Pregenerated sensors for NAT8F4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068299Ensembl transcript IDs: ENSMUST00000095757.4, ENSMUST00000159755.8
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGGGATCATTCCACTAGGAGAGGCCATTCAAAGTTACTCTCACTaGATCAGAGGTCCCCTTCCTCCCTCTGCACAGAGGTGGCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: GGIIPLGEAIQSYSH*IRGPLPPSAQRWLR Trigger: CCTAAGCCACCTCTGTGCAGAGGGAGGAAGGGGACCTCTGATGCAGTGAGAGTAACTTTGAATGGCCTCTCCTAGTGGAATGATCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR GCA 90 bp | GCCCTGGGGTTCCTAAGAGGCTTCTCTCTGCTGATAAATGTTTACTaGCTGGGTGACATCAGAGAGGAACGCTCTCCAGAGTCTCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: ALGFLRGFSLLINVY*LGDIREERSPESPE Trigger: CTCAGGAGACTCTGGAGAGCGTTCCTCTCTGATGTCACCCAGGCAGTAAACATTTATCAGCAGAGAGAAGCCTCTTAGGAACCCCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR TCA 90 bp | GCACACAAGGCTTTTCCAGGTCAGTCTCTTGATTCTTCCATGTCCTaGAACCAAAGTATATCATGTCCTCAGCAAGGAGTTCTCCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: AHKAFPGQSLDSSMS*NQSISCPQQGVLQF Trigger: GAACTGGAGAACTCCTTGCTGAGGACATGATATACTTTGGTTTCAGGACATGGAAGAATCAAGAGACTGACCTGGAAAAGCCTTGTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR TCA 90 bp | ACTAGAAACCCAGCGAGCACACAAGGCTTTTCCAGGTCAGTCTCTTaGTTCTTCCATGTCCTGAAACCAAAGTATATCATGTCCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: TRNPASTQGFSRSVS*FFHVLKPKYIMSSA Trigger: TGCTGAGGACATGATATACTTTGGTTTCAGGACATGGAAGAATCAAGAGACTGACCTGGAAAAGCCTTGTGTGCTCGCTGGGTTTCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR TCA 90 bp | GCAATTGTACAAGTTATGAGTCTTTGGAGTGACCATCTCCCACTGTaGAAAGGCTCCCAATTACAAGTGACACTGGAACAGCAGTCATTG | + |
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Preference number: 1 (lower is better) Translates to: AIVQVMSLWSDHLPL*KGSQLQVTLEQQSL Trigger: CAATGACTGCTGTTCCAGTGTCACTTGTAATTGGGAGCCTTTTCACAGTGGGAGATGGTCACTCCAAAGACTCATAACTTGTACAATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CCA 90 bp | GCCTTGGACATATACATCTATTTTCTTCCATCTATGGCCCAATATTaGGCTATATCAAAGGATCAGTCACGTATTCTCTGCAATTGTACA | + |
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Preference number: 1 (lower is better) Translates to: ALDIYIYFLPSMAQY*AISKDQSRILCNCT Trigger: TGTACAATTGCAGAGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATATGTCCAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CCA 90 bp | AACTCTTCCAAGCCTTGGACATATACATCTATTTTCTTCCATCTATaGCCCAATATTGGGCTATATCAAAGGATCAGTCACGTATTCTCT | + |
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Preference number: 1 (lower is better) Translates to: NSSKPWTYTSIFFHL*PNIGLYQRISHVFS Trigger: AGAGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATATGTCCAAGGCTTGGAAGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CCA 90 bp | GATCTTAAATCTTTATGCATCCGCTTCCATAACTCTTCCAAGCCTTaGACATATACATCTATTTTCTTCCATCTATGGCCCAATATTGGG | + |
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Preference number: 1 (lower is better) Translates to: DLKSLCIRFHNSSKP*TYTSIFFHLWPNIG Trigger: CCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATATGTCCAAGGCTTGGAAGAGTTATGGAAGCGGATGCATAAAGATTTAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR GCA 90 bp | ATAGGAATATCCACCTGTGGAGGTCTTAATCAGAAAGTATGTGTGTaGAAACATAACAATGCCACTATAACACTAAAACATACATCTTCC | + |
