RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NAV3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020181

Ensembl transcript IDs: ENSMUST00000032719.15, ENSMUST00000238286.2, ENSMUST00000239301.2

Found 990 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATaGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAG +
Preference number: 1 (lower is better)
Translates to: TGALSPAPCGTKEVP*IRRILPEKGSLRPE
Trigger: CTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR GCA 90 bp CAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTaGCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGC +
Preference number: 1 (lower is better)
Translates to: QHHVAQRKFHGSEGS*LRRAASAPRKQKKG
Trigger: GCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CCA 90 bp GTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTaGGCCAGGGCCCTGGACAGGGGACTTTTCATACTGGCAGTGGTT +
Preference number: 1 (lower is better)
Translates to: VSSNLILLPPWTPQL*ARALDRGLFILAVV
Trigger: AACCACTGCCAGTATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR TCA 90 bp ACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTaGGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGA +
Preference number: 1 (lower is better)
Translates to: TMWHKGSSMDQKDPA*EGQPPPRGNKRKAR
Trigger: TCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR GCA 90 bp CAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTaGAGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCA +
Preference number: 1 (lower is better)
Translates to: QFLLCLWRTGLVGSF*SEGAHSPNSTGALS
Trigger: TGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR TCA 90 bp CAGGCAGTTACTCATCCAAAATTGTACCGGCCTCATGTACAGTTCTaGAGCATGCTCACTCTAGCACTGATGGCTCCTGCATTGTCACAA +
Preference number: 1 (lower is better)
Translates to: QAVTHPKLYRPHVQF*SMLTLALMAPALSQ
Trigger: TTGTGACAATGCAGGAGCCATCAGTGCTAGAGTGAGCATGCTTCAGAACTGTACATGAGGCCGGTACAATTTTGGATGAGTAACTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR TCA 90 bp TCTAACCTTCTTGTACAGTATAAGTACTTCCTCTTCCACAGTGACTaGCCAGATCAGCGCTCCTTAATGCAGAATGTCTCGTGTATGACG +
Preference number: 1 (lower is better)
Translates to: SNLLVQYKYFLFHSD*PDQRSLMQNVSCMT
Trigger: CGTCATACACGAGACATTCTGCATTAAGGAGCGCTGATCTGGTCAGTCACTGTGGAAGAGGAAGTACTTATACTGTACAAGAAGGTTAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR TCA 90 bp GAAAATGAGGCTGCTGTGTTAACTGGTGTGTTGCTTGGTTGTCAATaGAGAGACAGTGGAAATTACCAATGGTTTAGTGTTGAAACGAAC +
Preference number: 1 (lower is better)
Translates to: ENEAAVLTGVLLGCQ*RDSGNYQWFSVETN
Trigger: GTTCGTTTCAACACTAAACCATTGGTAATTTCCACTGTCTCTTCATTGACAACCAAGCAACACACCAGTTAACACAGCAGCCTCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR GCA 90 bp TTAGTTAAATTTATTTCCTTAAAAGCTTTGGAATCCTTCCTCAGGTaGTTATGGAATTTAGATGGACACAGATGCCTAATGATGGTGTGT +
Preference number: 1 (lower is better)
Translates to: LVKFISLKALESFLR*LWNLDGHRCLMMVC
Trigger: ACACACCATCATTAGGCATCTGTGTCCATCTAAATTCCATAAGCACCTGAGGAAGGATTCCAAAGCTTTTAAGGAAATAAATTTAACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR TCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGCAGAAGGATCCTGCCTaGGAAGGGCAGCCTCCGCCC +
Preference number: 2 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVQKDPA*EGQPPP
Trigger: GGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTG...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTGGACACCACAACTCTaGGCCAGGGCCCTGGACAGG +
Preference number: 2 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHWTPQL*ARALDR
Trigger: CCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCA...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR GCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACGGATCAGAAGGATCCTaGCTGAGAAGGGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHGSEGS*LRRAAS
Trigger: GGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCC...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAATGGACACCACAACTCTaGGCCAGGGCCCTGGACAGG +
Preference number: 2 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQWTPQL*ARALDR
Trigger: CCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCA...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACATTCTGCTACCTCCGTaGACACCACAACTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHILLPP*TPQLWA
Trigger: GGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAAT...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTGGACACCACAACTCTaGGCCAGGGCCCTGGACAGG +
Preference number: 2 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDWTPQL*ARALDR
Trigger: CCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR GCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACCTCGTGGGTTCATTCTaGAGTGAGGGAGCACACAGC +
Preference number: 2 (lower is better)
Translates to: SVFACSRQGASAGETPLNLVGSF*SEGAHS
Trigger: GCTGTGTGCTCCCTCACTGCAGAATGAACCCACGAG...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAGGAGGACTGGCCTCGTaGGTTCATTCTGCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: SRQGASAGETPLNTNRIKGGLAS*VHSAVR
Trigger: CCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCC...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR GCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCGGATCAGAAGGATCCTaGCTGAGAAGGGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGGSEGS*LRRAAS
Trigger: GGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCC...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGCAGAAGGATCCTGCCTaGGAAGGGCAGCCTCCGCCC +
Preference number: 2 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVQKDPA*EGQPPP
Trigger: GGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTG...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGGGGACTTTTCATACTaGCAGTGGTTTAGTGACAAT +
Preference number: 2 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVGDFSY*QWFSDN
Trigger: ATTGTCACTAAACCACTGCCAGTATGAAAAGTCCCC...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAGTCACCAGCACCATGTaGCACAAAGGAAGTTCCATG +
Preference number: 2 (lower is better)
Translates to: SRQGASAGETPLNTNRIKVTSTM*HKGSSM
Trigger: CATGGAACTTCCTTTGTGCCACATGGTGCTGGTGAC...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCGTGCTTATGGAGGACTaGCCTCGTGGGTTCATTCTG +
Preference number: 2 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGVLMED*PRGFIL
Trigger: CAGAATGAACCCACGAGGCCAGTCCTCCATAAGCAC...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CAA 90 bp GTTGGCCACAGGCGATTTTATTTTGCGGTGGGTGCACAATTCCTTTaGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: VGHRRFYFAVGAQFL*CLWRTGLVGSFCSE
Trigger: CTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGCACCCACCGCAAAATAAAATCGCCTGTGGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CAA 90 bp TTAGAAGGAAGCTGGTCCTTCCCGTTGGCCACAGGCGATTTTATTTaGCGGTGGGTGCACAATTCCTTTTGTGCTTATGGAGGACTGGCC +
Preference number: 2 (lower is better)
Translates to: LEGSWSFPLATGDFI*RWVHNSFCAYGGLA
Trigger: GGCCAGTCCTCCATAAGCACAAAAGGAATTGTGCACCCACCGCAAAATAAAATCGCCTGTGGCCAACGGGAAGGACCAGCTTCCTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACATCTGGGCCAGGGCCCTaGACAGGGGACTTTTCATAC +
Preference number: 2 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTSGPGP*TGDFSY
Trigger: GTATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGA...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR GCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACCTACCCAGTAGACTGTaGAAATCTAACCTTCTTGTA +
Preference number: 2 (lower is better)
Translates to: SVFACSRQGASAGETPLNLPSRL*KSNLLV
Trigger: TACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAG...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAACAAAGGAAGTTCCATaGATCAGAAGGATCCTGCCT +
Preference number: 2 (lower is better)
Translates to: SRQGASAGETPLNTNRIKTKEVP*IRRILP
Trigger: AGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGT...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGTCACCAGCACCATGTaGCACAAAGGAAGTTCCATG +
Preference number: 2 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSVTSTM*HKGSSM
Trigger: CATGGAACTTCCTTTGTGCCACATGGTGCTGGTGAC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATTTTCATACTGGCAGTaGTTTAGTGACAATACCTGT +
Preference number: 2 (lower is better)
Translates to: WIRRILPEKGSLRPEETKFSYWQ*FSDNTC
Trigger: ACAGGTATTGTCACTAAACCACTGCCAGTATGAAAA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTTTTCATACTGGCAGTaGTTTAGTGACAATACCTGT +
Preference number: 2 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGFSYWQ*FSDNTC
Trigger: ACAGGTATTGTCACTAAACCACTGCCAGTATGAAAA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGATTCTGCTACCTCCGTaGACACCACAACTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVILLPP*TPQLWA
Trigger: GGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAAT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACACAGTTAGAAGGAAGCTaGTCCTTCCCGTTGGCCACA +
Preference number: 2 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTQLEGS*SFPLAT
Trigger: TGTGGCCAACGGGAAGGACCAGCTTCCTTCTAACTG...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGCTCTTCCACAGTGACTaGCCAGATCAGCGCTCCTTA +
Preference number: 2 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVLFHSD*PDQRSL
Trigger: TAAGGAGCGCTGATCTGGTCAGTCACTGTGGAAGAG...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAAATTCTGCTACCTCCGTaGACACCACAACTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKILLPP*TPQLWA
Trigger: GGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAAT...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGGAGGACTGGCCTCGTaGGTTCATTCTGCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVGGLAS*VHSAVR
Trigger: CCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCATTGGTATAAAACTCTaGTTCAGGGAGTTGGCAGGT +
Preference number: 2 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGIGIKL*FRELAG
Trigger: ACCTGCCAACTCCCTGAACCAGAGTTTTATACCAAT...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR TCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCGGGTTCATTCTGCAGTaGGGGAGCACACAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: TYPVDCANLTFLYSISTSGFILQ*GSTQPK
Trigger: TTTGGGCTGTGTGCTCCCTCACTGCAGAATGAACCC...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR TCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCTTGCTTGGTTGTCAATaGAGAGACAGTGGAAATTAC +
Preference number: 2 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGLLGCQ*RDSGNY
Trigger: GTAATTTCCACTGTCTCTTCATTGACAACCAAGCAA...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGGTCACCAGCACCATGTaGCACAAAGGAAGTTCCATG +
Preference number: 2 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVVTSTM*HKGSSM
Trigger: CATGGAACTTCCTTTGTGCCACATGGTGCTGGTGAC...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGTTCCTTTTGTGCTTATaGAGGACTGGCCTCGTGGGT +
Preference number: 2 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVFLLCL*RTGLVG
Trigger: ACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CAA 90 bp ATCCAGCTACATAGATTGATGGTGCACAATAGGTTTGATCCACAGTaGAGGTTCCAAAGTCAGGGTGACAATTCTGTGTGCCTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: IQLHRLMVHNRFDPQ*RFQSQGDNSVCLSS
Trigger: TGAGCTGAGGCACACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTGCACCATCAATCTATGTAGCTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCTTTTCATACTGGCAGTaGTTTAGTGACAATACCTGT +
Preference number: 2 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGFSYWQ*FSDNTC
Trigger: ACAGGTATTGTCACTAAACCACTGCCAGTATGAAAA...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGTGCTTATGGAGGACTaGCCTCGTGGGTTCATTCTG +
Preference number: 2 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVVLMED*PRGFIL
Trigger: CAGAATGAACCCACGAGGCCAGTCCTCCATAAGCAC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGGGGAGGAAAGCCAAATaGTTTGTGCTCATGCCGAAT +
Preference number: 2 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVGRKAK*FVLMPN
Trigger: ATTCGGCATGAGCACAAACCATTTGGCTTTCCTCCC...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGAGTTGGCAGGTGGTTTaGAAAGACCACTGTGGTAAA +
Preference number: 2 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVSWQVV*KDHCGK
Trigger: TTTACCACAGTGGTCTTTTCAAACCACCTGCCAACT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CAA 90 bp AACAACTTGTTAAGTACAGGACAAACACACCAGATAATAACAGCTTaGAGGGTTTGCATTCTGTATTCGCTTGCAGCAGACAGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: NNLLSTGQTHQIITA*RVCILYSLAADREP
Trigger: AGGCTCCCTGTCTGCTGCAAGCGAATACAGAATGCAAACCCTCAAAGCTGTTATTATCTGGTGTGTTTGTCCTGTACTTAACAAGTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CAA 90 bp ACATATCATACAAGGGCGACTAGTCCACTCATCCAGCTACATAGATaGATGGTGCACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGT +
Preference number: 2 (lower is better)
Translates to: TYHTRATSPLIQLHR*MVHNRFDPQLRFQS
Trigger: ACTTTGGAACCTCAACTGTGGATCAAACCTATTGTGCACCATCAATCTATGTAGCTGGATGAGTGGACTAGTCGCCCTTGTATGATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAAACAAAGGAAGTTCCATaGATCAGAAGGATCCTGCCT +
Preference number: 2 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKTKEVP*IRRILP
Trigger: AGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGT...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGGCTGCTGTGTTAACTaGTGTGTTGCTTGGTTGTCA +
Preference number: 2 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYGCCVN*CVAWLS
Trigger: TGACAACCAAGCAACACACCAGTTAACACAGCAGCC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACATTGGTATAAAACTCTaGTTCAGGGAGTTGGCAGGT +
Preference number: 2 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYIGIKL*FRELAG
Trigger: ACCTGCCAACTCCCTGAACCAGAGTTTTATACCAAT...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CAA 90 bp TTGGTTGTCAATGAAGAGACAGTGGAAATTACCAATGGTTTAGTGTaGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCA +
Preference number: 2 (lower is better)
Translates to: LVVNEETVEITNGLV*KRTVETVGEVWFKA
Trigger: TGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAAACCATTGGTAATTTCCACTGTCTCTTCATTGACAACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CAA 90 bp ATTATTTACAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTaGTACAGTATAAGTACTTCCTCTTCCACAGTGACTGACCAGATC +
Preference number: 2 (lower is better)
Translates to: IIYNTYPVDCANLTF*YSISTSSSTVTDQI
Trigger: GATCTGGTCAGTCACTGTGGAAGAGGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTGTAAATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR TCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACATGATATACAGAAAATaGGGCTGCTGTGTTAACTGG +
Preference number: 2 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYMIYRK*GCCVNW
Trigger: CCAGTTAACACAGCAGCCTCATTTTCTGTATATCAT...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR GCA 72 bp GTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTaGCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAA +
Preference number: 3 (lower is better)
Translates to: VAQRKFHGSEGS*LRRAASAPRKQ
Trigger: TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CCA 72 bp CATCTTGTCAGTTCCAACCTAATTCTGCTACCTCCGTaGACACCACAACTCTGGGCCAGGGCCCTGGACAGG +
Preference number: 3 (lower is better)
Translates to: HLVSSNLILLPP*TPQLWARALDR
Trigger: CCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR GCA 72 bp TTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTaGAGTGAGGGAGCACACAGCCCAAACTCTACTGGG +
Preference number: 3 (lower is better)
Translates to: LCLWRTGLVGSF*SEGAHSPNSTG
Trigger: CCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CCA 72 bp AACCTAATTCTGCTACCTCCGTGGACACCACAACTCTaGGCCAGGGCCCTGGACAGGGGACTTTTCATACTG +
Preference number: 3 (lower is better)
Translates to: NLILLPPWTPQL*ARALDRGLFIL
Trigger: CAGTATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CCA 72 bp CCTGTCCTCTGTGGCTGGTGTACGTCTGCCAGTGACTaGTTAGTTCTCAGGCACTGTCTTAATAGCCCGCCA +
Preference number: 3 (lower is better)
Translates to: PVLCGWCTSASD*LVLRHCLNSPP
Trigger: TGGCGGGCTATTAAGACAGTGCCTGAGAACTAACCAGTCACTGGCAGACGTACACCAGCCACAGAGGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR TCA 72 bp CACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTaGGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGA +
Preference number: 3 (lower is better)
Translates to: HKGSSMDQKDPA*EGQPPPRGNKR
Trigger: TCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CCA 72 bp CCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTaGCACAAAGGAAGTTCCATGGATCAGAAGGATCCT +
Preference number: 3 (lower is better)
Translates to: PKLYWGPVTSTM*HKGSSMDQKDP
Trigger: AGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR-3UTR CAA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAATTAGGTTTCATAAACTaGGAACCTGTCCTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKLGFIN*EPVLCG
Trigger: GCCACAGAGGACAGGTTCCAAGTTTATGAAACCTAA...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CAA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAATGGTTTAGTGTaGAAACGAACTGTTGAAACT +
Preference number: 3 (lower is better)
Translates to: SVFACSRQGASAGETPLNTNGLV*KRTVET
Trigger: AGTTTCAACAGTTCGTTTCAACACTAAACCATTGGT...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR TCA 72 bp ACTCATCCAAAATTGTACCGGCCTCATGTACAGTTCTaGAGCATGCTCACTCTAGCACTGATGGCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: THPKLYRPHVQF*SMLTLALMAPA
Trigger: TGCAGGAGCCATCAGTGCTAGAGTGAGCATGCTTCAGAACTGTACATGAGGCCGGTACAATTTTGGATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CAA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAGGTGCACAATTCCTTTaGTGCTTATGGAGGACTGGC +
Preference number: 3 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTGAQFL*CLWRTG
Trigger: GCCAGTCCTCCATAAGCACAAAAGGAATTGTGCACC...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR GCA 72 bp GGACAAACACACCAGATAATAACAGCTTTGAGGGTTTaGATTCTGTATTCGCTTGCAGCAGACAGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: GQTHQIITALRV*ILYSLAADREP
Trigger: AGGCTCCCTGTCTGCTGCAAGCGAATACAGAATGCAAACCCTCAAAGCTGTTATTATCTGGTGTGTTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR TCA 72 bp CTTGTACAGTATAAGTACTTCCTCTTCCACAGTGACTaGCCAGATCAGCGCTCCTTAATGCAGAATGTCTCG +
Preference number: 3 (lower is better)
Translates to: LVQYKYFLFHSD*PDQRSLMQNVS
Trigger: CGAGACATTCTGCATTAAGGAGCGCTGATCTGGTCAGTCACTGTGGAAGAGGAAGTACTTATACTGTACAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CAA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAATGGTGTGTTGCTTGGTaGTCAATGAAGAGACAGTGG +
Preference number: 3 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKWCVAW*SMKRQW
Trigger: CCACTGTCTCTTCATTGACAACCAAGCAACACACCA...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR GCA 72 bp ACTGGATCCAGATTAGGAATCTCCCACCTTCAGAAATaGTCTCATTTTAGAACTAGGCAGAATGCAGCCACA +
Preference number: 3 (lower is better)
Translates to: TGSRLGISHLQK*SHFRTRQNAAT
Trigger: TGTGGCTGCATTCTGCCTAGTTCTAAAATGAGAGCATTTCTGAAGGTGGGAGATTCCTAATCTGGATCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGGTGCACAATTCCTTTaGTGCTTATGGAGGACTGGC +
Preference number: 3 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYGAQFL*CLWRTG
Trigger: GCCAGTCCTCCATAAGCACAAAAGGAATTGTGCACC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR TCA 72 bp GCTGCTGTGTTAACTGGTGTGTTGCTTGGTTGTCAATaGAGAGACAGTGGAAATTACCAATGGTTTAGTGTT +
Preference number: 3 (lower is better)
Translates to: AAVLTGVLLGCQ*RDSGNYQWFSV
Trigger: AACACTAAACCATTGGTAATTTCCACTGTCTCTTCATTGACAACCAAGCAACACACCAGTTAACACAGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CCA 72 bp GTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTaGTTTAAGGCAGTGAGACAGCACCATAGAAAATGT +
Preference number: 3 (lower is better)
Translates to: VLKRTVETVGEV*FKAVRQHHRKC
Trigger: ACATTTTCTATGGTGCTGTCTCACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CCA 72 bp TCTTTGAAAGATAAACATGAGGGGAGGAAAGCCAAATaGTTTGTGCTCATGCCGAATCCAGTACTTGTAGTT +
Preference number: 3 (lower is better)
Translates to: SLKDKHEGRKAK*FVLMPNPVLVV
Trigger: AACTACAAGTACTGGATTCGGCATGAGCACAAACCATTTGGCTTTCCTCCCCTCATGTTTATCTTTCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CCA 72 bp TCCTTAAAAGCTTTGGAATCCTTCCTCAGGTGCTTATaGAATTTAGATGGACACAGATGCCTAATGATGGTG +
Preference number: 3 (lower is better)
Translates to: SLKALESFLRCL*NLDGHRCLMMV
Trigger: CACCATCATTAGGCATCTGTGTCCATCTAAATTCCATAAGCACCTGAGGAAGGATTCCAAAGCTTTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CCA 72 bp TCTCTGCTTTTAAGTGATGGCCAAGGAAGGGTTCTATaGTTCTCGAATTATTTGCAGGATAGGCAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: SLLLSDGQGRVL*FSNYLQDRQRN
Trigger: ATTTCTTTGCCTATCCTGCAAATAATTCGAGAACCATAGAACCCTTCCTTGGCCATCACTTAAAAGCAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CCA 72 bp TTTGGAATCCTTCCTCAGGTGCTTATGGAATTTAGATaGACACAGATGCCTAATGATGGTGTGTTAATAGTG +
Preference number: 3 (lower is better)
Translates to: FGILPQVLMEFR*TQMPNDGVLIV
Trigger: CACTATTAACACACCATCATTAGGCATCTGTGTCCATCTAAATTCCATAAGCACCTGAGGAAGGATTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACACCAATGGTTTAGTGTaGAAACGAACTGTTGAAACT +
Preference number: 3 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYTNGLV*KRTVET
Trigger: AGTTTCAACAGTTCGTTTCAACACTAAACCATTGGT...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR GCA 72 bp ATGGCCAAGGAAGGGTTCTATGGTTCTCGAATTATTTaGAGGATAGGCAAAGAAATCTCTATTCATATGATA +
Preference number: 3 (lower is better)
Translates to: MAKEGFYGSRII*RIGKEISIHMI
Trigger: TATCATATGAATAGAGATTTCTTTGCCTATCCTGCAAATAATTCGAGAACCATAGAACCCTTCCTTGGCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR TCA 72 bp GATGGTGTGTTAATAGTGAAGAAACATTGTATAGCTTaGCATGTCCCTGCACATAGTTATTCAAAATTTCCC +
Preference number: 3 (lower is better)
Translates to: DGVLIVKKHCIA*HVPAHSYSKFP
Trigger: GGGAAATTTTGAATAACTATGTGCAGGGACATGTCAAGCTATACAATGTTTCTTCACTATTAACACACCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTGCTGCGCCAGGGCTTaGTGGCACTCGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTCCARA*WHSGKG
Trigger: TCCCTTCCCCGAGTGCCAGCAAGCCCTGGCGCAGCA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATACGGGGAAGGGATGGCTaGGGCTGGGGGTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIRGRDG*GWGLPR
Trigger: TCTGGGCAACCCCCAGCCTCAGCCATCCCTTCCCCG...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGGCTGTCTGAGCCCTTaGGTCCCACAGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTGCLSP*VPQALA
Trigger: TGCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTCTCCAGGAGCCTGTCTaGGACACAGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTLQEPV*DTDRLA
Trigger: AGCCAGCCTGTCTGTGTCTCAGACAGGCTCCTGGAG...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGGTGGTGGCCCCAGCTaGCTTGCTGCTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTGGGPS*LAADIG
Trigger: TCCAATGTCAGCAGCAAGTCAGCTGGGGCCACCACC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAGGGCTGAGCACTACTaGGGAGGACTTCGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHRAEHY*GGLRPL
Trigger: GAGGGGGCGAAGTCCTCCTCAGTAGTGCTCAGCCCT...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCCTGAGCCTTGTTGCTaGTGCTCGCAGCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHPEPCC*CSQLAP
Trigger: GGGTGCCAGCTGCGAGCAGCAGCAACAAGGCTCAGG...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTCTGGTGCTCGACCTGTaGCCACCTCTCCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTLVLDL*PPLPGI
Trigger: AATCCCTGGGAGAGGTGGCCACAGGTCGAGCACCAG...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACGGGAGCCATGATGGCTaGGGGGCAGGTCAATGGACT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHGSHDG*GAGQWT
Trigger: AGTCCATTGACCTGCCCCTCAGCCATCATGGCTCCC...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGTGCGGAGGCAGATTTaGCGCCTGCCTTGGCACCGA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIVRRQI*RLPWHR
Trigger: TCGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCAC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATCAGCCCACCAGCACTaGCCATGCTTCCCGTACCGG +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVASAHQH*PCFPYR
Trigger: CCGGTACGGGAAGCATGGGCAGTGCTGGTGGGCTGA...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTGCGCCAGGGCTTGCTaGCACTCGGGGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCCARAC*HSGKGW
Trigger: CCATCCCTTCCCCGAGTGCCAGCAAGCCCTGGCGCA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCTGGTGCTCGACCTGTaGCCACCTCTCCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHLVLDL*PPLPGI
Trigger: AATCCCTGGGAGAGGTGGCCACAGGTCGAGCACCAG...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATACCTGCAGCCCGCCAGTaGAATGCGATCGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIPAARQ*NAIAAT
Trigger: AGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGG...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATACTCCAGGAGCCTGTCTaGGACACAGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFILQEPV*DTDRLA
Trigger: AGCCAGCCTGTCTGTGTCTCAGACAGGCTCCTGGAG...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCCGGATGTGAAAGAGTaGACCGACGCTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHPDVKE*TDAGLE
Trigger: TTCCAGCCCAGCGTCGGTTCACTCTTTCACATCCGG...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACGAGGGCTTCATGGATaGAGAGCCACTCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVARGLHG*RATLAS
Trigger: GCTGGCGAGAGTGGCTCTTCATCCATGAAGCCCTCG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTAGAAGAGGCTGTGCTTaGGGAATCAGAAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTRRGCA*GIRRGP
Trigger: AGGCCCCCTTCTGATTCCTCAAGCACAGCCTCTTCT...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACGCTGAGGCTGGGGGTTaGCCAGAAGTGCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNAEAGG*PEVLGG
Trigger: GCCTCCCAGCACTTCTGGGCAACCCCCAGCCTCAGC...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGGGTTTTGGCCTGGCTaGCTTCGGACTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKGFWPG*LRTEGR
Trigger: CCGCCCCTCAGTCCGAAGCCAGCCAGGCCAAAACCC...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAGCTGCTGCTCGCAGCTaGCACCCTAGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKAAARS*HPRGPW
Trigger: CCAGGGCCCTCTAGGGTGCCAGCTGCGAGCAGCAGC...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGTCGGCTTGTCAGGTTaGGGATGGCCCTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTVGLSG*GWPFHS
Trigger: TGAATGGAAGGGCCATCCCCAACCTGACAAGCCGAC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTGGTGCTCGACCTGTaGCCACCTCTCCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVALVLDL*PPLPGI
Trigger: AATCCCTGGGAGAGGTGGCCACAGGTCGAGCACCAG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTCGGTTCTCTCAGTTTaGAGGTGGTGGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHSVLSV*RWWPQL
Trigger: CAGCTGGGGCCACCACCTCCAAACTGAGAGAACCGA...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGAGTCCCACAGGCACTaGCAGAGGTGGGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIESHRH*QRWGWI
Trigger: AATCCAGCCCCACCTCTGCCAGTGCCTGTGGGACTC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCTCGTGAGTGCCTGTaGTCAGTCCAGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAPRECL*SVQTGS
Trigger: GCTCCCTGTCTGGACTGACCACAGGCACTCACGAGG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGCAGGCAGGTTAAACTaGGAGAGGTTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTAGRLN*ERLVGL
Trigger: GAGTCCCACCAACCTCTCCCAGTTTAACCTGCCTGC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGCATTGTGGGGTAGCTTaGGGGAGGCTGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVHCGVA*GRLAGM
Trigger: CATCCCTGCCAGCCTCCCCCAAGCTACCCCACAATG...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACATTGTGGGGTAGCTTaGGGGAGGCTGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAHCGVA*GRLAGM
Trigger: CATCCCTGCCAGCCTCCCCCAAGCTACCCCACAATG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGCTGCAAGTCCTTaGTCAGCCGCTTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGPAASP*SAACGR
Trigger: CCGGCCACAAGCGGCTGATCAAGGACTTGCAGCAGG...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGGGCTTCAGTCTGTCTaGAGATGGTGTGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTGLQSV*RWCGRS
Trigger: ACTTCTCCCACACCATCTTCAGACAGACTGAAGCCC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATACTATGCTGCTGCTGCTaGGGAAGCTGGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFILCCCC*GSWTAP
Trigger: TGGAGCTGTCCAGCTTCCTCAGCAGCAGCAGCATAG...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTCTCCAGGAGCCTGTCTaGGACACAGACAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCLQEPV*DTDRLA
Trigger: AGCCAGCCTGTCTGTGTCTCAGACAGGCTCCTGGAG...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACGGCTGTCTGAGCCCTTaGGTCCCACAGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNGCLSP*VPQALA
Trigger: TGCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCC...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTTGGACCCTGGCTGTCTaGGCCCTTGAGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPWTLAV*ALESHR
Trigger: CCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCA...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCGTACCGGACGACGGTaGCTCCAGACTGCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASARTGRR*LQTALS
Trigger: CGACAAGGCAGTCTGGAGTCACCGTCGTCCGGTACG...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATACAAGCCCACCGGATGTaGAAGAGTGAACCGACGCTG +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIQAHRM*KSEPTL
Trigger: CAGCGTCGGTTCACTCTTTCACATCCGGTGGGCTTG...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTAGGAGTGCTGTCTTCTaGTGCGGAGATCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTRSAVF*CGDLWE
Trigger: CTCCCAAAGATCTCCGCATCAGAAGACAGCACTCCT...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCCGTCCGCAATGTCCTaGTGCAAGTCCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHPSAMS*CKSLIS
Trigger: GCTGATCAAGGACTTGCAGCAGGACATTGCGGACGG...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAATGCTGCGCCAGGGCTTaGTGGCACTCGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKCCARA*WHSGKG
