP
Trigger: TGGTTGTGCCAACTTTGAAACAACTGCTATTAAACCAGAAATCCACATTCGTCTGCTGAAGAAATTTAAAGTTGTTGCATCAGGTCTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp CCGCAAGGAGGCTCCCGTCAGGAGACAGGCCCATCTTaGAGATCCCATCCTGTTCTTGTCCCAGGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: PQGGSRQETGPS*RSHPVLVPGEG
Trigger: CCCCTCGCCTGGGACAAGAACAGGATGGGATCTTCAAGATGGGCCTGTCTCCTGACGGGAGCCTCCTTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp CTGGTGCGGACTGCCCCAACAACACCTTCTAGGACCTaGAGGGGGTCGCGTGACCCACAGAGATCAGCACTG +
Preference number: 6 (lower is better)
Translates to: LVRTAPTTPSRT*RGSRDPQRSAL
Trigger: CAGTGCTGATCTCTGTGGGTCACGCGACCCCCTCCAGGTCCTAGAAGGTGTTGTTGGGGCAGTCCGCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp GCCAGGAATATGGCGCTCCACTCCAAGGCGAACAAGTaGCAAGGCGCAGTCCACCTGCCCAGCATGGTGCTC +
Preference number: 6 (lower is better)
Translates to: ARNMALHSKANK*QGAVHLPSMVL
Trigger: GAGCACCATGCTGGGCAGGTGGACTGCGCCTTGTCACTTGTTCGCCTTGGAGTGGAGCGCCATATTCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp AGGAGCTTGCCATCCTCCTCACTCAGGTGGAAGGACTaGCCCAAGAGCTGGAGCACCTGGATTCGAGGCCTC +
Preference number: 6 (lower is better)
Translates to: RSLPSSSLRWKD*PKSWSTWIRGL
Trigger: GAGGCCTCGAATCCAGGTGCTCCAGCTCTTGGGGCAGTCCTTCCACCTGAGTGAGGAGGATGGCAAGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp GATGGAATGGCCCAGATGCTCAGCTTCCCTGAGAAGTaGATCGCCGCAAGGAGGCTCCCGTCAGGAGACAGG +
Preference number: 6 (lower is better)
Translates to: DGMAQMLSFPEK*IAARRLPSGDR
Trigger: CCTGTCTCCTGACGGGAGCCTCCTTGCGGCGATTCACTTCTCAGGGAAGCTGAGCATCTGGGCCATTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp GAGCTCCTGACGAGTGGCCAGGTCCTGGTAACCTTCTaGCTGGCCCAACTGGCTACACACAGCCCAACTCTC +
Preference number: 6 (lower is better)
Translates to: ELLTSGQVLVTF*LAQLATHSPTL
Trigger: GAGAGTTGGGCTGTGTGTAGCCAGTTGGGCCAGTCAGAAGGTTACCAGGACCTGGCCACTCGTCAGGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp GCACTGAGGGCAATGCTGAAAGTTCTGAAGACCCGGTaGGTCCCCTGGACAGCCAGGAGGAGTGAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: ALRAMLKVLKTR*VPWTARRSEPA
Trigger: AGCTGGCTCACTCCTCCTGGCTGTCCAGGGGACTCACCGGGTCTTCAGAACTTTCAGCATTGCCCTCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CAGCAGACACCAGCTCCTCCCCATTGTCCACACTGGTaGGGACTGCCCCAACAACACCTTCTAGGACCTGGA +
Preference number: 6 (lower is better)
Translates to: QQTPAPPHCPHW*GLPQQHLLGPG
Trigger: TCCAGGTCCTAGAAGGTGTTGTTGGGGCAGTCCGCACCAGTGTGGACAATGGGGAGGAGCTGGTGTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp GTGGGCAAGCGACGTCTCCAGATGAGCCAAGGCATCTaGATAGGTGGCCTGAGAACCACGACCTTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: VGKRRLQMSQGI*IGGLRTTTFLG
Trigger: CCCCAAGAAGGTCGTGGTTCTCAGGCCACCTATCCAGATGCCTTGGCTCATCTGGAGACGTCGCTTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp CATGCTGCTCTGAGAATGGCTTCCGTTCGGAAGAACACCAGGAGCTaGCCATCCTCCTCACTCAGGTGGAAGGACTGCCCCAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: HAALRMASVRKNTRS*PSSSLRWKDCPKSW
Trigger: CCAGCTCTTGGGGCAGTCCTTCCACCTGAGTGAGGAGGATGGCAAGCTCCTGGTGTTCTTCCGAACGGAAGCCATTCTCAGAGCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp CTTCAGAGATGGAATGGCCCAGATGCTCAGCTTCCCTaGGAAGTGAATCGCCGCAAGGAGGCTCCCGTCAGG +
Preference number: 6 (lower is better)
Translates to: LQRWNGPDAQLP*EVNRRKEAPVR
Trigger: CCTGACGGGAGCCTCCTTGCGGCGATTCACTTCTCAGGGAAGCTGAGCATCTGGGCCATTCCATCTCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CTCGGCATAGGCCAGCAGTGTGCAGTCGTAACTCCATaGTACCCGTCTCCACTGGGGCTTTGGGTCTTTTGG +
Preference number: 6 (lower is better)
Translates to: LGIGQQCAVVTP*YPSPLGLWVFW
Trigger: CCAAAAGACCCAAAGCCCCAGTGGAGACGGGTAGCATGGAGTTACGACTGCACACTGCTGGCCTATGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp TTACAGTCCCTGTGCTCTCGGCATAGGCCAGCAGTGTaGAGTCGTAACTCCATGCTACCCGTCTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: LQSLCSRHRPAV*SRNSMLPVSTG
Trigger: CCCAGTGGAGACGGGTAGCATGGAGTTACGACTGCACACTGCTGGCCTATGCCGAGAGCACAGGGACTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp GCAGTCCACCTGCCCAGCATGGTGCTCTATGTCCTCTaGTCTGCTCTGATACCAGGCCATCACCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: AVHLPSMVLYVL*SALIPGHHLLH
Trigger: GTGGAGAAGGTGATGGCCTGGTATCAGAGCAGAGCAGAGGACATAGAGCACCATGCTGGGCAGGTGGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CACTCTGCGGAAGACTCCGGAGCCTGCTTGATGAGGTaGGGATCTCCAGCCCAGAACAACTTCTGCAACCAG +