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Preference number: 1 (lower is better) Translates to: IGISTCGGLNQKVCV*KHNNATITLKHTSS Trigger: GGAAGATGTATGTTTTAGTGTTATAGTGGCATTGTTATGTTTGCACACACATACTTTCTGATTAAGACCTCCACAGGTGGATATTCCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CAA 90 bp | CCTCCCTCTGCACAGAGGTGGCTTAGGTGTAAGTTACAGGCTTCGTaGCTCCAGTGCTCTCAGTGCAGCCACCCTGATCTGTGCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PPSAQRWLRCKLQAS*LQCSQCSHPDLCCA Trigger: GGCACAGCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGCCTGTAACTTACACCTAAGCCACCTCTGTGCAGAGGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CAA 90 bp | TCTGAAAGGAGTGCAAAGGGAGCCCTTGGGATTGGTAGCAGGAACTaGTCAGGGATGGCTTGTTCCTACAGCAGAGTGAACTGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SERSAKGALGIGSRN*SGMACSYSRVNWSL Trigger: GAGGCTCCAGTTCACTCTGCTGTAGGAACAAGCCATCCCTGACAAGTTCCTGCTACCAATCCCAAGGGCTCCCTTTGCACTCCTTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR TCA 90 bp | AGTTACAGGCTTCGTTGCTCCAGTGCTCTCAGTGCAGCCACCCTGATCTGTGCTCTTGCCTTGAGGTCTTaGGACCACCTAGCTGATACT | + |
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Preference number: 2 (lower is better) Translates to: SYRLRCSSALSAATLICALALRS*DHLADT Trigger: AGTATCAGCTAGGTGGTCTCAAGACCTCAAGGCAAG...AGCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGCCTGTAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCGAGCACACAAGGCTTTTCCAGGTCAGTCTCTTGATTCTTCCATGTCCTCTTAAAAAGGCAGAATaGAGCCAACACCCACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: PSEHTRLFQVSLLILPCPLKKAE*SQHPQV Trigger: GACCTGTGGGTGTTGGCTCCATTCTGCCTTTTTAAG...AGGACATGGAAGAATCAAGAGACTGACCTGGAAAAGCCTTGTGTGCTCGCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR TCA 90 bp | ACAACTTTATTAGTTCTGAGACTGCCTTTCTCCACTCTACAGTGCTGTTCCAACGTTCCTACAGCAGAGTaGACTGGAGCCTCCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TTLLVLRLPFSTLQCCSNVPTAE*TGASKA Trigger: TGCCTTGGAGGCTCCAGTTCACTCTGCTGTAGGAAC...GTTGGAACAGCACTGTAGAGTGGAGAAAGGCAGTCTCAGAACTAATAAAGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGACACTGGAACAGCAGTCATTGGGCATGAACACAAATGTTTTGAAGGCATCCTGTGTGAGCTGCTaGAACTTCAGCTCAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: QVTLEQQSLGMNTNVLKASCVSC*NFSSAR Trigger: CCTTGCTGAGCTGAAGTTCCAGCAGCTCACACAGGA...TGCCTTCAAAACATTTGTGTTCATGCCCAATGACTGCTGTTCCAGTGTCACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | CTAGCAGGGTCATCTTCGGCCAACAACTTTATTAGTTCTGAGACTGCCTTTCTCTACAGCAGAGTGAACTaGAGCCTCCAAGGCAAACAA | + |
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Preference number: 2 (lower is better) Translates to: LAGSSSANNFISSETAFLYSRVN*SLQGKQ Trigger: TTGTTTGCCTTGGAGGCTCCAGTTCACTCTGCTGTA...GAGAAAGGCAGTCTCAGAACTAATAAAGTTGTTGGCCGAAGATGACCCTGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGGGTTCCTAAGAGGCTTCTCTCTGCTGATAAATGTTTACTGCCTGGGTTCTATGGCCCAATATTaGGCTATATCAAAGGATCAG | + |
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Preference number: 2 (lower is better) Translates to: ALGFLRGFSLLINVYCLGSMAQY*AISKDQ Trigger: CTGATCCTTTGATATAGCCCAATATTGGGCCATAGA...ACCCAGGCAGTAAACATTTATCAGCAGAGAGAAGCCTCTTAGGAACCCCAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | TTTAGACCAGAGAGATACAGGGTATCCCACCCACTCCAGATCTTAAATCTTTATGGAACTTGTCAGGGATaGCTTGTTCCTACAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FRPERYRVSHPLQILNLYGTCQG*LVPTAE Trigger: CTCTGCTGTAGGAACAAGCCATCCCTGACAAGTTCC...ATAAAGATTTAAGATCTGGAGTGGGTGGGATACCCTGTATCTCTCTGGTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | TTACAAGTGACACTGGAACAGCAGTCATTGGGCATGAACACAAATGTTTTGAAGCTGTGCCTCTACCAGTaGAGGCTCCATTTCTACACA | + |
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Preference number: 2 (lower is better) Translates to: LQVTLEQQSLGMNTNVLKLCLYQ*RLHFYT Trigger: TGTGTAGAAATGGAGCCTCCACTGGTAGAGGCACAG...CTTCAAAACATTTGTGTTCATGCCCAATGACTGCTGTTCCAGTGTCACTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCATCTATGGCCCAATATTGGGCTATATCAAAGGATCAGTCACGTATTCTGAAATCCAGGAGCACTaGAAGCCCACTGATGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SSIYGPILGYIKGSVTYSEIQEH*KPTDVQ Trigger: TTGGACATCAGTGGGCTTCCAGTGCTCCTGGATTTC...AGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGGGTTCCTAAGAGGCTTCTCTCTGCTGATAAATGTTTACTGCCTGGGTATTTTCTTCCATCTATaGCCCAATATTGGGCTATAT | + |
