Pregenerated sensors for NAT8F5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079494Ensembl transcript IDs: ENSMUST00000032074.5
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCAGCAGCAGCGTGTAGCGGAAGGCAGCAGGGATGTGCTCCATCATaGCCCTGGAGAACAAGCCCACAACCAGTTTATAGTCCCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: AAAACSGRQQGCAPS*PWRTSPQPVYSPSP Trigger: AGGAGAGGGACTATAAACTGGTTGTGGGCTTGTTCTCCAGGGGCATGATGGAGCACATCCCTGCTGCCTTCCGCTACACGCTGCTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032074.5 |
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| CDS TCA 72 bp | CCATGTCTGTCTGCAAACACTGGGCCACATAGTCCTTaGAGGGCTGTCCGGCAAGGAGCCGCAGGAGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PCLSANTGPHSP*RAVRQGAAGVG Trigger: TCCTACTCCTGCGGCTCCTTGCCGGACAGCCCTTCAAGGACTATGTGGCCCAGTGTTTGCAGACAGACATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032074.5 |
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| CDS GCA 72 bp | GCGTGTAGCGGAAGGCAGCAGGGATGTGCTCCATCATaGCCCTGGAGAACAAGCCCACAACCAGTTTATAGT | + |
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Preference number: 6 (lower is better) Translates to: ACSGRQQGCAPS*PWRTSPQPVYS Trigger: ACTATAAACTGGTTGTGGGCTTGTTCTCCAGGGGCATGATGGAGCACATCCCTGCTGCCTTCCGCTACACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032074.5 |
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| CDS CCA 72 bp | AGCGGAAGGCAGCAGGGATGTGCTCCATCATGCCCCTaGAGAACAAGCCCACAACCAGTTTATAGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SGRQQGCAPSCP*RTSPQPVYSPS Trigger: AGAGGGACTATAAACTGGTTGTGGGCTTGTTCTCCAGGGGCATGATGGAGCACATCCCTGCTGCCTTCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032074.5 |
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| CDS TCA 72 bp | ATCCCCTGTCCTCGATGTTGTGAGGACACAGACAGGTaGAACAGCTGCATCTGCTTCCTCCCTAATGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: IPCPRCCEDTDR*NSCICFLPNGG Trigger: TCCTCCATTAGGGAGGAAGCAGATGCAGCTGTTTCACCTGTCTGTGTCCTCACAACATCGAGGACAGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032074.5 |
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