Preference number: 6 (lower is better)
Translates to: HSAEDSGACLMR*GSPAQNNFCNQ
Trigger: CTGGTTGCAGAAGTTGTTCTGGGCTGGAGATCCGCACCTCATCAAGCAGGCTCCGGAGTCTTCCGCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp AGGAGTGAGCCAGCTTCGACTTCATGGCCGGCCTCCTaGAGGTGTCTAGCCAGTTCCTCTATATTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: RSEPASTSWPAS*RCLASSSIFQR
Trigger: GCGCTGGAATATAGAGGAACTGGCTAGACACCTGCAGGAGGCCGGCCATGAAGTCGAAGCTGGCTCACTCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp GCGACGTCTCCAGATGAGCCAAGGCATCTGGATAGGTaGCCTGAGAACCACGACCTTCTTGGGGGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: ATSPDEPRHLDR*PENHDLLGGPL
Trigger: AAGAGGACCCCCAAGAAGGTCGTGGTTCTCAGGCCACCTATCCAGATGCCTTGGCTCATCTGGAGACGTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp CTTCAGCAGACACCAGCTCCTCCCCATTGTCCACACTaGTGCGGACTGCCCCAACAACACCTTCTAGGACCT +
Preference number: 6 (lower is better)
Translates to: LQQTPAPPHCPH*CGLPQQHLLGP
Trigger: AGGTCCTAGAAGGTGTTGTTGGGGCAGTCCGCACCAGTGTGGACAATGGGGAGGAGCTGGTGTCTGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp CTGAGAATGGCTTCCGTTCGGAAGAACACCAGGAGCTaGCCATCCTCCTCACTCAGGTGGAAGGACTGCCCC +
Preference number: 6 (lower is better)
Translates to: LRMASVRKNTRS*PSSSLRWKDCP
Trigger: GGGGCAGTCCTTCCACCTGAGTGAGGAGGATGGCAAGCTCCTGGTGTTCTTCCGAACGGAAGCCATTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp AGCAGCCTGGCATCCACCAGCAGGGAAAGCAGCTCCTGGTCACAATaGGAGTCATTCACCTTAGTGACGGCTGAGATTTGCTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SSLASTSRESSSWSQ*ESFTLVTAEICSRA
Trigger: GGCCCTGGAGCAAATCTCAGCCGTCACTAAGGTGAATGACTCCAATTGTGACCAGGAGCTGCTTTCCCTGCTGGTGGATGCCAGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TGCATGGTCAACATGTCCTGCAGCAGCATCCTCCAGTaGGACTCACCAACAGAAGGCTGCTTCCGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: CMVNMSCSSILQ*DSPTEGCFRPV
Trigger: CACTGGGCGGAAGCAGCCTTCTGTTGGTGAGTCTCACTGGAGGATGCTGCTGCAGGACATGTTGACCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TGCTGCTGGGAGGGCAATGTGTCAAAGCGAAAGCCATaGGCTCCTGACGAGTGGCCAGGTCCTGGTAACCTT +
Preference number: 6 (lower is better)
Translates to: CCWEGNVSKRKP*APDEWPGPGNL
Trigger: AAGGTTACCAGGACCTGGCCACTCGTCAGGAGCTCATGGCTTTCGCTTTGACACATTGCCCTCCCAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp ACGAGAGCCTCCAGGTCTGTGCCTTTCAAGCCATACTaGAGCAGTTCCTTGGCAGCGTCCACGTTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: TRASRSVPFKPY*SSSLAASTFSG
Trigger: TCCTGAGAACGTGGACGCTGCCAAGGAACTGCTGCAGTATGGCTTGAAAGGCACAGACCTGGAGGCTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CACCCTTTCCTATGGCGACGAGAGCCTCCAGGTCTGTaGCTTTCAAGCCATACTGCAGCAGTTCCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: HPFLWRREPPGL*LSSHTAAVPWQ
Trigger: CTGCCAAGGAACTGCTGCAGTATGGCTTGAAAGGCACAGACCTGGAGGCTCTCGTCGCCATAGGAAAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp GTAAGCTGGGGCGTCCTGTACTGCAGTAGCTCAGGCTaGGCAGCATACAGAAACTCACTGTCATCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VSWGVLYCSSSG*AAYRNSLSSCR
Trigger: CCTGCAGGATGACAGTGAGTTTCTGTATGCTGCGCAGCCTGAGCTACTGCAGTACAGGACGCCCCAGCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CAAGCACTGGAATCGAGGCACGTGTACACGTGCTGCTaGATGGTCAACATGTCCTGCAGCAGCATCCTCCAG +
Preference number: 6 (lower is better)
Translates to: QALESRHVYTCC*MVNMSCSSILQ
Trigger: CTGGAGGATGCTGCTGCAGGACATGTTGACCATGCAGCAGCACGTGTACACGTGCCTCGATTCCAGTGCTTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CAACTGGCTACACACAGCCCAACTCTCTGGGTAGCCTaGGGCCATCAGCTGCTGACAGTACATACTGGCTAC +
Preference number: 6 (lower is better)
Translates to: QLATHSPTLWVA*GHQLLTVHTGY
Trigger: GTAGCCAGTATGTACTGTCAGCAGCTGATGGCCGCAGGCTACCCAGAGAGTTGGGCTGTGTGTAGCCAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp GTTTCTCTTTTGTACTGGTCATCAGCAGTAAACCTCTaGACGTCCACGCCCTTCCGCAGGCCCTGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: VSLLYWSSAVNL*TSTPFRRPWRS
Trigger: GCTCCTCCAGGGCCTGCGGAAGGGCGTGGACGTGCAGAGGTTTACTGCTGATGACCAGTACAAAAGAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp CACTGGAATCGAGGCACGTGTACACGTGCTGCTGCATaGTCAACATGTCCTGCAGCAGCATCCTCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: HWNRGTCTRAAA*STCPAAASSSE