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Preference number: 2 (lower is better) Translates to: ALGFLRGFSLLINVYCLGIFFHL*PNIGLY Trigger: ATATAGCCCAATATTGGGCCATAGATGGAAGAAAAT...ACCCAGGCAGTAAACATTTATCAGCAGAGAGAAGCCTCTTAGGAACCCCAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCTTGGACATATACATCTATTTTCTTCCATCTATGGCCCAATATTGGGCTATCTCAGCAAGGTTGCTTaGCTTGAGGTCTTGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: SLGHIHLFSSIYGPILGYLSKVA*LEVLRP Trigger: TGGTCTCAAGACCTCAAGGCAAGCAACCTTGCTGAG...ATAGCCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATATGTCCAAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCATCTATGGCCCAATATTGGGCTATATCAAAGGATCAGTCACGTATTCTGCGTTTTCCCTAGAGTaGCATATTCATGACAACTCC | + |
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Preference number: 2 (lower is better) Translates to: SSIYGPILGYIKGSVTYSAFSLE*HIHDNS Trigger: GGAGTTGTCATGAATATGTCACTCTAGGGAAAACGC...AGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCATCTATGGCCCAATATTGGGCTATATCAAAGGATCAGTCACGTATTCTCAGGATGGACTCAGTTaGGTTTTGTGCTATCTTATC | + |
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Preference number: 2 (lower is better) Translates to: SSIYGPILGYIKGSVTYSQDGLS*VLCYLI Trigger: GATAAGATAGCACAAAACCCAACTGAGTCCATCCTG...AGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CAA 90 bp | AGCCTTGGACATATACATCTATTTTCTTCCATCTATGGCCCAATATaGGGCTATATCAAAGGATCAGTCACGTATTCTCTGCAATTGTAC | + |
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Preference number: 2 (lower is better) Translates to: SLGHIHLFSSIYGPI*GYIKGSVTYSLQLY Trigger: GTACAATTGCAGAGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATATGTCCAAGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR TCA 90 bp | AATATTGGGCTATATCAAAGGATCAGTCACGTATTCTCTGCAATTGTACAAGTTTCCAGGTCAGTCTCTTaGTTCTTCCATGTCCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: NIGLYQRISHVFSAIVQVSRSVS*FFHVLK Trigger: TTTCAGGACATGGAAGAATCAAGAGACTGACCTGGA...AACTTGTACAATTGCAGAGAATACGTGACTGATCCTTTGATATAGCCCAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR TCA 90 bp | GGGCTATATCAAAGGATCAGTCACGTATTCTCTGCAATTGTACAAGTTATGAGTATTCATGACAACTCCTaGTCCCATTTCATTTTCATG | + |
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Preference number: 2 (lower is better) Translates to: GLYQRISHVFSAIVQVMSIHDNS*SHFIFM Trigger: CATGAAAATGAAATGGGATCAGGAGTTGTCATGAAT...ACTCATAACTTGTACAATTGCAGAGAATACGTGACTGATCCTTTGATATAGCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR TCA 72 bp | GGCTTCGTTGCTCCAGTGCTCTCAGTGCAGCCACCCTaGTCTGTGCTGTGCCTCTACCAGTGGAGGCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: GFVAPVLSVQPP*SVLCLYQWRLH Trigger: ATGGAGCCTCCACTGGTAGAGGCACAGCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR GCA 72 bp | TTGCTCCAGTGCTCTCAGTGCAGCCACCCTGATCTGTaGTGTGCCTCTACCAGTGGAGGCTCCATTTCTACA | + |
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Preference number: 3 (lower is better) Translates to: LLQCSQCSHPDL*CASTSGGSIST Trigger: TGTAGAAATGGAGCCTCCACTGGTAGAGGCACAGCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR GCA 72 bp | TGGCTTAGGTGTAAGTTACAGGCTTCGTTGCTCCAGTaGTCTCAGTGCAGCCACCCTGATCTGTGCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: WLRCKLQASLLQ*SQCSHPDLCCA Trigger: GGCACAGCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGCCTGTAACTTACACCTAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR GCA 72 bp | CACAGAGGTGGCTTAGGTGTAAGTTACAGGCTTCGTTaGTCCAGTGCTCTCAGTGCAGCCACCCTGATCTGT | + |