Trigger: TCCCTTCCCCGAGTGCCAGCAAGCCCTGGCGCAGCA...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTCTCCCTGGGCAGACATaGCTCTCCTCCAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPLPGQT*LSSRSL
Trigger: CAGGCTCCTGGAGGAGAGGCATGTCTGCCCAGGGAG...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGTGCGGAGGCAGATTTaGCGCCTGCCTTGGCACCGA +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGVRRQI*RLPWHR
Trigger: TCGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCAC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATACCCCTCAGTATTAGGTaGGGAGGCAGATTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIPLSIR*GGRFAA
Trigger: GGCGGCAAATCTGCCTCCGCACCTAATACTGAGGGG...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTAGCTCGCTCTTCAGCTaGAGAATGATCTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTSSLFS*RMISAS
Trigger: TGAGGCCGAGATCATTCTGCAGCTGAAGAGCGAGCT...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGCTGCTGCTCGCAGCTaGCACCCTAGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDAAARS*HPRGPW
Trigger: CCAGGGCCCTCTAGGGTGCCAGCTGCGAGCAGCAGC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAACACTCGGGGAAGGGATaGCTGAGGCTGGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKHSGKG*LRLGVA
Trigger: GGCAACCCCCAGCCTCAGCCATCCCTTCCCCGAGTG...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTCCATCTTTGTGGGACTaGTACAGGAGTCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTPSLWD*YRSQQV
Trigger: CACCTGCTGACTCCTGTACCAGTCCCACAAAGATGG...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTCCTGCAGCCCGCCAGTaGAATGCGATCGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPPAARQ*NAIAAT
Trigger: AGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGG...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTCAGCAGATAGGCCTTaGACGTTTACTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHSADRP*TFTPRA
Trigger: AGCCCGAGGAGTAAACGTTCAAGGCCTATCTGCTGA...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAGCCTTTGGGAAGGCCTaGGAAGAGCTTCCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAAFGKA*EELPLL
Trigger: TAGCAAGGGAAGCTCTTCTCAGGCCTTCCCAAAGGC...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGATCTGCTATGTTCTTaGCTGTGCGCATTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTDLLCS*LCAFSE
Trigger: CTCGGAGAATGCGCACAGTCAAGAACATAGCAGATC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGAACGCCTCTCTGTATaGCATCTCTGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTERLSV*HLWKLL
Trigger: CAGCAACTTCCAGAGATGTCATACAGAGAGGCGTTC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTGGACTCGAGCGCCCTaGGCCGATCTTAGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGWTRAP*ADLSRF
Trigger: GAACCGACTAAGATCGGCTCAGGGCGCTCGAGTCCA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTCCGGATGTGAAAGAGTaGACCGACGCTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCPDVKE*TDAGLE
Trigger: TTCCAGCCCAGCGTCGGTTCACTCTTTCACATCCGG...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGGGAGCCATGATGGCTaGGGGGCAGGTCAATGGACT +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAGSHDG*GAGQWT
Trigger: AGTCCATTGACCTGCCCCTCAGCCATCATGGCTCCC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTAGGCTCTGCACCTCGTaGGTGCCTGTGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPRLCTS*VPVVSP
Trigger: TGGACTGACCACAGGCACTCACGAGGTGCAGAGCCT...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCAGGCTCTGCACCTCGTaGGTGCCTGTGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASARLCTS*VPVVSP
Trigger: TGGACTGACCACAGGCACTCACGAGGTGCAGAGCCT...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGACAGTGAAGAGCCATaGACTTCCTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTDSEEP*TSSMLS
Trigger: AGACAGCATGGAGGAAGTTCATGGCTCTTCACTGTC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGGAGGCTGGCAGGGATaGGTCTGTCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVGGWQG*VCQLFN
Trigger: ATTGAAGAGCTGACAGACTCATCCCTGCCAGCCTCC...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGCCGTCCGCAATGTCCTaGTGCAAGTCCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVPSAMS*CKSLIS
Trigger: GCTGATCAAGGACTTGCAGCAGGACATTGCGGACGG...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAACCTGAGCCTTGTTGCTaGTGCTCGCAGCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKPEPCC*CSQLAP
Trigger: GGGTGCCAGCTGCGAGCAGCAGCAACAAGGCTCAGG...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGTGACACTTTGGGGCTaGTGTTTGTCGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCVTLWG*CLSSRH
Trigger: GTGGCGGCTCGACAAACAGCAGCCCCAAAGTGTCAC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGCTGGACAGCTCCATTaGCAGGGCTCTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKAGQLH*QGSVHC
Trigger: GCAGTGGACAGAGCCCTGGCAATGGAGCTGTCCAGC...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTCCCCTCAGTATTAGGTaGGGAGGCAGATTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCPLSIR*GGRFAA
Trigger: GGCGGCAAATCTGCCTCCGCACCTAATACTGAGGGG...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCCACCAGCACTGCCCATaGTTCCCGTACCGGACGACG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIHQHCP*FPYRTT
Trigger: CGTCGTCCGGTACGGGAAGCATGGGCAGTGCTGGTG...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCTCAGCCCACCAGCACTaGCCATGCTTCCCGTACCGG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWISAHQH*PCFPYR
Trigger: CCGGTACGGGAAGCATGGGCAGTGCTGGTGGGCTGA...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAAACTTGGAGTGTCCTTaGTGCCGGCAGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFINLECP*CRQRNC
Trigger: GCAGTTCCTCTGCCGGCAGCAAGGACACTCCAAGTT...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGAACTTGGAGTGTCCTTaGTGCCGGCAGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVNLECP*CRQRNC
Trigger: GCAGTTCCTCTGCCGGCAGCAAGGACACTCCAAGTT...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTGTCTTCGATCTCCTTaGCTGTTCCCTGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHCLRSP*LFPAGL
Trigger: AAGCCCTGCAGGGAACAGCCAAGGAGATCGAAGACA...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACGTTGCCCAGAAGTGCTaGGAGGCTGTGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHVAQKC*EAVCFH
Trigger: ATGGAAACACACAGCCTCCCAGCACTTCTGGGCAAC...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAGAAGTGGCTGGGCTTaGCTGCTTCACTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHRSGWA*LLHCQH
Trigger: ATGCTGACAGTGAAGCAGCCAAGCCCAGCCACTTCT...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGGACCCGTCCAGGCTaGTTTTCCTTCCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCGTRPG*FSFLHW
Trigger: CCAATGCAGGAAGGAAAACCAGCCTGGACGGGTCCC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATATACGGTACTGGAGGGTaGTCTTCGAGCTCACGTGCA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIYGTGG*SSSSRA
Trigger: TGCACGTGAGCTCGAAGACCACCCTCCAGTACCGTA...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTCGGTTCTCTCAGTTTaGAGGTGGTGGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCSVLSV*RWWPQL
Trigger: CAGCTGGGGCCACCACCTCCAAACTGAGAGAACCGA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAGGTGGGGCTGGATTTaGGGGAACCTGACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHRWGWI*GNLTRK
Trigger: TTTCCTTGTCAGGTTCCCCCAAATCCAGCCCCACCT...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGTGCCTTCTTCTTGGTTaGCCTGCCGAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVCLLLG*PAEMMG
Trigger: CCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCA...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAGCAGGCAGGTTAAACTaGGAGAGGTTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAAGRLN*ERLVGL
Trigger: GAGTCCCACCAACCTCTCCCAGTTTAACCTGCCTGC...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATGGCGTGGGCACCTTTaGGCCTGGCTTTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKWRGHL*AWLWNS
Trigger: GGAATTCCAAAGCCAGGCTCAAAGGTGCCCACGCCA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGCCTTTGGGAAGGCCTaGGAAGAGCTTCCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCAFGKA*EELPLL
Trigger: TAGCAAGGGAAGCTCTTCTCAGGCCTTCCCAAAGGC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATCTGTTTTCAGCTaGGTGTTCTTCCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVASVFS*VFFLEG
Trigger: CCCCTCCAGGAAGAACACTCAGCTGAAAACAGATGC...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAGGTGGTGGCCCCAGCTaGCTTGCTGCTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKGGGPS*LAADIG
Trigger: TCCAATGTCAGCAGCAAGTCAGCTGGGGCCACCACC...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCTGGACTCGAGCGCCCTaGGCCGATCTTAGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIWTRAP*ADLSRF
Trigger: GAACCGACTAAGATCGGCTCAGGGCGCTCGAGTCCA...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGGCTGTCTGAGCCCTTaGGTCCCACAGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDGCLSP*VPQALA
Trigger: TGCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAAGGGCTGAGCACTACTaGGGAGGACTTCGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKRAEHY*GGLRPL
Trigger: GAGGGGGCGAAGTCCTCCTCAGTAGTGCTCAGCCCT...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAGGTCTGAGGGTTTATTaGAGAGAGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQGLRVY*REGCCC
Trigger: GCAGCAGCAGCCCTCTCTTCAATAAACCCTCAGACC...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCAAGCCCACCGGATGTaGAAGAGTGAACCGACGCTG +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGQAHRM*KSEPTL
Trigger: CAGCGTCGGTTCACTCTTTCACATCCGGTGGGCTTG...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAACAAGCCCACCGGATGTaGAAGAGTGAACCGACGCTG +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKQAHRM*KSEPTL
Trigger: CAGCGTCGGTTCACTCTTTCACATCCGGTGGGCTTG...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGCATTTGCTGACAGCTaGGACGTGAGGGTAGCGACT +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCAFADS*DVRVAT
Trigger: AGTCGCTACCCTCACGTCTCAGCTGTCAGCAAATGC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTAATTCCTTCTCTCTaGGCTCGCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTLIPSL*ARSSAA
Trigger: TGCAGCTGAAGAGCGAGCTCAGAGAGAAGGAATTAA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGCCGAGGACCAATGGTaGCATCAGAAGAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIAEDQW*HQKNCE
Trigger: CTCACAGTTCTTCTGATGTCACCATTGGTCCTCGGC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAATCCGCAATGTCCTGCTaGAAGTCCTTGATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQSAMSC*KSLISR
Trigger: GCGGCTGATCAAGGACTTGCAGCAGGACATTGCGGA...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTGGACTGCATATCTTaGTGGGTTTTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVALDCIS*WVLAWL
Trigger: CAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCCTCCCTGAGCCTTGTTaGTGCTGCTCGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWILPEPC*CCSQLA
Trigger: TGCCAGCTGCGAGCAGCAGCAACAAGGCTCAGGGAG...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAACATTCATGGACTTGCTaGGCCAGGGCTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKHSWTC*ARACWH
Trigger: GTGCCAGCAAGCCCTGGCGCAGCAAGTCCATGAATG...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAACCGCTGCAGTCTTGCTaGCCTTTGGGATCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQPLQSC*PLGSSL
Trigger: CAAGCTTGATCCCAAAGGGCAGCAAGACTGCAGCGG...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACACTGCTCACAGAACTaGTGTCATCCCAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAHCSQN*CHPSCL
Trigger: CAGACAGCTGGGATGACAGCAGTTCTGTGAGCAGTG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGCTCCCTGGGCAGACATaGCTCTCCTCCAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQLPGQT*LSSRSL
Trigger: CAGGCTCCTGGAGGAGAGGCATGTCTGCCCAGGGAG...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGTGCGGAGGCAGATTTaGCGCCTGCCTTGGCACCGA +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDVRRQI*RLPWHR
Trigger: TCGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCAC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCACCAGCACTGCCCATaGTTCCCGTACCGGACGACG +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDHQHCP*FPYRTT
Trigger: CGTCGTCCGGTACGGGAAGCATGGGCAGTGCTGGTG...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTTGGAGTGTCCTTGCTaGCGGCAGAGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCLECPC*RQRNCS
Trigger: TGAGCAGTTCCTCTGCCGGCAGCAAGGACACTCCAA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHSSWLA*RDDGVY
Trigger: ATACACCCCATCATCTCGGCAGGCCAACCAAGAAGA...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTTGGTTGCCAGTATCCTaGAGCCCGCCAGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPWLPVS*SPPVEC
Trigger: GCATTCCACTGGCGGGCTGCAGGATACTGGCAACCA...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGCGCATCATACTGGGTaGAGGCAGGTTAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIAHHTG*RQVKLG
Trigger: TCCCAGTTTAACCTGCCTGCACCCAGTATGATGCGC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAACCTGGGCGGGGATACTaGTGGAGCGCATCATACTGG +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKPGRGY*WSASYW
Trigger: CCAGTATGATGCGCTCCAGCAGTATCCCCGCCCAGG...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGCTGGAATGGCTCGTTaGGCTGTTGATACTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTAGMAR*AVDTRN
Trigger: GTTTCTAGTATCAACAGCGCAACGAGCCATTCCAGC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAAACTTCGGCTTGTACTaGTTGGCTTGGAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVANFGLY*LAWRSR
Trigger: ACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTT...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGGGTTTTGGCCTGGCTaGCTTCGGACTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRGFWPG*LRTEGR
Trigger: CCGCCCCTCAGTCCGAAGCCAGCCAGGCCAAAACCC...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGTATCTTGCTGGGTTTTaGCCTGGCTGGCTTCGGACT +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVYLAGF*PGWLRT
Trigger: AGTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATA...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCTGCGCCAGGGCTTGCTaGCACTCGGGGAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGCARAC*HSGKGW
Trigger: CCATCCCTTCCCCGAGTGCCAGCAAGCCCTGGCGCA...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAATGTGGGAGAAGTGGCTaGGCTTGGCTGCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQCGRSG*AWLLHC
Trigger: ACAGTGAAGCAGCCAAGCCCAGCCACTTCTCCCACA...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAACGCTGTGATGGCCTTTaGGAAGGCCTGAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQRCDGL*EGLRRA
Trigger: AGCTCTTCTCAGGCCTTCCCAAAGGCCATCACAGCG...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCAGTCTCCAGGTCATaGGGGAAGGTCGGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGPVSRS*GKVGLS
Trigger: TGACAAGCCGACCTTCCCCCATGACCTGGAGACTGG...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAGCTGGAGTTCCTCCCTaGGCAGACATGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKAGVPP*ADMPLL
Trigger: GAGGAGAGGCATGTCTGCCCAGGGAGGAACTCCAGC...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGCTGGAGTTCCTCCCTaGGCAGACATGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIAGVPP*ADMPLL
Trigger: GAGGAGAGGCATGTCTGCCCAGGGAGGAACTCCAGC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCTGCCTAGCTGTAGCTaGAGTTCCTCCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGLPSCS*SSSLGR
Trigger: TCTGCCCAGGGAGGAACTCCAGCTACAGCTAGGCAG...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTTCCTTCCTGCATTaGACTTCCCACCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTFSFLH*TSHQWQ
Trigger: CTGCCATTGGTGGGAAGTCCAATGCAGGAAGGAAAA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATCGGTTCTCTCAGTTTaGAGGTGGTGGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKSVLSV*RWWPQL
Trigger: CAGCTGGGGCCACCACCTCCAAACTGAGAGAACCGA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAACATGGACTGGTAACTTaGAGTGTCCTTGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQHGLVT*SVLAAG
Trigger: GCCGGCAGCAAGGACACTCCAAGTTACCAGTCCATG...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGGGCGGGGATACTGCTaGAGCGCATCATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIGRGYC*SASYWV
Trigger: CACCCAGTATGATGCGCTCCAGCAGTATCCCCGCCC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTGGGCAGCAGAGTTCTaGGCCTTCAACATTTCAATG +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTWAAEF*AFNISM
Trigger: CATTGAAATGTTGAAGGCCCAGAACTCTGCTGCCCA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCTTTGGGAGGGTGGTCTaGGCCATTCAGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAFGRVV*AIQCSL
Trigger: CAGGGAGCACTGAATGGCCCAGACCACCCTCCCAAA...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGCGAGGAAGGCGGCTTaGTGGACTTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIARKAA*WTFSCQ
Trigger: TTGGCAAGAAAAAGTCCACCAAGCCGCCTTCCTCGC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCAGCGCCGTGACACACTaGTGCCAAGATTCGGTATCG +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGSAVTH*CQDSVS
Trigger: CGATACCGAATCTTGGCATCAGTGTGTCACGGCGCT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAGGTGGCACTGTGCTTaGCATTCATGGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQRWHCA*HSWTCC
Trigger: GCAGCAAGTCCATGAATGTCAAGCACAGTGCCACCT...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTGCTGCGCTGCCAGGTaGAATAGTTTGCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCCCAAR*NSLLWR
Trigger: ACGCCAAAGCAAACTATTTCACCTGGCAGCGCAGCA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTCTGGTATATAGGTTaGGCCCACCATCTGTCATGT +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTFWYIG*AHHLSC
Trigger: ACATGACAGATGGTGGGCTCAACCTATATACCAGAA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATATCAAGTGTGTCACTaGGGCCACTGCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAYQVCH*GHCSQN
Trigger: GTTCTGTGAGCAGTGGCCTCAGTGACACACTTGATA...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAGCATCTGTTTTCAGCTaGGTGTTCTTCCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQASVFS*VFFLEG
Trigger: CCCCTCCAGGAAGAACACTCAGCTGAAAACAGATGC...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAACGATCTTCCAATGCCTaGCGGTGGCTTTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQRSSNA*RWLFPF
Trigger: GAAGGGAAAAAGCCACCGTCAGGCATTGGAAGATCG...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAGGACAACATCATCTTaGTTCTGGGACCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQRTTSS*FWDPSR
Trigger: CCTGGACGGGTCCCAGAATCAAGATGATGTTGTCCT...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTGGACTCGAGCGCCCTaGGCCGATCTTAGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDWTRAP*ADLSRF
Trigger: GAACCGACTAAGATCGGCTCAGGGCGCTCGAGTCCA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCTGGACCCTGGCTGTCTaGGCCCTTGAGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGWTLAV*ALESHR
Trigger: CCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCA...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGACGTACCGGACGACGGTaGCTCCAGACTGCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGRTGRR*LQTALS
Trigger: CGACAAGGCAGTCTGGAGTCACCGTCGTCCGGTACG...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGCGTACCGGACGACGGTaGCTCCAGACTGCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRRTGRR*LQTALS
Trigger: CGACAAGGCAGTCTGGAGTCACCGTCGTCCGGTACG...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGGTCTGAGGGTTTATTaGAGAGAGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAGLRVY*REGCCC
Trigger: GCAGCAGCAGCCCTCTCTTCAATAAACCCTCAGACC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAACACTACCCGTTCTCATaGGCAGGCTCTGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKHYPFS*AGSAPR
Trigger: ACGAGGTGCAGAGCCTGCTCATGAGAACGGGTAGTG...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGACAGTGAAGAGCCATaGACTTCCTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIDSEEP*TSSMLS
Trigger: AGACAGCATGGAGGAAGTTCATGGCTCTTCACTGTC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCGAGGGCTTCATGGATaGAGAGCCACTCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDRGLHG*RATLAS
Trigger: GCTGGCGAGAGTGGCTCTTCATCCATGAAGCCCTCG...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACTCTTCAGCTGCAGAATaGTCTCGGCCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNSSAAE*SRPQPQ
Trigger: CTGAGGCTGAGGCCGAGATCATTCTGCAGCTGAAGA...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTTCTTCAGCTGCAGAATaGTCTCGGCCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPSSAAE*SRPQPQ
Trigger: CTGAGGCTGAGGCCGAGATCATTCTGCAGCTGAAGA...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCAAAGCTGGGCCTTCCTaGGGCAAGGATGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGKAGPS*GKDAEL
Trigger: GAGTTCTGCATCCTTGCCTCAGGAAGGCCCAGCTTT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCAAAGCTGGGCCTTCCTaGGGCAAGGATGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAKAGPS*GKDAEL
Trigger: GAGTTCTGCATCCTTGCCTCAGGAAGGCCCAGCTTT...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTGGGGAATGTGCTTTaGCGTTGTGGCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVALGNVL*RCGFLC
Trigger: ACAAAGGAAGCCACAACGTCAAAGCACATTCCCCAG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGCCAGAGCCGCTGCCATaGTACAGGGACTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQPEPLP*YRDCTD
Trigger: GTCTGTGCAGTCCCTGTATCATGGCAGCGGCTCTGG...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR GCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAGACATCTCTGGAAGTTaGTGTGTCCGGGACTCGGTT +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQDISGS*CVRDSV
Trigger: AACCGAGTCCCGGACACAGCAACTTCCAGAGATGTC...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGACAGGCTGGCTTTCTaGCCTGTCTTCTCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGDRLAF*PVFSES
Trigger: AGACTCGGAGAAGACAGGGCAGAAAGCCAGCCTGTC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGACAGGCTGGCTTTCTaGCCTGTCTTCTCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPDRLAF*PVFSES
Trigger: AGACTCGGAGAAGACAGGGCAGAAAGCCAGCCTGTC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAATCCCTTCATCCCCGCTaGTTTTCCCTGCATCTGAAG +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQSLHPR*FSLHLK
Trigger: CTTCAGATGCAGGGAAAAGCAGCGGGGATGAAGGGA...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTCATTGGAATCAATGCTaGTGGTGCTCGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCHWNQC*WCSTCG
Trigger: GCCACAGGTCGAGCACCAGCAGCATTGATTCCAATG...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTTTGGAGTGTCCTTGCTaGCGGCAGAGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPLECPC*RQRNCS
Trigger: TGAGCAGTTCCTCTGCCGGCAGCAAGGACACTCCAA...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAATCGCAGCCACTCTTTaGCTTCTTCTTGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAIAATL*LLLGWP
Trigger: AGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGAT...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCTGGTTGCCAGTATCCTaGAGCCCGCCAGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIWLPVS*SPPVEC
Trigger: GCATTCCACTGGCGGGCTGCAGGATACTGGCAACCA...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTACCCCATTATTGTCTaGACTGCATTGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTYPIIV*TALFSQ
Trigger: CTGGCTGAACAATGCAGTGCAGACAATAATGGGGTA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGGATCTTCCCACGGTaGACGTTTCCCATACATCTG +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCGIFPR*TFPIHL
Trigger: CAGATGTATGGGAAACGTGCACCGTGGGAAGATCCC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTAGCGTGAACAGGCTTTaGCCCAACAGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPSVNRL*PNSWLS
Trigger: AGACAGCCAGCTGTTGGGCCAAAGCCTGTTCACGCT...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR CCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAGTTGCCCAGAAGTGCTaGGAGGCTGTGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQVAQKC*EAVCFH
Trigger: ATGGAAACACACAGCCTCCCAGCACTTCTGGGCAAC...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCGCTGTGATGGCCTTTaGGAAGGCCTGAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASARCDGL*EGLRRA
Trigger: AGCTCTTCTCAGGCCTTCCCAAAGGCCATCACAGCG...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAACCACCGTGGCTGTGTTaGGATGGCTATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKPPWLC*DGYAAA
Trigger: AGCAGCAGCATAGCCATCCCAACACAGCCACGGTGG...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGTGCTGTGGCTTATCTaGGTCCCTCGAAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGVLWLI*VPRRLD
Trigger: GTCCAGTCTTCGAGGGACCCAGATAAGCCACAGCAC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGTGCTGTGGCTTATCTaGGTCCCTCGAAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKVLWLI*VPRRLD
Trigger: GTCCAGTCTTCGAGGGACCCAGATAAGCCACAGCAC...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAACCAGTCTCCAGGTCATaGGGGAAGGTCGGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKPVSRS*GKVGLS
Trigger: TGACAAGCCGACCTTCCCCCATGACCTGGAGACTGG...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACAGGAACTGCTCAGATTaGCAGCCCACACAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNRNCSD*QPTQAH
Trigger: GTGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCT...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGCCTCGTGAGTGCCTGTaGTCAGTCCAGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQPRECL*SVQTGS
Trigger: GCTCCCTGTCTGGACTGACCACAGGCACTCACGAGG...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATGGCTGACGATGACATaGCAGAAGGGGAGACCAAGG +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKWLTMT*QKGRPR
Trigger: CCTTGGTCTCCCCTTCTGCCATGTCATCGTCAGCCA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTGGCTGACGATGACATaGCAGAAGGGGAGACCAAGG +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGWLTMT*QKGRPR
Trigger: CCTTGGTCTCCCCTTCTGCCATGTCATCGTCAGCCA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGCAGGCAGGTTAAACTaGGAGAGGTTGGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGAGRLN*ERLVGL
Trigger: GAGTCCCACCAACCTCTCCCAGTTTAACCTGCCTGC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGGCGGGGATACTGCTaGAGCGCATCATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQGRGYC*SASYWV
Trigger: CACCCAGTATGATGCGCTCCAGCAGTATCCCCGCCC...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTGTTCCGCTGTCATaGTTAGACTTTGCAAACGGC +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTFVPLS*LDFANG
Trigger: GCCGTTTGCAAAGTCTAACCATGACAGCGGAACAAA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCTTTGGGAGGGTGGTCTaGGCCATTCAGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIFGRVV*AIQCSL
Trigger: CAGGGAGCACTGAATGGCCCAGACCACCCTCCCAAA...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAGATCTTTGGGAGGGTaGTCTGGGCCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQRSLGG*SGPFSA
Trigger: AGCACTGAATGGCCCAGACCACCCTCCCAAAGATCT...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAAGGAAGGCGGCTTGGTaGACTTTTTCTTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVARKAAW*TFSCQR
Trigger: CCTTTGGCAAGAAAAAGTCCACCAAGCCGCCTTCCT...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATGTCAAGGACCCACTTaGAGGGATCTTCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKCQGPT*RDLPTV
Trigger: CACCGTGGGAAGATCCCTCCAAGTGGGTCCTTGACA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTGTACTGCTTGGCTTaGAGGAGCCGTTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTLYCLA*RSRFHL
Trigger: AAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
3UTR CAA 72 bp AGCGCACGGCAGTTAGAAGGAAGCTGGTCCTTCCCGTaGGCCACAGGCGATTTTATTTTGCGGTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: SARQLEGSWSFP*ATGDFILRWVH
Trigger: GTGCACCCACCGCAAAATAAAATCGCCTGTGGCCAACGGGAAGGACCAGCTTCCTTCTAACTGCCGTGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAACGAGGAACAGCGCCGTaGCACACTGATGCCAAGATT +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKRGTAP*HTDAKI
Trigger: AATCTTGGCATCAGTGTGTCACGGCGCTGTTCCTCG...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR TCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATCAGCAGATAGGCCTTaGACGTTTACTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKSADRP*TFTPRA
Trigger: AGCCCGAGGAGTAAACGTTCAAGGCCTATCTGCTGA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACACGGGGAAGGGATGGCTaGGGCTGGGGGTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTRGRDG*GWGLPR
Trigger: TCTGGGCAACCCCCAGCCTCAGCCATCCCTTCCCCG...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGGGCTTCAGTCTGTCTaGAGATGGTGTGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAGLQSV*RWCGRS
Trigger: ACTTCTCCCACACCATCTTCAGACAGACTGAAGCCC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGTGGCGTGGGCACCTTTaGGCCTGGCTTTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQWRGHL*AWLWNS
Trigger: GGAATTCCAAAGCCAGGCTCAAAGGTGCCCACGCCA...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAGATCTGCTATGTTCTTaGCTGTGCGCATTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQDLLCS*LCAFSE
Trigger: CTCGGAGAATGCGCACAGTCAAGAACATAGCAGATC...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACGCTCATATCTATTTGTaGCATGTTTCCCAGACGCGA +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHAHIYL*HVSQTR
Trigger: TCGCGTCTGGGAAACATGTCACAAATAGATATGAGC...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAATATCAAGTGTGTCACTaGGGCCACTGCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQYQVCH*GHCSQN
Trigger: GTTCTGTGAGCAGTGGCCTCAGTGACACACTTGATA...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACGCATCTGTTTTCAGCTaGGTGTTCTTCCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNASVFS*VFFLEG
Trigger: CCCCTCCAGGAAGAACACTCAGCTGAAAACAGATGC...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAAGGCTCTGCACCTCGTaGGTGCCTGTGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGRLCTS*VPVVSP