Trigger: CTCACTGGAGGATGCTGCTGCAGGACATGTTGACCATGCAGCAGCACGTGTACACGTGCCTCGATTCCAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp AAGAACACCAGGAGCTTGCCATCCTCCTCACTCAGGTaGAAGGACTGCCCCAAGAGCTGGAGCACCTGGATT +
Preference number: 6 (lower is better)
Translates to: KNTRSLPSSSLR*KDCPKSWSTWI
Trigger: AATCCAGGTGCTCCAGCTCTTGGGGCAGTCCTTCCACCTGAGTGAGGAGGATGGCAAGCTCCTGGTGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp ACAGCTCCTTCACACCCTCCACGGGGAGCATCTGTGTaGTGTTGTAGAGGGAGCGGCAGATCTTCAACACCT +
Preference number: 6 (lower is better)
Translates to: TAPSHPPRGASV*CCRGSGRSSTP
Trigger: AGGTGTTGAAGATCTGCCGCTCCCTCTACAACACCACACAGATGCTCCCCGTGGAGGGTGTGAAGGAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp TGCACCGGAGCAGCGAGCCAGGGTCACTGCGCCGTCTaGCCACCAATTGACATCAATCAATGGATAAAAGGA +
Preference number: 6 (lower is better)
Translates to: CTGAASQGHCAV*PPIDINQWIKG
Trigger: TCCTTTTATCCATTGATTGATGTCAATTGGTGGGCAGACGGCGCAGTGACCCTGGCTCGCTGCTCCGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CAGGCTGTAGTAGTAGGCTGCCAGCTGGAGAGACAGTaGCGAATGAGCCTGCTTCTCGAAGCACTTGTTAGC +
Preference number: 6 (lower is better)
Translates to: QAVVVGCQLERQ*RMSLLLEALVS
Trigger: GCTAACAAGTGCTTCGAGAAGCAGGCTCATTCGGCACTGTCTCTCCAGCTGGCAGCCTACTACTACAGCCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CAATCGGGCATAGATCTGCAGGCTGTAGTAGTAGGCTaGCAGCTGGAGAGACAGTGCCGAATGAGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: QSGIDLQAVVVG*QLERQCRMSLL
Trigger: AAGCAGGCTCATTCGGCACTGTCTCTCCAGCTGGCAGCCTACTACTACAGCCTGCAGATCTATGCCCGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp TTGATGAGGTGCGGATCTCCAGCCCAGAACAACTTCTaGAACCAGACGGTGTACAGAGAGCTGGGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: LMRCGSPAQNNF*NQTVYRELGES
Trigger: GCTTTCCCCCAGCTCTCTGTACACCGTCTGGTTGCAGAAGTTGTTCTGGGCTGGAGATCCGCACCTCATCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp AAACAGGCGCTACACTGCATCATCTGCCCTGCAAGGTaGATGTTTTCCAGGCGACTGGAGCACAGAAGGCTC +
Preference number: 6 (lower is better)
Translates to: KQALHCIICPAR*MFSRRLEHRRL
Trigger: GAGCCTTCTGTGCTCCAGTCGCCTGGAAAACATCCACCTTGCAGGGCAGATGATGCAGTGTAGCGCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp CGTCCCCTAGGCTCTGCTTGTTCTCCTCTGTACATCTaGTCAGCATCGCAGTCACTAGTCTCACCCACGGAT +
Preference number: 6 (lower is better)
Translates to: RPLGSACSPLYI*SASQSLVSPTD
Trigger: ATCCGTGGGTGAGACTAGTGACTGCGATGCTGACCAGATGTACAGAGGAGAACAAGCAGAGCCTAGGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp AGCAGCCTGGCATCCACCAGCAGGGAAAGCAGCTCCTaGTCACAATTGGAGTCATTCACCTTAGTGACGGCT +
Preference number: 6 (lower is better)
Translates to: SSLASTSRESSS*SQLESFTLVTA
Trigger: AGCCGTCACTAAGGTGAATGACTCCAATTGTGACCAGGAGCTGCTTTCCCTGCTGGTGGATGCCAGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp AGAGCCTCCAGGTCTGTGCCTTTCAAGCCATACTGCAGCAGTTCCTaGGCAGCGTCCACGTTCTCAGGAACTCTCTCCAAACACTCATGG +
Preference number: 6 (lower is better)
Translates to: RASRSVPFKPYCSSS*AASTFSGTLSKHSW
Trigger: CCATGAGTGTTTGGAGAGAGTTCCTGAGAACGTGGACGCTGCCAAGGAACTGCTGCAGTATGGCTTGAAAGGCACAGACCTGGAGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp GGAGGATTATCCAAACAGGCGCTACACTGCATCATCTaGCCTGCAAGGTGGATGTTTTCCAGGCGACTGGAG +
Preference number: 6 (lower is better)
Translates to: GGLSKQALHCII*PARWMFSRRLE
Trigger: CTCCAGTCGCCTGGAAAACATCCACCTTGCAGGGCAGATGATGCAGTGTAGCGCCTGTTTGGATAATCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp GCACCAGCTGGAGGATTATCCAAACAGGCGCTACACTaGATCATCTGCCCTGCAAGGTGGATGTTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: APAGGLSKQALH*IICPARWMFSR
Trigger: CCTGGAAAACATCCACCTTGCAGGGCAGATGATGCAGTGTAGCGCCTGTTTGGATAATCCTCCAGCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp GGTCTGTGCCTTTCAAGCCATACTGCAGCAGTTCCTTaGCAGCGTCCACGTTCTCAGGAACTCTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: GLCLSSHTAAVP*QRPRSQELSPN
Trigger: GTTTGGAGAGAGTTCCTGAGAACGTGGACGCTGCCAAGGAACTGCTGCAGTATGGCTTGAAAGGCACAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp CTTTCTGCCAGGCCCAGGATGGTTTCTCTTTTGTACTaGTCATCAGCAGTAAACCTCTGCACGTCCACGCCC +
Preference number: 6 (lower is better)
Translates to: LSARPRMVSLLY*SSAVNLCTSTP
