Pregenerated sensors for NATD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018931Ensembl transcript IDs: ENSMUST00000019075.4
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGATGCCAGGAGGTGGTGGCAGGGACTCTACGTCACCCTCTTGCTaGTCAGAGCAGGGACCCAGTAGCCAGGCCAGAGGAGATGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LMPGGGGRDSTSPSC*SEQGPSSQARGDVQ Trigger: CTGCACATCTCCTCTGGCCTGGCTACTGGGTCCCTGCTCTGATCAGCAAGAGGGTGACGTAGAGTCCCTGCCACCACCTCCTGGCATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | TGCTCATGTGTTGGTGTGCATGCTCAGATGGGCCTGGGCCAGAGCTaGATCCTCGGCTCTCTCACATGCCAGGATTGGCTGCCCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: CSCVGVHAQMGLGQS*ILGSLTCQDWLPSA Trigger: GGCAGAGGGCAGCCAATCCTGGCATGTGAGAGAGCCGAGGATTCAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAACACATGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR GCA 90 bp | GTGTGGGTACCTGACCCGCCTCTTGTGCTCATGTGTTGGTGTGCATaGTCAGATGGGCCTGGGCCAGAGCTGAATCCTCGGCTCTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: VWVPDPPLVLMCWCA*SDGPGPELNPRLSH Trigger: GTGAGAGAGCCGAGGATTCAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAACACATGAGCACAAGAGGCGGGTCAGGTACCCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | CCCGCCTCTTGTGCTCATGTGTTGGTGTGCATGCTCAGATGGGCCTaGGCCAGAGCTGAATCCTCGGCTCTCTCACATGCCAGGATTGGC | + |
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Preference number: 1 (lower is better) Translates to: PASCAHVLVCMLRWA*ARAESSALSHARIG Trigger: GCCAATCCTGGCATGTGAGAGAGCCGAGGATTCAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAACACATGAGCACAAGAGGCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | CAGTGTGGAGTGTGGGTACCTGACCCGCCTCTTGTGCTCATGTGTTaGTGTGCATGCTCAGATGGGCCTGGGCCAGAGCTGAATCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: QCGVWVPDPPLVLMC*CACSDGPGPELNPR Trigger: CCGAGGATTCAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAACACATGAGCACAAGAGGCGGGTCAGGTACCCACACTCCACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | GGACCACCTCAGCAGAGCTGGAGGACCTCTGTGGGAAGCGGGTCTTaGCCACTTGGCCTGCCCTTCGTCCCACTCTGGCTTTTCACATAT | + |
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Preference number: 1 (lower is better) Translates to: GPPQQSWRTSVGSGS*PLGLPFVPLWLFTY Trigger: ATATGTGAAAAGCCAGAGTGGGACGAAGGGCAGGCCAAGTGGTCAAGACCCGCTTCCCACAGAGGTCCTCCAGCTCTGCTGAGGTGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | GCCCTTCGTCCCACTCTGGCTTTTCACATATCCACAACCAGCAGCTaGTCCCCAGAATCCTGGATGAAGGCTGCAGACGGGTGTCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: ALRPTLAFHISTTSS*SPESWMKAADGCPC Trigger: GCAAGGACACCCGTCTGCAGCCTTCATCCAGGATTCTGGGGACCAGCTGCTGGTTGTGGATATGTGAAAAGCCAGAGTGGGACGAAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | TCAGCAGAGCTGGAGGACCTCTGTGGGAAGCGGGTCTTGACCACTTaGCCTGCCCTTCGTCCCACTCTGGCTTTTCACATATCCACAACC | + |
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Preference number: 1 (lower is better) Translates to: SAELEDLCGKRVLTT*PALRPTLAFHISTT Trigger: GGTTGTGGATATGTGAAAAGCCAGAGTGGGACGAAGGGCAGGCCAAGTGGTCAAGACCCGCTTCCCACAGAGGTCCTCCAGCTCTGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | AGATGGCAAAGTTCCCCAGACCTGGGCTGGGATCCCGAAGCTTGTTaGCACTGTTGTGCTAGGAGACCTCAGTCAGGCTCTGGCAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: RWQSSPDLGWDPEAC*HCCARRPQSGSGSL Trigger: AAGGCTGCCAGAGCCTGACTGAGGTCTCCTAGCACAACAGTGCCAACAAGCTTCGGGATCCCAGCCCAGGTCTGGGGAACTTTGCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | GCTGCTCAGCAGACCACACTAAGCCTCTGGGCTGGCTCCTGTAGGTaGATGCATGAGAAGGGAGTCCCTCTGACAGGGAACCACATGAGA | + |
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Preference number: 1 (lower is better) Translates to: AAQQTTLSLWAGSCR*MHEKGVPLTGNHMR Trigger: TCTCATGTGGTTCCCTGTCAGAGGGACTCCCTTCTCATGCATTCACCTACAGGAGCCAGCCCAGAGGCTTAGTGTGGTCTGCTGAGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | GGGCTGTCTAGTTGTGTGGGTTGCAGGCTGGTGACCCACTTAATCTaGCCCTGTCCCTTCAACTGCAGGACAGGCCCAGTAAGTGGTGTC | + |
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Preference number: 1 (lower is better) Translates to: GLSSCVGCRLVTHLI*PCPFNCRTGPVSGV Trigger: GACACCACTTACTGGGCCTGTCCTGCAGTTGAAGGGACAGGGTCAGATTAAGTGGGTCACCAGCCTGCAACCCACACAACTAGACAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | AGACAAGCCCACGGAGGAAGCCCAGCCACTCTTCTTGGGTCCACATaGCTCAGGGCCCTCATTCAAGTACTGTATTGTGGACACACTGCC | + |
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Preference number: 1 (lower is better) Translates to: RQAHGGSPATLLGST*LRALIQVLYCGHTA Trigger: GGCAGTGTGTCCACAATACAGTACTTGAATGAGGGCCCTGAGTCATGTGGACCCAAGAAGAGTGGCTGGGCTTCCTCCGTGGGCTTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR GCA 90 bp | AATAGGCTGGGCACCAGGGAGAACCACTTCCTACACAACCTATCTTaGCCTATTTCTTCGCTCTGGGGGCCCCTGACCTCACTGTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: NRLGTRENHFLHNLS*PISSLWGPLTSLCL Trigger: AAGGCACAGTGAGGTCAGGGGCCCCCAGAGCGAAGAAATAGGGCAAGATAGGTTGTGTAGGAAGTGGTTCTCCCTGGTGCCCAGCCTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | AACACCCTCCTCATTTGCAGAAAGGACATTGATGCCAGGAGGTGGTaGCAGGGACTCTACGTCACCCTCTTGCTGATCAGAGCAGGGACC | + |
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Preference number: 1 (lower is better) Translates to: NTLLICRKDIDARRW*QGLYVTLLLIRAGT Trigger: GGTCCCTGCTCTGATCAGCAAGAGGGTGACGTAGAGTCCCTGCCACCACCTCCTGGCATCAATGTCCTTTCTGCAAATGAGGAGGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | GGTAGTATGGAGGGATACAGATGGCAAAGTTCCCCAGACCTGGGCTaGGATCCCGAAGCTTGTTGGCACTGTTGTGCTAGGAGACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: GSMEGYRWQSSPDLG*DPEACWHCCARRPQ Trigger: CTGAGGTCTCCTAGCACAACAGTGCCAACAAGCTTCGGGATCCCAGCCCAGGTCTGGGGAACTTTGCCATCTGTATCCCTCCATACTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | TCTTCTTGGCTCCAGGAACACCCTCCTCATTTGCAGAAAGGACATTaGTGCCAGGAGGTGGTGGCAGGGACTCTACGTCACCCTCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: SSWLQEHPPHLQKGH*CQEVVAGTLRHPLA Trigger: AGCAAGAGGGTGACGTAGAGTCCCTGCCACCACCTCCTGGCATCAATGTCCTTTCTGCAAATGAGGAGGGTGTTCCTGGAGCCAAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | ACAGGGAACCACATGAGAAGCCAAACAGTGTGGAGTGTGGGTACCTaGCCCGCCTCTTGTGCTCATGTGTTGGTGTGCATGCTCAGATGG | + |
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Preference number: 1 (lower is better) Translates to: TGNHMRSQTVWSVGT*PASCAHVLVCMLRW Trigger: CCATCTGAGCATGCACACCAACACATGAGCACAAGAGGCGGGTCAGGTACCCACACTCCACACTGTTTGGCTTCTCATGTGGTTCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | TTTCAGTACTCCTGCAGAGTGGGAAGGTGTCTGTGCACAGATGTCTaGAGTAGCCTAAGCAGCAGTGGGGAGATGGTCAGAAGCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: FQYSCRVGRCLCTDV*SSLSSSGEMVRSQE Trigger: CTCCTGGCTTCTGACCATCTCCCCACTGCTGCTTAGGCTACTCCAGACATCTGTGCACAGACACCTTCCCACTCTGCAGGAGTACTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | GTTCAGGTAGTATGGAGGGATACAGATGGCAAAGTTCCCCAGACCTaGGCTGGGATCCCGAAGCTTGTTGGCACTGTTGTGCTAGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: VQVVWRDTDGKVPQT*AGIPKLVGTVVLGD Trigger: GTCTCCTAGCACAACAGTGCCAACAAGCTTCGGGATCCCAGCCCAGGTCTGGGGAACTTTGCCATCTGTATCCCTCCATACTACCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | GGCCAGGTGCTCCAGGGGAGTGCTCCTGTTCATAAGCCAGACTTCTaGATGCTGGCCATGTGTACCTTGCAACTCAAGACAGATCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GQVLQGSAPVHKPDF*MLAMCTLQLKTDPH Trigger: ATGAGGATCTGTCTTGAGTTGCAAGGTACACATGGCCAGCATTCAGAAGTCTGGCTTATGAACAGGAGCACTCCCCTGGAGCACCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR GCA 90 bp | AGGGTTCCTGTTGTTCTTCTTGGCTCCAGGAACACCCTCCTCATTTaGAGAAAGGACATTGATGCCAGGAGGTGGTGGCAGGGACTCTAC | + |