Trigger: TGGACTGACCACAGGCACTCACGAGGTGCAGAGCCT...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAACACTACCCGTTCTCATaGGCAGGCTCTGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKHYPFS*AGSAPR
Trigger: ACGAGGTGCAGAGCCTGCTCATGAGAACGGGTAGTG...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCATGCTGTCTCTGAATaGGCCGGAGTGGCTAACGGC +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDHAVSE*AGVANG
Trigger: GCCGTTAGCCACTCCGGCTCATTCAGAGACAGCATG...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATATGGATTTGCTCTGAATaGGCCTTCTCTTCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIWICSE*AFSSAV
Trigger: TACGGCTGAAGAGAAGGCTCATTCAGAGCAAATCCA...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCAAGGTGAGCATTTGCTaGCAGCTGAGACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGKVSIC*QLRREG
Trigger: ACCCTCACGTCTCAGCTGTCAGCAAATGCTCACCTT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAGGAGGCTGGCAGGGATaGGTCTGTCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKGGWQG*VCQLFN
Trigger: ATTGAAGAGCTGACAGACTCATCCCTGCCAGCCTCC...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGCCGAGGACCAATGGTaGCATCAGAAGAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPAEDQW*HQKNCE
Trigger: CTCACAGTTCTTCTGATGTCACCATTGGTCCTCGGC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAACTGGGGAATGTGCTTTaGCGTTGTGGCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQLGNVL*RCGFLC
Trigger: ACAAAGGAAGCCACAACGTCAAAGCACATTCCCCAG...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCTAGACAGAAACCTTaGGAGACACCTTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAPRQKP*ETPSFC
Trigger: GCAGAAAGAAGGTGTCTCTCAAGGTTTCTGTCTAGG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR TCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAACATCCTCATCCAGGTaGGCCGTCCCTTCCCGTAGG +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGTSSSR*AVPSRR
Trigger: CCTACGGGAAGGGACGGCTCACCTGGATGAGGATGT...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR GCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACGTTTACTCCTCGGGCTaGCAGAAAGCTAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNVYSSG*QKAKAD
Trigger: GTCTGCCTTAGCTTTCTGGCAGCCCGAGGAGTAAAC...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAGCTGTCAGACTGGACTaGATATCTTGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAAVRLD*ISCWVL
Trigger: CAAAACCCAGCAAGATATGCAGTCCAGTCTGACAGC...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGCTCCCTGAGCCTTGTTaGTGCTGCTCGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRLPEPC*CCSQLA
Trigger: TGCCAGCTGCGAGCAGCAGCAACAAGGCTCAGGGAG...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCATTCATGGACTTGCTaGGCCAGGGCTTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDHSWTC*ARACWH
Trigger: GTGCCAGCAAGCCCTGGCGCAGCAAGTCCATGAATG...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGACATCTCTGGAAGTTaGTGTGTCCGGGACTCGGTT +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGDISGS*CVRDSV
Trigger: AACCGAGTCCCGGACACAGCAACTTCCAGAGATGTC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGACAGGCTGGCTTTCTaGCCTGTCTTCTCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIDRLAF*PVFSES
Trigger: AGACTCGGAGAAGACAGGGCAGAAAGCCAGCCTGTC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGCTGGTTTTCCTTCCTaGATTGGACTTCCCACCAAT +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIAGFPS*IGLPTN
Trigger: ATTGGTGGGAAGTCCAATGCAGGAAGGAAAACCAGC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGTGCCGGCAGAGGAACTaGTCAGATTGGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQCRQRN*SDWQPT
Trigger: TGTGGGCTGCCAATCTGAGCAGTTCCTCTGCCGGCA...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACGCGCATCATACTGGGTaGAGGCAGGTTAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNAHHTG*RQVKLG
Trigger: TCCCAGTTTAACCTGCCTGCACCCAGTATGATGCGC...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAACACTTTCAGAGGAGTaGTGTCTTCTGATGCGGAGA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFITLSEE*CLLMRR
Trigger: TCTCCGCATCAGAAGACAGCACTCCTCTGAAAGTGT...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGGATCCTATCAAATATaGCTGAGACTTCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTGSYQI*LRLLVL
Trigger: AAGGACCAGAAGTCTCAGGCATATTTGATAGGATCC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTCAGTCTGGGGAATGTaGTTTGACGTTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCSVWGM*FDVVAS
Trigger: GGAAGCCACAACGTCAAAGCACATTCCCCAGACTGA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGAGACACCTTCTTTCTaGATAGTTGGATTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTETPSF*IVGFSL
Trigger: CAGAGAGAATCCAACTATGCAGAAAGAAGGTGTCTC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATTGCCAGGTAGTGGTTaGCCCAGTCAGTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVALPGSG*PSQCKS
Trigger: AGATTTACACTGACTGGGCCAACCACTACCTGGCAA...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTCACCCTAGAGGGCCCTaGAAGCCTAGTAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPHPRGP*KPSRLF
Trigger: AAAAAGCCTACTAGGCTTCCAGGGCCCTCTAGGGTG...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGTCGGCTTGTCAGGTTaGGGATGGCCCTTCCATTCA +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIVGLSG*GWPFHS
Trigger: TGAATGGAAGGGCCATCCCCAACCTGACAAGCCGAC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACACAACCTTCGAAATGTaGGCGAGGCAATATCTGGAT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHTTFEM*ARQYLD
Trigger: ATCCAGATATTGCCTCGCCCACATTTCGAAGGTTGT...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCTGCCTTCTTCTTGGTTaGCCTGCCGAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWICLLLG*PAEMMG
Trigger: CCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCA...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCTGGCTGACGATGACATaGCAGAAGGGGAGACCAAGG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIWLTMT*QKGRPR
Trigger: CCTTGGTCTCCCCTTCTGCCATGTCATCGTCAGCCA...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGAGTGATATTTTCCGGTaGCTGACGATGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVSDIFR*LTMTWQ
Trigger: CTGCCATGTCATCGTCAGCCACCGGAAAATATCACT...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGTAGCGACTTTCTCCTaGGAGGCAACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGVATFS*EATSSL
Trigger: GAGAGAACTGGTTGCCTCCCAGGAGAAAGTCGCTAC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCAGATCTTTGGGAGGGTaGTCTGGGCCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGRSLGG*SGPFSA
Trigger: AGCACTGAATGGCCCAGACCACCCTCCCAAAGATCT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGCGAGGAAGGCGGCTTaGTGGACTTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAARKAA*WTFSCQ
Trigger: TTGGCAAGAAAAAGTCCACCAAGCCGCCTTCCTCGC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATCTGCATCCGGTTCATaGCTTCCCGGATCTGATCGA +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKSASGS*LPGSDR
Trigger: TCGATCAGATCCGGGAAGCCATGAACCGGATGCAGA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGAAAGCCCTAAGGACTaGCGTGAAGAAGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIESPKD*REEEEE
Trigger: CTCTTCTTCTTCTTCACGCCAGTCCTTAGGGCTTTC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATTCACGGGTTCCGTGTaGTTTGCACATAATACCCAC +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAFTGSV*FAHNTH
Trigger: GTGGGTATTATGTGCAAACCACACGGAACCCGTGAA...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATATCGGAAGAGCAGCGTaGACAGGCTTTGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDIGRAA*TGFGPT
Trigger: TGTTGGGCCAAAGCCTGTTCACGCTGCTCTTCCGAT...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCACTGTGTTTAGACTaGGCTGCATATCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAPLCLD*AAYLAV
Trigger: GACAGCCAGATATGCAGCTCAGTCTAAACACAGTGG...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACTCTGACTTCTCCTATTaGGATTGGAGGCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNSDFSY*DWRLPE
Trigger: CTCAGGGAGCCTCCAATCTCAATAGGAGAAGTCAGA...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGAACGCCTCTCTGTATaGCATCTCTGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAERLSV*HLWKLL
Trigger: CAGCAACTTCCAGAGATGTCATACAGAGAGGCGTTC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATCCACTGTCACATCGTaGACGCCTCTCTGTATGACA +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKSTVTS*TPLCMT
Trigger: TGTCATACAGAGAGGCGTTCACGATGTGACAGTGGA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACTCCACTGTCACATCGTaGACGCCTCTCTGTATGACA +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNSTVTS*TPLCMT
Trigger: TGTCATACAGAGAGGCGTTCACGATGTGACAGTGGA...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAAGGACAACATCATCTTaGTTCTGGGACCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKRTTSS*FWDPSR
Trigger: CCTGGACGGGTCCCAGAATCAAGATGATGTTGTCCT...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAAGGTGAGCATTTGCTaGCAGCTGAGACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIKVSIC*QLRREG
Trigger: ACCCTCACGTCTCAGCTGTCAGCAAATGCTCACCTT...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGGGGTTGCCCAGAAGTaGTGGGAGGCTGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRGVAQK*WEAVCF
Trigger: GAAACACACAGCCTCCCAGCACTTCTGGGCAACCCC...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAGTAGAGGTGGCACTGTaGTTGACATTCATGGACTTG +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQVEVAL*LTFMDL
Trigger: CAAGTCCATGAATGTCAAGCACAGTGCCACCTCTAC...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCTGTCGATCTTCCAATaGCTGACGGTGGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASALSIFQ*LTVAFS
Trigger: GGAAAAAGCCACCGTCAGGCATTGGAAGATCGACAG...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTGTATCCAAAAGAACTaGTGGCTGTCGATCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHCIQKN*WLSIFQ
Trigger: TTGGAAGATCGACAGCCAGCAGTTCTTTTGGATACA...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAACATTGGAATCAATGCTaGTGGTGCTCGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKHWNQC*WCSTCG
Trigger: GCCACAGGTCGAGCACCAGCAGCATTGATTCCAATG...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGTTGGAGTGTCCTTGCTaGCGGCAGAGGAACTGCTCA +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQLECPC*RQRNCS
Trigger: TGAGCAGTTCCTCTGCCGGCAGCAAGGACACTCCAA...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTCTGCACCTCGTGAGTaGCTGTGGTCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDSAPRE*LWSVQT
Trigger: TGTCTGGACTGACCACAGGCACTCACGAGGTGCAGA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASASSWLA*RDDGVY
Trigger: ATACACCCCATCATCTCGGCAGGCCAACCAAGAAGA...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTATCGCAGCCACTCTTTaGCTTCTTCTTGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPIAATL*LLLGWP
Trigger: AGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGAT...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACCAGCATCATTACCACTaGCAATGCTGGAATGGCTCG +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNQHHYH*QCWNGS
Trigger: CGAGCCATTCCAGCATTGGCAGTGGTAATGATGCTG...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAATCTTCAATGTCCGAATaGGAGGAAGGCGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKSSMSE*EEGGLV
Trigger: CACCAAGCCGCCTTCCTCGCATTCGGACATTGAAGA...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCTCTTCAATGTCCGAATaGGAGGAAGGCGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWISSMSE*EEGGLV
Trigger: CACCAAGCCGCCTTCCTCGCATTCGGACATTGAAGA...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGCTCGCTCTTCAGCTaGAGAATGATCTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWISSLFS*RMISAS
Trigger: TGAGGCCGAGATCATTCTGCAGCTGAAGAGCGAGCT...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGAGGTTGGCAAGATACTaGTGCAGTTCCTTACTTGAC +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVRLARY*CSSLLD
Trigger: GTCAAGTAAGGAACTGCAGCAGTATCTTGCCAACCT...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGCATTATTGTCTGCACTaGATTGTTCAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVHYCLH*IVQPGW
Trigger: CCAACCTGGCTGAACAATGCAGTGCAGACAATAATG...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTCCTGCGAAGATACCTaGCTAAAAAGCCTTTCACGG +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCSCEDT*LKSLSR
Trigger: CCGTGAAAGGCTTTTTAGGCAGGTATCTTCGCAGGA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGGGATCTTCCCACGGTaGACGTTTCCCATACATCTG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIGIFPR*TFPIHL
Trigger: CAGATGTATGGGAAACGTGCACCGTGGGAAGATCCC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACTTCCTGAGGCAAGGATaGAGAACTCCATGGGTACGT +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNFLRQG*RTPWVR
Trigger: ACGTACCCATGGAGTTCTGCATCCTTGCCTCAGGAA...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATCAGTCTGGGGAATGTaGTTTGACGTTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKSVWGM*FDVVAS
Trigger: GGAAGCCACAACGTCAAAGCACATTCCCCAGACTGA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCCACCCTAGAGGGCCCTaGAAGCCTAGTAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIHPRGP*KPSRLF
Trigger: AAAAAGCCTACTAGGCTTCCAGGGCCCTCTAGGGTG...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAACCATCTTTGTGGGACTaGTACAGGAGTCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKPSLWD*YRSQQV
Trigger: CACCTGCTGACTCCTGTACCAGTCCCACAAAGATGG...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGCCAGTCTCCAGGTCATaGGGGAAGGTCGGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRPVSRS*GKVGLS
Trigger: TGACAAGCCGACCTTCCCCCATGACCTGGAGACTGG...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCCTGCCTAGCTGTAGCTaGAGTTCCTCCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGLPSCS*SSSLGR
Trigger: TCTGCCCAGGGAGGAACTCCAGCTACAGCTAGGCAG...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGATCCAAAAGAACTGCTaGCTGTCGATCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVIQKNC*LSIFQC
Trigger: GCATTGGAAGATCGACAGCCAGCAGTTCTTTTGGAT...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAATTTTCCTTCCTGCATTaGACTTCCCACCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQFSFLH*TSHQWQ
Trigger: CTGCCATTGGTGGGAAGTCCAATGCAGGAAGGAAAA...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATACGGTACTGGAGGGTaGTCTTCGAGCTCACGTGCA +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKYGTGG*SSSSRA
Trigger: TGCACGTGAGCTCGAAGACCACCCTCCAGTACCGTA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGTACGGTACTGGAGGGTaGTCTTCGAGCTCACGTGCA +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQYGTGG*SSSSRA
Trigger: TGCACGTGAGCTCGAAGACCACCCTCCAGTACCGTA...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGTCCCACAGGCACTaGCAGAGGTGGGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSESHRH*QRWGWI
Trigger: AATCCAGCCCCACCTCTGCCAGTGCCTGTGGGACTC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGTAGCGACTTTCTCCTaGGAGGCAACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIVATFS*EATSSL
Trigger: GAGAGAACTGGTTGCCTCCCAGGAGAAAGTCGCTAC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGTTTGTTCCGCTGTCATaGTTAGACTTTGCAAACGGC +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVFVPLS*LDFANG
Trigger: GCCGTTTGCAAAGTCTAACCATGACAGCGGAACAAA...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAATACCACTGCCAATGCTaGAATGGCTCGTTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKYHCQC*NGSLRC
Trigger: ACAGCGCAACGAGCCATTCCAGCATTGGCAGTGGTA...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCAGGAAGGCGGCTTGGTaGACTTTTTCTTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASARKAAW*TFSCQR
Trigger: CCTTTGGCAAGAAAAAGTCCACCAAGCCGCCTTCCT...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATGTCAAGGACCCACTTaGAGGGATCTTCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKCQGPT*RDLPTV
Trigger: CACCGTGGGAAGATCCCTCCAAGTGGGTCCTTGACA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCTCTGACTTCTCCTATTaGGATTGGAGGCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWISDFSY*DWRLPE
Trigger: CTCAGGGAGCCTCCAATCTCAATAGGAGAAGTCAGA...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCATACCTGAAGATGGTTaGGGTCCTTTGGGGGAATCT +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGIPEDG*GPLGES
Trigger: AGATTCCCCCAAAGGACCTCAACCATCTTCAGGTAT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGCGATCTTCCAATGCCTaGCGGTGGCTTTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQRSSNA*RWLFPF
Trigger: GAAGGGAAAAAGCCACCGTCAGGCATTGGAAGATCG...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACACCAGACAGGGAGCCATaGTGGCTGAGGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTPDREP*WLRGRS
Trigger: TGACCTGCCCCTCAGCCATCATGGCTCCCTGTCTGG...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATGGATTTGCTCTGAATaGGCCTTCTCTTCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKWICSE*AFSSAV
Trigger: TACGGCTGAAGAGAAGGCTCATTCAGAGCAAATCCA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATAGGAGTGCTGTCTTCTaGTGCGGAGATCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDRSAVF*CGDLWE
Trigger: CTCCCAAAGATCTCCGCATCAGAAGACAGCACTCCT...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGTCTTCAGCTGCAGAATaGTCTCGGCCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRSSAAE*SRPQPQ
Trigger: CTGAGGCTGAGGCCGAGATCATTCTGCAGCTGAAGA...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGAGAAGAGGCTGTGCTTaGGGAATCAGAAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRRRGCA*GIRRGP
Trigger: AGGCCCCCTTCTGATTCCTCAAGCACAGCCTCTTCT...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACGGCACTTCCAGGTTATaGGATCTAATTAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHGTSRL*DLIKSP
Trigger: AGGAGATTTAATTAGATCTCATAACCTGGAAGTGCC...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATACTGCAGTTCCTTACTTaGCTTGTGGTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFILQFLT*LVVHIK
Trigger: TTTAATGTGGACCACAAGTCAAGTAAGGAACTGCAG...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAAAAGAGCCCACATGGTaGAGATTGTCCAGAATTATG +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIKEPTW*RLSRIM
Trigger: CATAATTCTGGACAATCTTCACCATGTGGGCTCTTT...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTGGGGTGTATCTTTCTaGGAGAGTAGATCTCACACT +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCWGVSF*ESRSHT
Trigger: AGTGTGAGATCTACTCTCTCAGAAAGATACACCCCA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCTGCCAAAGGCTTGCTTaGAAGAACTTCTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASACQRLA*KNFSAS
Trigger: ACTGGCTGAGAAGTTCTTTCAAGCAAGCCTTTGGCA...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR GCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGTGTTTAGACTGAGCTaGATATCTGGCTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCVFRLS*ISGCQT
Trigger: AGTCTGACAGCCAGATATGCAGCTCAGTCTAAACAC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGGCTGAGGCTGGGGGTTaGCCAGAAGTGCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVAEAGG*PEVLGG
Trigger: GCCTCCCAGCACTTCTGGGCAACCCCCAGCCTCAGC...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGTAGAGGTGGCACTGTaGTTGACATTCATGGACTTG +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAVEVAL*LTFMDL
Trigger: CAAGTCCATGAATGTCAAGCACAGTGCCACCTCTAC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACCCAGGTGAAATAGTTTaGTTTGGCGTGGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNPGEIV*FGVGTF
Trigger: AAAGGTGCCCACGCCAAAGCAAACTATTTCACCTGG...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTCCAGGTGAAATAGTTTaGTTTGGCGTGGGCACCTTT +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPPGEIV*FGVGTF
Trigger: AAAGGTGCCCACGCCAAAGCAAACTATTTCACCTGG...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAATCCAGGTCACTGCTTaGTTTCTCGCTCATATCTAT +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAIQVTA*FLAHIY
Trigger: ATAGATATGAGCGAGAAAGCAAGCAGTGACCTGGAT...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGACATCTCTGGAAGTTaGTGTGTCCGGGACTCGGTT +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDDISGS*CVRDSV
Trigger: AACCGAGTCCCGGACACAGCAACTTCCAGAGATGTC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGACGGTGACTCCAGACTaGCTTGTCGGGCTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRTVTPD*LVGLKR
Trigger: CCTCTTTAGCCCGACAAGGCAGTCTGGAGTCACCGT...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACACACCAGCACTGCCCATaGTTCCCGTACCGGACGACG +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTHQHCP*FPYRTT
Trigger: CGTCGTCCGGTACGGGAAGCATGGGCAGTGCTGGTG...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCTCTGCACCTCGTGAGTaGCTGTGGTCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGSAPRE*LWSVQT
Trigger: TGTCTGGACTGACCACAGGCACTCACGAGGTGCAGA...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTTGGTTGCCAGTATCCTaGAGCCCGCCAGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSWLPVS*SPPVEC
Trigger: GCATTCCACTGGCGGGCTGCAGGATACTGGCAACCA...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAGCGCATCATACTGGGTaGAGGCAGGTTAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKAHHTG*RQVKLG
Trigger: TCCCAGTTTAACCTGCCTGCACCCAGTATGATGCGC...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGCTGGAATGGCTCGTTaGGCTGTTGATACTAGAAAC +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAAGMAR*AVDTRN
Trigger: GTTTCTAGTATCAACAGCGCAACGAGCCATTCCAGC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAACATTACCACTGCCAATaGTGGAATGGCTCGTTGCGC +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKHYHCQ*WNGSLR
Trigger: GCGCAACGAGCCATTCCAGCATTGGCAGTGGTAATG...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATAGCTCGCTCTTCAGCTaGAGAATGATCTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDSSLFS*RMISAS
Trigger: TGAGGCCGAGATCATTCTGCAGCTGAAGAGCGAGCT...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATCCTGCGAAGATACCTaGCTAAAAAGCCTTTCACGG +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKSCEDT*LKSLSR
Trigger: CCGTGAAAGGCTTTTTAGGCAGGTATCTTCGCAGGA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGGACTGGCCGCCTCCTaGAGGCAAGCTCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVGLAAS*RQAPGS
Trigger: GGAGCCTGGAGCTTGCCTGCAGGAGGCGGCCAGTCC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CCA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATCATTTGCAATGATCTaGATGATGTCTGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: REHTAQTLLGPCHQHHVASFAMI*MMSARR
Trigger: CCTTCTGGCAGACATCATCCAGATCATTGCAAATGA...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGTATCTTGCTGGGTTTTaGCCTGGCTGGCTTCGGACT +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQYLAGF*PGWLRT
Trigger: AGTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATA...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCTGTGGGAGAAGTGGCTaGGCTTGGCTGCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGCGRSG*AWLLHC
Trigger: ACAGTGAAGCAGCCAAGCCCAGCCACTTCTCCCACA...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCTTAAGCTTTCTTTCTTaGCCGCTGCAGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASALSFLS*PLQSCC
Trigger: GCAGCAAGACTGCAGCGGCCAAGAAAGAAAGCTTAA...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATTTTCCTTCCTGCATTaGACTTCCCACCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKFSFLH*TSHQWQ
Trigger: CTGCCATTGGTGGGAAGTCCAATGCAGGAAGGAAAA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGGGACCCGTCCAGGCTaGTTTTCCTTCCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSGTRPG*FSFLHW
Trigger: CCAATGCAGGAAGGAAAACCAGCCTGGACGGGTCCC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATATTCTCTTTGTCTGTTTaGTTGACAGTGACTGGACTC +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIFSLSV*LTVTGL
Trigger: GAGTCCAGTCACTGTCAACCAAACAGACAAAGAGAA...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGAGGTGGGGCTGGATTTaGGGGAACCTGACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQRWGWI*GNLTRK
Trigger: TTTCCTTGTCAGGTTCCCCCAAATCCAGCCCCACCT...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGGGCGAGGCAATATCTaGATATTTGGACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDGRGNI*IFGPWL
Trigger: CAGCCAGGGTCCAAATATCCAGATATTGCCTCGCCC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAAGGAACTGCTCAGATTaGCAGCCCACACAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGRNCSD*QPTQAH
Trigger: GTGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCT...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGACTCAGAGCTCGTATaGAGACTAGTCATGGACTGG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIDSELV*RLVMDW
Trigger: CCAGTCCATGACTAGTCTCCATACGAGCTCTGAGTC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTCTTTGCCTTCTTCTTaGTTGGCCTGCCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGSLPSS*LACRDD
Trigger: ATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCAGTGATATTTTCCGGTaGCTGACGATGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASASDIFR*LTMTWQ
Trigger: CTGCCATGTCATCGTCAGCCACCGGAAAATATCACT...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTGGGCAGCAGAGTTCTaGGCCTTCAACATTTCAATG +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGWAAEF*AFNISM
Trigger: CATTGAAATGTTGAAGGCCCAGAACTCTGCTGCCCA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTTTTGGGAGGGTGGTCTaGGCCATTCAGTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSFGRVV*AIQCSL
Trigger: CAGGGAGCACTGAATGGCCCAGACCACCCTCCCAAA...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGAGATCTTTGGGAGGGTaGTCTGGGCCATTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQRSLGG*SGPFSA
Trigger: AGCACTGAATGGCCCAGACCACCCTCCCAAAGATCT...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGTACCACTGCCAATGCTaGAATGGCTCGTTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQYHCQC*NGSLRC
Trigger: ACAGCGCAACGAGCCATTCCAGCATTGGCAGTGGTA...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAGCGAGGAAGGCGGCTTaGTGGACTTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKARKAA*WTFSCQ
Trigger: TTGGCAAGAAAAAGTCCACCAAGCCGCCTTCCTCGC...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATTCACGGGTTCCGTGTaGTTTGCACATAATACCCAC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKFTGSV*FAHNTH
Trigger: GTGGGTATTATGTGCAAACCACACGGAACCCGTGAA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGAGTGCTGGGGTAATTaGCGGCTTCTTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDECWGN*RLLGAS
Trigger: TGAAGCTCCAAGAAGCCGCCAATTACCCCAGCACTC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGCCACTGTGTTTAGACTaGGCTGCATATCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQPLCLD*AAYLAV
Trigger: GACAGCCAGATATGCAGCTCAGTCTAAACACAGTGG...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGAGGTGGCACTGTGCTTaGCATTCATGGACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRRWHCA*HSWTCC
Trigger: GCAGCAAGTCCATGAATGTCAAGCACAGTGCCACCT...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCTGCTGCGCTGCCAGGTaGAATAGTTTGCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGCCAAR*NSLLWR
Trigger: ACGCCAAAGCAAACTATTTCACCTGGCAGCGCAGCA...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGCTCATATCTATTTGTaGCATGTTTCCCAGACGCGA +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPAHIYL*HVSQTR
Trigger: TCGCGTCTGGGAAACATGTCACAAATAGATATGAGC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGAACGCCTCTCTGTATaGCATCTCTGGAAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQERLSV*HLWKLL
Trigger: CAGCAACTTCCAGAGATGTCATACAGAGAGGCGTTC...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGTCCACTGTCACATCGTaGACGCCTCTCTGTATGACA +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQSTVTS*TPLCMT
Trigger: TGTCATACAGAGAGGCGTTCACGATGTGACAGTGGA...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGACGATCTTCCAATGCCTaGCGGTGGCTTTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGRSSNA*RWLFPF
Trigger: GAAGGGAAAAAGCCACCGTCAGGCATTGGAAGATCG...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAGGTGGTGGCCCCAGCTaGCTTGCTGCTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTGGGPS*LAADIG
Trigger: TCCAATGTCAGCAGCAAGTCAGCTGGGGCCACCACC...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGAGGGCTGAGCACTACTaGGGAGGACTTCGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVRAEHY*GGLRPL
Trigger: GAGGGGGCGAAGTCCTCCTCAGTAGTGCTCAGCCCT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGCCAGACAGGGAGCCATaGTGGCTGAGGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVPDREP*WLRGRS
Trigger: TGACCTGCCCCTCAGCCATCATGGCTCCCTGTCTGG...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAAAGCTGCATGCTTTCTaGGAGAGTAGATCTCACACT +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKKLHAF*ESRSHT
Trigger: AGTGTGAGATCTACTCTCTCAGAAAGCATGCAGCTT...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCACCAAGTTGGAAAAGTaGTATTTTCCGGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGTKLEK*YFPVAD
Trigger: GTCAGCCACCGGAAAATATCACTTTTCCAACTTGGT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCACCAAGTTGGAAAAGTaGTATTTTCCGGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASATKLEK*YFPVAD
Trigger: GTCAGCCACCGGAAAATATCACTTTTCCAACTTGGT...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGACAGTGAAGAGCCATaGACTTCCTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDDSEEP*TSSMLS
Trigger: AGACAGCATGGAGGAAGTTCATGGCTCTTCACTGTC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGCATTTGCTGACAGCTaGGACGTGAGGGTAGCGACT +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSAFADS*DVRVAT
Trigger: AGTCGCTACCCTCACGTCTCAGCTGTCAGCAAATGC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAATGCCAAAGGCTTGCTTaGAAGAACTTCTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKCQRLA*KNFSAH
Trigger: GTGAGCTGAGAAGTTCTTTCAAGCAAGCCTTTGGCA...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCCCTATCAAATATGCCTaGGACTTCTGGTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIPIKYA*DFWSLA
Trigger: AGCCAAGGACCAGAAGTCTCAGGCATATTTGATAGG...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAACTGCAGTTCCTTACTTaGCTTGTGGTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQLQFLT*LVVHIK
