Pregenerated sensors for NAT8F6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079495

Ensembl transcript IDs: ENSMUST00000087656.5, ENSMUST00000174143.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	CATCTTTTGATACATATCCAGCTAGAGTCAAGAGCTCCAGGGTACTaGTTAGTTCATATTGTGTTACTTTTTATACATGGCGTTATGTTA	+
Preference number: 1 (lower is better) Translates to: HLLIHIQLESRAPGY*LVHIVLLFIHGVML Trigger: TAACATAACGCCATGTATAAAAAGTAACACAATATGAACTAACCAGTACCCTGGAGCTCTTGACTCTAGCTGGATATGTATCAAAAGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174143.2
3UTR-3UTR CCA 90 bp	CCCACCCACTCCCACCTTTTGGCCCTGGCATTTCCCTGTACTGGGGCATATAAAAGAGCTCCAGGGTACTaGTTAGTTCATATTGTGTTA	+
Preference number: 2 (lower is better) Translates to: PTHSHLLALAFPCTGAYKRAPGY*LVHIVL Trigger: TAACACAATATGAACTAACCAGTACCCTGGAGCTCT...TTTATATGCCCCAGTACAGGGAAATGCCAGGGCCAAAAGGTGGGAGTGGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174143.2
3UTR CCA 72 bp	ATACATATCCAGCTAGAGTCAAGAGCTCCAGGGTACTaGTTAGTTCATATTGTGTTACTTTTTATACATGGC	+
Preference number: 3 (lower is better) Translates to: IHIQLESRAPGY*LVHIVLLFIHG Trigger: GCCATGTATAAAAAGTAACACAATATGAACTAACCAGTACCCTGGAGCTCTTGACTCTAGCTGGATATGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174143.2
CDS-3UTR GCA 90 bp	AGAGCTCCAGGGTACTGGTTAGTTCATATTGTGTTACTTTTTATACATGGCGTTAAGGTAGCGGGGATGTaGTCCTCCATGCCTCTGCGG	+
Preference number: 4 (lower is better) Translates to: RAPGYWLVHIVLLFIHGVKVAGM*SSMPLR Trigger: CCGCAGAGGCATGGAGGAGCACATCCCCGCTACCTT...AACGCCATGTATAAAAAGTAACACAATATGAACTAACCAGTACCCTGGAGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174143.2
CDS-3UTR CAA 90 bp	TCAAGAGCTCCAGGGTACTGGTTAGTTCATATTGTGTTACTTTTTATACATGGCCTGCATCTGTGCAAATaGGAGGACAGTCCTGACCAT	+
Preference number: 5 (lower is better) Translates to: SRAPGYWLVHIVLLFIHGLHLCK*EDSPDH Trigger: ATGGTCAGGACTGTCCTCCAATTTGCACAGATGCAG...GCCATGTATAAAAAGTAACACAATATGAACTAACCAGTACCCTGGAGCTCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174143.2
CDS CCA 72 bp	AGTAAGAGCAGGAGGGTTCGGGGCAGCAGCAGCATGTaGCGAAAGGTAGCGGGGATGTGCTCCTCCATGCCT	+
Preference number: 6 (lower is better) Translates to: SKSRRVRGSSSM*RKVAGMCSSMP Trigger: AGGCATGGAGGAGCACATCCCCGCTACCTTTCGCCACATGCTGCTGCTGCCCCGAACCCTCCTGCTCTTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087656.5 ENSMUST00000174143.2

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