Trigger: GGGCGTGGACGTGCAGAGGTTTACTGCTGATGACCAGTACAAAAGAGAAACCATCCTGGGCCTGGCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp AGAACAACTTCTGCAACCAGACGGTGTACAGAGAGCTaGGGGAAAGCATCTGCCCATGCTTCCCAGGGATTC +
Preference number: 6 (lower is better)
Translates to: RTTSATRRCTES*GKASAHASQGF
Trigger: GAATCCCTGGGAAGCATGGGCAGATGCTTTCCCCCAGCTCTCTGTACACCGTCTGGTTGCAGAAGTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp GTAGCCTGGCTGCTCATCTTGACGCCAGACTCCTTGTaGCTTCAGAGATGGAATGGCCCAGATGCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: VAWLLILTPDSL*LQRWNGPDAQL
Trigger: AAGCTGAGCATCTGGGCCATTCCATCTCTGAAGCAACAAGGAGTCTGGCGTCAAGATGAGCAGCCAGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TGGCAGCCAAAACCAAGTCGATGCTTCTCTCATAGCTaGCCCTGTACTGGGCTCTTCCTTTATGGAGCGCAC +
Preference number: 6 (lower is better)
Translates to: WQPKPSRCFSHS*PCTGLFLYGAH
Trigger: GTGCGCTCCATAAAGGAAGAGCCCAGTACAGGGTCAGCTATGAGAGAAGCATCGACTTGGTTTTGGCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TGGGATCAACCCTGTAAAGAGGATGGCACTTGTCCCTaGAACATGGAGCCAATCGGGCATAGATCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: WDQPCKEDGTCP*NMEPIGHRSAG
Trigger: GCCTGCAGATCTATGCCCGATTGGCTCCATGTTTCAGGGACAAGTGCCATCCTCTTTACAGGGTTGATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp CAGGAACTCCAAGTGGGTCATGAAGACTTCCCACTGTaGGATACTGTACCGCTGTGCCAGGGAAAGAGCGAT +
Preference number: 6 (lower is better)
Translates to: QELQVGHEDFPL*DTVPLCQGKSD
Trigger: ATCGCTCTTTCCCTGGCACAGCGGTACAGTATCTCACAGTGGGAAGTCTTCATGACCCACTTGGAGTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp ATTATCCAAACAGGCGCTACACTGCATCATCTGCCCTaGAAGGTGGATGTTTTCCAGGCGACTGGAGCACAG +
Preference number: 6 (lower is better)
Translates to: IIQTGATLHHLP*KVDVFQATGAQ
Trigger: CTGTGCTCCAGTCGCCTGGAAAACATCCACCTTGCAGGGCAGATGATGCAGTGTAGCGCCTGTTTGGATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp GTGAGATACTGTACCGCTGTGCCAGGGAAAGAGCGATaGTGTAGACATTTTCCTCAAGGCTTTCTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: VRYCTAVPGKER*CRHFPQGFLPG
Trigger: GCCTGGCAGAAAGCCTTGAGGAAAATGTCTACAGCATCGCTCTTTCCCTGGCACAGCGGTACAGTATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp ATTGTAGCCTGGCTGCTCATCTTGACGCCAGACTCCTaGTTGCTTCAGAGATGGAATGGCCCAGATGCTCAG +
Preference number: 6 (lower is better)
Translates to: IVAWLLILTPDS*LLQRWNGPDAQ
Trigger: CTGAGCATCTGGGCCATTCCATCTCTGAAGCAACAAGGAGTCTGGCGTCAAGATGAGCAGCCAGGCTACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp AGGTCTGTGCCTTTCAAGCCATACTGCAGCAGTTCCTaGGCAGCGTCCACGTTCTCAGGAACTCTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: RSVPFKPYCSSS*AASTFSGTLSK
Trigger: TTTGGAGAGAGTTCCTGAGAACGTGGACGCTGCCAAGGAACTGCTGCAGTATGGCTTGAAAGGCACAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp AGCAGATCGCGTCTCTTCTTAAGCTCTTCCTGCCGTTaGCTCTTGGAAGGCTCTTTGTCTGCTGGGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SRSRLFLSSSCR*LLEGSLSAGES
Trigger: GCTTTCCCCAGCAGACAAAGAGCCTTCCAAGAGCAAACGGCAGGAAGAGCTTAAGAAGAGACGCGATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp GCATCCACCAGCAGGGAAAGCAGCTCCTGGTCACAATaGGAGTCATTCACCTTAGTGACGGCTGAGATTTGC +
Preference number: 6 (lower is better)
Translates to: ASTSRESSSWSQ*ESFTLVTAEIC
Trigger: GCAAATCTCAGCCGTCACTAAGGTGAATGACTCCAATTGTGACCAGGAGCTGCTTTCCCTGCTGGTGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp CACCTGGCCAAATCCATGCAGCTGTCAGTGAGGTTGGTGGAAGAGTaGAAGTACTCTCTGCTGGCAGCCAAAACCAAGTCGATGCTTCTC +
Preference number: 6 (lower is better)
Translates to: HLAKSMQLSVRLVEE*KYSLLAAKTKSMLL
Trigger: GAGAAGCATCGACTTGGTTTTGGCTGCCAGCAGAGAGTACTTCAACTCTTCCACCAACCTCACTGACAGCTGCATGGATTTGGCCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp CTCCTGCAGGTGTCTAGCCAGTTCCTCTATATTCCAGCGCCCTTGTaGGTTGTTGGCCACAAGGTGACCAACAATATGTGGGTAGAAGGG +
Preference number: 6 (lower is better)
Translates to: LLQVSSQFLYIPAPL*VVGHKVTNNMWVEG
Trigger: CCCTTCTACCCACATATTGTTGGTCACCTTGTGGCCAACAACCAACAAGGGCGCTGGAATATAGAGGAACTGGCTAGACACCTGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp CCATCACTGACAGCCTGCAGCACAGCCTTGGTAGTAGTTGTGGTATaGGACAAGACTTTCATGGTGGTTGCAGTGGTCCAGTGTAACAGG +
Preference number: 6 (lower is better)
Translates to: PSLTACSTALVVVVV*DKTFMVVAVVQCNR
Trigger: CCTGTTACACTGGACCACTGCAACCACCATGAAAGTCTTGTCCAATACCACAACTACTACCAAGGCTGTGCTGCAGGCTGTCAGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp ACATTTTCCTCAAGGCTTTCTGCCAGGCCCAGGATGGTTTCTCTTTaGTACTGGTCATCAGCAGTAAACCTCTGCACGTCCACGCCCTTC +