Trigger: TTTAATGTGGACCACAAGTCAAGTAAGGAACTGCAG...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTAAAGAGCCCACATGGTaGAGATTGTCCAGAATTATG +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCKEPTW*RLSRIM
Trigger: CATAATTCTGGACAATCTTCACCATGTGGGCTCTTT...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAGATGAGGAGACTCCCTaGTTCATGGTTCCAATAATA +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQDEETP*FMVPII
Trigger: TATTATTGGAACCATGAATCAGGGAGTCTCCTCATC...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAGCCGAGGACCAATGGTaGCATCAGAAGAACTGTGAG +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGAEDQW*HQKNCE
Trigger: CTCACAGTTCTTCTGATGTCACCATTGGTCCTCGGC...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTACGGTGACTCCAGACTaGCTTGTCGGGCTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSTVTPD*LVGLKR
Trigger: CCTCTTTAGCCCGACAAGGCAGTCTGGAGTCACCGT...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTAACTTGGAGTGTCCTTaGTGCCGGCAGAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSNLECP*CRQRNC
Trigger: GCAGTTCCTCTGCCGGCAGCAAGGACACTCCAAGTT...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGTCTTCAATGTCCGAATaGGAGGAAGGCGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRSSMSE*EEGGLV
Trigger: CACCAAGCCGCCTTCCTCGCATTCGGACATTGAAGA...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAAAGAAGAAGAGGCTGTaGTTGAGGAATCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKKKKRL*LRNQKG
Trigger: CCCCTTCTGATTCCTCAAGCACAGCCTCTTCTTCTT...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAAGAAGAAGAGGCTGTaGTTGAGGAATCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIKKKRL*LRNQKG
Trigger: CCCCTTCTGATTCCTCAAGCACAGCCTCTTCTTCTT...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTTACCCCATTATTGTCTaGACTGCATTGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPYPIIV*TALFSQ
Trigger: CTGGCTGAACAATGCAGTGCAGACAATAATGGGGTA...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATTCCTGAGGCAAGGATaGAGAACTCCATGGGTACGT +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKFLRQG*RTPWVR
Trigger: ACGTACCCATGGAGTTCTGCATCCTTGCCTCAGGAA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTTCCTGAGGCAAGGATaGAGAACTCCATGGGTACGT +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDFLRQG*RTPWVR
Trigger: ACGTACCCATGGAGTTCTGCATCCTTGCCTCAGGAA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAGCTGGAGTTCCTCCCTaGGCAGACATGCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTAGVPP*ADMPLL
Trigger: GAGGAGAGGCATGTCTGCCCAGGGAGGAACTCCAGC...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACATCCAAAAGAACTGCTaGCTGTCGATCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNIQKNC*LSIFQC
Trigger: GCATTGGAAGATCGACAGCCAGCAGTTCTTTTGGAT...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGGGCGAGGCAATATCTaGATATTTGGACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRGRGNI*IFGPWL
Trigger: CAGCCAGGGTCCAAATATCCAGATATTGCCTCGCCC...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAATCTTTGCCTTCTTCTTaGTTGGCCTGCCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKSLPSS*LACRDD
Trigger: ATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGA...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAAGTGATATTTTCCGGTaGCTGACGATGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKSDIFR*LTMTWQ
Trigger: CTGCCATGTCATCGTCAGCCACCGGAAAATATCACT...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACAAAGGGATGATGTGCTaGAGACCAATGACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNKGMMC*RPMTVK
Trigger: CTTCACTGTCATTGGTCTCCAGCACATCATCCCTTT...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCAAAGGGATGATGTGCTaGAGACCAATGACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGKGMMC*RPMTVK
Trigger: CTTCACTGTCATTGGTCTCCAGCACATCATCCCTTT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATTTGTTCCGCTGTCATaGTTAGACTTTGCAAACGGC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKFVPLS*LDFANG
Trigger: GCCGTTTGCAAAGTCTAACCATGACAGCGGAACAAA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAGAAAGCCCTAAGGACTaGCGTGAAGAAGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKESPKD*REEEEE
Trigger: CTCTTCTTCTTCTTCACGCCAGTCCTTAGGGCTTTC...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGTACCTTTGGGTAATTaGCTTAGGAATCAGTGTATC +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIVPLGN*LRNQCI
Trigger: GATACACTGATTCCTAAGCCAATTACCCAAAGGTAC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGAGAGGATAATTCTGTaGTGCTCCATCAACAAGTTA +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIERIIL*CSINKL
Trigger: TAACTTGTTGATGGAGCACCACAGAATTATCCTCTC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCATTGTTCAGCCAGGTTaGCAAGATACTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAIVQPG*QDTAAV
Trigger: AACTGCAGCAGTATCTTGCCAACCTGGCTGAACAAT...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAACCTGCTGCAAGTCCTTaGTCAGCCGCTTGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKPAASP*SAACGR
Trigger: CCGGCCACAAGCGGCTGATCAAGGACTTGCAGCAGG...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAAACCTTCCATTTCCCCTaGTTCAGAAAAGGCATCATC +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKTFHFP*FRKGII
Trigger: GATGATGCCTTTTCTGAATCAGGGGAAATGGAAGGT...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACACTATGCTGCTGCTGCTaGGGAAGCTGGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTLCCCC*GSWTAP
Trigger: TGGAGCTGTCCAGCTTCCTCAGCAGCAGCAGCATAG...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGATCTGCTATGTTCTTaGCTGTGCGCATTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRDLLCS*LCAFSE
Trigger: CTCGGAGAATGCGCACAGTCAAGAACATAGCAGATC...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAATTCTGGTATATAGGTTaGGCCCACCATCTGTCATGT +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKFWYIG*AHHLSC
Trigger: ACATGACAGATGGTGGGCTCAACCTATATACCAGAA...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCAGACCTTTGCAAGGATaGTCCTTTGAGAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGRPLQG*SFERSF
Trigger: AAAACTCCTCTCAAAGGATCATCCTTGCAAAGGTCT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACCTGGAAGCCAAGGAGTaGCTTAAGCTTATAACATCT +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNLEAKE*LKLITS
Trigger: AGATGTTATAAGCTTAAGTCACTCCTTGGCTTCCAG...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTAAGGTGAGCATTTGCTaGCAGCTGAGACGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSKVSIC*QLRREG
Trigger: ACCCTCACGTCTCAGCTGTCAGCAAATGCTCACCTT...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGTTAATTCCTTCTCTCTaGGCTCGCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQLIPSL*ARSSAA
Trigger: TGCAGCTGAAGAGCGAGCTCAGAGAGAAGGAATTAA...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGACCCACCTGAAATTGTaGTGTAGTTCTAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVTHLKL*CSSKFG
Trigger: ACCAAATTTAGAACTACATCACAATTTCAGGTGGGT...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAAGAAAACTATTGAGATaGTGCCATGTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: PPWTPQLWARALDRGLFIRKLLR*CHVLGI
Trigger: GATTCCTAAGACATGGCATCATCTCAATAGTTTTCT...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTTGGTCTTCCAGCTTGTaGCTCACCGGATTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSWSSSL*LTGFFP
Trigger: TGGGAAGAATCCGGTGAGTCACAAGCTGGAAGACCA...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCAGTCAGTGTAAATCTTaGTGTCTTCGATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASASQCKS*CLRSPW
Trigger: CCAAGGAGATCGAAGACAGCAAGATTTACACTGACT...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR GCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAATCCAGGTCACTGCTTaGTTTCTCGCTCATATCTAT +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKIQVTA*FLAHIY
Trigger: ATAGATATGAGCGAGAAAGCAAGCAGTGACCTGGAT...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACTCCCTGGGCAGACATaGCTCTCCTCCAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVLPGQT*LSSRSL
Trigger: CAGGCTCCTGGAGGAGAGGCATGTCTGCCCAGGGAG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTTGTATCCAAAAGAACTaGTGGCTGTCGATCTTCCAA +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPCIQKN*WLSIFQ
Trigger: TTGGAAGATCGACAGCCAGCAGTTCTTTTGGATACA...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAGCTGGTTTTCCTTCCTaGATTGGACTTCCCACCAAT +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKAGFPS*IGLPTN
Trigger: ATTGGTGGGAAGTCCAATGCAGGAAGGAAAACCAGC...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAGGCAGATTTGCCGCCTaGCTTGGCACCGAACAACCT +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTGRFAA*LGTEQP
Trigger: AGGTTGTTCGGTGCCAAGGCAGGCGGCAAATCTGCC...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACATGCCGGCAGAGGAACTaGTCAGATTGGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTCRQRN*SDWQPT
Trigger: TGTGGGCTGCCAATCTGAGCAGTTCCTCTGCCGGCA...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGATCTTCTTGGTTGGCCTaGCGAGATGATGGGGTGTAT +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGSSWLA*RDDGVY
Trigger: ATACACCCCATCATCTCGGCAGGCCAACCAAGAAGA...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGCTGGAATGGCTCGTTaGGCTGTTGATACTAGAAAC +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDAGMAR*AVDTRN
Trigger: GTTTCTAGTATCAACAGCGCAACGAGCCATTCCAGC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATTCTTGCCAAAGGCTTaGTTGAAAGAACTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKFLPKA*LKELLS
Trigger: GCTGAGAAGTTCTTTCAAGCAAGCCTTTGGCAAGAA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGGGATCTTCCCACGGTaGACGTTTCCCATACATCTG +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSGIFPR*TFPIHL
Trigger: CAGATGTATGGGAAACGTGCACCGTGGGAAGATCCC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTCTCTGGCTAGCCTTTaGAGCGTTTCCAAACCAGTT +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDSLASL*SVSKPV
Trigger: AACTGGTTTGGAAACGCTGCAAAGGCTAGCCAGAGA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCACTCGGGGAAGGGATaGCTGAGGCTGGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVHSGKG*LRLGVA
Trigger: GGCAACCCCCAGCCTCAGCCATCCCTTCCCCGAGTG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACACTGCCTAGCTGTAGCTaGAGTTCCTCCCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTLPSCS*SSSLGR
Trigger: TCTGCCCAGGGAGGAACTCCAGCTACAGCTAGGCAG...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAAGCCCCTACACCACTTaGCTTCTTGTATCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKSPYTT*LLVSKR
Trigger: TCTTTTGGATACAAGAAGCCAAGTGGTGTAGGGGCT...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTTCTCTTTGTCTGTTTaGTTGACAGTGACTGGACTC +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGFSLSV*LTVTGL
Trigger: GAGTCCAGTCACTGTCAACCAAACAGACAAAGAGAA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGGGCGAGGCAATATCTaGATATTTGGACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSGRGNI*IFGPWL
Trigger: CAGCCAGGGTCCAAATATCCAGATATTGCCTCGCCC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTGGGACTCACCAAGTTaGAAAAGTGATATTTTCCGG +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGWDSPS*KSDIFR
Trigger: CCGGAAAATATCACTTTTCCAACTTGGTGAGTCCCA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACTGGGACTCACCAAGTTaGAAAAGTGATATTTTCCGG +
Preference number: 4 (lower is better)
Translates to: SVFACSRQGASAGETPLNWDSPS*KSDIFR
Trigger: CCGGAAAATATCACTTTTCCAACTTGGTGAGTCCCA...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGCATTGTGGGGTAGCTTaGGGGAGGCTGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVHCGVA*GRLAGM
Trigger: CATCCCTGCCAGCCTCCCCCAAGCTACCCCACAATG...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTTCTGCATCCGGTTCATaGCTTCCCGGATCTGATCGA +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSSASGS*LPGSDR
Trigger: TCGATCAGATCCGGGAAGCCATGAACCGGATGCAGA...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCATTGTTCAGCCAGGTTaGCAAGATACTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: STGALSPAPCGTKEVPWIIVQPG*QDTAAV
Trigger: AACTGCAGCAGTATCTTGCCAACCTGGCTGAACAAT...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACATGGCTGTCTCAGTTTTaGGGCAACCCCAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTWLSQF*GNPKDR
Trigger: CCTGTCCTTGGGGTTGCCTCAAAACTGAGACAGCCA...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR TCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTATGCTGTTAAAGCTCTaGCTTCTCCTATTGAGATTG +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPMLLKL*LLLLRL
Trigger: CAATCTCAATAGGAGAAGTCAGAGCTTTAACAGCAT...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGATACCTGAAGATGGTTaGGGTCCTTTGGGGGAATCT +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRIPEDG*GPLGES
Trigger: AGATTCCCCCAAAGGACCTCAACCATCTTCAGGTAT...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTGGACCCTGGCTGTCTaGGCCCTTGAGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVWTLAV*ALESHR
Trigger: CCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCCAGACAGGGAGCCATaGTGGCTGAGGGGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVPDREP*WLRGRS
Trigger: TGACCTGCCCCTCAGCCATCATGGCTCCCTGTCTGG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGAAGCTGCATGCTTTCTaGGAGAGTAGATCTCACACT +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQKLHAF*ESRSHT
Trigger: AGTGTGAGATCTACTCTCTCAGAAAGCATGCAGCTT...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACGAGGGCTTCATGGATaGAGAGCCACTCTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVRGLHG*RATLAS
Trigger: GCTGGCGAGAGTGGCTCTTCATCCATGAAGCCCTCG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGGCACTTCCAGGTTATaGGATCTAATTAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKGTSRL*DLIKSP
Trigger: AGGAGATTTAATTAGATCTCATAACCTGGAAGTGCC...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGACACATCCAGGTCACTaGTTGCTTTCTCGCTCATAT +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQTHPGH*LLSRSY
Trigger: ATATGAGCGAGAAAGCAAGCAGTGACCTGGATGTGT...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGTATTTCTGTCAAGCTaGATGCTTTCTGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAVFLSS*MLSERV
Trigger: TACTCTCTCAGAAAGCATGCAGCTTGACAGAAATAC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAACTCTTTTCAAAAGCTaGTACAAGGTGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: WIRRILPEKGSLRPEETKTLFKS*YKVSIC
Trigger: GCAAATGCTCACCTTGTAGCAGCTTTTGAAAAGAGT...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTCAGCATCATTACCACTaGCAATGCTGGAATGGCTCG +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSQHHYH*QCWNGS
Trigger: CGAGCCATTCCAGCATTGGCAGTGGTAATGATGCTG...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAGGATAATTCTGTGGTaGTCCATCAACAAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQRIILW*SINKLK
Trigger: CTTTAACTTGTTGATGGAGCACCACAGAATTATCCT...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAAGGTTGGCAAGATACTaGTGCAGTTCCTTACTTGAC +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKRLARY*CSSLLD
Trigger: GTCAAGTAAGGAACTGCAGCAGTATCTTGCCAACCT...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTTCAGTCTGGGGAATGTaGTTTGACGTTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSSVWGM*FDVVAS
Trigger: GGAAGCCACAACGTCAAAGCACATTCCCCAGACTGA...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCATGGTTGAGGTCCTTTaGGGGAATCTTTTTCATTTC +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGMVEVL*GNLFHF
Trigger: GAAATGAAAAAGATTCCCCCAAAGGACCTCAACCAT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGCTTTCTCGGAAGCTTTaGCATCATCTGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRLSRKL*HHLSSQ
Trigger: CTGGGAAGACAGATGATGCCAAAGCTTCCGAGAAAG...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGACTTTCTCGGAAGCTTTaGCATCATCTGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGLSRKL*HHLSSQ
Trigger: CTGGGAAGACAGATGATGCCAAAGCTTCCGAGAAAG...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATATCCAAAAGAACTGCTaGCTGTCGATCTTCCAATGC +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDIQKNC*LSIFQC
Trigger: GCATTGGAAGATCGACAGCCAGCAGTTCTTTTGGAT...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGAGCCCCTACACCACTTaGCTTCTTGTATCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQSPYTT*LLVSKR
Trigger: TCTTTTGGATACAAGAAGCCAAGTGGTGTAGGGGCT...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACCTCGTGAGTGCCTGTaGTCAGTCCAGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVPRECL*SVQTGS
Trigger: GCTCCCTGTCTGGACTGACCACAGGCACTCACGAGG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCCTGCAGCCCGCCAGTaGAATGCGATCGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVPAARQ*NAIAAT
Trigger: AGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGGGCGGGGATACTGCTaGAGCGCATCATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVGRGYC*SASYWV
Trigger: CACCCAGTATGATGCGCTCCAGCAGTATCCCCGCCC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCTGGGCAGCAGAGTTCTaGGCCTTCAACATTTCAATG +
Preference number: 4 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGWAAEF*AFNISM
Trigger: CATTGAAATGTTGAAGGCCCAGAACTCTGCTGCCCA...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTCTTCTTCTTTTTCTTaGAGTCAGCATCATTACCAC +
Preference number: 4 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCSSSFS*SQHHYH
Trigger: GTGGTAATGATGCTGACTCCAAGAAAAAGAAGAAGA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTTCCTTACTTGACTTGTaGTCCACATTAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPSLLDL*STLKVA
Trigger: TGCTACCTTTAATGTGGACCACAAGTCAAGTAAGGA...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAGGTGCCTTCATTTTCTaGATGTGCCCTATAAATGAA +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKGAFIF*MCPINE
Trigger: TTCATTTATAGGGCACATTCAGAAAATGAAGGCACC...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCTGGAAGCCAAGGAGTaGCTTAAGCTTATAACATCT +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDLEAKE*LKLITS
Trigger: AGATGTTATAAGCTTAAGTCACTCCTTGGCTTCCAG...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGCTGGAAGCCAAGGAGTaGCTTAAGCTTATAACATCT +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQLEAKE*LKLITS
Trigger: AGATGTTATAAGCTTAAGTCACTCCTTGGCTTCCAG...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGGGAGCCATGATGGCTaGGGGGCAGGTCAATGGACT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVGSHDG*GAGQWT
Trigger: AGTCCATTGACCTGCCCCTCAGCCATCATGGCTCCC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACACTACCCGTTCTCATaGGCAGGCTCTGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVHYPFS*AGSAPR
Trigger: ACGAGGTGCAGAGCCTGCTCATGAGAACGGGTAGTG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTTTAATTCCTTCTCTCTaGGCTCGCTCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSLIPSL*ARSSAA
Trigger: TGCAGCTGAAGAGCGAGCTCAGAGAGAAGGAATTAA...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAGTTTACTCCTCGGGCTaGCAGAAAGCTAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTVYSSG*QKAKAD
Trigger: GTCTGCCTTAGCTTTCTGGCAGCCCGAGGAGTAAAC...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGCTGTCAGACTGGACTaGATATCTTGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSAVRLD*ISCWVL
Trigger: CAAAACCCAGCAAGATATGCAGTCCAGTCTGACAGC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGTGACACTTTGGGGCTaGTGTTTGTCGAGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVVTLWG*CLSSRH
Trigger: GTGGCGGCTCGACAAACAGCAGCCCCAAAGTGTCAC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAACACATCCAGGTCACTaGTTGCTTTCTCGCTCATAT +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGTHPGH*LLSRSY
Trigger: ATATGAGCGAGAAAGCAAGCAGTGACCTGGATGTGT...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGCTGGTTTTCCTTCCTaGATTGGACTTCCCACCAAT +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSAGFPS*IGLPTN
Trigger: ATTGGTGGGAAGTCCAATGCAGGAAGGAAAACCAGC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACACATTGGAATCAATGCTaGTGGTGCTCGACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTHWNQC*WCSTCG
Trigger: GCCACAGGTCGAGCACCAGCAGCATTGATTCCAATG...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACCCCTCAGTATTAGGTaGGGAGGCAGATTTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVPLSIR*GGRFAA
Trigger: GGCGGCAAATCTGCCTCCGCACCTAATACTGAGGGG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCCTGGGCGGGGATACTaGTGGAGCGCATCATACTGG +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVPGRGY*WSASYW
Trigger: CCAGTATGATGCGCTCCAGCAGTATCCCCGCCCAGG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCCCTGGGCGGGGATACTaGTGGAGCGCATCATACTGG +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSPGRGY*WSASYW
Trigger: CCAGTATGATGCGCTCCAGCAGTATCCCCGCCCAGG...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTTCTTGCCAAAGGCTTaGTTGAAAGAACTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDFLPKA*LKELLS
Trigger: GCTGAGAAGTTCTTTCAAGCAAGCCTTTGGCAAGAA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTAGGATAATTCTGTGGTaGTCCATCAACAAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPRIILW*SINKLK
Trigger: CTTTAACTTGTTGATGGAGCACCACAGAATTATCCT...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGCATTATTGTCTGCACTaGATTGTTCAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRHYCLH*IVQPGW
Trigger: CCAACCTGGCTGAACAATGCAGTGCAGACAATAATG...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGACATTATTGTCTGCACTaGATTGTTCAGCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGHYCLH*IVQPGW
Trigger: CCAACCTGGCTGAACAATGCAGTGCAGACAATAATG...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACCACCGTGGCTGTGTTaGGATGGCTATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVPPWLC*DGYAAA
Trigger: AGCAGCAGCATAGCCATCCCAACACAGCCACGGTGG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGGTGCTGTGGCTTATCTaGGTCCCTCGAAGACTGGAC +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVVLWLI*VPRRLD
Trigger: GTCCAGTCTTCGAGGGACCCAGATAAGCCACAGCAC...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCAGCCCCTACACCACTTaGCTTCTTGTATCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGSPYTT*LLVSKR
Trigger: TCTTTTGGATACAAGAAGCCAAGTGGTGTAGGGGCT...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGAGTCCCACAGGCACTaGCAGAGGTGGGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVESHRH*QRWGWI
Trigger: AATCCAGCCCCACCTCTGCCAGTGCCTGTGGGACTC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGACAACCTTCGAAATGTaGGCGAGGCAATATCTGGAT +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRTTFEM*ARQYLD
Trigger: ATCCAGATATTGCCTCGCCCACATTTCGAAGGTTGT...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAAGAGAGGATAATTCTGTaGTGCTCCATCAACAAGTTA +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKERIIL*CSINKL
Trigger: TAACTTGTTGATGGAGCACCACAGAATTATCCTCTC...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAGTTTCCATTTATACCTaGAGATGGTTGAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKVSIYT*RWLRSF
Trigger: AAAGGACCTCAACCATCTTCAGGTATAAATGGAAAC...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACATATCAAGTGTGTCACTaGGGCCACTGCTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTYQVCH*GHCSQN
Trigger: GTTCTGTGAGCAGTGGCCTCAGTGACACACTTGATA...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGAGACCTTTGCAAGGATaGTCCTTTGAGAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRRPLQG*SFERSF
Trigger: AAAACTCCTCTCAAAGGATCATCCTTGCAAAGGTCT...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGAGGACAACATCATCTTaGTTCTGGGACCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVRTTSS*FWDPSR
Trigger: CCTGGACGGGTCCCAGAATCAAGATGATGTTGTCCT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGGTCTGAGGGTTTATTaGAGAGAGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVGLRVY*REGCCC
Trigger: GCAGCAGCAGCCCTCTCTTCAATAAACCCTCAGACC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCATGCTGTCTCTGAATaGGCCGGAGTGGCTAACGGC +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVHAVSE*AGVANG
Trigger: GCCGTTAGCCACTCCGGCTCATTCAGAGACAGCATG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGAGGAGTGCTGTCTTCTaGTGCGGAGATCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVRSAVF*CGDLWE
Trigger: CTCCCAAAGATCTCCGCATCAGAAGACAGCACTCCT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAAGAAAACTATTGAGATaGTGCCATGTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: LPEKGSLRPEETKERHEKRKLLR*CHVLGI
Trigger: GATTCCTAAGACATGGCATCATCTCAATAGTTTTCT...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGGGGTTGCCCAGAAGTaGTGGGAGGCTGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVGVAQK*WEAVCF
Trigger: GAAACACACAGCCTCCCAGCACTTCTGGGCAACCCC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCGGCAGATTTGCCGCCTaGCTTGGCACCGAACAACCT +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSGRFAA*LGTEQP
Trigger: AGGTTGTTCGGTGCCAAGGCAGGCGGCAAATCTGCC...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAATCTGGCTGTCAGACTaGACTGCATATCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTIWLSD*TAYLAG
Trigger: CCCAGCAAGATATGCAGTCCAGTCTGACAGCCAGAT...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGAGAAGTGGCTGGGCTTaGCTGCTTCACTGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVRSGWA*LLHCQH
Trigger: ATGCTGACAGTGAAGCAGCCAAGCCCAGCCACTTCT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCGGGACCCGTCCAGGCTaGTTTTCCTTCCTGCATTGG +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSGTRPG*FSFLHW
Trigger: CCAATGCAGGAAGGAAAACCAGCCTGGACGGGTCCC...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGTTCTCTTTGTCTGTTTaGTTGACAGTGACTGGACTC +
Preference number: 4 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRFSLSV*LTVTGL
Trigger: GAGTCCAGTCACTGTCAACCAAACAGACAAAGAGAA...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGAGGTGGGGCTGGATTTaGGGGAACCTGACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVRWGWI*GNLTRK
Trigger: TTTCCTTGTCAGGTTCCCCCAAATCCAGCCCCACCT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACATGGACTGGTAACTTaGAGTGTCCTTGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVHGLVT*SVLAAG
Trigger: GCCGGCAGCAAGGACACTCCAAGTTACCAGTCCATG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCATCTTAGTCCCTTTTTaGGTAGTGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGILVPF*VVYFCQ
Trigger: TTGACAGAAATACACTACCCAAAAAGGGACTAAGAT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATCCTTACTTGACTTGTaGTCCACATTAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SRQGASAGETPLNTNRIKSLLDL*STLKVA
Trigger: TGCTACCTTTAATGTGGACCACAAGTCAAGTAAGGA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTCCTTACTTGACTTGTaGTCCACATTAAAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDSLLDL*STLKVA
Trigger: TGCTACCTTTAATGTGGACCACAAGTCAAGTAAGGA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAATGCTGTTAAAGCTCTaGCTTCTCCTATTGAGATTG +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGMLLKL*LLLLRL
Trigger: CAATCTCAATAGGAGAAGTCAGAGCTTTAACAGCAT...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACCCGGATGTGAAAGAGTaGACCGACGCTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYPDVKE*TDAGLE
Trigger: TTCCAGCCCAGCGTCGGTTCACTCTTTCACATCCGG...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGCATTTGCTGACAGCTaGGACGTGAGGGTAGCGACT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVAFADS*DVRVAT
Trigger: AGTCGCTACCCTCACGTCTCAGCTGTCAGCAAATGC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGAGAAGAGGCTGTGCTTaGGGAATCAGAAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVRRGCA*GIRRGP
Trigger: AGGCCCCCTTCTGATTCCTCAAGCACAGCCTCTTCT...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGACCCACCTGAAATTGTaGTGTAGTTCTAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQTHLKL*CSSKFG
Trigger: ACCAAATTTAGAACTACATCACAATTTCAGGTGGGT...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCAAAGCTGGGCCTTCCTaGGGCAAGGATGCAGAACTC +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSKAGPS*GKDAEL
Trigger: GAGTTCTGCATCCTTGCCTCAGGAAGGCCCAGCTTT...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAACACTGCTCACAGAACTaGTGTCATCCCAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKHCSQN*CHPSCL
Trigger: CAGACAGCTGGGATGACAGCAGTTCTGTGAGCAGTG...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGACGGTGACTCCAGACTaGCTTGTCGGGCTAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVTVTPD*LVGLKR
Trigger: CCTCTTTAGCCCGACAAGGCAGTCTGGAGTCACCGT...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTGCCGGCAGAGGAACTaGTCAGATTGGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYCRQRN*SDWQPT
Trigger: TGTGGGCTGCCAATCTGAGCAGTTCCTCTGCCGGCA...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAACTCTTTTCAAAAGCTaGTACAAGGTGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGTLFKS*YKVSIC
Trigger: GCAAATGCTCACCTTGTAGCAGCTTTTGAAAAGAGT...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTTTCTTGCCAAAGGCTTaGTTGAAAGAACTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSFLPKA*LKELLS
Trigger: GCTGAGAAGTTCTTTCAAGCAAGCCTTTGGCAAGAA...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGGATCCTATCAAATATaGCTGAGACTTCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSGSYQI*LRLLVL
Trigger: AAGGACCAGAAGTCTCAGGCATATTTGATAGGATCC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGATCTGGCTGTCAGACTaGACTGCATATCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVIWLSD*TAYLAG
Trigger: CCCAGCAAGATATGCAGTCCAGTCTGACAGCCAGAT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCGCCTCCGTCGTCACCTaGTCCTTCTCTTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSASVVT*SFSSFP
Trigger: GGGAAAAGAAGAGAAGGACCAGGTGACGACGGAGGC...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGAGGAACTGCTCAGATTaGCAGCCCACACAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVRNCSD*QPTQAH
Trigger: GTGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCT...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAAATCTTAGTCCCTTTTTaGGTAGTGTATTTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKILVPF*VVYFCQ