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Preference number: 1 (lower is better) Translates to: RVPVVLLGSRNTLLI*RKDIDARRWWQGLY Trigger: GTAGAGTCCCTGCCACCACCTCCTGGCATCAATGTCCTTTCTGCAAATGAGGAGGGTGTTCCTGGAGCCAAGAAGAACAACAGGAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR GCA 90 bp | TCCCAGCCAGGATGCATGGCTTTCTGGTCCAGATTTCAGTACTCCTaGAGAGTGGGAAGGTGTCTGTGCACAGATGTCTGGAGTAGCCTA | + |
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Preference number: 1 (lower is better) Translates to: SQPGCMAFWSRFQYS*RVGRCLCTDVWSSL Trigger: TAGGCTACTCCAGACATCTGTGCACAGACACCTTCCCACTCTGCAGGAGTACTGAAATCTGGACCAGAAAGCCATGCATCCTGGCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | GCAGTAGTGAGGAGTATGCTGGGTTATCCTAGAACTCTAGGAGGCTaGAAGAGGAGCATCAAGAACCGGGTAAGAGCCAGAGGTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: AVVRSMLGYPRTLGG*KRSIKNRVRARGAG Trigger: TCCTGCACCTCTGGCTCTTACCCGGTTCTTGATGCTCCTCTTCCAGCCTCCTAGAGTTCTAGGATAACCCAGCATACTCCTCACTACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | TGGCCCAGATACTACTGGTGGCAGGTTCAGAGTAGGAAAGGCACATaGGTTACTGCCTGTGTAGACTGGGCAAGGAAGAGAAAGCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: WPRYYWWQVQSRKGT*VTACVDWARKRKPR Trigger: CCTAGGCTTTCTCTTCCTTGCCCAGTCTACACAGGCAGTAACTCATGTGCCTTTCCTACTCTGAACCTGCCACCAGTAGTATCTGGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | AGCTGTTGCCCAGCAATGAGGAGTGTGGCCTCTAGGGTAAAACTCTaGGGTTCAGGTAGTATGGAGGGATACAGATGGCAAAGTTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: SCCPAMRSVASRVKL*GSGSMEGYRWQSSP Trigger: TGGGGAACTTTGCCATCTGTATCCCTCCATACTACCTGAACCTCAGAGTTTTACCCTAGAGGCCACACTCCTCATTGCTGGGCAACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 90 bp | TGCTCCAGGGGAGTGCTCCTGTTCATAAGCCAGACTTCTGAATGCTaGCCATGTGTACCTTGCAACTCAAGACAGATCCTCATTTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: CSRGVLLFISQTSEC*PCVPCNSRQILISA Trigger: GGCTGAAATGAGGATCTGTCTTGAGTTGCAAGGTACACATGGCCAGCATTCAGAAGTCTGGCTTATGAACAGGAGCACTCCCCTGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR GCA 90 bp | AGATTGAGGACAGCACTGAAGAGTGACAGAAATAACACTGTCAACTaGTCTTCCCAAGGCACCGAGAGAAAAGCAGAGAGCACCTTTGAC | + |
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Preference number: 1 (lower is better) Translates to: RLRTALKSDRNNTVN*SSQGTERKAESTFD Trigger: GTCAAAGGTGCTCTCTGCTTTTCTCTCGGTGCCTTGGGAAGAGCAGTTGACAGTGTTATTTCTGTCACTCTTCAGTGCTGTCCTCAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR GCA 90 bp | TGCATTGTTACTGTGAAGGGTGTCTGGCTAACCTTCCTTGCTCTTTaGCACAGACAGTGTAGCAAAAAGCCAGATGTGACCCTTGACCTT | + |
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Preference number: 1 (lower is better) Translates to: CIVTVKGVWLTFLAL*HRQCSKKPDVTLDL Trigger: AAGGTCAAGGGTCACATCTGGCTTTTTGCTACACTGTCTGTGGCAAAGAGCAAGGAAGGTTAGCCAGACACCCTTCACAGTAACAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 90 bp | GGCCACGTGATTATGGTGTTGATATTCCTCCAGCTTCCTGTAATCTaGGGAACTTTGAGAATTTTAACATTTTCAGAAGTTCTCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: GHVIMVLIFLQLPVI*GTLRILTFSEVLCP Trigger: AGGGCAGAGAACTTCTGAAAATGTTAAAATTCTCAAAGTTCCTCAGATTACAGGAAGCTGGAGGAATATCAACACCATAATCACGTGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CAA 90 bp | GGGCCTGGGCCAGAGCTGAATCCTCGGCTCTCTCACATGCCAGGATaGGCTGCCCTCTGCCGCCGTCCCACTGCCTGTGCCAGGGCACGC | + |
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Preference number: 2 (lower is better) Translates to: GPGPELNPRLSHMPG*AALCRRPTACARAR Trigger: GCGTGCCCTGGCACAGGCAGTGGGACGGCGGCAGAGGGCAGCCAATCCTGGCATGTGAGAGAGCCGAGGATTCAGCTCTGGCCCAGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCACGGAGGAAGCCCAGCCACTCTTCTTGGGTCCACATGACTCAGGGCCCGCTCATGTGTTGGTGTaGATGCTCAGATGGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KPTEEAQPLFLGPHDSGPAHVLV*MLRWAW Trigger: CCAGGCCCATCTGAGCATGCACACCAACACATGAGC...GGGCCCTGAGTCATGTGGACCCAAGAAGAGTGGCTGGGCTTCCTCCGTGGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CAA 90 bp | AGGACCACCTCAGCAGAGCTGGAGGACCTCTGTGGGAAGCGGGTCTaGACCACTTGGCCTGCCCTTCGTCCCACTCTGGCTTTTCACATA | + |
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Preference number: 2 (lower is better) Translates to: RTTSAELEDLCGKRV*TTWPALRPTLAFHI Trigger: TATGTGAAAAGCCAGAGTGGGACGAAGGGCAGGCCAAGTGGTCAAGACCCGCTTCCCACAGAGGTCCTCCAGCTCTGCTGAGGTGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCACGGAGGAAGCCCAGCCACTCTTCTTGGGTCCACATGACTCAGGGCCCATCCTGGATGAAGGCTaGAGACGGGTGTCCTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: KPTEEAQPLFLGPHDSGPILDEG*RRVSLQ Trigger: TTGCAAGGACACCCGTCTGCAGCCTTCATCCAGGAT...GGGCCCTGAGTCATGTGGACCCAAGAAGAGTGGCTGGGCTTCCTCCGTGGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGCAACATGTACCAGAAAGGCCATGCACTGAAGCAGTGCAGTGGTGGCCACCCCAGAATCCTGGATaGAGGCTGCAGACGGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GVQHVPERPCTEAVQWWPPQNPG*RLQTGV Trigger: GACACCCGTCTGCAGCCTTCATCCAGGATTCTGGGG...TGGCCACCACTGCACTGCTTCAGTGCATGGCCTTTCTGGTACATGTTGCACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTCCCTTCAACTGCAGGACAGGCCCAGTAAGTGGTGTCTCTTGGGAATTGGATGCCAGGAGGTGGTaGCAGGGACTCTACGTCACC | + |
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Preference number: 2 (lower is better) Translates to: PCPFNCRTGPVSGVSWELDARRW*QGLYVT Trigger: GGTGACGTAGAGTCCCTGCCACCACCTCCTGGCATC...CAATTCCCAAGAGACACCACTTACTGGGCCTGTCCTGCAGTTGAAGGGACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAAAGTTGCCCAAAGTTGTAAACACGGGATTGCTGATCTGTCCCCACCAGAGGCTGCCAAGGCAGTaGGGAATGCTCAGGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: PGKLPKVVNTGLLICPHQRLPRQ*GMLRPP Trigger: GGGTGGCCTGAGCATTCCTCACTGCCTTGGCAGCCT...CTGGTGGGGACAGATCAGCAATCCCGTGTTTACAACTTTGGGCAACTTTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCACGGAGGAAGCCCAGCCACTCTTCTTGGGTCCACATGACTCAGGGCCCAGATTTCAGTACTCCTaGAGAGTGGGAAGGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: KPTEEAQPLFLGPHDSGPRFQYS*RVGRCL Trigger: CAGACACCTTCCCACTCTGCAGGAGTACTGAAATCT...GGGCCCTGAGTCATGTGGACCCAAGAAGAGTGGCTGGGCTTCCTCCGTGGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR CCA 90 bp | GGGGTAGGGGGAGGCAGATGGGATAGCACCAGAGTGGCCCAGTTGGGCAGTATTTCCTGTTGTTCTTCTTaGCTCCAGGAACACCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GVGGGRWDSTRVAQLGSISCCSS*LQEHPP Trigger: AGGAGGGTGTTCCTGGAGCCAAGAAGAACAACAGGA...AATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATCTGCCTCCCCCTACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGCAACATGTACCAGAAAGGCCATGCACTGAAGCAGTGCAGTGGTGGCCATTGGCACCTCCACCTTaGGAAGCTGGCACACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GVQHVPERPCTEAVQWWPLAPPP*EAGTQG Trigger: ACCCTGTGTGCCAGCTTCCCAAGGTGGAGGTGCCAA...TGGCCACCACTGCACTGCTTCAGTGCATGGCCTTTCTGGTACATGTTGCACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CAA 90 bp | GGGGAGGCAGATGGGATAGCACCAGAGTGGCCCAGTTGGGCAGTATaGGCCAGGAGGAAGAGGCAGAGATATAGTTATTGCTACACCGCA | + |