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Preference number: 3 (lower is better) Translates to: HRGGLGVSYRLR*SSALSAATLIC Trigger: ACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGCCTGTAACTTACACCTAAGCCACCTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR GCA 72 bp | ATTCCACTAGGAGAGGCCATTCAAAGTTACTCTCACTaGATCAGAGGTCCCCTTCCTCCCTCTGCACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: IPLGEAIQSYSH*IRGPLPPSAQR Trigger: CCTCTGTGCAGAGGGAGGAAGGGGACCTCTGATGCAGTGAGAGTAACTTTGAATGGCCTCTCCTAGTGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CAA 90 bp | TACAGGGTATCCCACCCACTCCAGATCTTAAATCTTTATGCATCCGCTTCCATAAGGGAGCCCTTGGGATaGGTAGCAGGAACTTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: YRVSHPLQILNLYASASIREPLG*VAGTCQ Trigger: CTGACAAGTTCCTGCTACCAATCCCAAGGGCTCCCT...TATGGAAGCGGATGCATAAAGATTTAAGATCTGGAGTGGGTGGGATACCCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR GCA 72 bp | TTCCTAAGAGGCTTCTCTCTGCTGATAAATGTTTACTaGCTGGGTGACATCAGAGAGGAACGCTCTCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: FLRGFSLLINVY*LGDIREERSPE Trigger: CTCTGGAGAGCGTTCCTCTCTGATGTCACCCAGGCAGTAAACATTTATCAGCAGAGAGAAGCCTCTTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR TCA 72 bp | CAAGTTATGAGTCTTTGGAGTGACCATCTCCCACTGTaGAAAGGCTCCCAATTACAAGTGACACTGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: QVMSLWSDHLPL*KGSQLQVTLEQ Trigger: CTGTTCCAGTGTCACTTGTAATTGGGAGCCTTTTCACAGTGGGAGATGGTCACTCCAAAGACTCATAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CCA 72 bp | TACACAAGTCTTAGATTTAAATCCTGTGTGAGCTGCTaGAACTTCAGCTCAGCAAGGTTGCTTGCCTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: YTSLRFKSCVSC*NFSSARLLALR Trigger: CCTCAAGGCAAGCAACCTTGCTGAGCTGAAGTTCCAGCAGCTCACACAGGATTTAAATCTAAGACTTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CAA 90 bp | TTTAGACCAGAGAGATACAGGGTATCCCACCCACTCCAGATCTTAAATCTTTATATTGGTAGCAGGAACTaGTCAGGGATGGCTTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: FRPERYRVSHPLQILNLYIGSRN*SGMACS Trigger: GGAACAAGCCATCCCTGACAAGTTCCTGCTACCAAT...ATAAAGATTTAAGATCTGGAGTGGGTGGGATACCCTGTATCTCTCTGGTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR GCA 72 bp | GTGAACTGTGTGCAGGATGGACTCAGTTGGGTTTTGTaGTATCTTATCATGGCACTAGAAAGACGAAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VNCVQDGLSWVL*YLIMALERRKR Trigger: TCTCTTTCGTCTTTCTAGTGCCATGATAAGATAGCACAAAACCCAACTGAGTCCATCCTGCACACAGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR-3UTR CAA 90 bp | ATCCGCTTCCATAACTCTTCCAAGCCTTGGACATATACATCTATTTTCTTCCATCTTGTCAGGGATGGCTaGTTCCTACAGCAGAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: IRFHNSSKPWTYTSIFFHLVRDG*FLQQSE Trigger: TTCACTCTGCTGTAGGAACAAGCCATCCCTGACAAG...ATGGAAGAAAATAGATGTATATGTCCAAGGCTTGGAAGAGTTATGGAAGCGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR TCA 72 bp | TCCATTTCTACACAAGTCTTAGATTTAAATCCTGTGTaGGCTGCTGGAACTTCAGCTCAGCAAGGTTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: SISTQVLDLNPV*AAGTSAQQGCL Trigger: CAAGCAACCTTGCTGAGCTGAAGTTCCAGCAGCTCACACAGGATTTAAATCTAAGACTTGTGTAGAAATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR TCA 72 bp | GCTTTTCCAGGTCAGTCTCTTGATTCTTCCATGTCCTaGAACCAAAGTATATCATGTCCTCAGCAAGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: AFPGQSLDSSMS*NQSISCPQQGV Trigger: AACTCCTTGCTGAGGACATGATATACTTTGGTTTCAGGACATGGAAGAATCAAGAGACTGACCTGGAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CCA 72 bp | TCTTTATGCATCCGCTTCCATAACTCTTCCAAGCCTTaGACATATACATCTATTTTCTTCCATCTATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SLCIRFHNSSKP*TYTSIFFHLWP