Trigger: TTGACAGAAATACACTACCCAAAAAGGGACTAAGAT...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTGCCTTCTTCTTGGTTaGCCTGCCGAGATGATGGGG +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVCLLLG*PAEMMG
Trigger: CCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGTAGCGACTTTCTCCTaGGAGGCAACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVVATFS*EATSSL
Trigger: GAGAGAACTGGTTGCCTCCCAGGAGAAAGTCGCTAC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACATTCACGGGTTCCGTGTaGTTTGCACATAATACCCAC +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTFTGSV*FAHNTH
Trigger: GTGGGTATTATGTGCAAACCACACGGAACCCGTGAA...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTGTCAAGGACCCACTTaGAGGGATCTTCCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVCQGPT*RDLPTV
Trigger: CACCGTGGGAAGATCCCTCCAAGTGGGTCCTTGACA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGAGTGCTGGGGTAATTaGCGGCTTCTTGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVECWGN*RLLGAS
Trigger: TGAAGCTCCAAGAAGCCGCCAATTACCCCAGCACTC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTATCGGCTTGTACTGCTTaGCTTGGAGGAGCCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVSACTA*LGGAVF
Trigger: GAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGA...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
3UTR CAA 72 bp ACAAGGGCGACTAGTCCACTCATCCAGCTACATAGATaGATGGTGCACAATAGGTTTGATCCACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TRATSPLIQLHR*MVHNRFDPQLR
Trigger: CCTCAACTGTGGATCAAACCTATTGTGCACCATCAATCTATGTAGCTGGATGAGTGGACTAGTCGCCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGGAGGCTGGCAGGGATaGGTCTGTCAGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYGGWQG*VCQLFN
Trigger: ATTGAAGAGCTGACAGACTCATCCCTGCCAGCCTCC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTCCGCAATGTCCTGCTaGAAGTCCTTGATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYSAMSC*KSLISR
Trigger: GCGGCTGATCAAGGACTTGCAGCAGGACATTGCGGA...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCCTGGACTGCATATCTTaGTGGGTTTTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSLDCIS*WVLAWL
Trigger: CAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAG...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACCCGCTGCAGTCTTGCTaGCCTTTGGGATCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYPLQSC*PLGSSL
Trigger: CAAGCTTGATCCCAAAGGGCAGCAAGACTGCAGCGG...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCACTGCTCACAGAACTaGTGTCATCCCAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVHCSQN*CHPSCL
Trigger: CAGACAGCTGGGATGACAGCAGTTCTGTGAGCAGTG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAACTGTCGATCTTCCAATaGCTGACGGTGGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKLSIFQ*LTVAFS
Trigger: GGAAAAAGCCACCGTCAGGCATTGGAAGATCGACAG...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTCTGCACCTCGTGAGTaGCTGTGGTCAGTCCAGACA +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYSAPRE*LWSVQT
Trigger: TGTCTGGACTGACCACAGGCACTCACGAGGTGCAGA...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAATCGCAGCCACTCTTTaGCTTCTTCTTGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVIAATL*LLLGWP
Trigger: AGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGAT...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCATTACCACTGCCAATaGTGGAATGGCTCGTTGCGC +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVHYHCQ*WNGSLR
Trigger: GCGCAACGAGCCATTCCAGCATTGGCAGTGGTAATG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCCATTACCACTGCCAATaGTGGAATGGCTCGTTGCGC +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSHYHCQ*WNGSLR
Trigger: GCGCAACGAGCCATTCCAGCATTGGCAGTGGTAATG...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAACAGCATCATTACCACTaGCAATGCTGGAATGGCTCG +
Preference number: 4 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKQHHYH*QCWNGS
Trigger: CGAGCCATTCCAGCATTGGCAGTGGTAATGATGCTG...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGTTGCCAGGTAGTGGTTaGCCCAGTCAGTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVLPGSG*PSQCKS
Trigger: AGATTTACACTGACTGGGCCAACCACTACCTGGCAA...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTATGGTTGAGGTCCTTTaGGGGAATCTTTTTCATTTC +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSMVEVL*GNLFHF
Trigger: GAAATGAAAAAGATTCCCCCAAAGGACCTCAACCAT...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGCCTCCGTCGTCACCTaGTCCTTCTCTTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYASVVT*SFSSFP
Trigger: GGGAAAAGAAGAGAAGGACCAGGTGACGACGGAGGC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAACAACCTTCGAAATGTaGGCGAGGCAATATCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTTTFEM*ARQYLD
Trigger: ATCCAGATATTGCCTCGCCCACATTTCGAAGGTTGT...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACCATGGACTGGTAACTTaGAGTGTCCTTGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYHGLVT*SVLAAG
Trigger: GCCGGCAGCAAGGACACTCCAAGTTACCAGTCCATG...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGACTCAGAGCTCGTATaGAGACTAGTCATGGACTGG +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVDSELV*RLVMDW
Trigger: CCAGTCCATGACTAGTCTCCATACGAGCTCTGAGTC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGTACCTTTGGGTAATTaGCTTAGGAATCAGTGTATC +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSVPLGN*LRNQCI
Trigger: GATACACTGATTCCTAAGCCAATTACCCAAAGGTAC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGAGGATAATTCTGTaGTGCTCCATCAACAAGTTA +
Preference number: 4 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSERIIL*CSINKL
Trigger: TAACTTGTTGATGGAGCACCACAGAATTATCCTCTC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CAA 72 bp TCCGAAATCTGCACCAGATACCTCTCATTGCTAATTTaGCTCTACGGAAACCAACCCAAAGGTGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: SEICTRYLSLLI*LYGNQPKGGHR
Trigger: TCTGTGACCACCTTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGATTTCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAAGGTTGATTTTAATGTaGGCTGGCACGAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTRLILM*AGTKAL
Trigger: CAATGCTTTCGTGCCAGCTCACATTAAAATCAACCT...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGGCTCATATCTATTTGTaGCATGTTTCCCAGACGCGA +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVAHIYL*HVSQTR
Trigger: TCGCGTCTGGGAAACATGTCACAAATAGATATGAGC...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAAGACCTTTGCAAGGATaGTCCTTTGAGAGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTRPLQG*SFERSF
Trigger: AAAACTCCTCTCAAAGGATCATCCTTGCAAAGGTCT...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACCTATCAAATATGCCTaGGACTTCTGGTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVPIKYA*DFWSLA
Trigger: AGCCAAGGACCAGAAGTCTCAGGCATATTTGATAGG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCTGGGGAATGTGCTTTaGCGTTGTGGCTTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVLGNVL*RCGFLC
Trigger: ACAAAGGAAGCCACAACGTCAAAGCACATTCCCCAG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGACACATCCAGGTCACTaGTTGCTTTCTCGCTCATAT +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVTHPGH*LLSRSY
Trigger: ATATGAGCGAGAAAGCAAGCAGTGACCTGGATGTGT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTCCCTTCATCCCCGCTaGTTTTCCCTGCATCTGAAG +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYSLHPR*FSLHLK
Trigger: CTTCAGATGCAGGGAAAAGCAGCGGGGATGAAGGGA...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTATCCTGCGAAGATACCTaGCTAAAAAGCCTTTCACGG +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVSCEDT*LKSLSR
Trigger: CCGTGAAAGGCTTTTTAGGCAGGTATCTTCGCAGGA...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTACTTTCTCGGAAGCTTTaGCATCATCTGTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVLSRKL*HHLSSQ
Trigger: CTGGGAAGACAGATGATGCCAAAGCTTCCGAGAAAG...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTACCACTGCCAATGCTaGAATGGCTCGTTGCGCTGT +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYYHCQC*NGSLRC
Trigger: ACAGCGCAACGAGCCATTCCAGCATTGGCAGTGGTA...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAGGTGCCTTCATTTTCTaGATGTGCCCTATAAATGAA +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTGAFIF*MCPINE
Trigger: TTCATTTATAGGGCACATTCAGAAAATGAAGGCACC...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTGGATTTGCTCTGAATaGGCCTTCTCTTCAGCCGTA +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVWICSE*AFSSAV
Trigger: TACGGCTGAAGAGAAGGCTCATTCAGAGCAAATCCA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCTGCCAAAGGCTTGCTTaGAAGAACTTCTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSCQRLA*KNFSAH
Trigger: GTGAGCTGAGAAGTTCTTTCAAGCAAGCCTTTGGCA...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGTGTTTAGACTGAGCTaGATATCTGGCTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVVFRLS*ISGCQT
Trigger: AGTCTGACAGCCAGATATGCAGCTCAGTCTAAACAC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGATCCAGGTCACTGCTTaGTTTCTCGCTCATATCTAT +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVIQVTA*FLAHIY
Trigger: ATAGATATGAGCGAGAAAGCAAGCAGTGACCTGGAT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGGTCATGGTTAGACTTTaGAAACGGCCAGTCATATTC +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVVMVRL*KRPVIF
Trigger: GAATATGACTGGCCGTTTGCAAAGTCTAACCATGAC...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGAAGAAGAAGAGGCTGTaGTTGAGGAATCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVKKKRL*LRNQKG
Trigger: CCCCTTCTGATTCCTCAAGCACAGCCTCTTCTTCTT...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAAGATTTTAATGTGAGCTaGCACGAAAGCATTGAGCGC +
Preference number: 4 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKDFNVS*HESIER
Trigger: GCGCTCAATGCTTTCGTGCCAGCTCACATTAAAATC...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACACTGAGCTGCATATCTaGCTGTCAGACTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYTELHI*LSDWTA
Trigger: TGCAGTCCAGTCTGACAGCCAGATATGCAGCTCAGT...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTTAAGCTTTCTTTCTTaGCCGCTGCAGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVLSFLS*PLQSCC
Trigger: GCAGCAAGACTGCAGCGGCCAAGAAAGAAAGCTTAA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGACTCAGAGCTCGTATaGAGACTAGTCATGGACTGG +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYDSELV*RLVMDW
Trigger: CCAGTCCATGACTAGTCTCCATACGAGCTCTGAGTC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTCTTTGCCTTCTTCTTaGTTGGCCTGCCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVSLPSS*LACRDD
Trigger: ATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCGAAAGCCCTAAGGACTaGCGTGAAGAAGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSESPKD*REEEEE
Trigger: CTCTTCTTCTTCTTCACGCCAGTCCTTAGGGCTTTC...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTTCTGGTATATAGGTTaGGCCCACCATCTGTCATGT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVFWYIG*AHHLSC
Trigger: ACATGACAGATGGTGGGCTCAACCTATATACCAGAA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCACCAAGTTGGAAAAGTaGTATTTTCCGGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSTKLEK*YFPVAD
Trigger: GTCAGCCACCGGAAAATATCACTTTTCCAACTTGGT...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGGGCACTTCCAGGTTATaGGATCTAATTAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVGTSRL*DLIKSP
Trigger: AGGAGATTTAATTAGATCTCATAACCTGGAAGTGCC...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAAAAAGAGCCCACATGGTaGAGATTGTCCAGAATTATG +
Preference number: 4 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKKEPTW*RLSRIM
Trigger: CATAATTCTGGACAATCTTCACCATGTGGGCTCTTT...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAAGAAAACTATTGAGATaGTGCCATGTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTRKLLR*CHVLGI
Trigger: GATTCCTAAGACATGGCATCATCTCAATAGTTTTCT...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGTCATGGTTAGACTTTaGAAACGGCCAGTCATATTC +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVVMVRL*KRPVIF
Trigger: GAATATGACTGGCCGTTTGCAAAGTCTAACCATGAC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACACACTTTCAGAGGAGTaGTGTCTTCTGATGCGGAGA +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYTLSEE*CLLMRR
Trigger: TCTCCGCATCAGAAGACAGCACTCCTCTGAAAGTGT...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCTACCCCATTATTGTCTaGACTGCATTGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSYPIIV*TALFSQ
Trigger: CTGGCTGAACAATGCAGTGCAGACAATAATGGGGTA...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTATGGAGAGGGAAAGGTTaGTCAGAGACTTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVWRGKG*SETFVS
Trigger: AGAAACAAAAGTCTCTGACCAACCTTTCCCTCTCCA...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR TCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACACCTTCCATTTCCCCTaGTTCAGAAAAGGCATCATC +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYTFHFP*FRKGII
Trigger: GATGATGCCTTTTCTGAATCAGGGGAAATGGAAGGT...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCCTGCAGTTCCTTACTTaGCTTGTGGTCCACATTAAA +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSLQFLT*LVVHIK
Trigger: TTTAATGTGGACCACAAGTCAAGTAAGGAACTGCAG...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGCTTTTTCTGACTGGTTaGAATTCCACTGTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVLFLTG*NSTVFR
Trigger: TCTAAACACAGTGGAATTGCAACCAGTCAGAAAAAG...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAAGTATTTCTGTCAAGCTaGATGCTTTCTGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKVFLSS*MLSERV
Trigger: TACTCTCTCAGAAAGCATGCAGCTTGACAGAAATAC...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGGATCCTATCAAATATaGCTGAGACTTCTGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVGSYQI*LRLLVL
Trigger: AAGGACCAGAAGTCTCAGGCATATTTGATAGGATCC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTCATTTGCAATGATCTaGATGATGTCTGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVSFAMI*MMSARR
Trigger: CCTTCTGGCAGACATCATCCAGATCATTGCAAATGA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACAAAGGGATGATGTGCTaGAGACCAATGACAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYKGMMC*RPMTVK
Trigger: CTTCACTGTCATTGGTCTCCAGCACATCATCCCTTT...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCGTTTCCATTTATACCTaGAGATGGTTGAGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: TYPVDCANLTFLYSISTSVSIYT*RWLRSF
Trigger: AAAGGACCTCAACCATCTTCAGGTATAAATGGAAAC...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR TCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAACCCACCTGAAATTGTaGTGTAGTTCTAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVTHLKL*CSSKFG
Trigger: ACCAAATTTAGAACTACATCACAATTTCAGGTGGGT...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTGTATCCAAAAGAACTaGTGGCTGTCGATCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYCIQKN*WLSIFQ
Trigger: TTGGAAGATCGACAGCCAGCAGTTCTTTTGGATACA...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGACTCTTTTCAAAAGCTaGTACAAGGTGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVTLFKS*YKVSIC
Trigger: GCAAATGCTCACCTTGTAGCAGCTTTTGAAAAGAGT...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGTCATGGTTAGACTTTaGAAACGGCCAGTCATATTC +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYVMVRL*KRPVIF
Trigger: GAATATGACTGGCCGTTTGCAAAGTCTAACCATGAC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAAGGATAATTCTGTGGTaGTCCATCAACAAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVRIILW*SINKLK
Trigger: CTTTAACTTGTTGATGGAGCACCACAGAATTATCCT...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR GCA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCTTTTTCTGACTGGTTaGAATTCCACTGTGTTTAGA +
Preference number: 4 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVLFLTG*NSTVFR
Trigger: TCTAAACACAGTGGAATTGCAACCAGTCAGAAAAAG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGTACCTTTGGGTAATTaGCTTAGGAATCAGTGTATC +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYVPLGN*LRNQCI
Trigger: GATACACTGATTCCTAAGCCAATTACCCAAAGGTAC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CAA 72 bp AATGAAGAGACAGTGGAAATTACCAATGGTTTAGTGTaGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NEETVEITNGLV*KRTVETVGEVW
Trigger: CCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAAACCATTGGTAATTTCCACTGTCTCTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
3UTR CAA 72 bp GATGGCCAAGGAAGGGTTCTATGGTTCTCGAATTATTaGCAGGATAGGCAAAGAAATCTCTATTCATATGAT +
Preference number: 4 (lower is better)
Translates to: DGQGRVLWFSNY*QDRQRNLYSYD
Trigger: ATCATATGAATAGAGATTTCTTTGCCTATCCTGCAAATAATTCGAGAACCATAGAACCCTTCCTTGGCCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CCA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTCTTCTTCTTTTTCTTaGAGTCAGCATCATTACCAC +
Preference number: 4 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYSSSFS*SQHHYH
Trigger: GTGGTAATGATGCTGACTCCAAGAAAAAGAAGAAGA...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
3UTR CAA 72 bp GTTATTCAAAATTTCCCCATACATAGACACCACACCTaGTTGTCAATAAATAATTCCACTTTAATGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VIQNFPIHRHHT*LSINNSTLMAR
Trigger: CCTTGCCATTAAAGTGGAATTATTTATTGACAACAAGGTGTGGTGTCTATGTATGGGGAAATTTTGAATAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS TCA 90 bp GGACTTGCTGCGCCAGGGCTTGCTGGCACTCGGGGAAGGGATGGCTaGGGCTGGGGGTTGCCCAGAAGTGCTGGGAGGCTGTGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: GLAAPGLAGTRGRDG*GWGLPRSAGRLCVS
Trigger: GGAAACACACAGCCTCCCAGCACTTCTGGGCAACCCCCAGCCTCAGCCATCCCTTCCCCGAGTGCCAGCAAGCCCTGGCGCAGCAAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 90 bp CTGCTGTGTGTGACCTGCATAACACAGGAGCTGGAGGGAGACGCTTaGCCAGCTTCCCGCCCATCCAGAGGGGTAGAGAGGCTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: LLCVTCITQELEGDA*PASRPSRGVERLGV
Trigger: CACGCCCAGCCTCTCTACCCCTCTGGATGGGCGGGAAGCTGGGCAAGCGTCTCCCTCCAGCTCCTGTGTTATGCAGGTCACACACAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTCCCGAAGGAGCGCTTTaGACCCCTTCTGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTPEGAL*TPSVTG
Trigger: CCCTGTCACAGAAGGGGTCAAAAGCGCTCCTTCGGG...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTCCCTGAATGGCTGCTaGGGCAGCAGAGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTSLNGC*GSRVLG
Trigger: GCCCAGAACTCTGCTGCCCAAGCAGCCATTCAGGGA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp CCCAGCTTCCCGCCCATCCAGAGGGGTAGAGAGGCTGGGCGTGCTTaGTTTCTCCGCTGTGATGGCCTTTGGGAAGGCCTGAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: PSFPPIQRGREAGRA*FLRCDGLWEGLRRA
Trigger: AGCTCTTCTCAGGCCTTCCCAAAGGCCATCACAGCGGAGAAAGCAAGCACGCCCAGCCTCTCTACCCCTCTGGATGGGCGGGAAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp CCGGTGGCTGACGATGACATGGCAGAAGGGGAGACCAAGGGAGACTaGTTGCCAGTATCCTGCAGCCCGCCAGTGGAATGCGATCGCAGC +
Preference number: 5 (lower is better)
Translates to: PVADDDMAEGETKGD*LPVSCSPPVECDRS
Trigger: GCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCCCTTCTGCCATGTCATCGTCAGCCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAGCCACCGTGGCTGTGTaGGGATGGCTATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAATVAV*GWLCCC
Trigger: GCAGCAGCATAGCCATCCCAACACAGCCACGGTGGC...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp CCTCAGTGCACTCGCAGATCGCTGAGGCTGACTGCGAGGGCTTCATaGATGAAGAGCCACTCTCGCCAGCATTGTGGGGTAGCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PQCTRRSLRLTARAS*MKSHSRQHCGVAWG
Trigger: CCCCCAAGCTACCCCACAATGCTGGCGAGAGTGGCTCTTCATCCATGAAGCCCTCGCAGTCAGCCTCAGCGATCTGCGAGTGCACTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACGAGAAGTGGCTGGGCTaGGCTGCTTCACTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHEKWLG*AASLSA
Trigger: TGCTGACAGTGAAGCAGCCAAGCCCAGCCACTTCTC...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTGGCTGTCTGAGCCCTaGAGTCCCACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCWLSEP*SPTGTG
Trigger: GCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCCA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGGTGCGGAGGCAGATTaGCCGCCTGCCTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: STGALSPAPCGTKEVPWIGAEAD*PPALAP
Trigger: CGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCACC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATCCCTGAATGGCTGCTaGGGCAGCAGAGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: REHTAQTLLGPCHQHHVASLNGC*GSRVLG
Trigger: GCCCAGAACTCTGCTGCCCAAGCAGCCATTCAGGGA...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp TGGCTGACGATGACATGGCAGAAGGGGAGACCAAGGGAGACTGGTTaGCAGTATCCTGCAGCCCGCCAGTGGAATGCGATCGCAGCCACT +
Preference number: 5 (lower is better)
Translates to: WLTMTWQKGRPRETG*QYPAARQWNAIAAT
Trigger: AGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCCCTTCTGCCATGTCATCGTCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp GACTGCGAGGGCTTCATGGATGAAGAGCCACTCTCGCCAGCATTGTaGGGTAGCTTGGGGGAGGCTGGCAGGGATGAGTCTGTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: DCEGFMDEEPLSPAL*GSLGEAGRDESVSS
Trigger: AGAGCTGACAGACTCATCCCTGCCAGCCTCCCCCAAGCTACCCCACAATGCTGGCGAGAGTGGCTCTTCATCCATGAAGCCCTCGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTCCTGCTGCAAGTCCTaGATCAGCCGCTTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCSCCKS*ISRLWP
Trigger: CGGCCACAAGCGGCTGATCAAGGACTTGCAGCAGGA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAGAGGAACTGCTCAGATaGGCAGCCCACACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: PPWTPQLWARALDRGLFIEELLR*AAHTSP
Trigger: TGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCTC...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 90 bp GGCGAGGCAATATCTGGATATTTGGACCCTGGCTGTCTGAGCCCTTaGGTCCCACAGGCACTGGCAGAGGTGGGGCTGGATTTGGGGGAA +
Preference number: 5 (lower is better)
Translates to: GEAISGYLDPGCLSP*VPQALAEVGLDLGE
Trigger: TTCCCCCAAATCCAGCCCCACCTCTGCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCAAATATCCAGATATTGCCTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp ACCAAGGGAGACTGGTTGCCAGTATCCTGCAGCCCGCCAGTGGAATaGGATCGCAGCCACTCTTTGCCTTCTTCTTGGTTGGCCTGCCGA +
Preference number: 5 (lower is better)
Translates to: TKGDWLPVSCSPPVE*DRSHSLPSSWLACR
Trigger: TCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp GACATGGCAGAAGGGGAGACCAAGGGAGACTGGTTGCCAGTATCCTaGAGCCCGCCAGTGGAATGCGATCGCAGCCACTCTTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: DMAEGETKGDWLPVS*SPPVECDRSHSLPS
Trigger: AGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCCCTTCTGCCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp GGAGGAGTCCTGGGCGGGGATACTGCTGGAGCGCATCATACTGGGTaGAGGCAGGTTAAACTGGGAGAGGTTGGTGGGACTCACCAAGTT +
Preference number: 5 (lower is better)
Translates to: GGVLGGDTAGAHHTG*RQVKLGEVGGTHQV
Trigger: AACTTGGTGAGTCCCACCAACCTCTCCCAGTTTAACCTGCCTGCACCCAGTATGATGCGCTCCAGCAGTATCCCCGCCCAGGACTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp GGGAGACCAAGGGAGACTGGTTGCCAGTATCCTGCAGCCCGCCAGTaGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GRPRETGCQYPAARQ*NAIAATLCLLLGWP
Trigger: AGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGTTGCTGCGCCAGGGCTaGCTGGCACTCGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRLLRQG*LALGEG
Trigger: CCCTTCCCCGAGTGCCAGCAAGCCCTGGCGCAGCAA...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGTTGACATTCATGGACTaGCTGCGCCAGGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVLTFMD*LRQGLL
Trigger: CAGCAAGCCCTGGCGCAGCAAGTCCATGAATGTCAA...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGTCGGCTTGTCAGGTaGGGGATGGCCCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPGRLVR*GMALPF
Trigger: GAATGGAAGGGCCATCCCCAACCTGACAAGCCGACC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGTCGGTTCTCTCAGTTaGGAGGTGGTGGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGVGSLS*EVVAPA
Trigger: AGCTGGGGCCACCACCTCCAAACTGAGAGAACCGAC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATATTGCCTTCTTCTTGGTaGGCCTGCCGAGATGATGGG +
Preference number: 5 (lower is better)
Translates to: PPWTPQLWARALDRGLFILPSSW*ACRDDG
Trigger: CCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAA...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAACTGATGCGGAGATCTTaGGGAGGGTGGTCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: WIRRILPEKGSLRPEETKLMRRS*GGWSGP
Trigger: TGGCCCAGACCACCCTCCCAAAGATCTCCGCATCAG...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACCTGATGCGGAGATCTTaGGGAGGGTGGTCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: SVFACSRQGASAGETPLNLMRRS*GGWSGP
Trigger: TGGCCCAGACCACCCTCCCAAAGATCTCCGCATCAG...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCAAAGAAGAGGCTGTGCTaGAGGAATCAGAAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAKKRLC*RNQKGA
Trigger: GGCCCCCTTCTGATTCCTCAAGCACAGCCTCTTCTT...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp TGGCTGTCAGACTGGACTGCATATCTTGCTGGGTTTTGGCCTGGCTaGCTTCGGACTGAGGGGCGGTATGAGTCACTCGCTGCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: WLSDWTAYLAGFWPG*LRTEGRYESLAAEA
Trigger: AGCTTCAGCAGCGAGTGACTCATACCGCCCCTCAGTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGTCTGACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp GCTCGGCGGAGAGGCGTGGTATACATAAACCTGGAGGGATCCGTGTaGATGAATCGGCTGGTACCGCTTCGAGAATATCCAGCGCCCATG +
Preference number: 5 (lower is better)
Translates to: ARRRGVVYINLEGSV*MNRLVPLREYPAPM
Trigger: CATGGGCGCTGGATATTCTCGAAGCGGTACCAGCCGATTCATCCACACGGATCCCTCCAGGTTTATGTATACCACGCCTCTCCGCCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp AGGGGTCTTGAGTGCACTTGTGCTGGTTTTCTGCCTAGCTGTAGCTaGAGTTCCTCCCTGGGCAGACATGCCTCTCCTCCAGGAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RGLECTCAGFLPSCS*SSSLGRHASPPGAC
Trigger: ACAGGCTCCTGGAGGAGAGGCATGTCTGCCCAGGGAGGAACTCCAGCTACAGCTAGGCAGAAAACCAGCACAAGTGCACTCAAGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp GCTTCATGGATGAAGAGCCACTCTCGCCAGCATTGTGGGGTAGCTTaGGGGAGGCTGGCAGGGATGAGTCTGTCAGCTCTTCAATGTCCG +
Preference number: 5 (lower is better)
Translates to: ASWMKSHSRQHCGVA*GRLAGMSLSALQCP
Trigger: CGGACATTGAAGAGCTGACAGACTCATCCCTGCCAGCCTCCCCCAAGCTACCCCACAATGCTGGCGAGAGTGGCTCTTCATCCATGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATAACTGGACTGCATATCTaGCTGGGTTTTGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PPWTPQLWARALDRGLFITGLHI*LGFGLA
Trigger: AGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGT...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCCCCGAAGGAGCGCTTTaGACCCCTTCTGTGACAGGG +
Preference number: 5 (lower is better)
Translates to: STGALSPAPCGTKEVPWIPEGAL*TPSVTG
Trigger: CCCTGTCACAGAAGGGGTCAAAAGCGCTCCTTCGGG...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTAATTTAGGTGACACTTaGGGGCTGCTGTTTGTCGAG +
Preference number: 5 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTNLGDT*GLLFVE
Trigger: CTCGACAAACAGCAGCCCCAAAGTGTCACCTAAATT...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGTGGGGGAAGGTCGGCTaGTCAGGTTGGGGATGGCCC +
Preference number: 5 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRWGKVG*SGWGWP
Trigger: GGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCA...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACATGGAGGACGTGGTGTaGAGGTCATCTGTGCTAATG +
Preference number: 5 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHMEDVV*RSSVLM
Trigger: CATTAGCACAGATGACCTCAACACCACGTCCTCCAT...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGAGGTGGGGCTGGATTaGGGGGAACCTGACAAGGAA +
Preference number: 5 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAEVGLD*GEPDKE
Trigger: TTCCTTGTCAGGTTCCCCCAAATCCAGCCCCACCTC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGAGGTGGGGCTGGATTaGGGGGAACCTGACAAGGAA +
Preference number: 5 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPEVGLD*GEPDKE
Trigger: TTCCTTGTCAGGTTCCCCCAAATCCAGCCCCACCTC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTGGCTGTCTGAGCCCTaGAGTCCCACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDWLSEP*SPTGTG
Trigger: GCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCCA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGATCGCAGCCACTCTTaGCCTTCTTCTTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCDRSHS*PSSWLA
Trigger: GGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAATGCGAGGAAGGCGGCTaGGTGGACTTTTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQCEEGG*VDFFLP
Trigger: TGGCAAGAAAAAGTCCACCAAGCCGCCTTCCTCGCA...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTGTGATGTTCAGGTTGTaGAGTGAAAGCCCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTVMFRL*SESPKD
Trigger: GTCCTTAGGGCTTTCACTCAACAACCTGAACATCAC...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCATTGTTCAGCCAGGTaGGCAAGATACTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHHCSAR*ARYCCS
Trigger: ACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATG...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGTGTCAAGGACCCACTaGGAGGGATCTTCCCACGGT +
Preference number: 5 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAVSRTH*EGSSHG
Trigger: ACCGTGGGAAGATCCCTCCAAGTGGGTCCTTGACAC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGTGTCAAGGACCCACTaGGAGGGATCTTCCCACGGT +
Preference number: 5 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPVSRTH*EGSSHG
Trigger: ACCGTGGGAAGATCCCTCCAAGTGGGTCCTTGACAC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCAGCCCAACTTCGGCTaGTACTGCTTGGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAQPNFG*YCLAWR
Trigger: CCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTG...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS TCA 90 bp GCGCTCCGGTGTAGCAAATTCCAGAGGTCTCGAGGAACAGCGCCGTaGCACACTGATGCCAAGATTCGGTATCGGAAGAGCAGCGTGAAC +
Preference number: 5 (lower is better)
Translates to: ALRCSKFQRSRGTAP*HTDAKIRYRKSSVN
Trigger: GTTCACGCTGCTCTTCCGATACCGAATCTTGGCATCAGTGTGTCACGGCGCTGTTCCTCGAGACCTCTGGAATTTGCTACACCGGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS TCA 90 bp GAAATGTGGGCGAGGCAATATCTGGATATTTGGACCCTGGCTGTCTaGGCCCTTGAGTCCCACAGGCACTGGCAGAGGTGGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: EMWARQYLDIWTLAV*ALESHRHWQRWGWI