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Preference number: 2 (lower is better) Translates to: GEADGIAPEWPSWAV*ARRKRQRYSYCYTA Trigger: TGCGGTGTAGCAATAACTATATCTCTGCCTCTTCCTCCTGGCCAATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATCTGCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGCAACATGTACCAGAAAGGCCATGCACTGAAGCAGTGCAGTGGTGGCCACAGGGCACGCAAGTCTaGGACAGAGAAAGGGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: GVQHVPERPCTEAVQWWPQGTQV*DRERVS Trigger: GCTAACCCTTTCTCTGTCTCAGACTTGCGTGCCCTG...TGGCCACCACTGCACTGCTTCAGTGCATGGCCTTTCTGGTACATGTTGCACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR GCA 90 bp | AATGTCTTCCTAGAGGCCCAGGGGTTTCTCTGGACCCCGAAGAGTCCCTGTCAGGTGGGAAGGTGTCTGTaGACAGATGTCTGGAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: NVFLEAQGFLWTPKSPCQVGRCL*TDVWSS Trigger: GCTACTCCAGACATCTGTGCACAGACACCTTCCCAC...CTGACAGGGACTCTTCGGGGTCCAGAGAAACCCCTGGGCCTCTAGGAAGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CAA 90 bp | TTCTTCTTGGCTCCAGGAACACCCTCCTCATTTGCAGAAAGGACATaGATGCCAGGAGGTGGTGGCAGGGACTCTACGTCACCCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: FFLAPGTPSSFAERT*MPGGGGRDSTSPSC Trigger: GCAAGAGGGTGACGTAGAGTCCCTGCCACCACCTCCTGGCATCAATGTCCTTTCTGCAAATGAGGAGGGTGTTCCTGGAGCCAAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR TCA 90 bp | ATCCCACATCAGTACCTGAGTGCTCTTCGTTCTTCGGTGCAGGCTGACATTGCTACGTCACCCTCTTGCTaGTCAGAGCAGGGACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: IPHQYLSALRSSVQADIATSPSC*SEQGPS Trigger: ACTGGGTCCCTGCTCTGATCAGCAAGAGGGTGACGT...AGCAATGTCAGCCTGCACCGAAGAACGAAGAGCACTCAGGTACTGATGTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTCCCTTCAACTGCAGGACAGGCCCAGTAAGTGGTGTCTCTTGGGAATTGCTTCTTGGGTCCACATaGCTCAGGGCCCTCATTCAA | + |
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Preference number: 2 (lower is better) Translates to: PCPFNCRTGPVSGVSWELLLGST*LRALIQ Trigger: TTGAATGAGGGCCCTGAGTCATGTGGACCCAAGAAG...CAATTCCCAAGAGACACCACTTACTGGGCCTGTCCTGCAGTTGAAGGGACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR GCA 90 bp | GGGGTAGGGGGAGGCAGATGGGATAGCACCAGAGTGGCCCAGTTGGGCAGTATTAACACCCTCCTCATTTaGAGAAAGGACATTGATGCC | + |
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Preference number: 2 (lower is better) Translates to: GVGGGRWDSTRVAQLGSINTLLI*RKDIDA Trigger: GGCATCAATGTCCTTTCTGCAAATGAGGAGGGTGTT...AATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATCTGCCTCCCCCTACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR CCA 90 bp | ATTCAAGTACTGTATTGTGGACACACTGCCACCGCAGCTGTCAGAGCAGTCAGCCTGAGCCTGTCCCCATaGGAACAGGTTCCTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: IQVLYCGHTATAAVRAVSLSLSP*EQVPES Trigger: GCTCTCAGGAACCTGTTCCCATGGGGACAGGCTCAG...GCTGACTGCTCTGACAGCTGCGGTGGCAGTGTGTCCACAATACAGTACTTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTGGTATTGGGACTGACTTCCTGGAAAGTTGCCCAAAGTTGTAAACACGGGCTCACATGCCAGGATTaGCTGCCCTCTGCCGCCGTC | + |
|
Preference number: 2 (lower is better) Translates to: LLVLGLTSWKVAQSCKHGLTCQD*LPSAAV Trigger: GACGGCGGCAGAGGGCAGCCAATCCTGGCATGTGAG...CCCGTGTTTACAACTTTGGGCAACTTTCCAGGAAGTCAGTCCCAATACCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CCA 90 bp | AATGTCTTCCTAGAGGCCCAGGGGTTTCTCTGGACCCCGAAGAGTCCCTGTCAGCTTGTGCTCATGTGTTaGTGTGCATGCTCAGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: NVFLEAQGFLWTPKSPCQLVLMC*CACSDG Trigger: CCCATCTGAGCATGCACACCAACACATGAGCACAAG...CTGACAGGGACTCTTCGGGGTCCAGAGAAACCCCTGGGCCTCTAGGAAGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGAAAGTTGCCCAAAGTTGTAAACACGGGATTGCTGATCTGTCCCCACCAGAGAGAAAGCCTAGGGTaGGGTCTGAGCACTGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: PGKLPKVVNTGLLICPHQRESLG*GLSTAQ Trigger: CTGTGCAGTGCTCAGACCTCACCCTAGGCTTTCTCT...CTGGTGGGGACAGATCAGCAATCCCGTGTTTACAACTTTGGGCAACTTTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTTCTGTCAGGAACCCTGAATGACCAACTTGAGGGCAAAGAGCAGCTCACGGCAGCAGTGGGGAGATaGTCAGAAGCCAGGAGTACA | + |
|
Preference number: 2 (lower is better) Translates to: TVLSGTLNDQLEGKEQLTAAVGR*SEARST Trigger: TGTACTCCTGGCTTCTGACCATCTCCCCACTGCTGC...CGTGAGCTGCTCTTTGCCCTCAAGTTGGTCATTCAGGGTTCCTGACAGAACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTCTGTCAGGAACCCTGAATGACCAACTTGAGGGCAAAGAGCAGCTCACGTTGCAGAAAGGACATTaGTGCCAGGAGGTGGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TVLSGTLNDQLEGKEQLTLQKGH*CQEVVA Trigger: TGCCACCACCTCCTGGCATCAATGTCCTTTCTGCAA...CGTGAGCTGCTCTTTGCCCTCAAGTTGGTCATTCAGGGTTCCTGACAGAACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTGGTATTGGGACTGACTTCCTGGAAAGTTGCCCAAAGTTGTAAACACGGGGACTGCAGTGGTGAGTaGGGCCCAAGGGTTCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LLVLGLTSWKVAQSCKHGDCSGE*GPRVLN Trigger: GTTCAGAACCCTTGGGCCTCACTCACCACTGCAGTC...CCCGTGTTTACAACTTTGGGCAACTTTCCAGGAAGTCAGTCCCAATACCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGAAAGTTGCCCAAAGTTGTAAACACGGGATTGCTGATCTGTCCCCACCAGGCAAAAAGCCAGATGTaGCCCTTGACCTTGGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: PGKLPKVVNTGLLICPHQAKSQM*PLTLDP Trigger: AGGGTCCAAGGTCAAGGGTCACATCTGGCTTTTTGC...CTGGTGGGGACAGATCAGCAATCCCGTGTTTACAACTTTGGGCAACTTTCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CCA 90 bp | ATCCCACATCAGTACCTGAGTGCTCTTCGTTCTTCGGTGCAGGCTGACATTGCTCACGTGCTCCCATCTTaGAACACTTGCACTGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: IPHQYLSALRSSVQADIAHVLPS*NTCTAP Trigger: AGGAGCAGTGCAAGTGTTCCAAGATGGGAGCACGTG...AGCAATGTCAGCCTGCACCGAAGAACGAAGAGCACTCAGGTACTGATGTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCTTGAAGCCATGGGACGTGGGAAGCGGGTCTTaGCCACTTGGCCTGCCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ESTFDNQKSIFNILKPWDVGSGS*PLGLPF Trigger: GAAGGGCAGGCCAAGTGGTCAAGACCCGCTTCCCAC...GTCCCATGGCTTCAAGATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGAAAGTTGCCCAAAGTTGTAAACACGGGATTGCTGATCTGTCCCCACCAGCCATCTTGGAACACTTaGACTGCTCCTGTGCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: PGKLPKVVNTGLLICPHQPSWNT*TAPVLT Trigger: GGTAAGCACAGGAGCAGTGCAAGTGTTCCAAGATGG...CTGGTGGGGACAGATCAGCAATCCCGTGTTTACAACTTTGGGCAACTTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCTTGAAGCCATGGGACACGTGGAACAGGTGTTaGGGGGTAGGGGGAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ESTFDNQKSIFNILKPWDTWNRC*GVGGGR Trigger: TCTGCCTCCCCCTACCCCTCAACACCTGTTCCACGT...GTCCCATGGCTTCAAGATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCTTGAAGCCATGGGACCCCTGTCAGACAGAATaGGGTGGCAGAGGAGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ESTFDNQKSIFNILKPWDPCQTE*GGRGGR Trigger: CCTCCCTCCTCTGCCACCCCATTCTGTCTGACAGGG...GTCCCATGGCTTCAAGATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR GCA 90 bp | AACACGGGATTGCTGATCTGTCCCCACCAGGACATGATTCTAATGCTGGGGAAAGTGAGGTCTGAGCACTaGACAGACCTATTGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NTGLLICPHQDMILMLGKVRSEH*TDLLKE Trigger: TTCCTTCAATAGGTCTGTGCAGTGCTCAGACCTCAC...TTTCCCCAGCATTAGAATCATGTCCTGGTGGGGACAGATCAGCAATCCCGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCTTGAAGCCATGGGACTGGTCCCCAGAATCCTaGATGAAGGCTGCAGACGGG | + |