Preference number: 6 (lower is better)
Translates to: TFSSRLSARPRMVSL*YWSSAVNLCTSTPF
Trigger: GAAGGGCGTGGACGTGCAGAGGTTTACTGCTGATGACCAGTACAAAAGAGAAACCATCCTGGGCCTGGCAGAAAGCCTTGAGGAAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp CCCAAAATAGCGAGCCTTGGCAGAGGTCTCAGGATCTaGGTCAGAATCCACTTCCCCTTCATCTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: PKIASLGRGLRI*VRIHFPFIFFS
Trigger: GGAGAAGAAGATGAAGGGGAAGTGGATTCTGACTCAGATCCTGAGACCTCTGCCAAGGCTCGCTATTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TCACCCCAAATTCTTCAAGATACCCCAGGGCTTGAATaGGGTCTAATTCCTCCTGAATGGCAGCCGGCCTGT +
Preference number: 6 (lower is better)
Translates to: SPQILQDTPGLE*GLIPPEWQPAC
Trigger: ACAGGCCGGCTGCCATTCAGGAGGAATTAGACCTCATTCAAGCCCTGGGGTATCTTGAAGAATTTGGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp CTCTTCCTGCCGTTTGCTCTTGGAAGGCTCTTTGTCTaGTGGGGAAAGCTCCTCATAGGCAATGCTGTCAAT +
Preference number: 6 (lower is better)
Translates to: LFLPFALGRLFV*WGKLLIGNAVN
Trigger: ATTGACAGCATTGCCTATGAGGAGCTTTCCCCAGCAGACAAAGAGCCTTCCAAGAGCAAACGGCAGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp TCCAACTCCTCGCACCAGTCTTCAGCTCGGTGTTTATaGTCAGCCCAAGGGATGATTGTCAAGGAGTCATTG +
Preference number: 6 (lower is better)
Translates to: SNSSHQSSARCL*SAQGMIVKESL
Trigger: CAATGACTCCTTGACAATCATCCCTTGGGCTGAGCATAAACACCGAGCTGAAGACTGGTGCGAGGAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp AGAGGGAGAGCTGGTCACTTCGTTCACAGTTATAGATaGATTCGAGCGCTATGGCCATCAGCTGGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: RGRAGHFVHSYR*IRALWPSAGPH
Trigger: ATGAGGACCAGCTGATGGCCATAGCGCTCGAATGCATCTATAACTGTGAACGAAGTGACCAGCTCTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp TGGTTGCAGTGGTCCAGTGTAACAGGTCAGCTGAACTaGTGCCCAAAGCAGCAGCATCCTCTTGTAGAACTT +
Preference number: 6 (lower is better)
Translates to: WLQWSSVTGQLN*CPKQQHPLVEL
Trigger: AAGTTCTACAAGAGGATGCTGCTGCTTTGGGCAGCAGTTCAGCTGACCTGTTACACTGGACCACTGCAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp GCTTTTGTGATGATGAATGATGCACCGTGCTTTCGGTaGCCTCTGAGCTGCACTTCTGTCTCAGGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: AFVMMNDAPCFR*PLSCTSVSGGH
Trigger: ATGGCCACCTGAGACAGAAGTGCAGCTCAGAGGCAACCGAAAGCACGGTGCATCATTCATCATCACAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp TCAAGGCTTTCTGCCAGGCCCAGGATGGTTTCTCTTTaGTACTGGTCATCAGCAGTAAACCTCTGCACGTCC +
Preference number: 6 (lower is better)
Translates to: SRLSARPRMVSL*YWSSAVNLCTS
Trigger: GGACGTGCAGAGGTTTACTGCTGATGACCAGTACAAAAGAGAAACCATCCTGGGCCTGGCAGAAAGCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp CTGGTCAGCATCGCAGTCACTAGTCTCACCCACGGATaGTTGGCTAGGACACATTCACTTTTCATAGGTGGC +
Preference number: 6 (lower is better)
Translates to: LVSIAVTSLTHG*LARTHSLFIGG
Trigger: GCCACCTATGAAAAGTGAATGTGTCCTAGCCAACAATCCGTGGGTGAGACTAGTGACTGCGATGCTGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp GAGCCTGAAAGGACTCTCCATGCAGAAAGGCCACAGCTAGCAGCTTaGGAAATGCCCAGTTCAGCAGTTTCACATCCACCAACCAGTAAA +
Preference number: 6 (lower is better)
Translates to: EPERTLHAERPQLAA*EMPSSAVSHPPTSK
Trigger: TTTACTGGTTGGTGGATGTGAAACTGCTGAACTGGGCATTTCCAAAGCTGCTAGCTGTGGCCTTTCTGCATGGAGAGTCCTTTCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp GACTTTTTCCACCACTGCCCATCACTGACAGCCTGCAGCACAGCCTaGGTAGTAGTTGTGGTATTGGACAAGACTTTCATGGTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: DFFHHCPSLTACSTA*VVVVVLDKTFMVVA
Trigger: TGCAACCACCATGAAAGTCTTGTCCAATACCACAACTACTACCAAGGCTGTGCTGCAGGCTGTCAGTGATGGGCAGTGGTGGAAAAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TCCCATCCTGTTCTTGTCCCAGGCGAGGGGAAAGCTTaGCACTTAGCAGCTTTAATAATCCCAGGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: SHPVLVPGEGKA*HLAALIIPGSL
Trigger: CAAAGACCCTGGGATTATTAAAGCTGCTAAGTGTCAAGCTTTCCCCTCGCCTGGGACAAGAACAGGATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp TTTGAAGAGAGCTGCTGGCTTCCAAGAGAAGTTCAATaGTGCTGGGAGGGCAATGTGTCAAAGCGAAAGCCA +
Preference number: 6 (lower is better)
Translates to: FEESCWLPREVQ*CWEGNVSKRKP
Trigger: TGGCTTTCGCTTTGACACATTGCCCTCCCAGCAGCATTGAACTTCTCTTGGAAGCCAGCAGCTCTCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp CGAACCATCAGGCTGCGAGCCTCTTCGGAGCTAGATTaGGTGTTCTTCACAAATGAAACTGGTTTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: RTIRLRASSELD*VFFTNETGFSS