Trigger: AATCCAGCCCCACCTCTGCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCAAATATCCAGATATTGCCTCGCCCACATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 90 bp CAGAGGAACTGCTCAGATTGGCAGCCCACACAAGCCCACCGGATGTaGAAGAGTGAACCGACGCTGGGCTGGAAGCCAAGGAGTGACTTA +
Preference number: 5 (lower is better)
Translates to: QRNCSDWQPTQAHRM*KSEPTLGWKPRSDL
Trigger: TAAGTCACTCCTTGGCTTCCAGCCCAGCGTCGGTTCACTCTTTCACATCCGGTGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp TCTTCTGATGCGGAGATCTTTGGGAGGGTGGTCTGGGCCATTCAGTaGTCCCTGAATGGCTGCTTGGGCAGCAGAGTTCTGGGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: SSDAEIFGRVVWAIQ*SLNGCLGSRVLGLQ
Trigger: TTGAAGGCCCAGAACTCTGCTGCCCAAGCAGCCATTCAGGGAGCACTGAATGGCCCAGACCACCCTCCCAAAGATCTCCGCATCAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp CTGCATATCTGGCTGTCAGACTGGACTGCATATCTTGCTGGGTTTTaGCCTGGCTGGCTTCGGACTGAGGGGCGGTATGAGTCACTCGCT +
Preference number: 5 (lower is better)
Translates to: LHIWLSDWTAYLAGF*PGWLRTEGRYESLA
Trigger: AGCGAGTGACTCATACCGCCCCTCAGTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGTCTGACAGCCAGATATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp ATTGAGATTGGAGGCTCCCTGAGCCTTGTTGCTGCTGCTCGCAGCTaGCACCCTAGAGGGCCCTGGAAGCCTAGTAGGCTTTTTCTGACT +
Preference number: 5 (lower is better)
Translates to: IEIGGSLSLVAAARS*HPRGPWKPSRLFLT
Trigger: AGTCAGAAAAAGCCTACTAGGCTTCCAGGGCCCTCTAGGGTGCCAGCTGCGAGCAGCAGCAACAAGGCTCAGGGAGCCTCCAATCTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp CACTCGGGGAAGGGATGGCTGAGGCTGGGGGTTGCCCAGAAGTGCTaGGAGGCTGTGTGTTTCCATTTATACCTGAAGATGGTTGAGGTC +
Preference number: 5 (lower is better)
Translates to: HSGKGWLRLGVAQKC*EAVCFHLYLKMVEV
Trigger: GACCTCAACCATCTTCAGGTATAAATGGAAACACACAGCCTCCCAGCACTTCTGGGCAACCCCCAGCCTCAGCCATCCCTTCCCCGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp CAGACATGCCTCTCCTCCAGGAGCCTGTCTGAGACACAGACAGGCTaGCTTTCTGCCCTGTCTTCTCCGAGTCTTCAGCAAGTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: QTCLSSRSLSETQTG*LSALSSPSLQQVQK
Trigger: CTTCTGGACTTGCTGAAGACTCGGAGAAGACAGGGCAGAAAGCCAGCCTGTCTGTGTCTCAGACAGGCTCCTGGAGGAGAGGCATGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp CAACCTTCGAAATGTGGGCGAGGCAATATCTGGATATTTGGACCCTaGCTGTCTGAGCCCTTGAGTCCCACAGGCACTGGCAGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: QPSKCGRGNIWIFGP*LSEPLSPTGTGRGG
Trigger: CCCACCTCTGCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCAAATATCCAGATATTGCCTCGCCCACATTTCGAAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATCCTGCTGCAAGTCCTaGATCAGCCGCTTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: SRQGASAGETPLNTNRIKSCCKS*ISRLWP
Trigger: CGGCCACAAGCGGCTGATCAAGGACTTGCAGCAGGA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAATATCTTGCTGGGTTTaGGCCTGGCTGGCTTCGGAC +
Preference number: 5 (lower is better)
Translates to: WIRRILPEKGSLRPEETKISCWV*AWLASD
Trigger: GTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATAT...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGAGGTGGCACTGTGCTaGACATTCATGGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCEVALC*TFMDLL
Trigger: CAGCAAGTCCATGAATGTCAAGCACAGTGCCACCTC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACATTAAGCTTTCTTTCTaGGCCGCTGCAGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHIKLSF*AAAVLL
Trigger: CAGCAAGACTGCAGCGGCCAAGAAAGAAAGCTTAAT...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAACAGTCGTATCAAAGGTaGTCTCCAGGGTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: WIRRILPEKGSLRPEETKQSYQR*SPGCCG
Trigger: GCCACAGCACCCTGGAGACAACCTTTGATACGACTG...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCAGTCGTATCAAAGGTaGTCTCCAGGGTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAQSYQR*SPGCCG
Trigger: GCCACAGCACCCTGGAGACAACCTTTGATACGACTG...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTTGGGGGAAGGTCGGCTaGTCAGGTTGGGGATGGCCC +
Preference number: 5 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSWGKVG*SGWGWP
Trigger: GGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCA...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCTTCTGGTATATAGGTaGAGCCCACCATCTGTCATG +
Preference number: 5 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHLLVYR*SPPSVM
Trigger: CATGACAGATGGTGGGCTCAACCTATATACCAGAAG...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGTCTTCCCAGGGGTCTaGAGTGCACTTGTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAVFPGV*SALVLV
Trigger: AACCAGCACAAGTGCACTCAAGACCCCTGGGAAGAC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGTCTTCCCAGGGGTCTaGAGTGCACTTGTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPVFPGV*SALVLV
Trigger: AACCAGCACAAGTGCACTCAAGACCCCTGGGAAGAC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACCTTTCTCGGAAGCTTaGGCATCATCTGTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAPFSEA*ASSVFP
Trigger: TGGGAAGACAGATGATGCCAAAGCTTCCGAGAAAGG...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGTGGCCCCAGCTGACTaGCTGCTGACATTGGAATCA +
Preference number: 5 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPVAPAD*LLTLES
Trigger: TGATTCCAATGTCAGCAGCAAGTCAGCTGGGGCCAC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGTGGCCCCAGCTGACTaGCTGCTGACATTGGAATCA +
Preference number: 5 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGVAPAD*LLTLES
Trigger: TGATTCCAATGTCAGCAGCAAGTCAGCTGGGGCCAC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTGGCTCGTTGCGCTGTaGATACTAGAAACACTTTCA +
Preference number: 5 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTWLVAL*ILETLS
Trigger: TGAAAGTGTTTCTAGTATCAACAGCGCAACGAGCCA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 90 bp ATGCGGAGATCTTTGGGAGGGTGGTCTGGGCCATTCAGTGCTCCCTaGATGGCTGCTTGGGCAGCAGAGTTCTGGGCCTTCAACATTTCA +
Preference number: 5 (lower is better)
Translates to: MRRSLGGWSGPFSAP*MAAWAAEFWAFNIS
Trigger: TGAAATGTTGAAGGCCCAGAACTCTGCTGCCCAAGCAGCCATTCAGGGAGCACTGAATGGCCCAGACCACCCTCCCAAAGATCTCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp TCATCTGTCTTCCCAGGGGTCTTGAGTGCACTTGTGCTGGTTTTCTaGCTAGCTGTAGCTGGAGTTCCTCCCTGGGCAGACATGCCTCTC +
Preference number: 5 (lower is better)
Translates to: SSVFPGVLSALVLVF*LAVAGVPPWADMPL
Trigger: GAGAGGCATGTCTGCCCAGGGAGGAACTCCAGCTACAGCTAGGCAGAAAACCAGCACAAGTGCACTCAAGACCCCTGGGAAGACAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp CAGTATCCTGCAGCCCGCCAGTGGAATGCGATCGCAGCCACTCTTTaGCTTCTTCTTGGTTGGCCTGCCGAGATGATGGGGTGTATCTTA +
Preference number: 5 (lower is better)
Translates to: QYPAARQWNAIAATL*LLLGWPAEMMGCIL
Trigger: TAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 90 bp CAGTATCCTGCAGCCCGCCAGTGGAATGCGATCGCAGCCACTCTTTaGCTTCTTCTTGGTTGGCCTGCCGAGATGATGGGGTGTATCTTT +
Preference number: 5 (lower is better)
Translates to: QYPAARQWNAIAATL*LLLGWPAEMMGCIF
Trigger: AAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CCA 90 bp GGTAGAGAGGCTGGGCGTGCTTGCTTTCTCCGCTGTGATGGCCTTTaGGAAGGCCTGAGAAGAGCTTCCCTTGCTAGTCCTGAATTTCTC +
Preference number: 5 (lower is better)
Translates to: GREAGRACFLRCDGL*EGLRRASLASPEFL
Trigger: GAGAAATTCAGGACTAGCAAGGGAAGCTCTTCTCAGGCCTTCCCAAAGGCCATCACAGCGGAGAAAGCAAGCACGCCCAGCCTCTCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp TGCCTTGGCACCGAACAACCTTCGAAATGTGGGCGAGGCAATATCTaGATATTTGGACCCTGGCTGTCTGAGCCCTTGAGTCCCACAGGC +
Preference number: 5 (lower is better)
Translates to: CLGTEQPSKCGRGNI*IFGPWLSEPLSPTG
Trigger: GCCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCAAATATCCAGATATTGCCTCGCCCACATTTCGAAGGTTGTTCGGTGCCAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp GAGGCAAGGATGCAGAACTCCATGGGTACGTGTCAAGGACCCACTTaGAGGGATCTTCCCACGGTGCACGTTTCCCATACATCTGTAGGC +
Preference number: 5 (lower is better)
Translates to: EARMQNSMGTCQGPT*RDLPTVHVSHTSVG
Trigger: GCCTACAGATGTATGGGAAACGTGCACCGTGGGAAGATCCCTCCAAGTGGGTCCTTGACACGTACCCATGGAGTTCTGCATCCTTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAATATCTTGCTGGGTTTaGGCCTGGCTGGCTTCGGAC +
Preference number: 5 (lower is better)
Translates to: LPEKGSLRPEETKERHEKISCWV*AWLASD
Trigger: GTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATAT...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATACAGTCTTGCTGCCCTTaGGGATCAAGCTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: PPWTPQLWARALDRGLFIQSCCP*GSSLQF
Trigger: AAATTGCAAGCTTGATCCCAAAGGGCAGCAAGACTG...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAGGTCGGCTTGTCAGGTaGGGGATGGCCCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGGRLVR*GMALPF
Trigger: GAATGGAAGGGCCATCCCCAACCTGACAAGCCGACC...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTATGGAGGACGTGGTGTaGAGGTCATCTGTGCTAATG +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCMEDVV*RSSVLM
Trigger: CATTAGCACAGATGACCTCAACACCACGTCCTCCAT...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCGTGGCCCCAGCTGACTaGCTGCTGACATTGGAATCA +
Preference number: 5 (lower is better)
Translates to: STGALSPAPCGTKEVPWIVAPAD*LLTLES
Trigger: TGATTCCAATGTCAGCAGCAAGTCAGCTGGGGCCAC...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCGTCGGTTCTCTCAGTTaGGAGGTGGTGGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGVGSLS*EVVAPA
Trigger: AGCTGGGGCCACCACCTCCAAACTGAGAGAACCGAC...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGACTGATGCGGAGATCTTaGGGAGGGTGGTCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGLMRRS*GGWSGP
Trigger: TGGCCCAGACCACCCTCCCAAAGATCTCCGCATCAG...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTCATTGTTCAGCCAGGTaGGCAAGATACTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCHCSAR*ARYCCS
Trigger: ACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATG...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTATTGTCTGCACTGCATaGTTCAGCCAGGTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCIVCTA*FSQVGK
Trigger: CTTGCCAACCTGGCTGAACAATGCAGTGCAGACAAT...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAACTTGTACTGCTTGGCTaGGAGGAGCCGTTTTCATCT +
Preference number: 5 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQLVLLG*EEPFSS
Trigger: AGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAG...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CAA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTTCGGCTTGTACTGCTaGGCTTGGAGGAGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGFGLYC*AWRSRF
Trigger: AAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS TCA 90 bp ACAGAACTGCTGTCATCCCAGCTGTCTGCGTCCACTGTCACATCGTaGACGCCTCTCTGTATGACATCTCTGGAAGTTGCTGTGTCCGGG +
Preference number: 5 (lower is better)
Translates to: TELLSSQLSASTVTS*TPLCMTSLEVAVSG
Trigger: CCCGGACACAGCAACTTCCAGAGATGTCATACAGAGAGGCGTTCACGATGTGACAGTGGACGCAGACAGCTGGGATGACAGCAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 90 bp TACTGGAGGGTGGTCTTCGAGCTCACGTGCAGGACAACATCATCTTaGTTCTGGGACCCGTCCAGGCTGGTTTTCCTTCCTGCATTGGAC +
Preference number: 5 (lower is better)
Translates to: YWRVVFELTCRTTSS*FWDPSRLVFLPALD
Trigger: GTCCAATGCAGGAAGGAAAACCAGCCTGGACGGGTCCCAGAATCAAGATGATGTTGTCCTGCACGTGAGCTCGAAGACCACCCTCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp CCAGTCTCCAGGTCATGGGGGAAGGTCGGCTTGTCAGGTTGGGGATaGCCCTTCCATTCACTTCAGTTGTCACAGTCGTATCAAAGGTTG +
Preference number: 5 (lower is better)
Translates to: PVSRSWGKVGLSGWG*PFHSLQLSQSYQRL
Trigger: CAACCTTTGATACGACTGTGACAACTGAAGTGAATGGAAGGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCATGACCTGGAGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp CTTGACCCAGTCTCCAGGTCATGGGGGAAGGTCGGCTTGTCAGGTTaGGGATGGCCCTTCCATTCACTTCAGTTGTCACAGTCGTATCAA +
Preference number: 5 (lower is better)
Translates to: LDPVSRSWGKVGLSG*GWPFHSLQLSQSYQ
Trigger: TTGATACGACTGTGACAACTGAAGTGAATGGAAGGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCATGACCTGGAGACTGGGTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp AGCCCGCCAGTGGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTaGTTGGCCTGCCGAGATGATGGGGTGTATCTTAGTCCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SPPVECDRSHSLPSS*LACRDDGVYLSPFL
Trigger: CAAAAAGGGACTAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp CCCCTAGTAAGTCACTGTAAAGTGCCTGTTCCAGATCGCCCAGCATaGTCAAGATCACATCCTCATCCAGGTGAGCCGTCCCTTCCCGTA +
Preference number: 5 (lower is better)
Translates to: PLVSHCKVPVPDRPA*SRSHPHPGEPSLPV
Trigger: TACGGGAAGGGACGGCTCACCTGGATGAGGATGTGATCTTGACCATGCTGGGCGATCTGGAACAGGCACTTTACAGTGACTTACTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CCA 90 bp AGCCCGCCAGTGGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTaGTTGGCCTGCCGAGATGATGGGGTGTATCTTTCTGAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: SPPVECDRSHSLPSS*LACRDDGVYLSERV
Trigger: TACTCTCTCAGAAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CAA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAACTGGCTGTCTCAGTTTaGAGGCAACCCCAAGGACAG +
Preference number: 5 (lower is better)
Translates to: SRQGASAGETPLNTNRIKLAVSV*RQPQGQ
Trigger: CTGTCCTTGGGGTTGCCTCAAAACTGAGACAGCCAG...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR CAA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATTATTGCTGAAATTTTaGCTTCCCGCTTTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: REHTAQTLLGPCHQHHVALLLKF*LPAFGG
Trigger: CCCTCCGAAAGCGGGAAGCAAAAATTTCAGCAATAA...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCGCGCAGGCTTTATTCTaGTCCCTGGTCTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAAQALF*SLVFSS
Trigger: AGAGGAAAAGACCAGGGACAAGAATAAAGCCTGCGC...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTCTCAGACTCTTTACTaGCTGCGCTGCCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGSQTLY*LRCQVK
Trigger: TTTCACCTGGCAGCGCAGCAAGTAAAGAGTCTGAGA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAGGAAGAATCCATCTTaGTGGGACTGGTACAGGAGT +
Preference number: 5 (lower is better)
Translates to: HGSEGSCLRRAASAPRKQRKNPS*WDWYRS
Trigger: ACTCCTGTACCAGTCCCACAAAGATGGATTCTTCCT...TTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCTTTCTCGGAAGCTTaGGCATCATCTGTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: QRKFHGSEGSCLRRAASAPFSEA*ASSVFP
Trigger: TGGGAAGACAGATGATGCCAAAGCTTCCGAGAAAGG...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATATGCAAGGATGATCCTTaGAGAGGAGTTTTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: PPWTPQLWARALDRGLFICKDDP*RGVFPF
Trigger: GAAAGGGAAAACTCCTCTCAAAGGATCATCCTTGCA...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACGTTTTCCTTCCTGCATaGGACTTCCCACCAATGGCA +
Preference number: 5 (lower is better)
Translates to: SVFACSRQGASAGETPLNVFLPA*DFPPMA
Trigger: TGCCATTGGTGGGAAGTCCAATGCAGGAAGGAAAAC...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCGTTTTCCTTCCTGCATaGGACTTCCCACCAATGGCA +
Preference number: 5 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGVFLPA*DFPPMA
Trigger: TGCCATTGGTGGGAAGTCCAATGCAGGAAGGAAAAC...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAACAGGACAACATCATCTaGATTCTGGGACCCGTCCAG +
Preference number: 5 (lower is better)
Translates to: LPEKGSLRPEETKERHEKQDNII*ILGPVQ
Trigger: CTGGACGGGTCCCAGAATCAAGATGATGTTGTCCTG...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAGAGGAACTGCTCAGATaGGCAGCCCACACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGEELLR*AAHTSP
Trigger: TGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCTC...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTTGCCTTCTTCTTGGTaGGCCTGCCGAGATGATGGG +
Preference number: 5 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDLPSSW*ACRDDG
Trigger: CCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCATATGGCTCGTTGCGCTGTaGATACTAGAAACACTTTCA +
Preference number: 5 (lower is better)
Translates to: PPWTPQLWARALDRGLFIWLVAL*ILETLS
Trigger: TGAAAGTGTTTCTAGTATCAACAGCGCAACGAGCCA...TATGAAAAGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATGCGAGGAAGGCGGCTaGGTGGACTTTTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SRQGASAGETPLNTNRIKCEEGG*VDFFLP
Trigger: TGGCAAGAAAAAGTCCACCAAGCCGCCTTCCTCGCA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAAAAGAAGAGGCTGTGCTaGAGGAATCAGAAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SRQGASAGETPLNTNRIKKKRLC*RNQKGA
Trigger: GGCCCCCTTCTGATTCCTCAAGCACAGCCTCTTCTT...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTAGTTCCTTACTTGACTaGTGGTCCACATTAAAGGTA +
Preference number: 5 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTSSLLD*WSTLKV
Trigger: TACCTTTAATGTGGACCACAAGTCAAGTAAGGAACT...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGCGTTTCCAAACCAGTaGGAAATGCGCACAGTAGGT +
Preference number: 5 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPAFPNQ*EMRTVG
Trigger: ACCTACTGTGCGCATTTCCAACTGGTTTGGAAACGC...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS TCA 90 bp AGACACATCCAGGTCACTGCTTGCTTTCTCGCTCATATCTATTTGTaGCATGTTTCCCAGACGCGAGACAGCAGCTCGGCGGAGAGGCGT +
Preference number: 5 (lower is better)
Translates to: RHIQVTACFLAHIYL*HVSQTRDSSSAERR
Trigger: ACGCCTCTCCGCCGAGCTGCTGTCTCGCGTCTGGGAAACATGTCACAAATAGATATGAGCGAGAAAGCAAGCAGTGACCTGGATGTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp TCACGTGCAGGACAACATCATCTTGATTCTGGGACCCGTCCAGGCTaGTTTTCCTTCCTGCATTGGACTTCCCACCAATGGCAGCGGATT +
Preference number: 5 (lower is better)
Translates to: SRAGQHHLDSGTRPG*FSFLHWTSHQWQRI
Trigger: AATCCGCTGCCATTGGTGGGAAGTCCAATGCAGGAAGGAAAACCAGCCTGGACGGGTCCCAGAATCAAGATGATGTTGTCCTGCACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp AATGGACTCAGAGCTCGTATGGAGACTAGTCATGGACTGGTAACTTaGAGTGTCCTTGCTGCCGGCAGAGGAACTGCTCAGATTGGCAGC +
Preference number: 5 (lower is better)
Translates to: NGLRARMETSHGLVT*SVLAAGRGTAQIGS
Trigger: GCTGCCAATCTGAGCAGTTCCTCTGCCGGCAGCAAGGACACTCCAAGTTACCAGTCCATGACTAGTCTCCATACGAGCTCTGAGTCCATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp CGCCAGTGGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTTaGCCTGCCGAGATGATGGGGTGTATCTTAGTCCCTTTTTGGGTA +
Preference number: 5 (lower is better)
Translates to: RQWNAIAATLCLLLG*PAEMMGCILVPFWV
Trigger: TACCCAAAAAGGGACTAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCTTGATGATGCTGCTGTaGCTTGTAGCGAGACAAGCT +
Preference number: 5 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGLMMLL*LVARQA
Trigger: AGCTTGTCTCGCTACAAGCAACAGCAGCATCATCAA...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACTTTGGAGGCTTGTTTTaGTCAATGCTGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHFGGLF*SMLLKL
Trigger: GAGCTTTAACAGCATTGACAAAAACAAGCCTCCAAA...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAATTGCTGCGCCAGGGCTaGCTGGCACTCGGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKLLRQG*LALGEG
Trigger: CCCTTCCCCGAGTGCCAGCAAGCCCTGGCGCAGCAA...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTGGACAGGGGACTTTTCCTCTTTTTCTTTaGGCTGCAGCAAAGACTTTT +
Preference number: 5 (lower is better)
Translates to: SATSVDTTTLGQGPGQGTFPLFL*AAAKTF
Trigger: AAAAGTCTTTGCTGCAGCCAAAAGAAAAAGAGGAAA...AGTCCCCTGTCCAGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAGCGCAGGCTTTATTCTaGTCCCTGGTCTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LPEKGSLRPEETKERHEKAQALF*SLVFSS
Trigger: AGAGGAAAAGACCAGGGACAAGAATAAAGCCTGCGC...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCAGATCTGCTATGTTCTaGACTGTGCGCATTCTCCGA +
Preference number: 5 (lower is better)
Translates to: QFQPNSATSVDTTTLGQGRSAMF*TVRILR
Trigger: TCGGAGAATGCGCACAGTCAAGAACATAGCAGATCT...GCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCATTCCATTCACTTCAGTaGTCACAGTCGTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: REHTAQTLLGPCHQHHVAFHSLQ*SQSYQR
Trigger: CCTTTGATACGACTGTGACAACTGAAGTGAATGGAA...TGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGTCTTCCCAGGGGTCTaGAGTGCACTTGTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRVFPGV*SALVLV
Trigger: AACCAGCACAAGTGCACTCAAGACCCCTGGGAAGAC...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTTCTTTGTCTGTTTGGTaGACAGTGACTGGACTCGAG +
Preference number: 5 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPSLSVW*TVTGLE
Trigger: CTCGAGTCCAGTCACTGTCAACCAAACAGACAAAGA...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTGTATTCGCTTGCAGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACTCTTTGTCTGTTTGGTaGACAGTGACTGGACTCGAG +
Preference number: 5 (lower is better)
Translates to: SVFACSRQGASAGETPLNSLSVW*TVTGLE
Trigger: CTCGAGTCCAGTCACTGTCAACCAAACAGACAAAGA...GTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCTGCAAGCGAATACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGTTGCCTTCTTCTTGGTaGGCCTGCCGAGATGATGGG +
Preference number: 5 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRLPSSW*ACRDDG
Trigger: CCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAA...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGTGATGTTCAGGTTGTaGAGTGAAAGCCCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: WIRRILPEKGSLRPEETKVMFRL*SESPKD
Trigger: GTCCTTAGGGCTTTCACTCAACAACCTGAACATCAC...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTTCTGTGATGTTCAGGTaGTTGAGTGAAAGCCCTAAG +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCSVMFR*LSESPK
Trigger: CTTAGGGCTTTCACTCAACAACCTGAACATCACAGA...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAGTTCCTTACTTGACTaGTGGTCCACATTAAAGGTA +
Preference number: 5 (lower is better)
Translates to: GSTQPKLYWGPVTSTMWHSSLLD*WSTLKV
Trigger: TACCTTTAATGTGGACCACAAGTCAAGTAAGGAACT...GTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAAGAAAGGCACGAAAAAGTTGGTCAGAGACTTTaGTTTCTGGAGACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: LPEKGSLRPEETKERHEKVGQRL*FLETGS
Trigger: GGAGCCTGTCTCCAGAAACAAAAGTCTCTGACCAAC...TTTTTCGTGCCTTTCTTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS GCA 90 bp CCCTCGAAGACTGGACATTGTCTCTTCCAAGTTCTGCCTCAGATCTaGTATGTTCTTGACTGTGCGCATTCTCCGAGCTTCAGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: PSKTGHCLFQVLPQI*YVLDCAHSPSFRVL
Trigger: GAGGACCCTGAAGCTCGGAGAATGCGCACAGTCAAGAACATAGCAGATCTGAGGCAGAACTTGGAAGAGACAATGTCCAGTCTTCGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp TTTCTCGGAAGCTTTGGCATCATCTGTCTTCCCAGGGGTCTTGAGTaGACTTGTGCTGGTTTTCTGCCTAGCTGTAGCTGGAGTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FLGSFGIICLPRGLE*TCAGFLPSCSWSSS
Trigger: GGAGGAACTCCAGCTACAGCTAGGCAGAAAACCAGCACAAGTGCACTCAAGACCCCTGGGAAGACAGATGATGCCAAAGCTTCCGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp GAATGGCTCGTTGCGCTGTTGATACTAGAAACACTTTCAGAGGAGTaGTGTCTTCTGATGCGGAGATCTTTGGGAGGGTGGTCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: EWLVALLILETLSEE*CLLMRRSLGGWSGP
Trigger: TGGCCCAGACCACCCTCCCAAAGATCTCCGCATCAGAAGACAGCACTCCTCTGAAAGTGTTTCTAGTATCAACAGCGCAACGAGCCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGTTTGGAGGCTTGTTTTaGTCAATGCTGTTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: VREHTAQTLLGPCHQHHVFGGLF*SMLLKL
Trigger: GAGCTTTAACAGCATTGACAAAAACAAGCCTCCAAA...CACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAAATTAAGCTTTCTTTCTaGGCCGCTGCAGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKIKLSF*AAAVLL
Trigger: CAGCAAGACTGCAGCGGCCAAGAAAGAAAGCTTAAT...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCCATCCAGGTCACTGCTaGCTTTCTCGCTCATATCTA +
Preference number: 5 (lower is better)
Translates to: STGALSPAPCGTKEVPWIHPGHC*LSRSYL
Trigger: TAGATATGAGCGAGAAAGCAAGCAGTGACCTGGATG...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAACTTCTGGTATATAGGTaGAGCCCACCATCTGTCATG +
Preference number: 5 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKLLVYR*SPPSVM
Trigger: CATGACAGATGGTGGGCTCAACCTATATACCAGAAG...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGCCTTTCTCGGAAGCTTaGGCATCATCTGTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQPFSEA*ASSVFP
Trigger: TGGGAAGACAGATGATGCCAAAGCTTCCGAGAAAGG...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGCAGGACAACATCATCTaGATTCTGGGACCCGTCCAG +
Preference number: 5 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRQDNII*ILGPVQ
Trigger: CTGGACGGGTCCCAGAATCAAGATGATGTTGTCCTG...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGCAATATCTGGATATTaGGACCCTGGCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDAISGY*DPGCLS
Trigger: GCTCAGACAGCCAGGGTCCAAATATCCAGATATTGC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGGTGCGGAGGCAGATTaGCCGCCTGCCTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVGAEAD*PPALAP
Trigger: CGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCACC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAACATCCTTATGTCCTGTaGCATCACCAGTGTCATCTA +
Preference number: 5 (lower is better)
Translates to: WIRRILPEKGSLRPEETKHPYVL*HHQCHL
Trigger: TAGATGACACTGGTGATGCAACAGGACATAAGGATG...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGTGAGGGAGCACACAGCCCAAACTCTACTGGGGCCCTGTCACCAGCACCATGTGATGTAGTTCTAAATTaGGTGATGAGGAGACTCCCT +
Preference number: 5 (lower is better)
Translates to: SEGAHSPNSTGALSPAPCDVVLN*VMRRLP
Trigger: AGGGAGTCTCCTCATCACCAAATTTAGAACTACATC...ACATGGTGCTGGTGACAGGGCCCCAGTAGAGTTTGGGCTGTGTGCTCCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp CACCCTAGAGGGCCCTGGAAGCCTAGTAGGCTTTTTCTGACTGGTTaGAATTCCACTGTGTTTAGACTGAGCTGCATATCTGGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: HPRGPWKPSRLFLTG*NSTVFRLSCISGCQ
Trigger: CTGACAGCCAGATATGCAGCTCAGTCTAAACACAGTGGAATTGCAACCAGTCAGAAAAAGCCTACTAGGCTTCCAGGGCCCTCTAGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 90 bp GTAGGCAGCTTTCCCCTTCCTCTTCAGCCCAACTTCGGCTTGTACTaGTTGGCTTGGAGGAGCCGTTTTCATCTTCAGACTTACTGTCTT +
Preference number: 5 (lower is better)
Translates to: VGSFPLPLQPNFGLY*LAWRSRFHLQTYCL
Trigger: AAGACAGTAAGTCTGAAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTGAAGAGGAAGGGGAAAGCTGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS GCA 90 bp GTGGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTGTATCTTTCTGAGAGAGTAGATCTCACA +
Preference number: 5 (lower is better)
Translates to: VECDRSHSLPSSWLA*RDDGVYLSERVDLT
Trigger: TGTGAGATCTACTCTCTCAGAAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CCA 90 bp AGGTTGTCTCCAGGGTGCTGTGGCTTATCTGGGTCCCTCGAAGACTaGACATTGTCTCTTCCAAGTTCTGCCTCAGATCTGCTATGTTCT +
Preference number: 5 (lower is better)
Translates to: RLSPGCCGLSGSLED*TLSLPSSASDLLCS
Trigger: AGAACATAGCAGATCTGAGGCAGAACTTGGAAGAGACAATGTCCAGTCTTCGAGGGACCCAGATAAGCCACAGCACCCTGGAGACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp GGTGGCACCGCTGCTGGTAATCATAGTGGAAGCCCCTACACCACTTaGCTTCTTGTATCCAAAAGAACTGCTGGCTGTCGATCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: GGTAAGNHSGSPYTT*LLVSKRTAGCRSSN
Trigger: ATTGGAAGATCGACAGCCAGCAGTTCTTTTGGATACAAGAAGCCAAGTGGTGTAGGGGCTTCCACTATGATTACCAGCAGCGGTGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp GCAGCTTTCCCCTTCCTCTTCAGCCCAACTTCGGCTTGTACTGCTTaGCTTGGAGGAGCCGTTTTCATCTTCAGACTTACTGTCTTCATC +
Preference number: 5 (lower is better)
Translates to: AAFPFLFSPTSACTA*LGGAVFIFRLTVFI
Trigger: GATGAAGACAGTAAGTCTGAAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTGAAGAGGAAGGGGAAAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CAA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCAGTCTTGCTGCCCTTaGGGATCAAGCTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDQSCCP*GSSLQF
Trigger: AAATTGCAAGCTTGATCCCAAAGGGCAGCAAGACTG...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGCCACCGTGGCTGTGTaGGGATGGCTATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVATVAV*GWLCCC
Trigger: GCAGCAGCATAGCCATCCCAACACAGCCACGGTGGC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGAGATCTGCTATGTTCTaGACTGTGCGCATTCTCCGA +
Preference number: 5 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQRSAMF*TVRILR
Trigger: TCGGAGAATGCGCACAGTCAAGAACATAGCAGATCT...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCATGGAGGACGTGGTGTaGAGGTCATCTGTGCTAATG +
Preference number: 5 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGMEDVV*RSSVLM
Trigger: CATTAGCACAGATGACCTCAACACCACGTCCTCCAT...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAATGCAAGGATGATCCTTaGAGAGGAGTTTTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKCKDDP*RGVFPF
Trigger: GAAAGGGAAAACTCCTCTCAAAGGATCATCCTTGCA...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTCTTTGTCTGTTTGGTaGACAGTGACTGGACTCGAG +
Preference number: 5 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDSLSVW*TVTGLE
Trigger: CTCGAGTCCAGTCACTGTCAACCAAACAGACAAAGA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGGTGCGGAGGCAGATTaGCCGCCTGCCTTGGCACCG +
Preference number: 5 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYGAEAD*PPALAP
Trigger: CGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCACC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGAATTGTCTGCACTGCATaGTTCAGCCAGGTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGIVCTA*FSQVGK
Trigger: CTTGCCAACCTGGCTGAACAATGCAGTGCAGACAAT...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 90 bp TGGACATTGTCTCTTCCAAGTTCTGCCTCAGATCTGCTATGTTCTTaGCTGTGCGCATTCTCCGAGCTTCAGGGTCCTCCCCAGATATCT +
Preference number: 5 (lower is better)
Translates to: WTLSLPSSASDLLCS*LCAFSELQGPPQIS
Trigger: AGATATCTGGGGAGGACCCTGAAGCTCGGAGAATGCGCACAGTCAAGAACATAGCAGATCTGAGGCAGAACTTGGAAGAGACAATGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS TCA 90 bp TGGACATTGTCTCTTCCAAGTTCTGCCTCAGATCTGCTATGTTCTTaGCTGTGCGCATTCTCCGAGCTTCAGGGTCCTCCCCTAGTAAGT +
Preference number: 5 (lower is better)
Translates to: WTLSLPSSASDLLCS*LCAFSELQGPPLVS
Trigger: ACTTACTAGGGGAGGACCCTGAAGCTCGGAGAATGCGCACAGTCAAGAACATAGCAGATCTGAGGCAGAACTTGGAAGAGACAATGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CAA 90 bp TGTCAGTTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGCTGGTAATACTGCTGTaGATGATGCTGCTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: CQFQPNSATSVDTTTLGQLVILL*MMLLLL