|
Preference number: 2 (lower is better) Translates to: ESTFDNQKSIFNILKPWDWSPES*MKAADG Trigger: CCCGTCTGCAGCCTTCATCCAGGATTCTGGGGACCA...GTCCCATGGCTTCAAGATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR CCA 90 bp | AACACGGGATTGCTGATCTGTCCCCACCAGGACATGATTCTAATGCTGGGGAAACCCTTCGTCCCACTCTaGCTTTTCACATATCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: NTGLLICPHQDMILMLGKPFVPL*LFTYPQ Trigger: TTGTGGATATGTGAAAAGCCAGAGTGGGACGAAGGG...TTTCCCCAGCATTAGAATCATGTCCTGGTGGGGACAGATCAGCAATCCCGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCTTGAAGCCATGGGACATGCTCAGATGGGCCTaGGCCAGAGCTGAATCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: ESTFDNQKSIFNILKPWDMLRWA*ARAESS Trigger: CGAGGATTCAGCTCTGGCCCAGGCCCATCTGAGCAT...GTCCCATGGCTTCAAGATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR GCA 90 bp | CATGTGTACCTTGCAACTCAAGACAGATCCTCATTTCAGCCCTTCAAAGGAGTACTAAGGGTACTGGGCTaGTCAGCAGACCACACTAAG | + |
|
Preference number: 2 (lower is better) Translates to: HVYLATQDRSSFQPFKGVLRVLG*SADHTK Trigger: CTTAGTGTGGTCTGCTGAGCAGCCCAGTACCCTTAG...TACTCCTTTGAAGGGCTGAAATGAGGATCTGTCTTGAGTTGCAAGGTACACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTACCTTGCAACTCAAGACAGATCCTCATTTCAGCCCTTCAAAGGAGTACCCAGCCAGGATGCATaGCTTTCTGGTCCAGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: HVYLATQDRSSFQPFKGVPSQDA*LSGPDF Trigger: GAAATCTGGACCAGAAAGCCATGCATCCTGGCTGGG...TACTCCTTTGAAGGGCTGAAATGAGGATCTGTCTTGAGTTGCAAGGTACACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 90 bp | GGGAGATGGTCAGAAGCCAGGAGTACAAAAGATGTGAAATGGATCTaGTGTGCCACCATCTCATCCATCTTGAAGGTGACCCACAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GRWSEARSTKDVKWI*CATISSILKVTHKK Trigger: TTTCTTGTGGGTCACCTTCAAGATGGATGAGATGGTGGCACACAAGATCCATTTCACATCTTTTGTACTCCTGGCTTCTGACCATCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGGGTCCACATGACTCAGGGCCCTCATTCAAGTACTGTATTGTGGACACAGGAGTACAAAAGATGTaGAATGGATCTTGTGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: FLGPHDSGPSFKYCIVDTGVQKM*NGSCVP Trigger: TGGCACACAAGATCCATTTCACATCTTTTGTACTCC...TGTGTCCACAATACAGTACTTGAATGAGGGCCCTGAGTCATGTGGACCCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR TCA 90 bp | TTGCTGGTATTGGGACTGACTTCCTGGAAAGTTGCCCAAAGTTGTAAACACGGGGCATCTTTAATATCTTaGAGCCATGGGACACAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: LLVLGLTSWKVAQSCKHGASLIS*SHGTQL Trigger: TAGCTGTGTCCCATGGCTTCAAGATATTAAAGATGC...CCCGTGTTTACAACTTTGGGCAACTTTCCAGGAAGTCAGTCCCAATACCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTACCTTGCAACTCAAGACAGATCCTCATTTCAGCCCTTCAAAGGAGTAAGAACTCTAGGAGGCTaGAAGAGGAGCATCAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: HVYLATQDRSSFQPFKGVRTLGG*KRSIKN Trigger: GTTCTTGATGCTCCTCTTCCAGCCTCCTAGAGTTCT...TACTCCTTTGAAGGGCTGAAATGAGGATCTGTCTTGAGTTGCAAGGTACACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR TCA 90 bp | ACCGAGAGAAAAGCAGAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCCCTATTGAAGGAACATaGTGTCTAGAGTGCCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TERKAESTFDNQKSIFNIPIEGT*CLECQC Trigger: GCACTGGCACTCTAGACATCATGTTCCTTCAATAGG...GATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTCTGCTTTTCTCTCGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR-3UTR GCA 90 bp | ACCGAGAGAAAAGCAGAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCGCAGACGGGTGTCCTTaGAAAAATAACTCTGAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TERKAESTFDNQKSIFNIADGCP*KNNSEP Trigger: AGGCTCAGAGTTATTTTTGCAAGGACACCCGTCTGC...GATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTCTGCTTTTCTCTCGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR GCA 72 bp | CCTCGGCTCTCTCACATGCCAGGATTGGCTGCCCTCTaGCGCCGTCCCACTGCCTGTGCCAGGGCACGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PRLSHMPGLAAL*RRPTACARARK Trigger: CTTGCGTGCCCTGGCACAGGCAGTGGGACGGCGGCAGAGGGCAGCCAATCCTGGCATGTGAGAGAGCCGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 72 bp | CAGCAGAGCTGGAGGACCTCTGTGGGAAGCGGGTCTTaGCCACTTGGCCTGCCCTTCGTCCCACTCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QQSWRTSVGSGS*PLGLPFVPLWL Trigger: AAGCCAGAGTGGGACGAAGGGCAGGCCAAGTGGTCAAGACCCGCTTCCCACAGAGGTCCTCCAGCTCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 72 bp | GGAGGTGGTGGCAGGGACTCTACGTCACCCTCTTGCTaGTCAGAGCAGGGACCCAGTAGCCAGGCCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GGGGRDSTSPSC*SEQGPSSQARG Trigger: TCCTCTGGCCTGGCTACTGGGTCCCTGCTCTGATCAGCAAGAGGGTGACGTAGAGTCCCTGCCACCACCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR GCA 72 bp | CCAGCTGAAGGTCAGCGAGGGCTAAGGGTACTGGGCTaGTCAGCAGACCACACTAAGCCTCTGGGCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PAEGQRGLRVLG*SADHTKPLGWL Trigger: GAGCCAGCCCAGAGGCTTAGTGTGGTCTGCTGAGCAGCCCAGTACCCTTAGCCCTCGCTGACCTTCAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 72 bp | GGCAGTGAGGAATGCTCAGGCCACCCTGCAGGAACTTaGGACAAGCCCACGGAGGAAGCCCAGCCACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSEECSGHPAGT*DKPTEEAQPLF Trigger: GAAGAGTGGCTGGGCTTCCTCCGTGGGCTTGTCTCAAGTTCCTGCAGGGTGGCCTGAGCATTCCTCACTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR GCA 72 bp | CCTGACCCGCCTCTTGTGCTCATGTGTTGGTGTGCATaGTCAGATGGGCCTGGGCCAGAGCTGAATCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: PDPPLVLMCWCA*SDGPGPELNPR Trigger: CCGAGGATTCAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAACACATGAGCACAAGAGGCGGGTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CCA 72 bp | GTGTGGGTACCTGACCCGCCTCTTGTGCTCATGTGTTaGTGTGCATGCTCAGATGGGCCTGGGCCAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VWVPDPPLVLMC*CACSDGPGPEL Trigger: CAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAACACATGAGCACAAGAGGCGGGTCAGGTACCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 72 bp | GTTGGTGTGCATGCTCAGATGGGCCTGGGCCAGAGCTaGATCCTCGGCTCTCTCACATGCCAGGATTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VGVHAQMGLGQS*ILGSLTCQDWL Trigger: CAGCCAATCCTGGCATGTGAGAGAGCCGAGGATTCAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR TCA 72 bp | CATGTGGGAGGACTCGAACCAGCCCAAGTCCTGATCTaGGGAACAACAGGTGAGTGGCCAGGTGCTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HVGGLEPAQVLI*GTTGEWPGAPG Trigger: CCCTGGAGCACCTGGCCACTCACCTGTTGTTCCTCAGATCAGGACTTGGGCTGGTTCGAGTCCTCCCACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | GGCTCTGGCAGCCTTTGGAGCCTAGACTCCCCGCAGTaGAGCTGTCCAACTATGCAGGCATTGGAGGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: GSGSLWSLDSPQ*SCPTMQALEDQ Trigger: TTGGTCCTCCAATGCCTGCATAGTTGGACAGCTCCACTGCGGGGAGTCTAGGCTCCAAAGGCTGCCAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR GCA 72 bp | GGACCTCTGTGGGAAGCGGGTCTTGACCACTTGGCCTaGCCTTCGTCCCACTCTGGCTTTTCACATATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPLWEAGLDHLA*PSSHSGFSHIH Trigger: GTGGATATGTGAAAAGCCAGAGTGGGACGAAGGGCAGGCCAAGTGGTCAAGACCCGCTTCCCACAGAGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | CTGGAGGACCTCTGTGGGAAGCGGGTCTTGACCACTTaGCCTGCCCTTCGTCCCACTCTGGCTTTTCACATA | + |