Trigger: ACTGGAGAAACCAGTTTCATTTGTGAAGAACACCCAATCTAGCTCCGAAGAGGCTCGCAGCCTGATGGTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp TTGTGGTATTGGACAAGACTTTCATGGTGGTTGCAGTaGTCCAGTGTAACAGGTCAGCTGAACTGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LWYWTRLSWWLQ*SSVTGQLNCCP
Trigger: TGGGCAGCAGTTCAGCTGACCTGTTACACTGGACCACTGCAACCACCATGAAAGTCTTGTCCAATACCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp AAATCCATGCAGCTGTCAGTGAGGTTGGTGGAAGAGTaGAAGTACTCTCTGCTGGCAGCCAAAACCAAGTCG +
Preference number: 6 (lower is better)
Translates to: KSMQLSVRLVEE*KYSLLAAKTKS
Trigger: CGACTTGGTTTTGGCTGCCAGCAGAGAGTACTTCAACTCTTCCACCAACCTCACTGACAGCTGCATGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp GTGTCTAGCCAGTTCCTCTATATTCCAGCGCCCTTGTaGGTTGTTGGCCACAAGGTGACCAACAATATGTGG +
Preference number: 6 (lower is better)
Translates to: VSSQFLYIPAPL*VVGHKVTNNMW
Trigger: CCACATATTGTTGGTCACCTTGTGGCCAACAACCAACAAGGGCGCTGGAATATAGAGGAACTGGCTAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp ATCTTGAAGATCCCATCCTGTTCTTGTCCCAGGCGAGGGGAAAGCTaGACACTTAGCAGCTTTAATAATCCCAGGGTCTTTGGCACCTCA +
Preference number: 6 (lower is better)
Translates to: ILKIPSCSCPRRGES*TLSSFNNPRVFGTS
Trigger: TGAGGTGCCAAAGACCCTGGGATTATTAAAGCTGCTAAGTGTCAAGCTTTCCCCTCGCCTGGGACAAGAACAGGATGGGATCTTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp AGTCTTCAGCTCGGTGTTTATGCTCAGCCCAAGGGATaGTTGTCAAGGAGTCATTGTTCCAACAAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: SLQLGVYAQPKG*LSRSHCSNKPL
Trigger: CAGAGGCTTGTTGGAACAATGACTCCTTGACAATCATCCCTTGGGCTGAGCATAAACACCGAGCTGAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TGCAAGAGAACTTCCGTGGTTGGAAACACTTGTGTCTaGGCCTCTGTCAGCTTTCCAGTTCTCAGCAACACT +
Preference number: 6 (lower is better)
Translates to: CKRTSVVGNTCV*ASVSFPVLSNT
Trigger: AGTGTTGCTGAGAACTGGAAAGCTGACAGAGGCTCAGACACAAGTGTTTCCAACCACGGAAGTTCTCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp AAGAGCGATGCTGTAGACATTTTCCTCAAGGCTTTCTaGCAGGCCCAGGATGGTTTCTCTTTTGTACTGGTC +
Preference number: 6 (lower is better)
Translates to: KSDAVDIFLKAF*QAQDGFSFVLV
Trigger: GACCAGTACAAAAGAGAAACCATCCTGGGCCTGGCAGAAAGCCTTGAGGAAAATGTCTACAGCATCGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp GTCTTCACTGTCAATCTTTCTCTGATAAAGCTCCTCTaGAGTTGTGGAGCGCAGACTCACAAGGCGGTAGTT +
Preference number: 6 (lower is better)
Translates to: VFTVNLSLIKLL*SCGAQTHKAVV
Trigger: AACTACCGCCTTGTGAGTCTGCGCTCCACAACTCCAGAGGAGCTTTATCAGAGAAAGATTGACAGTGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp GCGTCCACGTTCTCAGGAACTCTCTCCAAACACTCATaGAGAACCCAAGACCGCTTCTTGATTTTACTCAAG +
Preference number: 6 (lower is better)
Translates to: ASTFSGTLSKHS*RTQDRFLILLK
Trigger: CTTGAGTAAAATCAAGAAGCGGTCTTGGGTTCTCCATGAGTGTTTGGAGAGAGTTCCTGAGAACGTGGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp AGCGGTGGAGAAAGGGAACCATCCACTGGTAAGCACTaGTCACATAATTGTCCTCAGAACAATGCTCCATCA +
Preference number: 6 (lower is better)
Translates to: SGGEREPSTGKH*SHNCPQNNAPS
Trigger: TGATGGAGCATTGTTCTGAGGACAATTATGTGACCAGTGCTTACCAGTGGATGGTTCCCTTTCTCCACCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp GCAAAGCATCACTTGCTAGTTGCAAGAGAACTTCCGTaGTTGGAAACACTTGTGTCTGAGCCTCTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: AKHHLLVARELP*LETLVSEPLSA
Trigger: AGCTGACAGAGGCTCAGACACAAGTGTTTCCAACCACGGAAGTTCTCTTGCAACTAGCAAGTGATGCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp TTGTTGGTTGTTGGCCACAAGGTGACCAACAATATGTaGGTAGAAGGGTGTGGAGACACATTTCACCAGCAG +
Preference number: 6 (lower is better)
Translates to: LLVVGHKVTNNM*VEGCGDTFHQQ
Trigger: CTGCTGGTGAAATGTGTCTCCACACCCTTCTACCCACATATTGTTGGTCACCTTGTGGCCAACAACCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp CACTGTCAATCTTTCTCTGATAAAGCTCCTCTGGAGTaGTGGAGCGCAGACTCACAAGGCGGTAGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: HCQSFSDKAPLE*WSADSQGGSSL
Trigger: CAAAGAACTACCGCCTTGTGAGTCTGCGCTCCACAACTCCAGAGGAGCTTTATCAGAGAAAGATTGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp GCTCGGTGTTTATGCTCAGCCCAAGGGATGATTGTCAAGGAGTCATaGTTCCAACAAGCCTCTGGCAACAAAACAGCATATTCGTGTGGA +
Preference number: 6 (lower is better)