Trigger: AAGCAACAGCAGCATCATCAACAGCAGTATTACCAG...CTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAACTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCGGGCATTAACCAGCTaGAATTTTTCAAGCATAGAT +
Preference number: 5 (lower is better)
Translates to: QRKFHGSEGSCLRRAASARALTS*NFSSID
Trigger: ATCTATGCTTGAAAAATTCAAGCTGGTTAATGCCCG...GGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GCCCGCCACGAGATATGTACGTTCAGGCAGTTACTCATCCAAAATTGTACCGGCAATTTAGGTGACACTTaGGGGCTGCTGTTTGTCGAG +
Preference number: 5 (lower is better)
Translates to: ARHEICTFRQLLIQNCTGNLGDT*GLLFVE
Trigger: CTCGACAAACAGCAGCCCCAAAGTGTCACCTAAATT...GCCGGTACAATTTTGGATGAGTAACTGCCTGAACGTACATATCTCGTGGCGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATTATTGCTGAAATTTTaGCTTCCCGCTTTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: SRQGASAGETPLNTNRIKLLLKF*LPAFGG
Trigger: CCCTCCGAAAGCGGGAAGCAAAAATTTCAGCAATAA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGGTCGGCTTGTCAGGTaGGGGATGGCCCTTCCATTC +
Preference number: 5 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVGRLVR*GMALPF
Trigger: GAATGGAAGGGCCATCCCCAACCTGACAAGCCGACC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGACATCCAGGTCACTGCTaGCTTTCTCGCTCATATCTA +
Preference number: 5 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGHPGHC*LSRSYL
Trigger: TAGATATGAGCGAGAAAGCAAGCAGTGACCTGGATG...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGACTTCTGGTATATAGGTaGAGCCCACCATCTGTCATG +
Preference number: 5 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGLLVYR*SPPSVM
Trigger: CATGACAGATGGTGGGCTCAACCTATATACCAGAAG...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATGCAAGGATGATCCTTaGAGAGGAGTTTTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: SRQGASAGETPLNTNRIKCKDDP*RGVFPF
Trigger: GAAAGGGAAAACTCCTCTCAAAGGATCATCCTTGCA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTGGCTGTCTGAGCCCTaGAGTCCCACAGGCACTGGC +
Preference number: 5 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVWLSEP*SPTGTG
Trigger: GCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCCA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATTCTGTGATGTTCAGGTaGTTGAGTGAAAGCCCTAAG +
Preference number: 5 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDSVMFR*LSESPK
Trigger: CTTAGGGCTTTCACTCAACAACCTGAACATCACAGA...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAACATCCTTATGTCCTGTaGCATCACCAGTGTCATCTA +
Preference number: 5 (lower is better)
Translates to: SRQGASAGETPLNTNRIKHPYVL*HHQCHL
Trigger: TAGATGACACTGGTGATGCAACAGGACATAAGGATG...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCAACCTAATTCTGCTACCTCCGTGGACACCACAACTCTGGGCCAGGGCCCTAGTTCCTTACTTGACTaGTGGTCCACATTAAAGGTA +
Preference number: 5 (lower is better)
Translates to: FQPNSATSVDTTTLGQGPSSLLD*WSTLKV
Trigger: TACCTTTAATGTGGACCACAAGTCAAGTAAGGAACT...AGGGCCCTGGCCCAGAGTTGTGGTGTCCACGGAGGTAGCAGAATTAGGTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ATTCTGTGTGCCTCAGCTCAGTCTGGTATCCCTCGGGGCAGTAGCACCGTGAAAGATGTAGTTCTAAATTaGGTGATGAGGAGACTCCCT +
Preference number: 5 (lower is better)
Translates to: ILCASAQSGIPRGSSTVKDVVLN*VMRRLP
Trigger: AGGGAGTCTCCTCATCACCAAATTTAGAACTACATC...TTTCACGGTGCTACTGCCCCGAGGGATACCAGACTGAGCTGAGGCACACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 90 bp AATTTCTCAGACTCTTTACTTGCTGCGCTGCCAGGTGAAATAGTTTaGTTTGGCGTGGGCACCTTTGAGCCTGGCTTTGGAATTCCACTG +
Preference number: 5 (lower is better)
Translates to: NFSDSLLAALPGEIV*FGVGTFEPGFGIPL
Trigger: CAGTGGAATTCCAAAGCCAGGCTCAAAGGTGCCCACGCCAAAGCAAACTATTTCACCTGGCAGCGCAGCAAGTAAAGAGTCTGAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 90 bp GAGACACCTTCTTTCTGCATAGTTGGATTCTCTCTGGCTAGCCTTTaGAGCGTTTCCAAACCAGTTGGAAATGCGCACAGTAGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: ETPSFCIVGFSLASL*SVSKPVGNAHSRSP
Trigger: AGGAGACCTACTGTGCGCATTTCCAACTGGTTTGGAAACGCTGCAAAGGCTAGCCAGAGAGAATCCAACTATGCAGAAAGAAGGTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CCA 90 bp ACAGACTCTGTGATGTTCAGGTTGTTGAGTGAAAGCCCTAAGGACTaGCGTGAAGAAGAAGAAGAGGCTGTGCTTGAGGAATCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: TDSVMFRLLSESPKD*REEEEEAVLEESEG
Trigger: CCCTTCTGATTCCTCAAGCACAGCCTCTTCTTCTTCTTCACGCCAGTCCTTAGGGCTTTCACTCAACAACCTGAACATCACAGAGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp GGAGCTCTACCCCATTATTGTCTGCACTGCATTGTTCAGCCAGGTTaGCAAGATACTGCTGCAGTTCCTTACTTGACTTGTGGTCCACAT +
Preference number: 5 (lower is better)
Translates to: GALPHYCLHCIVQPG*QDTAAVPYLTCGPH
Trigger: ATGTGGACCACAAGTCAAGTAAGGAACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATGCAGTGCAGACAATAATGGGGTAGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp TTTCCCCTTCCTCTTCAGCCCAACTTCGGCTTGTACTGCTTGGCTTaGAGGAGCCGTTTTCATCTTCAGACTTACTGTCTTCATCACTCT +
Preference number: 5 (lower is better)
Translates to: FPLPLQPNFGLYCLA*RSRFHLQTYCLHHS
Trigger: AGAGTGATGAAGACAGTAAGTCTGAAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTGAAGAGGAAGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS-3UTR CAA 90 bp AGCAGACAGGGAGCCTCAGCAGGCGAGACGCCTCTTAACACCAACAGGATAAAATTCCATTCACTTCAGTaGTCACAGTCGTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: SRQGASAGETPLNTNRIKFHSLQ*SQSYQR
Trigger: CCTTTGATACGACTGTGACAACTGAAGTGAATGGAA...TTTTATCCTGTTGGTGTTAAGAGGCGTCTCGCCTGCTGAGGCTCCCTGTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACACAGGACAACATCATCTaGATTCTGGGACCCGTCCAG +
Preference number: 5 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTQDNII*ILGPVQ
Trigger: CTGGACGGGTCCCAGAATCAAGATGATGTTGTCCTG...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGTCGGTTCTCTCAGTTaGGAGGTGGTGGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVVGSLS*EVVAPA
Trigger: AGCTGGGGCCACCACCTCCAAACTGAGAGAACCGAC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TGGATCAGAAGGATCCTGCCTGAGAAGGGCAGCCTCCGCCCCGAGGAAACAAAATATCTTAGTCCCTTTTaGGGTAGTGTATTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: WIRRILPEKGSLRPEETKYLSPF*GSVFLS
Trigger: TGACAGAAATACACTACCCAAAAAGGGACTAAGATA...TTTTGTTTCCTCGGGGCGGAGGCTGCCCTTCTCAGGCAGGATCCTTCTGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGTGATGTTCAGGTTGTaGAGTGAAAGCCCTAAGGAC +
Preference number: 5 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSVMFRL*SESPKD
Trigger: GTCCTTAGGGCTTTCACTCAACAACCTGAACATCAC...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATGATGTAGTTCTAAATTaGGTGATGAGGAGACTCCCT +
Preference number: 5 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDDVVLN*VMRRLP
Trigger: AGGGAGTCTCCTCATCACCAAATTTAGAACTACATC...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp ATATCTGTTAATTTTAATTCCTTCTCTCTGAGCTCGCTCTTCAGCTaGAGAATGATCTCGGCCTCAGCCTCAGTGCACTCGCAGATCGCT +
Preference number: 5 (lower is better)
Translates to: ISVNFNSFSLSSLFS*RMISASASVHSQIA
Trigger: AGCGATCTGCGAGTGCACTGAGGCTGAGGCCGAGATCATTCTGCAGCTGAAGAGCGAGCTCAGAGAGAAGGAATTAAAATTAACAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp CTGGCTTTGGAATTCCACTGGACGATGGAATTAAGCTTTCTTTCTTaGCCGCTGCAGTCTTGCTGCCCTTTGGGATCAAGCTTGCAATTT +
Preference number: 5 (lower is better)
Translates to: LALEFHWTMELSFLS*PLQSCCPLGSSLQF
Trigger: AAATTGCAAGCTTGATCCCAAAGGGCAGCAAGACTGCAGCGGCCAAGAAAGAAAGCTTAATTCCATCGTCCAGTGGAATTCCAAAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACCAGCGTGAACAGGCTTaGGCCCAACAGCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYQREQA*AQQLAV
Trigger: GACAGCCAGCTGTTGGGCCAAAGCCTGTTCACGCTG...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS-3UTR CAA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTATTGACATTCATGGACTaGCTGCGCCAGGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVLTFMD*LRQGLL
Trigger: CAGCAAGCCCTGGCGCAGCAAGTCCATGAATGTCAA...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTGAGGGATTCCATTCACTTCAGTaGTCACAGTCGTATCAAAGG +
Preference number: 5 (lower is better)
Translates to: FLLCLWRTGLVGSFCSEGFHSLQ*SQSYQR
Trigger: CCTTTGATACGACTGTGACAACTGAAGTGAATGGAA...TCCCTCACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ACTCTGGTTCAGGGAGTTGGCAGGTGGTTTGAAAAGACCACTGTGGTAAAAACAGCAATATCTGGATATTaGGACCCTGGCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: TLVQGVGRWFEKTTVVKTAISGY*DPGCLS
Trigger: GCTCAGACAGCCAGGGTCCAAATATCCAGATATTGC...TGTTTTTACCACAGTGGTCTTTTCAAACCACCTGCCAACTCCCTGAACCAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TCTACTGGGGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCCAAGTTAAAGTACCTTaGGGTAATTGGCTTAGGAAT +
Preference number: 5 (lower is better)
Translates to: STGALSPAPCGTKEVPWIQVKVP*GNWLRN
Trigger: ATTCCTAAGCCAATTACCCAAAGGTACTTTAACTTG...GATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCCCCAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 90 bp GGGTTGCCCAGAAGTGCTGGGAGGCTGTGTGTTTCCATTTATACCTaGAGATGGTTGAGGTCCTTTGGGGGAATCTTTTTCATTTCCATT +
Preference number: 5 (lower is better)
Translates to: GLPRSAGRLCVSIYT*RWLRSFGGIFFISI
Trigger: AATGGAAATGAAAAAGATTCCCCCAAAGGACCTCAACCATCTTCAGGTATAAATGGAAACACACAGCCTCCCAGCACTTCTGGGCAACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 90 bp ATTGTCCAGAATTATGACAACAGGGAGCTCTACCCCATTATTGTCTaGACTGCATTGTTCAGCCAGGTTGGCAAGATACTGCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: IVQNYDNRELYPIIV*TALFSQVGKILLQF
Trigger: GAACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATGCAGTGCAGACAATAATGGGGTAGAGCTCCCTGTTGTCATAATTCTGGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp AGCTTCATTAGCATATTCATCAAGGGGTCCCCTTCTGTATCAGTCTaGGGAATGTGCTTTGACGTTGTGGCTTCCTTTGTAGATGTGCAG +
Preference number: 5 (lower is better)
Translates to: SFISIFIKGSPSVSV*GMCFDVVASFVDVQ
Trigger: CTGCACATCTACAAAGGAAGCCACAACGTCAAAGCACATTCCCCAGACTGATACAGAAGGGGACCCCTTGATGAATATGCTAATGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAACTGGACTGCATATCTaGCTGGGTTTTGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVTGLHI*LGFGLA
Trigger: AGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGT...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGAGGTGGCACTGTGCTaGACATTCATGGACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVEVALC*TFMDLL
Trigger: CAGCAAGTCCATGAATGTCAAGCACAGTGCCACCTC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGAGAAGTGGCTGGGCTaGGCTGCTTCACTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYEKWLG*AASLSA
Trigger: TGCTGACAGTGAAGCAGCCAAGCCCAGCCACTTCTC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGAGGAACTGCTCAGATaGGCAGCCCACACAAGCCCA +
Preference number: 5 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYEELLR*AAHTSP
Trigger: TGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCTC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCGATCGCAGCCACTCTTaGCCTTCTTCTTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: TYPVDCANLTFLYSISTSDRSHS*PSSWLA
Trigger: GGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATC...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGGATCGCAGCCACTCTTaGCCTTCTTCTTGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVDRSHS*PSSWLA
Trigger: GGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATC...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGTGCGAGGAAGGCGGCTaGGTGGACTTTTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVCEEGG*VDFFLP
Trigger: TGGCAAGAAAAAGTCCACCAAGCCGCCTTCCTCGCA...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GGCCCTGTCACCAGCACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCAAGTTAAAGTACCTTaGGGTAATTGGCTTAGGAAT +
Preference number: 5 (lower is better)
Translates to: GPVTSTMWHKGSSMDQKDQVKVP*GNWLRN
Trigger: ATTCCTAAGCCAATTACCCAAAGGTACTTTAACTTG...ATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTGCTGGTGACAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGATTGTCTGCACTGCATaGTTCAGCCAGGTTGGCAAG +
Preference number: 5 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVIVCTA*FSQVGK
Trigger: CTTGCCAACCTGGCTGAACAATGCAGTGCAGACAAT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 90 bp ATCCCATTTAGTTTTTCCACTAACACCAATGGATCCTATCAAATATaGCTGAGACTTCTGGTCCTTGGCTCGACCGTAGCCCTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: IPFSFSTNTNGSYQI*LRLLVLGSTVALAD
Trigger: ATCAGCAAGGGCTACGGTCGAGCCAAGGACCAGAAGTCTCAGGCATATTTGATAGGATCCATTGGTGTTAGTGGAAAAACTAAATGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 90 bp TTCTTTTTCTTGGAGTCAGCATCATTACCACTGCCAATGCTGGAATaGCTCGTTGCGCTGTTGATACTAGAAACACTTTCAGAGGAGTGC +
Preference number: 5 (lower is better)
Translates to: FFFLESASLPLPMLE*LVALLILETLSEEC
Trigger: GCACTCCTCTGAAAGTGTTTCTAGTATCAACAGCGCAACGAGCCATTCCAGCATTGGCAGTGGTAATGATGCTGACTCCAAGAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CACCATGTGGCACAAAGGAAGTTCCATGGATCAGAAGGATCCTGCCTGAGAAGGTTTCCTCTTTTTCTTTaGGCTGCAGCAAAGACTTTT +
Preference number: 5 (lower is better)
Translates to: HHVAQRKFHGSEGSCLRRFPLFL*AAAKTF
Trigger: AAAAGTCTTTGCTGCAGCCAAAAGAAAAAGAGGAAA...CCTTCTCAGGCAGGATCCTTCTGATCCATGGAACTTCCTTTGTGCCACATGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CACAATAGGTTTGATCCACAGTTGAGGTTCCAAAGTCAGGGTGACAATTCTGTGAGGAAGAATCCATCTTaGTGGGACTGGTACAGGAGT +
Preference number: 5 (lower is better)
Translates to: HNRFDPQLRFQSQGDNSVRKNPS*WDWYRS
Trigger: ACTCCTGTACCAGTCCCACAAAGATGGATTCTTCCT...CACAGAATTGTCACCCTGACTTTGGAACCTCAACTGTGGATCAAACCTATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACCAGTCGTATCAAAGGTaGTCTCCAGGGTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYQSYQR*SPGCCG
Trigger: GCCACAGCACCCTGGAGACAACCTTTGATACGACTG...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp AGCAATGGAGCCGTTGCGAACTCCATGGTTATAAAAATGCCTGGGAATAAAGTAGCAATATCTGGATATTaGGACCCTGGCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: SNGAVANSMVIKMPGNKVAISGY*DPGCLS
Trigger: GCTCAGACAGCCAGGGTCCAAATATCCAGATATTGC...TACTTTATTCCCAGGCATTTTTATAACCATGGAGTTCGCAACGGCTCCATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 90 bp AGATGTCACTCAAAGAGCCCACATGGTGAAGATTGTCCAGAATTATaGCAACAGGGAGCTCTACCCCATTATTGTCTGCACTGCATTGTT +
Preference number: 5 (lower is better)
Translates to: RCHSKSPHGEDCPEL*QQGALPHYCLHCIV
Trigger: AACAATGCAGTGCAGACAATAATGGGGTAGAGCTCCCTGTTGTCATAATTCTGGACAATCTTCACCATGTGGGCTCTTTGAGTGACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 90 bp TCATGTATCCACCAACATCCACTTCAGAAGACACATCCAGGTCACTaGTTGCTTTCTCGCTCATATCTATTTGTGACATGTTTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: SCIHQHPLQKTHPGH*LLSRSYLFVTCFPD
Trigger: GTCTGGGAAACATGTCACAAATAGATATGAGCGAGAAAGCAAGCAGTGACCTGGATGTGTCTTCTGAAGTGGATGTTGGTGGATACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp GCACAATTCCTTTTGTGCTTATGGAGGACTGGCCTCGTGGGTTCATTCTGCAGTCAAGTTAAAGTACCTTaGGGTAATTGGCTTAGGAAT +
Preference number: 5 (lower is better)
Translates to: AQFLLCLWRTGLVGSFCSQVKVP*GNWLRN
Trigger: ATTCCTAAGCCAATTACCCAAAGGTACTTTAACTTG...ACTGCAGAATGAACCCACGAGGCCAGTCCTCCATAAGCACAAAAGGAATTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTCTCAGACTCTTTACTaGCTGCGCTGCCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYSQTLY*LRCQVK
Trigger: TTTCACCTGGCAGCGCAGCAAGTAAAGAGTCTGAGA...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGAGATCTGCTATGTTCTaGACTGTGCGCATTCTCCGA +
Preference number: 5 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVRSAMF*TVRILR
Trigger: TCGGAGAATGCGCACAGTCAAGAACATAGCAGATCT...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCCATCCAGGTCACTGCTaGCTTTCTCGCTCATATCTA +
Preference number: 5 (lower is better)
Translates to: TYPVDCANLTFLYSISTSHPGHC*LSRSYL
Trigger: TAGATATGAGCGAGAAAGCAAGCAGTGACCTGGATG...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACGTTTTCCTTCCTGCATaGGACTTCCCACCAATGGCA +
Preference number: 5 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYVFLPA*DFPPMA
Trigger: TGCCATTGGTGGGAAGTCCAATGCAGGAAGGAAAAC...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ATCTGCACCAGATACCTCTCATTGCTAATTTTGCTCTACGGAAACCAACCCAAACATCCTTATGTCCTGTaGCATCACCAGTGTCATCTA +
Preference number: 5 (lower is better)
Translates to: ICTRYLSLLILLYGNQPKHPYVL*HHQCHL
Trigger: TAGATGACACTGGTGATGCAACAGGACATAAGGATG...TTTGGGTTGGTTTCCGTAGAGCAAAATTAGCAATGAGAGGTATCTGGTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp CAATACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACCATTGTTCAGCCAGGTaGGCAAGATACTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: QYLPSRLCKSNLLVQYKYHCSAR*ARYCCS
Trigger: ACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATG...GTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 90 bp TATTCCTCTCAATTTCCATCTCTATCAGTTTCCTGCGAAGATACCTaGCTAAAAAGCCTTTCACGGGTTCCGTGTGGTTTGCACATAATA +
Preference number: 5 (lower is better)
Translates to: YSSQFPSLSVSCEDT*LKSLSRVPCGLHII
Trigger: TATTATGTGCAAACCACACGGAACCCGTGAAAGGCTTTTTAGGCAGGTATCTTCGCAGGAAACTGATAGAGATGGAAATTGAGAGGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp TTAGTGTTGAAACGAACTGTTGAAACTGTTGGAGAAGTCTGGTTTAAGGCAGTGCTGGTAATACTGCTGTaGATGATGCTGCTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: LVLKRTVETVGEVWFKAVLVILL*MMLLLL
Trigger: AAGCAACAGCAGCATCATCAACAGCAGTATTACCAG...CACTGCCTTAAACCAGACTTCTCCAACAGTTTCAACAGTTCGTTTCAACACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCCGGGCATTAACCAGCTaGAATTTTTCAAGCATAGAT +
Preference number: 5 (lower is better)
Translates to: TYPVDCANLTFLYSISTSRALTS*NFSSID
Trigger: ATCTATGCTTGAAAAATTCAAGCTGGTTAATGCCCG...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp GAGAGGATAATTCTGTGGTGCTCCATCAACAAGTTAAAGTACCTTTaGGTAATTGGCTTAGGAATCAGTGTATCAAAAACAAAACTGTCC +
Preference number: 5 (lower is better)
Translates to: ERIILWCSINKLKYL*VIGLGISVSKTKLS
Trigger: GGACAGTTTTGTTTTTGATACACTGATTCCTAAGCCAATTACCCAAAGGTACTTTAACTTGTTGATGGAGCACCACAGAATTATCCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS-3UTR CAA 90 bp ACCTACCCAGTAGACTGTGCAAATCTAACCTTCTTGTACAGTATAAGTACTTCCTATCTTAGTCCCTTTTaGGGTAGTGTATTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: TYPVDCANLTFLYSISTSYLSPF*GSVFLS
Trigger: TGACAGAAATACACTACCCAAAAAGGGACTAAGATA...GGAAGTACTTATACTGTACAAGAAGGTTAGATTTGCACAGTCTACTGGGTAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 90 bp AATTCTGTGGTGCTCCATCAACAAGTTAAAGTACCTTTGGGTAATTaGCTTAGGAATCAGTGTATCAAAAACAAAACTGTCCAAACTATT +
Preference number: 5 (lower is better)
Translates to: NSVVLHQQVKVPLGN*LRNQCIKNKTVQTI
Trigger: AATAGTTTGGACAGTTTTGTTTTTGATACACTGATTCCTAAGCCAATTACCCAAAGGTACTTTAACTTGTTGATGGAGCACCACAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp GCGCCAGGGCTTGCTGGCACTCGGGGAAGGGATGGCTaGGGCTGGGGGTTGCCCAGAAGTGCTGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: APGLAGTRGRDG*GWGLPRSAGRL
Trigger: CAGCCTCCCAGCACTTCTGGGCAACCCCCAGCCTCAGCCATCCCTTCCCCGAGTGCCAGCAAGCCCTGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 72 bp CCGCCCATCCAGAGGGGTAGAGAGGCTGGGCGTGCTTaGTTTCTCCGCTGTGATGGCCTTTGGGAAGGCCTG +
Preference number: 6 (lower is better)
Translates to: PPIQRGREAGRA*FLRCDGLWEGL
Trigger: CAGGCCTTCCCAAAGGCCATCACAGCGGAGAAAGCAAGCACGCCCAGCCTCTCTACCCCTCTGGATGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp GGAGGCTCCCTGAGCCTTGTTGCTGCTGCTCGCAGCTaGCACCCTAGAGGGCCCTGGAAGCCTAGTAGGCTT +
Preference number: 6 (lower is better)
Translates to: GGSLSLVAAARS*HPRGPWKPSRL
Trigger: AAGCCTACTAGGCTTCCAGGGCCCTCTAGGGTGCCAGCTGCGAGCAGCAGCAACAAGGCTCAGGGAGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp GTAGACGAGGGCACGCTTGACCCAGTCTCCAGGTCATaGGGGAAGGTCGGCTTGTCAGGTTGGGGATGGCCC +
Preference number: 6 (lower is better)
Translates to: VDEGTLDPVSRS*GKVGLSGWGWP
Trigger: GGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCATGACCTGGAGACTGGGTCAAGCGTGCCCTCGTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp ACTGCTGTGTGTGACCTGCATAACACAGGAGCTGGAGGGAGACGCTaGCCCAGCTTCCCGCCCATCCAGAGGGGTAGAGAGGCTGGGCGT +
Preference number: 6 (lower is better)
Translates to: TAVCDLHNTGAGGRR*PSFPPIQRGREAGR
Trigger: ACGCCCAGCCTCTCTACCCCTCTGGATGGGCGGGAAGCTGGGCAAGCGTCTCCCTCCAGCTCCTGTGTTATGCAGGTCACACACAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 72 bp GTGACCTGCATAACACAGGAGCTGGAGGGAGACGCTTaGCCAGCTTCCCGCCCATCCAGAGGGGTAGAGAGG +
Preference number: 6 (lower is better)
Translates to: VTCITQELEGDA*PASRPSRGVER
Trigger: CCTCTCTACCCCTCTGGATGGGCGGGAAGCTGGGCAAGCGTCTCCCTCCAGCTCCTGTGTTATGCAGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CAA 90 bp GTGGCTGACGATGACATGGCAGAAGGGGAGACCAAGGGAGACTGGTaGCCAGTATCCTGCAGCCCGCCAGTGGAATGCGATCGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VADDDMAEGETKGDW*PVSCSPPVECDRSH
Trigger: GTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCCCTTCTGCCATGTCATCGTCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp GCTGACTGCGAGGGCTTCATGGATGAAGAGCCACTCTCGCCAGCATaGTGGGGTAGCTTGGGGGAGGCTGGCAGGGATGAGTCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: ADCEGFMDEEPLSPA*WGSLGEAGRDESVS
Trigger: GCTGACAGACTCATCCCTGCCAGCCTCCCCCAAGCTACCCCACAATGCTGGCGAGAGTGGCTCTTCATCCATGAAGCCCTCGCAGTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp GCAGCCCGCCAGTGGAATGCGATCGCAGCCACTCTTTaGCTTCTTCTTGGTTGGCCTGCCGAGATGATGGGG +
Preference number: 6 (lower is better)
Translates to: AARQWNAIAATL*LLLGWPAEMMG
Trigger: CCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp GAAGGGGAGACCAAGGGAGACTGGTTGCCAGTATCCTaGAGCCCGCCAGTGGAATGCGATCGCAGCCACTCT +
Preference number: 6 (lower is better)
Translates to: EGETKGDWLPVS*SPPVECDRSHS
Trigger: AGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp TGTGACCTGCATAACACAGGAGCTGGAGGGAGACGCTaGCCCAGCTTCCCGCCCATCCAGAGGGGTAGAGAG +
Preference number: 6 (lower is better)
Translates to: CDLHNTGAGGRR*PSFPPIQRGRE
Trigger: CTCTCTACCCCTCTGGATGGGCGGGAAGCTGGGCAAGCGTCTCCCTCCAGCTCCTGTGTTATGCAGGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS TCA 72 bp TGCTCAGATTGGCAGCCCACACAAGCCCACCGGATGTaGAAGAGTGAACCGACGCTGGGCTGGAAGCCAAGG +
Preference number: 6 (lower is better)
Translates to: CSDWQPTQAHRM*KSEPTLGWKPR
Trigger: CCTTGGCTTCCAGCCCAGCGTCGGTTCACTCTTTCACATCCGGTGGGCTTGTGTGGGCTGCCAATCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp TCTTTGGGAGGGTGGTCTGGGCCATTCAGTGCTCCCTaGATGGCTGCTTGGGCAGCAGAGTTCTGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SLGGWSGPFSAP*MAAWAAEFWAF
Trigger: GAAGGCCCAGAACTCTGCTGCCCAAGCAGCCATTCAGGGAGCACTGAATGGCCCAGACCACCCTCCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp GGTAACTTGGAGTGTCCTTGCTGCCGGCAGAGGAACTaGTCAGATTGGCAGCCCACACAAGCCCACCGGATG +
Preference number: 6 (lower is better)
Translates to: GNLECPCCRQRN*SDWQPTQAHRM
Trigger: CATCCGGTGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCTCTGCCGGCAGCAAGGACACTCCAAGTTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp CTGGGCGGGGATACTGCTGGAGCGCATCATACTGGGTaGAGGCAGGTTAAACTGGGAGAGGTTGGTGGGACT +
Preference number: 6 (lower is better)
Translates to: LGGDTAGAHHTG*RQVKLGEVGGT
Trigger: AGTCCCACCAACCTCTCCCAGTTTAACCTGCCTGCACCCAGTATGATGCGCTCCAGCAGTATCCCCGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp GCGGAGATCTTTGGGAGGGTGGTCTGGGCCATTCAGTaGTCCCTGAATGGCTGCTTGGGCAGCAGAGTTCTG +
Preference number: 6 (lower is better)
Translates to: AEIFGRVVWAIQ*SLNGCLGSRVL
Trigger: CAGAACTCTGCTGCCCAAGCAGCCATTCAGGGAGCACTGAATGGCCCAGACCACCCTCCCAAAGATCTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp GACGATGACATGGCAGAAGGGGAGACCAAGGGAGACTaGTTGCCAGTATCCTGCAGCCCGCCAGTGGAATGC +
Preference number: 6 (lower is better)
Translates to: DDDMAEGETKGD*LPVSCSPPVEC
Trigger: GCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCCCTTCTGCCATGTCATCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GAGCGCCCTGAGCCGATCTTAGTCGGTTCTCTCAGTTaGGAGGTGGTGGCCCCAGCTGACTTGCTGCTGACA +
Preference number: 6 (lower is better)
Translates to: ERPEPILVGSLS*EVVAPADLLLT
Trigger: TGTCAGCAGCAAGTCAGCTGGGGCCACCACCTCCAAACTGAGAGAACCGACTAAGATCGGCTCAGGGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GGAGTGTCCTTGCTGCCGGCAGAGGAACTGCTCAGATaGGCAGCCCACACAAGCCCACCGGATGTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: GVSLLPAEELLR*AAHTSPPDVKE
Trigger: CTCTTTCACATCCGGTGGGCTTGTGTGGGCTGCCAATCTGAGCAGTTCCTCTGCCGGCAGCAAGGACACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp TGCAGCCCGCCAGTGGAATGCGATCGCAGCCACTCTTaGCCTTCTTCTTGGTTGGCCTGCCGAGATGATGGG +
Preference number: 6 (lower is better)
Translates to: CSPPVECDRSHS*PSSWLACRDDG
Trigger: CCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp GAGGGCACGCTTGACCCAGTCTCCAGGTCATGGGGGAAGGTCGGCTaGTCAGGTTGGGGATGGCCCTTCCATTCACTTCAGTTGTCACAG +
Preference number: 6 (lower is better)
Translates to: EGTLDPVSRSWGKVG*SGWGWPFHSLQLSQ
Trigger: CTGTGACAACTGAAGTGAATGGAAGGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCATGACCTGGAGACTGGGTCAAGCGTGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp ACTGAGGAGGACTTCGCCCCCTCAGTATTAGGTGCGGAGGCAGATTaGCCGCCTGCCTTGGCACCGAACAACCTTCGAAATGTGGGCGAG +
Preference number: 6 (lower is better)
Translates to: TEEDFAPSVLGAEAD*PPALAPNNLRNVGE
Trigger: CTCGCCCACATTTCGAAGGTTGTTCGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCACCTAATACTGAGGGGGCGAAGTCCTCCTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp GCGAGGCAATATCTGGATATTTGGACCCTGGCTGTCTaGGCCCTTGAGTCCCACAGGCACTGGCAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: ARQYLDIWTLAV*ALESHRHWQRW
Trigger: CCACCTCTGCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCAAATATCCAGATATTGCCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp TGCCTGTGGTCAGTCCAGACAGGGAGCCATGATGGCTaGGGGGCAGGTCAATGGACTCAGAGCTCGTATGGA +
Preference number: 6 (lower is better)
Translates to: CLWSVQTGSHDG*GAGQWTQSSYG
Trigger: TCCATACGAGCTCTGAGTCCATTGACCTGCCCCTCAGCCATCATGGCTCCCTGTCTGGACTGACCACAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp CCCCTCAGTATTAGGTGCGGAGGCAGATTTGCCGCCTaGCTTGGCACCGAACAACCTTCGAAATGTGGGCGA +
Preference number: 6 (lower is better)
Translates to: PLSIRCGGRFAA*LGTEQPSKCGR
Trigger: TCGCCCACATTTCGAAGGTTGTTCGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCACCTAATACTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp ATGACATGGCAGAAGGGGAGACCAAGGGAGACTGGTTaGCAGTATCCTGCAGCCCGCCAGTGGAATGCGATC +
Preference number: 6 (lower is better)
Translates to: MTWQKGRPRETG*QYPAARQWNAI
Trigger: GATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCCCTTCTGCCATGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp GTGGCTAACGGCCCGTGGCCTTTCCTCCAGGGAAGTTaGACTACCGCAAAGCTGGGCATCATCATAGAGGTC +
Preference number: 6 (lower is better)
Translates to: VANGPWPFLQGS*TTAKLGIIIEV
Trigger: GACCTCTATGATGATGCCCAGCTTTGCGGTAGTGCAACTTCCCTGGAGGAAAGGCCACGGGCCGTTAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp GACTGGACTGCATATCTTGCTGGGTTTTGGCCTGGCTaGCTTCGGACTGAGGGGCGGTATGAGTCACTCGCT +
Preference number: 6 (lower is better)
Translates to: DWTAYLAGFWPG*LRTEGRYESLA
Trigger: AGCGAGTGACTCATACCGCCCCTCAGTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp TGGCTGTCAGACTGGACTGCATATCTTGCTGGGTTTTaGCCTGGCTGGCTTCGGACTGAGGGGCGGTATGAG +
Preference number: 6 (lower is better)
Translates to: WLSDWTAYLAGF*PGWLRTEGRYE
Trigger: CTCATACCGCCCCTCAGTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGTCTGACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp GCTGGGCGTGCTTGCTTTCTCCGCTGTGATGGCCTTTaGGAAGGCCTGAGAAGAGCTTCCCTTGCTAGTCCT +
Preference number: 6 (lower is better)
Translates to: AGRACFLRCDGL*EGLRRASLASP
Trigger: AGGACTAGCAAGGGAAGCTCTTCTCAGGCCTTCCCAAAGGCCATCACAGCGGAGAAAGCAAGCACGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp GTGCTGGACTTAGAAGGGCGGGGCAAACTACGGTACTaGAGGGTGGTCTTCGAGCTCACGTGCAGGACAACA +
Preference number: 6 (lower is better)
Translates to: VLDLEGRGKLRY*RVVFELTCRTT
Trigger: TGTTGTCCTGCACGTGAGCTCGAAGACCACCCTCCAGTACCGTAGTTTGCCCCGCCCTTCTAAGTCCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp ATGAAGAGCCACTCTCGCCAGCATTGTGGGGTAGCTTaGGGGAGGCTGGCAGGGATGAGTCTGTCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: MKSHSRQHCGVA*GRLAGMSLSAL
Trigger: AAGAGCTGACAGACTCATCCCTGCCAGCCTCCCCCAAGCTACCCCACAATGCTGGCGAGAGTGGCTCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GATGACATGGCAGAAGGGGAGACCAAGGGAGACTGGTaGCCAGTATCCTGCAGCCCGCCAGTGGAATGCGAT +
Preference number: 6 (lower is better)
Translates to: DDMAEGETKGDW*PVSCSPPVECD
Trigger: ATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCTTGGTCTCCCCTTCTGCCATGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp GTCTTCTCCGAGTCTTCAGCAAGTCCAGAAGTAGCACCCTTCCACTaGGCGGCTCCGTCACCATGGCTGTCACAATCTCCCTCGGCTTTC +
Preference number: 6 (lower is better)
Translates to: VFSESSASPEVAPFH*AAPSPWLSQSPSAF
Trigger: GAAAGCCGAGGGAGATTGTGACAGCCATGGTGACGGAGCCGCCAAGTGGAAGGGTGCTACTTCTGGACTTGCTGAAGACTCGGAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp ACTGGACTCGAGCGCCCTGAGCCGATCTTAGTCGGTTCTCTCAGTTaGGAGGTGGTGGCCCCAGCTGACTTGCTGCTGACATTGGAATCA +
Preference number: 6 (lower is better)
Translates to: TGLERPEPILVGSLS*EVVAPADLLLTLES
Trigger: TGATTCCAATGTCAGCAGCAAGTCAGCTGGGGCCACCACCTCCAAACTGAGAGAACCGACTAAGATCGGCTCAGGGCGCTCGAGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp CCAGTATCCTGCAGCCCGCCAGTGGAATGCGATCGCAGCCACTCTTaGCCTTCTTCTTGGTTGGCCTGCCGAGATGATGGGGTGTATCTT +
Preference number: 6 (lower is better)
Translates to: PVSCSPPVECDRSHS*PSSWLACRDDGVYL
Trigger: AAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp TTCCCAGGGGTCTTGAGTGCACTTGTGCTGGTTTTCTaGCTAGCTGTAGCTGGAGTTCCTCCCTGGGCAGAC +
Preference number: 6 (lower is better)
Translates to: FPGVLSALVLVF*LAVAGVPPWAD
Trigger: GTCTGCCCAGGGAGGAACTCCAGCTACAGCTAGGCAGAAAACCAGCACAAGTGCACTCAAGACCCCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp GACTGGTTGCCAGTATCCTGCAGCCCGCCAGTGGAATaGGATCGCAGCCACTCTTTGCCTTCTTCTTGGTTG +
Preference number: 6 (lower is better)
Translates to: DWLPVSCSPPVE*DRSHSLPSSWL
Trigger: CAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp GTCTCCAGGTCATGGGGGAAGGTCGGCTTGTCAGGTTaGGGATGGCCCTTCCATTCACTTCAGTTGTCACAG +
Preference number: 6 (lower is better)
Translates to: VSRSWGKVGLSG*GWPFHSLQLSQ