|
Preference number: 3 (lower is better) Translates to: LEDLCGKRVLTT*PALRPTLAFHI Trigger: TATGTGAAAAGCCAGAGTGGGACGAAGGGCAGGCCAAGTGGTCAAGACCCGCTTCCCACAGAGGTCCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | GCCTCTTGTGCTCATGTGTTGGTGTGCATGCTCAGATaGGCCTGGGCCAGAGCTGAATCCTCGGCTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASCAHVLVCMLR*AWARAESSALS Trigger: TGAGAGAGCCGAGGATTCAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAACACATGAGCACAAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | GGGGAGGCAGATGGGATAGCACCAGAGTGGCCCAGTTaGGCAGTATTGGCCAGGAGGAAGAGGCAGAGATAT | + |
|
Preference number: 3 (lower is better) Translates to: GEADGIAPEWPS*AVLARRKRQRY Trigger: ATATCTCTGCCTCTTCCTCCTGGCCAATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATCTGCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | AGTTCCCCAGACCTGGGCTGGGATCCCGAAGCTTGTTaGCACTGTTGTGCTAGGAGACCTCAGTCAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSPDLGWDPEAC*HCCARRPQSGS Trigger: AGAGCCTGACTGAGGTCTCCTAGCACAACAGTGCCAACAAGCTTCGGGATCCCAGCCCAGGTCTGGGGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCACATCAGTACCTGAGTGCTCTTCGTTCTTCGGTGCAGGCTGACATTGCTCTTGGCACCTCCACCTaGGGAAGCTGGCACACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IPHQYLSALRSSVQADIALGTST*GSWHTG Trigger: CCCTGTGTGCCAGCTTCCCAAGGTGGAGGTGCCAAG...AGCAATGTCAGCCTGCACCGAAGAACGAAGAGCACTCAGGTACTGATGTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCACATCAGTACCTGAGTGCTCTTCGTTCTTCGGTGCAGGCTGACATTGCTAGGCTCTGGCAGCCTTaGGAGCCTAGACTCCCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: IPHQYLSALRSSVQADIARLWQP*EPRLPA Trigger: TGCGGGGAGTCTAGGCTCCAAAGGCTGCCAGAGCCT...AGCAATGTCAGCCTGCACCGAAGAACGAAGAGCACTCAGGTACTGATGTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | CAGACCACACTAAGCCTCTGGGCTGGCTCCTGTAGGTaGATGCATGAGAAGGGAGTCCCTCTGACAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QTTLSLWAGSCR*MHEKGVPLTGN Trigger: GTTCCCTGTCAGAGGGACTCCCTTCTCATGCATTCACCTACAGGAGCCAGCCCAGAGGCTTAGTGTGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | GGCACAGTCAGTGGGACTTTAAGGCTGCCAAGGCAGTaGGGAATGCTCAGGCCACCCTGCAGGAACTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GTVSGTLRLPRQ*GMLRPPCRNLR Trigger: TCTCAAGTTCCTGCAGGGTGGCCTGAGCATTCCTCACTGCCTTGGCAGCCTTAAAGTCCCACTGACTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | AAGGACATGTGGGAGGACTCGAACCAGCCCAAGTCCTaGTCTGAGGAACAACAGGTGAGTGGCCAGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KDMWEDSNQPKS*SEEQQVSGQVL Trigger: GAGCACCTGGCCACTCACCTGTTGTTCCTCAGATCAGGACTTGGGCTGGTTCGAGTCCTCCCACATGTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR GCA 72 bp | GGCACCAGGGAGAACCACTTCCTACACAACCTATCTTaGCCTATTTCTTCGCTCTGGGGGCCCCTGACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTRENHFLHNLS*PISSLWGPLTS Trigger: TGAGGTCAGGGGCCCCCAGAGCGAAGAAATAGGGCAAGATAGGTTGTGTAGGAAGTGGTTCTCCCTGGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | CCCACTCTGGCTTTTCACATATCCACAACCAGCAGCTaGTCCCCAGAATCCTGGATGAAGGCTGCAGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: PTLAFHISTTSS*SPESWMKAADG Trigger: CCCGTCTGCAGCCTTCATCCAGGATTCTGGGGACCAGCTGCTGGTTGTGGATATGTGAAAAGCCAGAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | GAGGGATACAGATGGCAAAGTTCCCCAGACCTGGGCTaGGATCCCGAAGCTTGTTGGCACTGTTGTGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: EGYRWQSSPDLG*DPEACWHCCAR Trigger: CCTAGCACAACAGTGCCAACAAGCTTCGGGATCCCAGCCCAGGTCTGGGGAACTTTGCCATCTGTATCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | CTCCAGGAACACCCTCCTCATTTGCAGAAAGGACATTaGTGCCAGGAGGTGGTGGCAGGGACTCTACGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LQEHPPHLQKGH*CQEVVAGTLRH Trigger: GTGACGTAGAGTCCCTGCCACCACCTCCTGGCATCAATGTCCTTTCTGCAAATGAGGAGGGTGTTCCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | ACCATAAGGGTCTGTGCCCATGACTGCAGTGGTGAGTaGGGCCCAAGGGTTCTGAACTTAAGACCTCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TIRVCAHDCSGE*GPRVLNLRPPS Trigger: GCTGGGAGGTCTTAAGTTCAGAACCCTTGGGCCTCACTCACCACTGCAGTCATGGGCACAGACCCTTATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | AGTTGTGTGGGTTGCAGGCTGGTGACCCACTTAATCTaGCCCTGTCCCTTCAACTGCAGGACAGGCCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SCVGCRLVTHLI*PCPFNCRTGPV Trigger: TACTGGGCCTGTCCTGCAGTTGAAGGGACAGGGTCAGATTAAGTGGGTCACCAGCCTGCAACCCACACAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | TTGTGGCTAAGGCTTGGCACCTCCACCTTGGGAAGCTaGCACACAGGGTTCCTGTTGTTCTTCTTGGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LWLRLGTSTLGS*HTGFLLFFLAP Trigger: TGGAGCCAAGAAGAACAACAGGAACCCTGTGTGCCAGCTTCCCAAGGTGGAGGTGCCAAGCCTTAGCCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | ACAGAGAAAGGGTTAGCACTGGTTGTGGCTAAGGCTTaGCACCTCCACCTTGGGAAGCTGGCACACAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TEKGLALVVAKA*HLHLGKLAHRV Trigger: AACCCTGTGTGCCAGCTTCCCAAGGTGGAGGTGCCAAGCCTTAGCCACAACCAGTGCTAACCCTTTCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | TCCTGCAGAGTGGGAAGGTGTCTGTGCACAGATGTCTaGAGTAGCCTAAGCAGCAGTGGGGAGATGGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SCRVGRCLCTDV*SSLSSSGEMVR Trigger: TCTGACCATCTCCCCACTGCTGCTTAGGCTACTCCAGACATCTGTGCACAGACACCTTCCCACTCTGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | GTATGGAGGGATACAGATGGCAAAGTTCCCCAGACCTaGGCTGGGATCCCGAAGCTTGTTGGCACTGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VWRDTDGKVPQT*AGIPKLVGTVV Trigger: CACAACAGTGCCAACAAGCTTCGGGATCCCAGCCCAGGTCTGGGGAACTTTGCCATCTGTATCCCTCCATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGTGCTCATGTGTTGGTGTGCATGCTCAGATGGGCCTGGGCCAGAGCTGAACACACAGGGTTCCTGTaGTTCTTCTTGGCTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SCAHVLVCMLRWAWARAEHTGFL*FFLAPG Trigger: TCCTGGAGCCAAGAAGAACAACAGGAACCCTGTGTG...TTCAGCTCTGGCCCAGGCCCATCTGAGCATGCACACCAACACATGAGCACAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | CACTGCCACCGCAGCTGTCAGAGCAGTCAGCAATGTCTTCCTAGAGGCCCAGGGACCATCTCATCCATCTaGAAGGTGACCCACAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: HCHRSCQSSQQCLPRGPGTISSI*KVTHKK Trigger: TTTCTTGTGGGTCACCTTCAAGATGGATGAGATGGT...CCCTGGGCCTCTAGGAAGACATTGCTGACTGCTCTGACAGCTGCGGTGGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | CCCTTGTGGGTTAGGTCCCGTGTAAGGAGGACTGCATaGGCAGATTCCACGTGCTCCCATCTTGGAACACTT | + |