Translates to: ARCLCSAQGMIVKES*FQQASGNKTAYSCG
Trigger: TCCACACGAATATGCTGTTTTGTTGCCAGAGGCTTGTTGGAACAATGACTCCTTGACAATCATCCCTTGGGCTGAGCATAAACACCGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp CATTCGGCAAAGCATCACTTGCTAGTTGCAAGAGAACTTCCGTGGTaGGAAACACTTGTGTCTGAGCCTCTGTCAGCTTTCCAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: HSAKHHLLVARELPW*ETLVSEPLSAFQFS
Trigger: TGAGAACTGGAAAGCTGACAGAGGCTCAGACACAAGTGTTTCCAACCACGGAAGTTCTCTTGCAACTAGCAAGTGATGCTTTGCCGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp AGCTTGCCATTGTTTGCGAGTACCAAATGCCAGTTTATCTGTTTATaGACCAAGCGAACCAGTCCATCAGGAAGCAAAAACGGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: SLPLFASTKCQFICL*TKRTSPSGSKNGAG
Trigger: CCCTGCTCCGTTTTTGCTTCCTGATGGACTGGTTCGCTTGGTCAATAAACAGATAAACTGGCATTTGGTACTCGCAAACAATGGCAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp TCTCTGATTGCTTTTGTGATGATGAATGATGCACCGTaGTTTCGGTTGCCTCTGAGCTGCACTTCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: SLIAFVMMNDAP*FRLPLSCTSVS
Trigger: TGAGACAGAAGTGCAGCTCAGAGGCAACCGAAAGCACGGTGCATCATTCATCATCACAAAAGCAATCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp GTAAAATCATCTTTTGCAGACCTGATCTCCACACACTaGTCCTGGACAGCAGCCAGAAGCTTGCCATTGTTT +
Preference number: 6 (lower is better)
Translates to: VKSSFADLISTH*SWTAARSLPLF
Trigger: AAACAATGGCAAGCTTCTGGCTGCTGTCCAGGACCAGTGTGTGGAGATCAGGTCTGCAAAAGATGATTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp CACTGGCTTTGTATTCTAAAAATACCAACCCAGCAATaGCGTAGCTTAAGTCCCCAGCAAAGACAGATGCCG +
Preference number: 6 (lower is better)
Translates to: HWLCILKIPTQQ*RSLSPQQRQMP
Trigger: CGGCATCTGTCTTTGCTGGGGACTTAAGCTACGCCATTGCTGGGTTGGTATTTTTAGAATACAAAGCCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp ACACACTGGTCCTGGACAGCAGCCAGAAGCTTGCCATaGTTTGCGAGTACCAAATGCCAGTTTATCTGTTTA +
Preference number: 6 (lower is better)
Translates to: THWSWTAARSLP*FASTKCQFICL
Trigger: TAAACAGATAAACTGGCATTTGGTACTCGCAAACAATGGCAAGCTTCTGGCTGCTGTCCAGGACCAGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp GTTGGTCTACCATGTCATGAAGAGATGAGGTTACCTTaGTATTATGCCCACACCCCCTTTGTGGGAGGCATT +
Preference number: 6 (lower is better)
Translates to: VGLPCHEEMRLP*YYAHTPFVGGI
Trigger: AATGCCTCCCACAAAGGGGGTGTGGGCATAATACAAAGGTAACCTCATCTCTTCATGACATGGTAGACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp AAGCATCACTTGCTAGTTGCAAGAGAACTTCCGTGGTaGGAAACACTTGTGTCTGAGCCTCTGTCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: KHHLLVARELPW*ETLVSEPLSAF
Trigger: GAAAGCTGACAGAGGCTCAGACACAAGTGTTTCCAACCACGGAAGTTCTCTTGCAACTAGCAAGTGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp TTTTCTCCAGTTGGTCTACCATGTCATGAAGAGATGAGGTTACCTTaGTATTATGCCCACACCCCCTTTGTGGGAGGCATTCTAGGATGT +
Preference number: 6 (lower is better)
Translates to: FSPVGLPCHEEMRLP*YYAHTPFVGGILGC
Trigger: ACATCCTAGAATGCCTCCCACAAAGGGGGTGTGGGCATAATACAAAGGTAACCTCATCTCTTCATGACATGGTAGACCAACTGGAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp GGAGATAAGCAAGAGCCAATGTCATGTCATTCGGCAAAGCATCACTaGCTAGTTGCAAGAGAACTTCCGTGGTTGGAAACACTTGTGTCT +
Preference number: 6 (lower is better)
Translates to: GDKQEPMSCHSAKHH*LVARELPWLETLVS
Trigger: AGACACAAGTGTTTCCAACCACGGAAGTTCTCTTGCAACTAGCAAGTGATGCTTTGCCGAATGACATGACATTGGCTCTTGCTTATCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp AAGGACTCAGGATCTGTCTTCAAAGTGTCAAAGAGGTaGAGGGTTTGGGCTCGCTTTTCAATTTCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: KDSGSVFKVSKR*RVWARFSISPV
Trigger: CACAGGAGAAATTGAAAAGCGAGCCCAAACCCTTCACCTCTTTGACACTTTGAAGACAGATCCTGAGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp CAAGAGCCAATGTCATGTCATTCGGCAAAGCATCACTaGCTAGTTGCAAGAGAACTTCCGTGGTTGGAAACA +
Preference number: 6 (lower is better)
Translates to: QEPMSCHSAKHH*LVARELPWLET
Trigger: TGTTTCCAACCACGGAAGTTCTCTTGCAACTAGCAAGTGATGCTTTGCCGAATGACATGACATTGGCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp AAGTCTCCTTTAGCTAAAGTTACTAGATATTCTCTTAGTAGCTCATaGGCTGCACCTGGAGACTGTTTCTCACAGCGGTGGAGAAAGGGA +
Preference number: 6 (lower is better)
Translates to: KSPLAKVTRYSLSSS*AAPGDCFSQRWRKG
Trigger: TCCCTTTCTCCACCGCTGTGAGAAACAGTCTCCAGGTGCAGCCAATGAGCTACTAAGAGAATATCTAGTAACTTTAGCTAAAGGAGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp TTAATGGCCTTTCTGGTCATCTCTTCGCGTGCTTCTACTGACAGCTaGGACACAGCTTTTGGAGAAAATGTAATTGCATCCATCACAGTG +