Trigger: CTGTGACAACTGAAGTGAATGGAAGGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCATGACCTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AGGGAGACTGGTTGCCAGTATCCTGCAGCCCGCCAGTaGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: RETGCQYPAARQ*NAIAATLCLLL
Trigger: AAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGGGCTGCAGGATACTGGCAACCAGTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AGCTGGGCCTTCCTGAGGCAAGGATGCAGAACTCCATaGGTACGTGTCAAGGACCCACTTGGAGGGATCTTC +
Preference number: 6 (lower is better)
Translates to: SWAFLRQGCRTP*VRVKDPLGGIF
Trigger: GAAGATCCCTCCAAGTGGGTCCTTGACACGTACCCATGGAGTTCTGCATCCTTGCCTCAGGAAGGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GAGTCTTCAGCAAGTCCAGAAGTAGCACCCTTCCACTaGGCGGCTCCGTCACCATGGCTGTCACAATCTCCC +
Preference number: 6 (lower is better)
Translates to: ESSASPEVAPFH*AAPSPWLSQSP
Trigger: GGGAGATTGTGACAGCCATGGTGACGGAGCCGCCAAGTGGAAGGGTGCTACTTCTGGACTTGCTGAAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GACTTCGCCCCCTCAGTATTAGGTGCGGAGGCAGATTaGCCGCCTGCCTTGGCACCGAACAACCTTCGAAAT +
Preference number: 6 (lower is better)
Translates to: DFAPSVLGAEAD*PPALAPNNLRN
Trigger: ATTTCGAAGGTTGTTCGGTGCCAAGGCAGGCGGCAAATCTGCCTCCGCACCTAATACTGAGGGGGCGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp CTGCGTCCACTGTCACATCGTGAACGCCTCTCTGTATaGCATCTCTGGAAGTTGCTGTGTCCGGGACTCGGT +
Preference number: 6 (lower is better)
Translates to: LRPLSHRERLSV*HLWKLLCPGLG
Trigger: ACCGAGTCCCGGACACAGCAACTTCCAGAGATGTCATACAGAGAGGCGTTCACGATGTGACAGTGGACGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp TCTTCTGGCCGCAACTGCAGTAAAGCTGGGCCTTCCTaGGGCAAGGATGCAGAACTCCATGGGTACGTGTCA +
Preference number: 6 (lower is better)
Translates to: SSGRNCSKAGPS*GKDAELHGYVS
Trigger: TGACACGTACCCATGGAGTTCTGCATCCTTGCCTCAGGAAGGCCCAGCTTTACTGCAGTTGCGGCCAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AAATGTGGGCGAGGCAATATCTGGATATTTGGACCCTaGCTGTCTGAGCCCTTGAGTCCCACAGGCACTGGC +
Preference number: 6 (lower is better)
Translates to: KCGRGNIWIFGP*LSEPLSPTGTG
Trigger: GCCAGTGCCTGTGGGACTCAAGGGCTCAGACAGCCAGGGTCCAAATATCCAGATATTGCCTCGCCCACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp AGCTGCATATCTGGCTGTCAGACTGGACTGCATATCTaGCTGGGTTTTGGCCTGGCTGGCTTCGGACTGAGG +
Preference number: 6 (lower is better)
Translates to: SCISGCQTGLHI*LGFGLAGFGLR
Trigger: CCTCAGTCCGAAGCCAGCCAGGCCAAAACCCAGCAAGATATGCAGTCCAGTCTGACAGCCAGATATGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CAA 72 bp AGTCTCCAGGTCATGGGGGAAGGTCGGCTTGTCAGGTaGGGGATGGCCCTTCCATTCACTTCAGTTGTCACA +
Preference number: 6 (lower is better)
Translates to: SLQVMGEGRLVR*GMALPFTSVVT
Trigger: TGTGACAACTGAAGTGAATGGAAGGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCATGACCTGGAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GGTGGTCTTCGAGCTCACGTGCAGGACAACATCATCTaGATTCTGGGACCCGTCCAGGCTGGTTTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: GGLRAHVQDNII*ILGPVQAGFPS
Trigger: GGAAGGAAAACCAGCCTGGACGGGTCCCAGAATCAAGATGATGTTGTCCTGCACGTGAGCTCGAAGACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GATGCAGAACTCCATGGGTACGTGTCAAGGACCCACTaGGAGGGATCTTCCCACGGTGCACGTTTCCCATAC +
Preference number: 6 (lower is better)
Translates to: DAELHGYVSRTH*EGSSHGARFPY
Trigger: GTATGGGAAACGTGCACCGTGGGAAGATCCCTCCAAGTGGGTCCTTGACACGTACCCATGGAGTTCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GTCTTCACGGTGGCTGACACTATCGCCGTCACAGCTTaGAGTGCTGGGGTAATTGGCGGCTTCTTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: VFTVADTIAVTA*SAGVIGGFLEL
Trigger: AAGCTCCAAGAAGCCGCCAATTACCCCAGCACTCAAAGCTGTGACGGCGATAGTGTCAGCCACCGTGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp GTACTGGAGGGTGGTCTTCGAGCTCACGTGCAGGACAACATCATCTaGATTCTGGGACCCGTCCAGGCTGGTTTTCCTTCCTGCATTGGA +
Preference number: 6 (lower is better)
Translates to: VLEGGLRAHVQDNII*ILGPVQAGFPSCIG
Trigger: TCCAATGCAGGAAGGAAAACCAGCCTGGACGGGTCCCAGAATCAAGATGATGTTGTCCTGCACGTGAGCTCGAAGACCACCCTCCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp CCGCCAGTGGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTaGGCCTGCCGAGATGATGGGGTGTATCTTAGTCCCTTTTTGGGT +
Preference number: 6 (lower is better)
Translates to: PPVECDRSHSLPSSW*ACRDDGVYLSPFLG
Trigger: ACCCAAAAAGGGACTAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS TCA 72 bp ATTCCAGAGGTCTCGAGGAACAGCGCCGTGACACACTaGTGCCAAGATTCGGTATCGGAAGAGCAGCGTGAA +
Preference number: 6 (lower is better)
Translates to: IPEVSRNSAVTH*CQDSVSEEQRE
Trigger: TTCACGCTGCTCTTCCGATACCGAATCTTGGCATCAGTGTGTCACGGCGCTGTTCCTCGAGACCTCTGGAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS TCA 72 bp GTGGTCTTCGAGCTCACGTGCAGGACAACATCATCTTaGTTCTGGGACCCGTCCAGGCTGGTTTTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: VVFELTCRTTSS*FWDPSRLVFLP
Trigger: AGGAAGGAAAACCAGCCTGGACGGGTCCCAGAATCAAGATGATGTTGTCCTGCACGTGAGCTCGAAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp GTCTGTTTGGTTGACAGTGACTGGACTCGAGCGCCCTaGGCCGATCTTAGTCGGTTCTCTCAGTTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: VCLVDSDWTRAP*ADLSRFSQFGG
Trigger: ACCTCCAAACTGAGAGAACCGACTAAGATCGGCTCAGGGCGCTCGAGTCCAGTCACTGTCAACCAAACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AAGGGATGGCTGAGGCTGGGGGTTGCCCAGAAGTGCTaGGAGGCTGTGTGTTTCCATTTATACCTGAAGATG +
Preference number: 6 (lower is better)
Translates to: KGWLRLGVAQKC*EAVCFHLYLKM
Trigger: CATCTTCAGGTATAAATGGAAACACACAGCCTCCCAGCACTTCTGGGCAACCCCCAGCCTCAGCCATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp CCAGGGTGCTGTGGCTTATCTGGGTCCCTCGAAGACTaGACATTGTCTCTTCCAAGTTCTGCCTCAGATCTG +
Preference number: 6 (lower is better)
Translates to: PGCCGLSGSLED*TLSLPSSASDL
Trigger: CAGATCTGAGGCAGAACTTGGAAGAGACAATGTCCAGTCTTCGAGGGACCCAGATAAGCCACAGCACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AGGTCATGGGGGAAGGTCGGCTTGTCAGGTTGGGGATaGCCCTTCCATTCACTTCAGTTGTCACAGTCGTAT +
Preference number: 6 (lower is better)
Translates to: RSWGKVGLSGWG*PFHSLQLSQSY
Trigger: ATACGACTGTGACAACTGAAGTGAATGGAAGGGCCATCCCCAACCTGACAAGCCGACCTTCCCCCATGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AGAGCTCGTATGGAGACTAGTCATGGACTGGTAACTTaGAGTGTCCTTGCTGCCGGCAGAGGAACTGCTCAG +
Preference number: 6 (lower is better)
Translates to: RARMETSHGLVT*SVLAAGRGTAQ
Trigger: CTGAGCAGTTCCTCTGCCGGCAGCAAGGACACTCCAAGTTACCAGTCCATGACTAGTCTCCATACGAGCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp CTGGAGCGCATCATACTGGGTGCAGGCAGGTTAAACTaGGAGAGGTTGGTGGGACTCACCAAGTTGGAAAAG +
Preference number: 6 (lower is better)
Translates to: LERIILGAGRLN*ERLVGLTKLEK
Trigger: CTTTTCCAACTTGGTGAGTCCCACCAACCTCTCCCAGTTTAACCTGCCTGCACCCAGTATGATGCGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp ATGCAGAACTCCATGGGTACGTGTCAAGGACCCACTTaGAGGGATCTTCCCACGGTGCACGTTTCCCATACA +
Preference number: 6 (lower is better)
Translates to: MQNSMGTCQGPT*RDLPTVHVSHT
Trigger: TGTATGGGAAACGTGCACCGTGGGAAGATCCCTCCAAGTGGGTCCTTGACACGTACCCATGGAGTTCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AGTCACTGTAAAGTGCCTGTTCCAGATCGCCCAGCATaGTCAAGATCACATCCTCATCCAGGTGAGCCGTCC +
Preference number: 6 (lower is better)
Translates to: SHCKVPVPDRPA*SRSHPHPGEPS
Trigger: GGACGGCTCACCTGGATGAGGATGTGATCTTGACCATGCTGGGCGATCTGGAACAGGCACTTTACAGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CAA 72 bp GAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTaGGCCTGCCGAGATGATGGGGTGTATCTTAGTCCC +
Preference number: 6 (lower is better)
Translates to: ECDRSHSLPSSW*ACRDDGVYLSP
Trigger: GGGACTAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CAA 72 bp TCTCTCTGGCTAGCCTTTGCAGCGTTTCCAAACCAGTaGGAAATGCGCACAGTAGGTCTCCTCTCCCCCTCA +
Preference number: 6 (lower is better)
Translates to: SLWLAFAAFPNQ*EMRTVGLLSPS
Trigger: TGAGGGGGAGAGGAGACCTACTGTGCGCATTTCCAACTGGTTTGGAAACGCTGCAAAGGCTAGCCAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CAA 90 bp CTTCCCGTAGGCAGCTTTCCCCTTCCTCTTCAGCCCAACTTCGGCTaGTACTGCTTGGCTTGGAGGAGCCGTTTTCATCTTCAGACTTAC +
Preference number: 6 (lower is better)
Translates to: LPVGSFPLPLQPNFG*YCLAWRSRFHLQTY
Trigger: GTAAGTCTGAAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTGAAGAGGAAGGGGAAAGCTGCCTACGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CAA 90 bp CCGCCAGTGGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTaGGCCTGCCGAGATGATGGGGTGTATCTTTCTGAGAGAGTAGAT +
Preference number: 6 (lower is better)
Translates to: PPVECDRSHSLPSSW*ACRDDGVYLSERVD
Trigger: ATCTACTCTCTCAGAAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCACTGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS TCA 72 bp TGTAGCAAATTCCAGAGGTCTCGAGGAACAGCGCCGTaGCACACTGATGCCAAGATTCGGTATCGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: CSKFQRSRGTAP*HTDAKIRYRKS
Trigger: GCTCTTCCGATACCGAATCTTGGCATCAGTGTGTCACGGCGCTGTTCCTCGAGACCTCTGGAATTTGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS TCA 72 bp CAGGTCACTGCTTGCTTTCTCGCTCATATCTATTTGTaGCATGTTTCCCAGACGCGAGACAGCAGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: QVTACFLAHIYL*HVSQTRDSSSA
Trigger: CGCCGAGCTGCTGTCTCGCGTCTGGGAAACATGTCACAAATAGATATGAGCGAGAAAGCAAGCAGTGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp CTGTCATCCCAGCTGTCTGCGTCCACTGTCACATCGTaGACGCCTCTCTGTATGACATCTCTGGAAGTTGCT +
Preference number: 6 (lower is better)
Translates to: LSSQLSASTVTS*TPLCMTSLEVA
Trigger: AGCAACTTCCAGAGATGTCATACAGAGAGGCGTTCACGATGTGACAGTGGACGCAGACAGCTGGGATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp GACTCTTTACTTGCTGCGCTGCCAGGTGAAATAGTTTaGTTTGGCGTGGGCACCTTTGAGCCTGGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: DSLLAALPGEIV*FGVGTFEPGFG
Trigger: TCCAAAGCCAGGCTCAAAGGTGCCCACGCCAAAGCAAACTATTTCACCTGGCAGCGCAGCAAGTAAAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 72 bp CCCCTACACCACTTGGCTTCTTGTATCCAAAAGAACTaGTGGCTGTCGATCTTCCAATGCCTGACGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PLHHLASCIQKN*WLSIFQCLTVA
Trigger: AGCCACCGTCAGGCATTGGAAGATCGACAGCCAGCAGTTCTTTTGGATACAAGAAGCCAAGTGGTGTAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp GGACAACATCATCTTGATTCTGGGACCCGTCCAGGCTaGTTTTCCTTCCTGCATTGGACTTCCCACCAATGG +
Preference number: 6 (lower is better)
Translates to: GQHHLDSGTRPG*FSFLHWTSHQW
Trigger: CCATTGGTGGGAAGTCCAATGCAGGAAGGAAAACCAGCCTGGACGGGTCCCAGAATCAAGATGATGTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTTaGCCTGCCGAGATGATGGGGTGTATCTTAGTCCCT +
Preference number: 6 (lower is better)
Translates to: NAIAATLCLLLG*PAEMMGCILVP
Trigger: AGGGACTAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp GTGGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTaGTTGGCCTGCCGAGATGATGGGGTGTATCTTAGT +
Preference number: 6 (lower is better)
Translates to: VECDRSHSLPSS*LACRDDGVYLS
Trigger: ACTAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp GTGGAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTaGTTGGCCTGCCGAGATGATGGGGTGTATCTTTCT +
Preference number: 6 (lower is better)
Translates to: VECDRSHSLPSS*LACRDDGVYLS
Trigger: AGAAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CAA 72 bp CAAGATTCGGTATCGGAAGAGCAGCGTGAACAGGCTTaGGCCCAACAGCTGGCTGTCTCAGTTTTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: QDSVSEEQREQA*AQQLAVSVLRQ
Trigger: TTGCCTCAAAACTGAGACAGCCAGCTGTTGGGCCAAAGCCTGTTCACGCTGCTCTTCCGATACCGAATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032719.15
CDS CAA 72 bp CTTCCCGCTTTCGGAGGGGTTAATTTAGGTGACACTTaGGGGCTGCTGTTTGTCGAGCCGCCACTATTCAGA +
Preference number: 6 (lower is better)
Translates to: LPAFGGVNLGDT*GLLFVEPPLFR
Trigger: TCTGAATAGTGGCGGCTCGACAAACAGCAGCCCCAAAGTGTCACCTAAATTAACCCCTCCGAAAGCGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CAA 72 bp GAATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTaGGCCTGCCGAGATGATGGGGTGTATCTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: ECDRSHSLPSSW*ACRDDGVYLSE
Trigger: CTCAGAAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CAA 90 bp AAGGTCGGCTTGTCAGGTTGGGGATGGCCCTTCCATTCACTTCAGTaGTCACAGTCGTATCAAAGGTTGTCTCCAGGGTGCTGTGGCTTA +
Preference number: 6 (lower is better)
Translates to: KVGLSGWGWPFHSLQ*SQSYQRLSPGCCGL
Trigger: TAAGCCACAGCACCCTGGAGACAACCTTTGATACGACTGTGACAACTGAAGTGAATGGAAGGGCCATCCCCAACCTGACAAGCCGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp CCTCGGCTTTCTTCAGCTCCTCAGGACTATCCCAGGTCTCATCTGTaGTCGAACGTTTCTCCGCATCTGTTTTCAGCTGAGTGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: PRLSSAPQDYPRSHL*SNVSPHLFSAECSS
Trigger: GGAAGAACACTCAGCTGAAAACAGATGCGGAGAAACGTTCGACAACAGATGAGACCTGGGATAGTCCTGAGGAGCTGAAGAAAGCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp CCGCTGCTGGTAATCATAGTGGAAGCCCCTACACCACTTGGCTTCTaGTATCCAAAAGAACTGCTGGCTGTCGATCTTCCAATGCCTGAC +
Preference number: 6 (lower is better)
Translates to: PLLVIIVEAPTPLGF*YPKELLAVDLPMPD
Trigger: GTCAGGCATTGGAAGATCGACAGCCAGCAGTTCTTTTGGATACAAGAAGCCAAGTGGTGTAGGGGCTTCCACTATGATTACCAGCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp AAGGAAACGCTCTCTGAATCTGACACTGCTACTTTCTCCTTCTCTTaGTCTGTTTGGTTGACAGTGACTGGACTCGAGCGCCCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: KETLSESDTATFSFS*SVWLTVTGLERPEP
Trigger: CGGCTCAGGGCGCTCGAGTCCAGTCACTGTCAACCAAACAGACAAAGAGAAGGAGAAAGTAGCAGTGTCAGATTCAGAGAGCGTTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp GGCAGCTTTCCCCTTCCTCTTCAGCCCAACTTCGGCTTGTACTGCTaGGCTTGGAGGAGCCGTTTTCATCTTCAGACTTACTGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: GSFPLPLQPNFGLYC*AWRSRFHLQTYCLH
Trigger: ATGAAGACAGTAAGTCTGAAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTGAAGAGGAAGGGGAAAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS GCA 72 bp GATCGCAGCCACTCTTTGCCTTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTGTATCTTAGTCCCTTTTTG +
Preference number: 6 (lower is better)
Translates to: DRSHSLPSSWLA*RDDGVYLSPFL
Trigger: CAAAAAGGGACTAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 72 bp TTTCCCCTTCCTCTTCAGCCCAACTTCGGCTTGTACTaGTTGGCTTGGAGGAGCCGTTTTCATCTTCAGACT +
Preference number: 6 (lower is better)
Translates to: FPLPLQPNFGLY*LAWRSRFHLQT
Trigger: AGTCTGAAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTGAAGAGGAAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS GCA 72 bp GATCGCAGCCACTCTTTGCCTTCTTCTTGGTTGGCCTaGCGAGATGATGGGGTGTATCTTTCTGAGAGAGTA +
Preference number: 6 (lower is better)
Translates to: DRSHSLPSSWLA*RDDGVYLSERV
Trigger: TACTCTCTCAGAAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CCA 72 bp GTATCAAAGGTTGTCTCCAGGGTGCTGTGGCTTATCTaGGTCCCTCGAAGACTGGACATTGTCTCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: VSKVVSRVLWLI*VPRRLDIVSSK
Trigger: CTTGGAAGAGACAATGTCCAGTCTTCGAGGGACCCAGATAAGCCACAGCACCCTGGAGACAACCTTTGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AGAGGCGTGGTATACATAAACCTGGAGGGATCCGTGTaGATGAATCGGCTGGTACCGCTTCGAGAATATCCA +
Preference number: 6 (lower is better)
Translates to: RGVVYINLEGSV*MNRLVPLREYP
Trigger: TGGATATTCTCGAAGCGGTACCAGCCGATTCATCCACACGGATCCCTCCAGGTTTATGTATACCACGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp ACCGAACAACCTTCGAAATGTGGGCGAGGCAATATCTaGATATTTGGACCCTGGCTGTCTGAGCCCTTGAGT +
Preference number: 6 (lower is better)
Translates to: TEQPSKCGRGNI*IFGPWLSEPLS
Trigger: ACTCAAGGGCTCAGACAGCCAGGGTCCAAATATCCAGATATTGCCTCGCCCACATTTCGAAGGTTGTTCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp CCCTTCCTCTTCAGCCCAACTTCGGCTTGTACTGCTTaGCTTGGAGGAGCCGTTTTCATCTTCAGACTTACT +
Preference number: 6 (lower is better)
Translates to: PFLFSPTSACTA*LGGAVFIFRLT
Trigger: AGTAAGTCTGAAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTGAAGAGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CCA 72 bp AATGCGATCGCAGCCACTCTTTGCCTTCTTCTTGGTTaGCCTGCCGAGATGATGGGGTGTATCTTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: NAIAATLCLLLG*PAEMMGCIFLR
Trigger: TCTCAGAAAGATACACCCCATCATCTCGGCAGGCCAACCAAGAAGAAGGCAAAGAGTGGCTGCGATCGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CAA 90 bp TGCAAGGATGATCCTTTGAGAGGAGTTTTCCCTTTCTCGGAAGCTTaGGCATCATCTGTCTTCCCAGGGGTCTTGAGTGCACTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: CKDDPLRGVFPFSEA*ASSVFPGVLSALVL
Trigger: CAGCACAAGTGCACTCAAGACCCCTGGGAAGACAGATGATGCCAAAGCTTCCGAGAAAGGGAAAACTCCTCTCAAAGGATCATCCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp GGGAGCTCTACCCCATTATTGTCTGCACTGCATTGTTCAGCCAGGTaGGCAAGATACTGCTGCAGTTCCTTACTTGACTTGTGGTCCACA +
Preference number: 6 (lower is better)
Translates to: GSSTPLLSALHCSAR*ARYCCSSLLDLWST
Trigger: TGTGGACCACAAGTCAAGTAAGGAACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATGCAGTGCAGACAATAATGGGGTAGAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp TGGGAGAGGTTGGTGGGACTCACCAAGTTGGAAAAGTaGTATTTTCCGGTGGCTGACGATGACATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: WERLVGLTKLEK*YFPVADDDMAE
Trigger: TTCTGCCATGTCATCGTCAGCCACCGGAAAATATCACTTTTCCAACTTGGTGAGTCCCACCAACCTCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp TTCGACTTTCTCATTTGCAATGATCTGGATGATGTCTaGCAGAAGGACCCCGTCCGCAATGTCCTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: FDFLICNDLDDV*QKDPVRNVLLQ
Trigger: TTGCAGCAGGACATTGCGGACGGGGTCCTTCTGGCAGACATCATCCAGATCATTGCAAATGAGAAAGTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 72 bp GTTGCGCTGTTGATACTAGAAACACTTTCAGAGGAGTaGTGTCTTCTGATGCGGAGATCTTTGGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: VALLILETLSEE*CLLMRRSLGGW
Trigger: CCACCCTCCCAAAGATCTCCGCATCAGAAGACAGCACTCCTCTGAAAGTGTTTCTAGTATCAACAGCGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp GAATTCCACTGGACGATGGAATTAAGCTTTCTTTCTTaGCCGCTGCAGTCTTGCTGCCCTTTGGGATCAAGC +
Preference number: 6 (lower is better)
Translates to: EFHWTMELSFLS*PLQSCCPLGSS
Trigger: GCTTGATCCCAAAGGGCAGCAAGACTGCAGCGGCCAAGAAAGAAAGCTTAATTCCATCGTCCAGTGGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp CCGTCTTACTGTAGGAAGAATCCATCTTTGTGGGACTaGTACAGGAGTCAGCAGGTGGTAAAGAGGTGCCTT +
Preference number: 6 (lower is better)
Translates to: PSYCRKNPSLWD*YRSQQVVKRCL
Trigger: AAGGCACCTCTTTACCACCTGCTGACTCCTGTACCAGTCCCACAAAGATGGATTCTTCCTACAGTAAGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp GCTGCTGGTAATCATAGTGGAAGCCCCTACACCACTTaGCTTCTTGTATCCAAAAGAACTGCTGGCTGTCGA +
Preference number: 6 (lower is better)
Translates to: AAGNHSGSPYTT*LLVSKRTAGCR
Trigger: TCGACAGCCAGCAGTTCTTTTGGATACAAGAAGCCAAGTGGTGTAGGGGCTTCCACTATGATTACCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp CCTCTTCAGCCCAACTTCGGCTTGTACTGCTTGGCTTaGAGGAGCCGTTTTCATCTTCAGACTTACTGTCTT +
Preference number: 6 (lower is better)
Translates to: PLQPNFGLYCLA*RSRFHLQTYCL
Trigger: AAGACAGTAAGTCTGAAGATGAAAACGGCTCCTCCAAGCCAAGCAGTACAAGCCGAAGTTGGGCTGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CAA 72 bp CTGCTGAAGCTCCACCAAGGACTGGTAATACTGCTGTaGATGATGCTGCTGTTGCTTGTAGCGAGACAAGCT +
Preference number: 6 (lower is better)
Translates to: LLKLHQGLVILL*MMLLLLVARQA
Trigger: AGCTTGTCTCGCTACAAGCAACAGCAGCATCATCAACAGCAGTATTACCAGTCCTTGGTGGAGCTTCAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CAA 72 bp TCTTCAGCTCCTCAGGACTATCCCAGGTCTCATCTGTaGTCGAACGTTTCTCCGCATCTGTTTTCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: SSAPQDYPRSHL*SNVSPHLFSAE
Trigger: CTCAGCTGAAAACAGATGCGGAGAAACGTTCGACAACAGATGAGACCTGGGATAGTCCTGAGGAGCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp AACAGGGAGCTCTACCCCATTATTGTCTGCACTGCATaGTTCAGCCAGGTTGGCAAGATACTGCTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: NRELYPIIVCTA*FSQVGKILLQF
Trigger: GAACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATGCAGTGCAGACAATAATGGGGTAGAGCTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp GAAGTTGCTGTGTCCGGGACTCGGTTAAGACTTCTGGTATATAGGTaGAGCCCACCATCTGTCATGTACCCACTGTTGATATCATCCGCT +
Preference number: 6 (lower is better)
Translates to: EVAVSGTRLRLLVYR*SPPSVMYPLLISSA
Trigger: AGCGGATGATATCAACAGTGGGTACATGACAGATGGTGGGCTCAACCTATATACCAGAAGTCTTAACCGAGTCCCGGACACAGCAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp AAGAGGTGCCTTCATTTTCTGAATGTGCCCTATAAATaGACGGAGCCACCGTGGCTGTGTTGGGATGGCTAT +
Preference number: 6 (lower is better)
Translates to: KRCLHFLNVPYK*TEPPWLCWDGY
Trigger: ATAGCCATCCCAACACAGCCACGGTGGCTCCGTTCATTTATAGGGCACATTCAGAAAATGAAGGCACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS GCA 72 bp ATCGTGAACGCCTCTCTGTATGACATCTCTGGAAGTTaGTGTGTCCGGGACTCGGTTAAGACTTCTGGTATA +
Preference number: 6 (lower is better)
Translates to: IVNASLYDISGS*CVRDSVKTSGI
Trigger: TATACCAGAAGTCTTAACCGAGTCCCGGACACAGCAACTTCCAGAGATGTCATACAGAGAGGCGTTCACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp CCTTCAATATTTCAATTTCGTTCTGCATCCGGTTCATaGCTTCCCGGATCTGATCGAGATGGTGAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: PSIFQFRSASGS*LPGSDRDGEQS
Trigger: GCTCTGCTCACCATCTCGATCAGATCCGGGAAGCCATGAACCGGATGCAGAACGAAATTGAAATATTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp GTGATGTTCAGGTTGTTGAGTGAAAGCCCTAAGGACTaGCGTGAAGAAGAAGAAGAGGCTGTGCTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: VMFRLLSESPKD*REEEEEAVLEE
Trigger: TTCCTCAAGCACAGCCTCTTCTTCTTCTTCACGCCAGTCCTTAGGGCTTTCACTCAACAACCTGAACATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp CACTATCGCCGTCACAGCTTTGAGTGCTGGGGTAATTaGCGGCTTCTTGGAGCTTCATTAGCATATTCATCA +
Preference number: 6 (lower is better)
Translates to: HYRRHSFECWGN*RLLGASLAYSS
Trigger: TGATGAATATGCTAATGAAGCTCCAAGAAGCCGCCAATTACCCCAGCACTCAAAGCTGTGACGGCGATAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GTGTCCGGGACTCGGTTAAGACTTCTGGTATATAGGTaGAGCCCACCATCTGTCATGTACCCACTGTTGATA +
Preference number: 6 (lower is better)
Translates to: VSGTRLRLLVYR*SPPSVMYPLLI
Trigger: TATCAACAGTGGGTACATGACAGATGGTGGGCTCAACCTATATACCAGAAGTCTTAACCGAGTCCCGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp CCTGCATCTGAAGGAGACCTTTGCAAGGATGATCCTTaGAGAGGAGTTTTCCCTTTCTCGGAAGCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: PASEGDLCKDDP*RGVFPFSEALA
Trigger: TGCCAAAGCTTCCGAGAAAGGGAAAACTCCTCTCAAAGGATCATCCTTGCAAAGGTCTCCTTCAGATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp TGTATCCACCAACATCCACTTCAGAAGACACATCCAGGTCACTGCTaGCTTTCTCGCTCATATCTATTTGTGACATGTTTCCCAGACGCG +
Preference number: 6 (lower is better)
Translates to: CIHQHPLQKTHPGHC*LSRSYLFVTCFPDA
Trigger: CGCGTCTGGGAAACATGTCACAAATAGATATGAGCGAGAAAGCAAGCAGTGACCTGGATGTGTCTTCTGAAGTGGATGTTGGTGGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp CTGCATCTGAAGGAGACCTTTGCAAGGATGATCCTTTaGGAGGAGTTTTCCCTTTCTCGGAAGCTTTGGCAT +
Preference number: 6 (lower is better)
Translates to: LHLKETFARMIL*EEFSLSRKLWH
Trigger: ATGCCAAAGCTTCCGAGAAAGGGAAAACTCCTCTCAAAGGATCATCCTTGCAAAGGTCTCCTTCAGATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp AGTTTTTCCACTAACACCAATGGATCCTATCAAATATaGCTGAGACTTCTGGTCCTTGGCTCGACCGTAGCC +
Preference number: 6 (lower is better)
Translates to: SFSTNTNGSYQI*LRLLVLGSTVA
Trigger: GGCTACGGTCGAGCCAAGGACCAGAAGTCTCAGGCATATTTGATAGGATCCATTGGTGTTAGTGGAAAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp CCCGTCCCGCTTGGTCCTGAGAGGATAATTCTGTGGTaGTCCATCAACAAGTTAAAGTACCTTTGGGTAATT +
Preference number: 6 (lower is better)
Translates to: PVPLGPERIILW*SINKLKYLWVI
Trigger: AATTACCCAAAGGTACTTTAACTTGTTGATGGAGCACCACAGAATTATCCTCTCAGGACCAAGCGGGACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp TCTTTCTGCATAGTTGGATTCTCTCTGGCTAGCCTTTaGAGCGTTTCCAAACCAGTTGGAAATGCGCACAGT +
Preference number: 6 (lower is better)
Translates to: SFCIVGFSLASL*SVSKPVGNAHS
Trigger: ACTGTGCGCATTTCCAACTGGTTTGGAAACGCTGCAAAGGCTAGCCAGAGAGAATCCAACTATGCAGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CCA 72 bp GCTTTCTTTCTTGGCCGCTGCAGTCTTGCTGCCCTTTaGGATCAAGCTTGCAATTTTAGAAGTCTTTTTCGG +
Preference number: 6 (lower is better)
Translates to: AFFLGRCSLAAL*DQACNFRSLFR
Trigger: CCGAAAAAGACTTCTAAAATTGCAAGCTTGATCCCAAAGGGCAGCAAGACTGCAGCGGCCAAGAAAGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp CCTGCCGAGATGATGGGGTGTATCTTAGTCCCTTTTTaGGTAGTGTATTTCTGTCAAGCTGCATGCTTTCTG +
Preference number: 6 (lower is better)
Translates to: PAEMMGCILVPF*VVYFCQAACFL
Trigger: CAGAAAGCATGCAGCTTGACAGAAATACACTACCCAAAAAGGGACTAAGATACACCCCATCATCTCGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS CCA 72 bp TTTCCCGTCCCGCTTGGTCCTGAGAGGATAATTCTGTaGTGCTCCATCAACAAGTTAAAGTACCTTTGGGTA +
Preference number: 6 (lower is better)
Translates to: FPVPLGPERIIL*CSINKLKYLWV
Trigger: TACCCAAAGGTACTTTAACTTGTTGATGGAGCACCACAGAATTATCCTCTCAGGACCAAGCGGGACGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp CCCCATTATTGTCTGCACTGCATTGTTCAGCCAGGTTaGCAAGATACTGCTGCAGTTCCTTACTTGACTTGT +
Preference number: 6 (lower is better)
Translates to: PHYCLHCIVQPG*QDTAAVPYLTC
Trigger: ACAAGTCAAGTAAGGAACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATGCAGTGCAGACAATAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp AGCATATTCATCAAGGGGTCCCCTTCTGTATCAGTCTaGGGAATGTGCTTTGACGTTGTGGCTTCCTTTGTA +
Preference number: 6 (lower is better)
Translates to: SIFIKGSPSVSV*GMCFDVVASFV
Trigger: TACAAAGGAAGCCACAACGTCAAAGCACATTCCCCAGACTGATACAGAAGGGGACCCCTTGATGAATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp GTAATCATAGTGGAAGCCCCTACACCACTTGGCTTCTaGTATCCAAAAGAACTGCTGGCTGTCGATCTTCCA +
Preference number: 6 (lower is better)
Translates to: VIIVEAPTPLGF*YPKELLAVDLP
Trigger: TGGAAGATCGACAGCCAGCAGTTCTTTTGGATACAAGAAGCCAAGTGGTGTAGGGGCTTCCACTATGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp ACCCCATTATTGTCTGCACTGCATTGTTCAGCCAGGTaGGCAAGATACTGCTGCAGTTCCTTACTTGACTTG +
Preference number: 6 (lower is better)
Translates to: TPLLSALHCSAR*ARYCCSSLLDL
Trigger: CAAGTCAAGTAAGGAACTGCAGCAGTATCTTGCCAACCTGGCTGAACAATGCAGTGCAGACAATAATGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp TCCAGAATTATGACAACAGGGAGCTCTACCCCATTATaGTCTGCACTGCATTGTTCAGCCAGGTTGGCAAGA +
Preference number: 6 (lower is better)
Translates to: SRIMTTGSSTPL*SALHCSARLAR
Trigger: TCTTGCCAACCTGGCTGAACAATGCAGTGCAGACAATAATGGGGTAGAGCTCCCTGTTGTCATAATTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp CCACTGGACGATGGAATTAAGCTTTCTTTCTTGGCCGCTGCAGTCTaGCTGCCCTTTGGGATCAAGCTTGCAATTTTAGAAGTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: PLDDGIKLSFLAAAV*LPFGIKLAILEVFF
Trigger: GAAAAAGACTTCTAAAATTGCAAGCTTGATCCCAAAGGGCAGCAAGACTGCAGCGGCCAAGAAAGAAAGCTTAATTCCATCGTCCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS TCA 72 bp AGAAGTGCTGGGAGGCTGTGTGTTTCCATTTATACCTaGAGATGGTTGAGGTCCTTTGGGGGAATCTTTTTC +
Preference number: 6 (lower is better)
Translates to: RSAGRLCVSIYT*RWLRSFGGIFF
Trigger: GAAAAAGATTCCCCCAAAGGACCTCAACCATCTTCAGGTATAAATGGAAACACACAGCCTCCCAGCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000032719.15
ENSMUST00000239301.2
CDS TCA 72 bp TCAAAGAGCCCACATGGTGAAGATTGTCCAGAATTATaGCAACAGGGAGCTCTACCCCATTATTGTCTGCAC +
Preference number: 6 (lower is better)
Translates to: SKSPHGEDCPEL*QQGALPHYCLH
Trigger: GTGCAGACAATAATGGGGTAGAGCTCCCTGTTGTCATAATTCTGGACAATCTTCACCATGTGGGCTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS GCA 72 bp AATTATGACAACAGGGAGCTCTACCCCATTATTGTCTaGACTGCATTGTTCAGCCAGGTTGGCAAGATACTG +
Preference number: 6 (lower is better)
Translates to: NYDNRELYPIIV*TALFSQVGKIL
Trigger: CAGTATCTTGCCAACCTGGCTGAACAATGCAGTGCAGACAATAATGGGGTAGAGCTCCCTGTTGTCATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp TTGGAGTCAGCATCATTACCACTGCCAATGCTGGAATaGCTCGTTGCGCTGTTGATACTAGAAACACTTTCA +
Preference number: 6 (lower is better)
Translates to: LESASLPLPMLE*LVALLILETLS
Trigger: TGAAAGTGTTTCTAGTATCAACAGCGCAACGAGCCATTCCAGCATTGGCAGTGGTAATGATGCTGACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS TCA 72 bp ATGATACAGGGACTGCACAGACCTAGACAGAAACCTTaGGAGACACCTTCTTTCTGCATAGTTGGATTCTCT +
Preference number: 6 (lower is better)
Translates to: MIQGLHRPRQKP*ETPSFCIVGFS
Trigger: AGAGAATCCAACTATGCAGAAAGAAGGTGTCTCTCAAGGTTTCTGTCTAGGTCTGTGCAGTCCCTGTATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238286.2
CDS CCA 72 bp TTGGCAAGATACTGCTGCAGTTCCTTACTTGACTTGTaGTCCACATTAAAGGTAGCAATGGCATCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: LARYCCSSLLDL*STLKVAMASSV
Trigger: GACAGAAGATGCCATTGCTACCTTTAATGTGGACCACAAGTCAAGTAAGGAACTGCAGCAGTATCTTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp AGGTTGGCAAGATACTGCTGCAGTTCCTTACTTGACTaGTGGTCCACATTAAAGGTAGCAATGGCATCTTCT +
Preference number: 6 (lower is better)
Translates to: RLARYCCSSLLD*WSTLKVAMASS
Trigger: AGAAGATGCCATTGCTACCTTTAATGTGGACCACAAGTCAAGTAAGGAACTGCAGCAGTATCTTGCCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 90 bp TCATCTAGCAAAATATCTGAGGTAACAGACTCTGTGATGTTCAGGTaGTTGAGTGAAAGCCCTAAGGACTGGCGTGAAGAAGAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: SSSKISEVTDSVMFR*LSESPKDWREEEEE
Trigger: CTCTTCTTCTTCTTCACGCCAGTCCTTAGGGCTTTCACTCAACAACCTGAACATCACAGAGTCTGTTACCTCAGATATTTTGCTAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp CAACATCCACTTCAGAAGACACATCCAGGTCACTGCTaGCTTTCTCGCTCATATCTATTTGTGACATGTTTC +
Preference number: 6 (lower is better)
Translates to: QHPLQKTHPGHC*LSRSYLFVTCF
Trigger: GAAACATGTCACAAATAGATATGAGCGAGAAAGCAAGCAGTGACCTGGATGTGTCTTCTGAAGTGGATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp AAAATATCTGAGGTAACAGACTCTGTGATGTTCAGGTaGTTGAGTGAAAGCCCTAAGGACTGGCGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: KISEVTDSVMFR*LSESPKDWREE
Trigger: TTCTTCACGCCAGTCCTTAGGGCTTTCACTCAACAACCTGAACATCACAGAGTCTGTTACCTCAGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CCA 72 bp ATTCTGTGGTGCTCCATCAACAAGTTAAAGTACCTTTaGGTAATTGGCTTAGGAATCAGTGTATCAAAAACA +
Preference number: 6 (lower is better)
Translates to: ILWCSINKLKYL*VIGLGISVSKT
Trigger: TGTTTTTGATACACTGATTCCTAAGCCAATTACCCAAAGGTACTTTAACTTGTTGATGGAGCACCACAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2
CDS CAA 72 bp AATTCTGTGGTGCTCCATCAACAAGTTAAAGTACCTTaGGGTAATTGGCTTAGGAATCAGTGTATCAAAAAC +
Preference number: 6 (lower is better)
Translates to: NSVVLHQQVKVP*GNWLRNQCIKN
Trigger: GTTTTTGATACACTGATTCCTAAGCCAATTACCCAAAGGTACTTTAACTTGTTGATGGAGCACCACAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032719.15
ENSMUST00000238286.2
ENSMUST00000239301.2