Trigger: GGGCCATAGATGGAAGAAAATAGATGTATATGTCCAAGGCTTGGAAGAGTTATGGAAGCGGATGCATAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CCA 72 bp | AAGCCTTGGACATATACATCTATTTTCTTCCATCTATaGCCCAATATTGGGCTATATCAAAGGATCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: KPWTYTSIFFHL*PNIGLYQRISH Trigger: GTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATATGTCCAAGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CCA 72 bp | ATATACATCTATTTTCTTCCATCTATGGCCCAATATTaGGCTATATCAAAGGATCAGTCACGTATTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: IYIYFLPSMAQY*AISKDQSRILC Trigger: GCAGAGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR TCA 90 bp | AACACCCACAGGTCACCACCAGCATGGGTGCATCTGAAAGGAGTGCAAAGGGAGCTAATGGAGGGTCCTTaGCTGGCCGAGCACCCACTA | + |
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Preference number: 4 (lower is better) Translates to: NTHRSPPAWVHLKGVQRELMEGP*LAEHPL Trigger: TAGTGGGTGCTCGGCCAGTCAAGGACCCTCCATTAG...CTCCCTTTGCACTCCTTTCAGATGCACCCATGCTGGTGGTGACCTGTGGGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR CCA 90 bp | AACAGTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGCCTCTGTCAGCCCCCTaGTCTCCAGACTCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: NSLLEHRSTAEGLLTGARPLSAP*SPDSAT Trigger: GGTGGCTGAGTCTGGAGACCAGGGGGCTGACAGAGG...CCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159755.8 |
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| CDS-3UTR GCA 90 bp | TGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGGTTGCCCAGGGGACATGTTCCTTCATaGCCCTGGAGAACAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: WSTGAQLRDYLQEHGLPRGHVPS*PWRTIP Trigger: TGGAATTGTTCTCCAGGGGCATGAAGGAACATGTCC...CCTGGGCAACCCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR CCA 90 bp | AACAGTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGTGGAGGGTCCTTGACTaGCCGAGCACCCACTATGCC | + |
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Preference number: 4 (lower is better) Translates to: NSLLEHRSTAEGLLTGARWRVLD*PSTHYA Trigger: GGCATAGTGGGTGCTCGGCCAGTCAAGGACCCTCCA...CCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CAA 72 bp | AGTGCAAAGGGAGCCCTTGGGATTGGTAGCAGGAACTaGTCAGGGATGGCTTGTTCCTACAGCAGAGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SAKGALGIGSRN*SGMACSYSRVN Trigger: GTTCACTCTGCTGTAGGAACAAGCCATCCCTGACAAGTTCCTGCTACCAATCCCAAGGGCTCCCTTTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CAA 72 bp | GTGCATCTGAAAGGAGTGCAAAGGGAGCCCTTGGGATaGGTAGCAGGAACTTGTCAGGGATGGCTTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VHLKGVQREPLG*VAGTCQGWLVP Trigger: AGGAACAAGCCATCCCTGACAAGTTCCTGCTACCAATCCCAAGGGCTCCCTTTGCACTCCTTTCAGATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR GCA 90 bp | CTAGGAGAGGCCATTCAAAGTTACTCTCACTGCATCAGAGGTCCCCTTCCTCCCGGACATGTTCCTTCATaGCCCTGGAGAACAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: LGEAIQSYSHCIRGPLPPGHVPS*PWRTIP Trigger: TGGAATTGTTCTCCAGGGGCATGAAGGAACATGTCC...GGGAGGAAGGGGACCTCTGATGCAGTGAGAGTAACTTTGAATGGCCTCTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR GCA 90 bp | AACAGTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGGGAGAAAGAGAAAGCTaGATACTGTGGCCAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: NSLLEHRSTAEGLLTGARGERES*ILWPGA Trigger: GGCTCCTGGCCACAGTATGCAGCTTTCTCTTTCTCC...CCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR CCA 90 bp | GTAATGACTTACAAACCTCCAGCCCTGGGGTTCCTAAGAGGCTTCTCTCTGCTGAGTGTCAGCATATGGTaGAAGGCAGCAGGGACATGT | + |