|
Preference number: 3 (lower is better) Translates to: PLWVRSRVRRTA*ADSTCSHLGTL Trigger: AAGTGTTCCAAGATGGGAGCACGTGGAATCTGCTCATGCAGTCCTCCTTACACGGGACCTAACCCACAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | CACATGACTCAGGGCCCTCATTCAAGTACTGTATTGTaGACACACTGCCACCGCAGCTGTCAGAGCAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HMTQGPHSSTVL*THCHRSCQSSQ Trigger: CTGACTGCTCTGACAGCTGCGGTGGCAGTGTGTCCACAATACAGTACTTGAATGAGGGCCCTGAGTCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | AACACGGGATTGCTGATCTGTCCCCACCAGGACATGATTCTAATGCTGGGGAAACTCTACGTCACCCTCTaGCTGATCAGAGCAGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: NTGLLICPHQDMILMLGKLYVTL*LIRAGT Trigger: GGTCCCTGCTCTGATCAGCAAGAGGGTGACGTAGAG...TTTCCCCAGCATTAGAATCATGTCCTGGTGGGGACAGATCAGCAATCCCGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGCAACATGTACCAGAAAGGCCATGCACTGAAGCAGTGCAGTGGTGGCCAATCCCTGTAAAGCTGTaGCCCAGCAATGAGGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GVQHVPERPCTEAVQWWPIPVKL*PSNEEC Trigger: ACACTCCTCATTGCTGGGCAACAGCTTTACAGGGAT...TGGCCACCACTGCACTGCTTCAGTGCATGGCCTTTCTGGTACATGTTGCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR GCA 72 bp | AGATTTCAGTACTCCTGCAGAGTGGGAAGGTGTCTGTaGACAGATGTCTGGAGTAGCCTAAGCAGCAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RFQYSCRVGRCL*TDVWSSLSSSG Trigger: CCCACTGCTGCTTAGGCTACTCCAGACATCTGTGCACAGACACCTTCCCACTCTGCAGGAGTACTGAAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR GCA 72 bp | CCCAAGGGTTCTGAACTTAAGACCTCCCAGCCAGGATaGATGGCTTTCTGGTCCAGATTTCAGTACTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PKGSELKTSQPG*MAFWSRFQYSC Trigger: GCAGGAGTACTGAAATCTGGACCAGAAAGCCATGCATCCTGGCTGGGAGGTCTTAAGTTCAGAACCCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | CACATATCCACAACCAGCAGCTGGTCCCCAGAATCCTaGATGAAGGCTGCAGACGGGTGTCCTTGCAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HISTTSSWSPES*MKAADGCPCKN Trigger: ATTTTTGCAAGGACACCCGTCTGCAGCCTTCATCCAGGATTCTGGGGACCAGCTGCTGGTTGTGGATATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | TGGCTTTCTGGTCCAGATTTCAGTACTCCTGCAGAGTaGGAAGGTGTCTGTGCACAGATGTCTGGAGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLSGPDFSTPAE*EGVCAQMSGVA Trigger: GGCTACTCCAGACATCTGTGCACAGACACCTTCCCACTCTGCAGGAGTACTGAAATCTGGACCAGAAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | TATCCACAACCAGCAGCTGGTCCCCAGAATCCTGGATaGAGGCTGCAGACGGGTGTCCTTGCAAAAATAACT | + |
|
Preference number: 3 (lower is better) Translates to: YPQPAAGPQNPG*RLQTGVLAKIT Trigger: AGTTATTTTTGCAAGGACACCCGTCTGCAGCCTTCATCCAGGATTCTGGGGACCAGCTGCTGGTTGTGGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | AGGCAGAGATATAGTTATTGCTACACCGCAAGGCTATaGAGCCTCCGGGGCACAGTCAGTGGGACTTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RQRYSYCYTARL*SLRGTVSGTLR Trigger: CCTTAAAGTCCCACTGACTGTGCCCCGGAGGCTTCATAGCCTTGCGGTGTAGCAATAACTATATCTCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | AGAGCAGCTCACGAATCAGAGGCTAGTATGGCACCATaGCTTCTAGGAATCCCTGTAAAGCTGTTGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RAAHESEASMAP*LLGIPVKLLPS Trigger: GCTGGGCAACAGCTTTACAGGGATTCCTAGAAGTCATGGTGCCATACTAGCCTCTGATTCGTGAGCTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | CTCTTTGCCACAGACAGTGTAGCAAAAAGCCAGATGTaGCCCTTGACCTTGGACCCTCTAGCCTTGGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: LFATDSVAKSQM*PLTLDPLALGI Trigger: GATTCCCAAGGCTAGAGGGTCCAAGGTCAAGGGTCACATCTGGCTTTTTGCTACACTGTCTGTGGCAAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | AGGGTTCTGAACTTAAGACCTCCCAGCCAGGATGCATaGCTTTCTGGTCCAGATTTCAGTACTCCTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RVLNLRPPSQDA*LSGPDFSTPAE Trigger: CTCTGCAGGAGTACTGAAATCTGGACCAGAAAGCCATGCATCCTGGCTGGGAGGTCTTAAGTTCAGAACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTGCAACATGTACCAGAAAGGCCATGCACTGAAGCAGTGCAGTGGTGGCCAAGCATCTTTAATATCTaGAAGCCATGGGACACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GVQHVPERPCTEAVQWWPSIFNI*KPWDTA Trigger: AGCTGTGTCCCATGGCTTCAAGATATTAAAGATGCT...TGGCCACCACTGCACTGCTTCAGTGCATGGCCTTTCTGGTACATGTTGCACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR GCA 72 bp | ACTGTGAAGGGTGTCTGGCTAACCTTCCTTGCTCTTTaGCACAGACAGTGTAGCAAAAAGCCAGATGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: TVKGVWLTFLAL*HRQCSKKPDVT Trigger: GGTCACATCTGGCTTTTTGCTACACTGTCTGTGGCAAAGAGCAAGGAAGGTTAGCCAGACACCCTTCACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | GGAGTGCTCCTGTTCATAAGCCAGACTTCTGAATGCTaGCCATGTGTACCTTGCAACTCAAGACAGATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GVLLFISQTSEC*PCVPCNSRQIL Trigger: GAGGATCTGTCTTGAGTTGCAAGGTACACATGGCCAGCATTCAGAAGTCTGGCTTATGAACAGGAGCACTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCTTGAAGCCATGGGACCCACGTGCTCCCATCTaGGAACACTTGCACTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ESTFDNQKSIFNILKPWDPRAPI*EHLHCS Trigger: GGAGCAGTGCAAGTGTTCCAAGATGGGAGCACGTGG...GTCCCATGGCTTCAAGATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGTACCTTGCAACTCAAGACAGATCCTCATTTCAGCCCTTCAAAGGAGTATTCCTGTTGTTCTTCTaGGCTCCAGGAACACCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HVYLATQDRSSFQPFKGVFLLFF*APGTPS Trigger: GGAGGGTGTTCCTGGAGCCAAGAAGAACAACAGGAA...TACTCCTTTGAAGGGCTGAAATGAGGATCTGTCTTGAGTTGCAAGGTACACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR TCA 72 bp | GTATTACTGAGGTCATTTGTTTCCCAAGTAGACATCTaGCCACAATACACAAGCTGGGGACTACCGAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VLLRSFVSQVDI*PQYTSWGLPRG Trigger: ACCCCTCGGTAGTCCCCAGCTTGTGTATTGTGGTCAGATGTCTACTTGGGAAACAAATGACCTCAGTAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGCACCTTTGACAACCAGAAAAGCATCTTTAATATCTTGAAGCCATGGGACTCTTGTGCTCATGTGTaGGTGTGCATGCTCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: ESTFDNQKSIFNILKPWDSCAHV*VCMLRW Trigger: CCATCTGAGCATGCACACCAACACATGAGCACAAGA...GTCCCATGGCTTCAAGATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR GCA 72 bp | AGCCAGGAGTACAAAAGATGTGAAATGGATCTTGTGTaGCACCATCTCATCCATCTTGAAGGTGACCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: SQEYKRCEMDLV*HHLIHLEGDPQ Trigger: TTGTGGGTCACCTTCAAGATGGATGAGATGGTGGCACACAAGATCCATTTCACATCTTTTGTACTCCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CCA 72 bp | GTTAACCATTACTGCATTGTTACTGTGAAGGGTGTCTaGCTAACCTTCCTTGCTCTTTGCCACAGACAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VNHYCIVTVKGV*LTFLALCHRQC Trigger: ACACTGTCTGTGGCAAAGAGCAAGGAAGGTTAGCCAGACACCCTTCACAGTAACAATGCAGTAATGGTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR GCA 90 bp | AAGCCCACGGAGGAAGCCCAGCCACTCTTCTTGGGTCCACATGACTCAGGGCCCCGGCGTTGGCGGTCGTaGTCCACGCGGATGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPTEEAQPLFLGPHDSGPRRWRS*STRMGP Trigger: CGGCCCCATCCGCGTGGAGCACGACCGCCAACGCCG...GGGCCCTGAGTCATGTGGACCCAAGAAGAGTGGCTGGGCTTCCTCCGTGGGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGCAGAGCTGGAGGACCTCTGTGGGAAGCGGGTCTTGACCACTTGGCCTCGTGCTCCACGCGGATaGGGCCGCCCTGCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSAELEDLCGKRVLTTWPRAPRG*GRPAPV Trigger: CACTGGAGCAGGGCGGCCCCATCCGCGTGGAGCACG...AGGCCAAGTGGTCAAGACCCGCTTCCCACAGAGGTCCTCCAGCTCTGCTGAGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGGGGGAGGCAGATGGGATAGCACCAGAGTGGCCCAGTTGGGCAGTATTGCAGCCTTGGCCAGGTaGTTGGCAATGCCACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRWDSTRVAQLGSIAALAR*LAMPRP Trigger: TGGGCGTGGCATTGCCAAGCACCTGGCCAAGGCTGC...AATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATCTGCCTCCCCCTACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | TCAGCAGAGCTGGAGGACCTCTGTGGGAAGCGGGTCTaGACCACTTGGCCTGCCCTTCGTCCCACTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAELEDLCGKRV*TTWPALRPTLA Trigger: AGCCAGAGTGGGACGAAGGGCAGGCCAAGTGGTCAAGACCCGCTTCCCACAGAGGTCCTCCAGCTCTGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR GCA 90 bp | GGGGTAGGGGGAGGCAGATGGGATAGCACCAGAGTGGCCCAGTTGGGCAGTATTCCAGGTGCTTGGCAATaGCACGCCCACGGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRWDSTRVAQLGSIPGAWQ*HAHGKH Trigger: ATGCTTACCGTGGGCGTGGCATTGCCAAGCACCTGG...AATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATCTGCCTCCCCCTACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | GGGGGAGGCAGATGGGATAGCACCAGAGTGGCCCAGTaGGGCAGTATTGGCCAGGAGGAAGAGGCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GGGRWDSTRVAQ*GSIGQEEEAEI Trigger: TATCTCTGCCTCTTCCTCCTGGCCAATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATCTGCCTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | GGGCACCAGGGAGAACCACTTCCTACACAACCTATCTaGCCCTATTTCTTCGCTCTGGGGGCCCCTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHQGEPLPTQPI*PYFFALGAPDL Trigger: GAGGTCAGGGGCCCCCAGAGCGAAGAAATAGGGCAAGATAGGTTGTGTAGGAAGTGGTTCTCCCTGGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCCCTTCAACTGCAGGACAGGCCCAGTAAGTGGTGTCTCTTGGGAATTGTACCAGCAGGTGAGGTaGGCCTTCAGGTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCPFNCRTGPVSGVSWELYQQVR*AFRSSS Trigger: GGAGGAAGACCTGAAGGCCCACCTCACCTGCTGGTA...CAATTCCCAAGAGACACCACTTACTGGGCCTGTCCTGCAGTTGAAGGGACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR CCA 90 bp | ACCCTCCTCATTTGCAGAAAGGACATTGATGCCAGGAGGTGGTGGCAGGGACTCGCGCTCCAGGTACTGTaGCAGAGGGTTCTCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLICRKDIDARRWWQGLALQVL*QRVLLD Trigger: GTCAAGGAGAACCCTCTGCCACAGTACCTGGAGCGC...GAGTCCCTGCCACCACCTCCTGGCATCAATGTCCTTTCTGCAAATGAGGAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | CCAAACAGTGTGGAGTGTGGGTACCTGACCCGCCTCTaGTGCTCATGTGTTGGTGTGCATGCTCAGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PNSVECGYLTRL*CSCVGVHAQMG Trigger: GCCCATCTGAGCATGCACACCAACACATGAGCACAAGAGGCGGGTCAGGTACCCACACTCCACACTGTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTCACATATCCACAACCAGCAGCTGGTCCCCAGAATCCTGGATGAAGGCGGGACCTCTGTGTGTTaGAGGTCCACGATCCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSHIHNQQLVPRILDEGGTSVC*RSTIRL Trigger: CAAGCGGATCGTGGACCTGCAACACACAGAGGTCCC...GCCTTCATCCAGGATTCTGGGGACCAGCTGCTGGTTGTGGATATGTGAAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR CCA 90 bp | CCATGTGTACCTTGCAACTCAAGACAGATCCTCATTTCAGCCCTTCAAAGGAGTGAGAACTGGCGGCGTTaGCGGTCGTGCTCCACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PCVPCNSRQILISALQRSENWRR*RSCSTR Trigger: CCGCGTGGAGCACGACCGCCAACGCCGCCAGTTCTC...ACTCCTTTGAAGGGCTGAAATGAGGATCTGTCTTGAGTTGCAAGGTACACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGGGGGAGGCAGATGGGATAGCACCAGAGTGGCCCAGTTGGGCAGTATTTCCTTGACATACTTCTaGATGTACCAGCAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGGRWDSTRVAQLGSISLTYF*MYQQVR Trigger: CCTCACCTGCTGGTACATCCAGAAGTATGTCAAGGA...AATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATCTGCCTCCCCCTACCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | GCTCCAGGAACACCCTCCTCATTTGCAGAAAGGACATaGATGCCAGGAGGTGGTGGCAGGGACTCTACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: APGTPSSFAERT*MPGGGGRDSTS Trigger: TGACGTAGAGTCCCTGCCACCACCTCCTGGCATCAATGTCCTTTCTGCAAATGAGGAGGGTGTTCCTGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR TCA 90 bp | ACAGTTCTGTCAGGAACCCTGAATGACCAACTTGAGGGCAAAGAGCAGCTCACGGGATGTACCAGCAGGTaGGGTGGGCCTTCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVLSGTLNDQLEGKEQLTGCTSR*GGPSGL Trigger: AAGACCTGAAGGCCCACCTCACCTGCTGGTACATCC...CGTGAGCTGCTCTTTGCCCTCAAGTTGGTCATTCAGGGTTCCTGACAGAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGTATTGGGACTGACTTCCTGGAAAGTTGCCCAAAGTTGTAAACACGGGCCTTGGCCAGGTGCTTaGCAATGCCACGCCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLGLTSWKVAQSCKHGPWPGA*QCHAHG Trigger: ACCGTGGGCGTGGCATTGCCAAGCACCTGGCCAAGG...CCCGTGTTTACAACTTTGGGCAACTTTCCAGGAAGTCAGTCCCAATACCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | GGAGGACTGCATGAGCAGATTCCACGTGCTCCCATCTaGGAACACTTGCACTGCTCCTGTGCTTACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GGLHEQIPRAPI*EHLHCSCAYQQ Trigger: CTGTTGGTAAGCACAGGAGCAGTGCAAGTGTTCCAAGATGGGAGCACGTGGAATCTGCTCATGCAGTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | TTGGGAAGCTGGCACACAGGGTTCCTGTTGTTCTTCTaGGCTCCAGGAACACCCTCCTCATTTGCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSWHTGFLLFF*APGTPSSFAER Trigger: CCTTTCTGCAAATGAGGAGGGTGTTCCTGGAGCCAAGAAGAACAACAGGAACCCTGTGTGCCAGCTTCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | GATGGGATAGCACCAGAGTGGCCCAGTTGGGCAGTATaGGCCAGGAGGAAGAGGCAGAGATATAGTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DGIAPEWPSWAV*ARRKRQRYSYC Trigger: GCAATAACTATATCTCTGCCTCTTCCTCCTGGCCAATACTGCCCAACTGGGCCACTCTGGTGCTATCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGTACTGTATTGTGGACACACTGCCACCGCAGCTGTCAGAGCAGTCAGCGCAGAGGGTTCTCCTTaGCATACTTCTGGATGTACC | + |
|
Preference number: 4 (lower is better) Translates to: IQVLYCGHTATAAVRAVSAEGSP*HTSGCT Trigger: GGTACATCCAGAAGTATGTCAAGGAGAACCCTCTGC...GCTGACTGCTCTGACAGCTGCGGTGGCAGTGTGTCCACAATACAGTACTTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
||
| 3UTR CAA 72 bp | GTGAAATGGATCTTGTGTGCCACCATCTCATCCATCTaGAAGGTGACCCACAAGAAAGGCCCTGACAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKWILCATISSI*KVTHKKGPDKS Trigger: GGACTTGTCAGGGCCTTTCTTGTGGGTCACCTTCAAGATGGATGAGATGGTGGCACACAAGATCCATTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CAA 72 bp | CTCTGGGGGCCCCTGACCTCACTGTGCCTTAGTCTTTaGTCAGTGACCAACAGGATCATGCAATGTATTCAA | + |