Preference number: 6 (lower is better)
Translates to: LMAFLVISSRASTDS*DTAFGENVIASITV
Trigger: CACTGTGATGGATGCAATTACATTTTCTCCAAAAGCTGTGTCCAAGCTGTCAGTAGAAGCACGCGAAGAGATGACCAGAAAGGCCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TTTCAAAGTTGGCACAACCACAGCTTTCCAGGAGAGTaGAATAATACAGCAGCCTTTCATGGTCAAGACCCT +
Preference number: 6 (lower is better)
Translates to: FQSWHNHSFPGE*NNTAAFHGQDP
Trigger: AGGGTCTTGACCATGAAAGGCTGCTGTATTATTTCACTCTCCTGGAAAGCTGTGGTTGTGCCAACTTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp AATGTCATGTCATTCGGCAAAGCATCACTTGCTAGTTaGAAGAGAACTTCCGTGGTTGGAAACACTTGTGTC +
Preference number: 6 (lower is better)
Translates to: NVMSFGKASLAS*KRTSVVGNTCV
Trigger: GACACAAGTGTTTCCAACCACGGAAGTTCTCTTGCAACTAGCAAGTGATGCTTTGCCGAATGACATGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp GCTGAATCATCCTTAGAGGTTGGCCATCTAAACACATaGCCACAGCTTGGTCATGAATTTTCTCCTTTTCTG +
Preference number: 6 (lower is better)
Translates to: AESSLEVGHLNT*PQLGHEFSPFL
Trigger: CAGAAAAGGAGAAAATTCATGACCAAGCTGTGGCCATGTGTTTAGATGGCCAACCTCTAAGGATGATTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp TTATGCTCAGCCCAAGGGATGATTGTCAAGGAGTCATaGTTCCAACAAGCCTCTGGCAACAAAACAGCATAT +
Preference number: 6 (lower is better)
Translates to: LCSAQGMIVKES*FQQASGNKTAY
Trigger: ATATGCTGTTTTGTTGCCAGAGGCTTGTTGGAACAATGACTCCTTGACAATCATCCCTTGGGCTGAGCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp TGTTTGCGAGTACCAAATGCCAGTTTATCTGTTTATTaGCCAAGCGAACCAGTCCATCAGGAAGCAAAAACG +
Preference number: 6 (lower is better)
Translates to: CLRVPNASLSVY*PSEPVHQEAKT
Trigger: CGTTTTTGCTTCCTGATGGACTGGTTCGCTTGGTCAATAAACAGATAAACTGGCATTTGGTACTCGCAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp AATTTTCTCCAGTTGGTCTACCATGTCATGAAGAGATaGGGTTACCTTTGTATTATGCCCACACCCCCTTTG +
Preference number: 6 (lower is better)
Translates to: NFLQLVYHVMKR*GYLCIMPTPPL
Trigger: CAAAGGGGGTGTGGGCATAATACAAAGGTAACCTCATCTCTTCATGACATGGTAGACCAACTGGAGAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp AGATCAGCACTGCCACCACTCAATGCAGAAATTATTTaGGTGATTGCAGTATGCACTATATCCTTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: RSALPPLNAEII*VIAVCTISLGE
Trigger: CTCTCCCAAGGATATAGTGCATACTGCAATCACTCAAATAATTTCTGCATTGAGTGGTGGCAGTGCTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp CGGATAATGACCACTAAAGCTGAAACTGTGACTCTCTaGGTAGCTCTGATTTGTTCCAACACTGACAAGGTA +
Preference number: 6 (lower is better)
Translates to: RIMTTKAETVTL*VALICSNTDKV
Trigger: TACCTTGTCAGTGTTGGAACAAATCAGAGCTACCAAGAGAGTCACAGTTTCAGCTTTAGTGGTCATTATCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 72 bp GAGATCAGCACTGCCACCACTCAATGCAGAAATTATTaGAGTGATTGCAGTATGCACTATATCCTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: EISTATTQCRNY*SDCSMHYILGR
Trigger: TCTCCCAAGGATATAGTGCATACTGCAATCACTCAAATAATTTCTGCATTGAGTGGTGGCAGTGCTGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS TCA 72 bp ACACTGAGAATTTTCTCCAGTTGGTCTACCATGTCATaGAGAGATGAGGTTACCTTTGTATTATGCCCACAC +
Preference number: 6 (lower is better)
Translates to: TLRIFSSWSTMS*RDEVTFVLCPH
Trigger: GTGTGGGCATAATACAAAGGTAACCTCATCTCTTCATGACATGGTAGACCAACTGGAGAAAATTCTCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS GCA 72 bp ACTGCCACCACTCAATGCAGAAATTATTTGAGTGATTaGAGTATGCACTATATCCTTGGGAGAGATGTTGAC +
Preference number: 6 (lower is better)
Translates to: TATTQCRNYLSD*SMHYILGRDVD
Trigger: GTCAACATCTCTCCCAAGGATATAGTGCATACTGCAATCACTCAAATAATTTCTGCATTGAGTGGTGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CAA 90 bp TATTCCATGCGGATAATGACCACTAAAGCTGAAACTGTGACTCTCTaGGTAGCTCTGATTTGTTCCAACACTGACAAGGTAACTTCTAAG +
Preference number: 6 (lower is better)
Translates to: YSMRIMTTKAETVTL*VALICSNTDKVTSK
Trigger: CTTAGAAGTTACCTTGTCAGTGTTGGAACAAATCAGAGCTACCAAGAGAGTCACAGTTTCAGCTTTAGTGGTCATTATCCGCATGGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10
CDS CCA 72 bp AACTTTAAATTTCTTCAGCAGACGAATGTGGATTTCTaGTTTAATAGCAGTTGTTTCAAAGTTGGCACAACC +
Preference number: 6 (lower is better)
Translates to: NFKFLQQTNVDF*FNSSCFKVGTT
Trigger: GGTTGTGCCAACTTTGAAACAACTGCTATTAAACCAGAAATCCACATTCGTCTGCTGAAGAAATTTAAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042953.10