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Preference number: 4 (lower is better) Translates to: VMTYKPPALGFLRGFSLLSVSIW*KAAGTC Trigger: ACATGTCCCTGCTGCCTTCCACCATATGCTGACACT...CAGCAGAGAGAAGCCTCTTAGGAACCCCAGGGCTGGAGGTTTGTAAGTCATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR TCA 90 bp | GTAATGACTTACAAACCTCCAGCCCTGGGGTTCCTAAGAGGCTTCTCTCTGCTGAAAAGCAGGAGAGTCTaGGGTAGTGTCAGCATATGG | + |
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Preference number: 4 (lower is better) Translates to: VMTYKPPALGFLRGFSLLKSRRV*GSVSIW Trigger: CCATATGCTGACACTACCTCAGACTCTCCTGCTTTT...CAGCAGAGAGAAGCCTCTTAGGAACCCCAGGGCTGGAGGTTTGTAAGTCATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR TCA 90 bp | AGTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGGTTTCAGGTAAGACTTGGTaGTGTCAGCCAGGTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SLLEHRSTAEGLLTGARVSGKTW*CQPGQL Trigger: AAGCTGACCTGGCTGACATCACCAAGTCTTACCTGA...AACCCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR CCA 90 bp | TACAGGGTATCCCACCCACTCCAGATCTTAAATCTTTATGCATCCGCTTCCATAGAAAGCTGCATACTGTaGCCAGGAGCCAGGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YRVSHPLQILNLYASASIESCIL*PGARSQ Trigger: CTGGCTCCTGGCTCCTGGCCACAGTATGCAGCTTTC...TATGGAAGCGGATGCATAAAGATTTAAGATCTGGAGTGGGTGGGATACCCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR TCA 90 bp | AGTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGGTTAAAAGCAGGAGAGTCTaGGGTAGTGTCAGCATATGG | + |
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Preference number: 4 (lower is better) Translates to: SLLEHRSTAEGLLTGARVKSRRV*GSVSIW Trigger: CCATATGCTGACACTACCTCAGACTCTCCTGCTTTT...AACCCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR CCA 90 bp | AACAGTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGTCCAGGACCTTTTTGTaGTCCTTCTCCTGGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: NSLLEHRSTAEGLLTGARSRTFL*SFSWYC Trigger: ACAGTACCAGGAGAAGGACCACAAAAAGGTCCTGGA...CCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAACTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR CCA 90 bp | CTAGCAGGGTCATCTTCGGCCAACAACTTTATTAGTTCTGAGACTGCCTTTCTCAGTGTCAGCATATGGTaGAAGGCAGCAGGGACATGT | + |
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Preference number: 4 (lower is better) Translates to: LAGSSSANNFISSETAFLSVSIW*KAAGTC Trigger: ACATGTCCCTGCTGCCTTCCACCATATGCTGACACT...GAGAAAGGCAGTCTCAGAACTAATAAAGTTGTTGGCCGAAGATGACCCTGCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR GCA 90 bp | ACAACTTTATTAGTTCTGAGACTGCCTTTCTCCACTCTACAGTGCTGTTCCAACGCCACAGCACTGTACTaGACACAACTGGTCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: TTLLVLRLPFSTLQCCSNATALY*TQLVSR Trigger: CCTTGAGACCAGTTGTGTGCAGTACAGTGCTGTGGC...GTTGGAACAGCACTGTAGAGTGGAGAAAGGCAGTCTCAGAACTAATAAAGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CAA 72 bp | CCCAGCGAGCACACAAGGCTTTTCCAGGTCAGTCTCTaGATTCTTCCATGTCCTGAAACCAAAGTATATCAT | + |
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Preference number: 4 (lower is better) Translates to: PSEHTRLFQVSL*ILPCPETKVYH Trigger: ATGATATACTTTGGTTTCAGGACATGGAAGAATCAAGAGACTGACCTGGAAAAGCCTTGTGTGCTCGCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR TCA 90 bp | TTTAGACCAGAGAGATACAGGGTATCCCACCCACTCCAGATCTTAAATCTTTATTCAGGTAAGACTTGGTaGTGTCAGCCAGGTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FRPERYRVSHPLQILNLYSGKTW*CQPGQL Trigger: AAGCTGACCTGGCTGACATCACCAAGTCTTACCTGA...ATAAAGATTTAAGATCTGGAGTGGGTGGGATACCCTGTATCTCTCTGGTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR GCA 90 bp | AGCCTTGGACATATACATCTATTTTCTTCCATCTATGGCCCAATATTGGGCTATGGAGAAAGAGAAAGCTaGATACTGTGGCCAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLGHIHLFSSIYGPILGYGERES*ILWPGA Trigger: GGCTCCTGGCCACAGTATGCAGCTTTCTCTTTCTCC...ATAGCCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATATGTCCAAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR CCA 90 bp | ACAACTTTATTAGTTCTGAGACTGCCTTTCTCCACTCTACAGTGCTGTTCCAACTCCAGGACCTTTTTGTaGTCCTTCTCCTGGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: TTLLVLRLPFSTLQCCSNSRTFL*SFSWYC Trigger: ACAGTACCAGGAGAAGGACCACAAAAAGGTCCTGGA...GTTGGAACAGCACTGTAGAGTGGAGAAAGGCAGTCTCAGAACTAATAAAGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| 3UTR CAA 72 bp | CATATACATCTATTTTCTTCCATCTATGGCCCAATATaGGGCTATATCAAAGGATCAGTCACGTATTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HIHLFSSIYGPI*GYIKGSVTYSL Trigger: CAGAGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCATAGATGGAAGAAAATAGATGTATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS CCA 90 bp | AGAGAGGAACGCTCTCCAGAGTCTCCTGAGCCTCTGTCAGCCCCCTaGTCTCCAGACTCAGCCACCCAGAAGGAGCCATGTGCATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: REERSPESPEPLSAP*SPDSATQKEPCAFR Trigger: CCTGAATGCACATGGCTCCTTCTGGGTGGCTGAGTCTGGAGACCAGGGGGCTGACAGAGGCTCAGGAGACTCTGGAGAGCGTTCCTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159755.8 |
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| CDS CCA 90 bp | AGCTGCATACTGTGGCCAGGAGCCAGGAGCCAGACACTAGGACTATaGTCACAGGCACCCCAGGTAAAAGCAGGAGAGTCTGAGGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: SCILWPGARSQTLGL*SQAPQVKAGESEVV Trigger: CACTACCTCAGACTCTCCTGCTTTTACCTGGGGTGCCTGTGACCATAGTCCTAGTGTCTGGCTCCTGGCTCCTGGCCACAGTATGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS TCA 90 bp | ACAGGCGAAAGAGCTGCATCTGCTTCTTCCCTAATGGAGGGTCCTTaGCTGGCCGAGCACCCACTATGCCAACTACCTGGTCTCCAGACT | + |
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Preference number: 5 (lower is better) Translates to: TGERAASASSLMEGP*LAEHPLCQLPGLQT Trigger: AGTCTGGAGACCAGGTAGTTGGCATAGTGGGTGCTCGGCCAGTCAAGGACCCTCCATTAGGGAAGAAGCAGATGCAGCTCTTTCGCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS TCA 90 bp | ACTAGGACTATGGTCACAGGCACCCCAGGTAAAAGCAGGAGAGTCTaGGGTAGTGTCAGCATATGGTGGAAGGCAGCAGGGACATGTTCC | + |
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Preference number: 5 (lower is better) Translates to: TRTMVTGTPGKSRRV*GSVSIWWKAAGTCS Trigger: GGAACATGTCCCTGCTGCCTTCCACCATATGCTGACACTACCTCAGACTCTCCTGCTTTTACCTGGGGTGCCTGTGACCATAGTCCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS CCA 90 bp | TTGTGGCTATGCTCACAAAGTACTGGTCTGTTTTCCGGAAGCCCATaGCCTGGTAGAGAGCCACAGCACTGTACTGCACACAACTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LWLCSQSTGLFSGSP*PGREPQHCTAHNWS Trigger: AGACCAGTTGTGTGCAGTACAGTGCTGTGGCTCTCTACCAGGCCATGGGCTTCCGGAAAACAGACCAGTACTTTGTGAGCATAGCCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS GCA 90 bp | GTAGTGTCAGCATATGGTGGAAGGCAGCAGGGACATGTTCCTTCATaGCCCTGGAGAACAATTCCAGGACCTTTTTGTGGTCCTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: VVSAYGGRQQGHVPS*PWRTIPGPFCGPSP Trigger: AGGAGAAGGACCACAAAAAGGTCCTGGAATTGTTCTCCAGGGGCATGAAGGAACATGTCCCTGCTGCCTTCCACCATATGCTGACACTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS CCA 90 bp | TCAGCATATGGTGGAAGGCAGCAGGGACATGTTCCTTCATGCCCCTaGAGAACAATTCCAGGACCTTTTTGTGGTCCTTCTCCTGGTACT | + |
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Preference number: 5 (lower is better) Translates to: SAYGGRQQGHVPSCP*RTIPGPFCGPSPGT Trigger: AGTACCAGGAGAAGGACCACAAAAAGGTCCTGGAATTGTTCTCCAGGGGCATGAAGGAACATGTCCCTGCTGCCTTCCACCATATGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR CAA 90 bp | AACAGTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGAATTCCAGGACCTTTTaGTGGTCCTTCTCCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: NSLLEHRSTAEGLLTGARNSRTF*WSFSWY Trigger: GTACCAGGAGAAGGACCACAAAAAGGTCCTGGAATT...CCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS-3UTR CAA 90 bp | AACAGTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGAAAGACCCATTAACCTaGTGGCTATGCTCACAAAGT | + |