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Preference number: 4 (lower is better) Translates to: LWGPLTSLCLSL*SVTNRIMQCIQ Trigger: TTGAATACATTGCATGATCCTGTTGGTCACTGACAAAAGACTAAGGCACAGTGAGGTCAGGGGCCCCCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS-3UTR GCA 90 bp | CCATGTGTACCTTGCAACTCAAGACAGATCCTCATTTCAGCCCTTCAAAGGAGTGGTCCACGATCCGCTTaGCCACATACTCATAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PCVPCNSRQILISALQRSGPRSA*PHTHRA Trigger: TGCTCTATGAGTATGTGGGCAAGCGGATCGTGGACC...ACTCCTTTGAAGGGCTGAAATGAGGATCTGTCTTGAGTTGCAAGGTACACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CAA 72 bp | TCAGAAGCCAGGAGTACAAAAGATGTGAAATGGATCTaGTGTGCCACCATCTCATCCATCTTGAAGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: SEARSTKDVKWI*CATISSILKVT Trigger: GGTCACCTTCAAGATGGATGAGATGGTGGCACACAAGATCCATTTCACATCTTTTGTACTCCTGGCTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| 3UTR CAA 72 bp | AGCACCTTTGACAACCAGAAAAGCATCTTTAATATCTaGAAGCCATGGGACACAGCTAAAACCCATAAATGT | + |
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Preference number: 4 (lower is better) Translates to: STFDNQKSIFNI*KPWDTAKTHKC Trigger: ACATTTATGGGTTTTAGCTGTGTCCCATGGCTTCAAGATATTAAAGATGCTTTTCTGGTTGTCAAAGGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CCA 90 bp | AGCCTTGGCCAGGTGCTTGGCAATGCCACGCCCACGGTAAGCATCTaGGACCTCTGTGTGTTGCAGGTCCACGATCCGCTTGCCCACATA | + |
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Preference number: 5 (lower is better) Translates to: SLGQVLGNATPTVSI*DLCVLQVHDPLAHI Trigger: TATGTGGGCAAGCGGATCGTGGACCTGCAACACACAGAGGTCCCAGATGCTTACCGTGGGCGTGGCATTGCCAAGCACCTGGCCAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS-3UTR CAA 90 bp | ATCCCACATCAGTACCTGAGTGCTCTTCGTTCTTCGGTGCAGGCTGACATTGCTGGAGAACTGGCGGCGTaGGCGGTCGTGCTCCACGCG | + |
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Preference number: 5 (lower is better) Translates to: IPHQYLSALRSSVQADIAGELAA*AVVLHA Trigger: CGCGTGGAGCACGACCGCCAACGCCGCCAGTTCTCC...AGCAATGTCAGCCTGCACCGAAGAACGAAGAGCACTCAGGTACTGATGTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CCA 90 bp | AGGCGCTCCAGGTACTGTGGCAGAGGGTTCTCCTTGACATACTTCTaGATGTACCAGCAGGTGAGGTGGGCCTTCAGGTCTTCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: RRSRYCGRGFSLTYF*MYQQVRWAFRSSST Trigger: GGTGGAGGAAGACCTGAAGGCCCACCTCACCTGCTGGTACATCCAGAAGTATGTCAAGGAGAACCCTCTGCCACAGTACCTGGAGCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS-3UTR CAA 90 bp | AAGCCCACGGAGGAAGCCCAGCCACTCTTCTTGGGTCCACATGACTCAGGGCCCGGCAGAGGGTTCTCCTaGACATACTTCTGGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: KPTEEAQPLFLGPHDSGPGRGFS*TYFWMY Trigger: GTACATCCAGAAGTATGTCAAGGAGAACCCTCTGCC...GGGCCCTGAGTCATGTGGACCCAAGAAGAGTGGCTGGGCTTCCTCCGTGGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CCA 90 bp | AGAGGGTTCTCCTTGACATACTTCTGGATGTACCAGCAGGTGAGGTaGGCCTTCAGGTCTTCCTCCACCACGAAGTCCAGGGCAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RGFSLTYFWMYQQVR*AFRSSSTTKSRAAL Trigger: CAAGGCTGCCCTGGACTTCGTGGTGGAGGAAGACCTGAAGGCCCACCTCACCTGCTGGTACATCCAGAAGTATGTCAAGGAGAACCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS-3UTR CAA 90 bp | TTCTTGGGTCCACATGACTCAGGGCCCTCATTCAAGTACTGTATTGTGGACACAGCCTTGGCCAGGTGCTaGGCAATGCCACGCCCACGG | + |
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Preference number: 5 (lower is better) Translates to: FLGPHDSGPSFKYCIVDTALARC*AMPRPR Trigger: CCGTGGGCGTGGCATTGCCAAGCACCTGGCCAAGGC...TGTGTCCACAATACAGTACTTGAATGAGGGCCCTGAGTCATGTGGACCCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS GCA 90 bp | GGTAAGCATCTGGGACCTCTGTGTGTTGCAGGTCCACGATCCGCTTaGCCACATACTCATAGAGCAGGACAGCTCGGTCATGACATCCGT | + |
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Preference number: 5 (lower is better) Translates to: GKHLGPLCVAGPRSA*PHTHRAGQLGHDIR Trigger: ACGGATGTCATGACCGAGCTGTCCTGCTCTATGAGTATGTGGGCAAGCGGATCGTGGACCTGCAACACACAGAGGTCCCAGATGCTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS-3UTR CAA 90 bp | CCTGGAAAGTTGCCCAAAGTTGTAAACACGGGATTGCTGATCTGTCCCCACCAGAAGTCCAGGGCAGCCTaGGCCAGGTGCTTGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: PGKLPKVVNTGLLICPHQKSRAA*ARCLAM Trigger: CATTGCCAAGCACCTGGCCAAGGCTGCCCTGGACTT...CTGGTGGGGACAGATCAGCAATCCCGTGTTTACAACTTTGGGCAACTTTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS-3UTR CAA 90 bp | CCTGGAAAGTTGCCCAAAGTTGTAAACACGGGATTGCTGATCTGTCCCCACCAGTGGGACCTCTGTGTGTaGCAGGTCCACGATCCGCTT | + |
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Preference number: 5 (lower is better) Translates to: PGKLPKVVNTGLLICPHQWDLCV*QVHDPL Trigger: AAGCGGATCGTGGACCTGCAACACACAGAGGTCCCA...CTGGTGGGGACAGATCAGCAATCCCGTGTTTACAACTTTGGGCAACTTTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CAA 90 bp | AGCTCGGTCATGACATCCGTTGAGGCGCACGGAGAACTGGCGGCGTaGGCGGTCGTGCTCCACGCGGATGGGGCCGCCCTGCTCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSVMTSVEAHGELAA*AVVLHADGAALLQC Trigger: GCACTGGAGCAGGGCGGCCCCATCCGCGTGGAGCACGACCGCCAACGCCGCCAGTTCTCCGTGCGCCTCAACGGATGTCATGACCGAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CAA 72 bp | ATGACATCCGTTGAGGCGCACGGAGAACTGGCGGCGTaGGCGGTCGTGCTCCACGCGGATGGGGCCGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: MTSVEAHGELAA*AVVLHADGAAL Trigger: CAGGGCGGCCCCATCCGCGTGGAGCACGACCGCCAACGCCGCCAGTTCTCCGTGCGCCTCAACGGATGTCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CCA 72 bp | CAGGTGCTTGGCAATGCCACGCCCACGGTAAGCATCTaGGACCTCTGTGTGTTGCAGGTCCACGATCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: QVLGNATPTVSI*DLCVLQVHDPL Trigger: AAGCGGATCGTGGACCTGCAACACACAGAGGTCCCAGATGCTTACCGTGGGCGTGGCATTGCCAAGCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CAA 90 bp | CTTGGCAATGCCACGCCCACGGTAAGCATCTGGGACCTCTGTGTGTaGCAGGTCCACGATCCGCTTGCCCACATACTCATAGAGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LGNATPTVSIWDLCV*QVHDPLAHILIEQD Trigger: GTCCTGCTCTATGAGTATGTGGGCAAGCGGATCGTGGACCTGCAACACACAGAGGTCCCAGATGCTTACCGTGGGCGTGGCATTGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CAA 72 bp | GCCACGCCCACGGTAAGCATCTGGGACCTCTGTGTGTaGCAGGTCCACGATCCGCTTGCCCACATACTCATA | + |
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Preference number: 6 (lower is better) Translates to: ATPTVSIWDLCV*QVHDPLAHILI Trigger: TATGAGTATGTGGGCAAGCGGATCGTGGACCTGCAACACACAGAGGTCCCAGATGCTTACCGTGGGCGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS GCA 72 bp | CTGGGACCTCTGTGTGTTGCAGGTCCACGATCCGCTTaGCCACATACTCATAGAGCAGGACAGCTCGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LGPLCVAGPRSA*PHTHRAGQLGH Trigger: ATGACCGAGCTGTCCTGCTCTATGAGTATGTGGGCAAGCGGATCGTGGACCTGCAACACACAGAGGTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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| CDS CCA 72 bp | AGGTACTGTGGCAGAGGGTTCTCCTTGACATACTTCTaGATGTACCAGCAGGTGAGGTGGGCCTTCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RYCGRGFSLTYF*MYQQVRWAFRS Trigger: AGACCTGAAGGCCCACCTCACCTGCTGGTACATCCAGAAGTATGTCAAGGAGAACCCTCTGCCACAGTACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019075.4 |
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