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Preference number: 5 (lower is better) Translates to: NSLLEHRSTAEGLLTGARKDPLT*WLCSQS Trigger: ACTTTGTGAGCATAGCCACAAGGTTAATGGGTCTTT...CCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAACTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS-3UTR CAA 90 bp | AAGACGAAAGAGAGATACTTAAAAAGGCAGAATGGAGCCAACACCCACAGGTCAAATTCCAGGACCTTTTaGTGGTCCTTCTCCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: KTKERYLKRQNGANTHRSNSRTF*WSFSWY Trigger: GTACCAGGAGAAGGACCACAAAAAGGTCCTGGAATT...TGACCTGTGGGTGTTGGCTCCATTCTGCCTTTTTAAGTATCTCTCTTTCGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS TCA 72 bp | ATGGTCACAGGCACCCCAGGTAAAAGCAGGAGAGTCTaGGGTAGTGTCAGCATATGGTGGAAGGCAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: MVTGTPGKSRRV*GSVSIWWKAAG Trigger: CCCTGCTGCCTTCCACCATATGCTGACACTACCTCAGACTCTCCTGCTTTTACCTGGGGTGCCTGTGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS TCA 72 bp | AGAGCTGCATCTGCTTCTTCCCTAATGGAGGGTCCTTaGCTGGCCGAGCACCCACTATGCCAACTACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RAASASSLMEGP*LAEHPLCQLPG Trigger: ACCAGGTAGTTGGCATAGTGGGTGCTCGGCCAGTCAAGGACCCTCCATTAGGGAAGAAGCAGATGCAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS GCA 72 bp | TGCTGTGAGGACACAGACAGGCGAAAGAGCTGCATCTaGTTCTTCCCTAATGGAGGGTCCTTGACTGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: CCEDTDRRKSCI*FFPNGGSLTGR Trigger: TCGGCCAGTCAAGGACCCTCCATTAGGGAAGAAGCAGATGCAGCTCTTTCGCCTGTCTGTGTCCTCACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS CCA 72 bp | CCTGGTAGAGAGCCACAGCACTGTACTGCACACAACTaGTCTCAAGGACAACATCACTGTAGTCCTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: PGREPQHCTAHN*SQGQHHCSPGP Trigger: GGGACCAGGACTACAGTGATGTTGTCCTTGAGACCAGTTGTGTGCAGTACAGTGCTGTGGCTCTCTACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095757.4 |
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| CDS CCA 72 bp | GGTGGAAGGCAGCAGGGACATGTTCCTTCATGCCCCTaGAGAACAATTCCAGGACCTTTTTGTGGTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GGRQQGHVPSCP*RTIPGPFCGPS Trigger: AGAAGGACCACAAAAAGGTCCTGGAATTGTTCTCCAGGGGCATGAAGGAACATGTCCCTGCTGCCTTCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS GCA 72 bp | GCATATGGTGGAAGGCAGCAGGGACATGTTCCTTCATaGCCCTGGAGAACAATTCCAGGACCTTTTTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: AYGGRQQGHVPS*PWRTIPGPFCG Trigger: ACCACAAAAAGGTCCTGGAATTGTTCTCCAGGGGCATGAAGGAACATGTCCCTGCTGCCTTCCACCATATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS CAA 90 bp | GCCATGTGCATTCAGGTAAGACTTGGTGATGTCAGCCAGGTCAGCTaGCAAACTTGTAGCCACGTAATTTCTCCAAGAAAGCCAGATAAG | + |
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Preference number: 6 (lower is better) Translates to: AMCIQVRLGDVSQVS*QTCSHVISPRKPDK Trigger: CTTATCTGGCTTTCTTGGAGAAATTACGTGGCTACAAGTTTGCAAGCTGACCTGGCTGACATCACCAAGTCTTACCTGAATGCACATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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| CDS CAA 72 bp | ATTCAGGTAAGACTTGGTGATGTCAGCCAGGTCAGCTaGCAAACTTGTAGCCACGTAATTTCTCCAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: IQVRLGDVSQVS*QTCSHVISPRK Trigger: CTTTCTTGGAGAAATTACGTGGCTACAAGTTTGCAAGCTGACCTGGCTGACATCACCAAGTCTTACCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095757.4 ENSMUST00000159755.8 |
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