Pregenerated sensors for NAT8F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033634Ensembl transcript IDs: ENSMUST00000045008.8
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCCTCTGCACAGAGGTGGCTTAGGTGTAAGTTACAGGCTTCGTTaGTCCAGTGCTCTCAGTGCAGCCACCCTGATCTGTGCTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LPLHRGGLGVSYRLR*SSALSAATLICAVP Trigger: AGGCACAGCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGCCTGTAACTTACACCTAAGCCACCTCTGTGCAGAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 90 bp | GCACAGAGGTGGCTTAGGTGTAAGTTACAGGCTTCGTTGCTCCAGTaGTCTCAGTGCAGCCACCCTGATCTGTGCTGTGCCTCTACCAGT | + |
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Preference number: 1 (lower is better) Translates to: AQRWLRCKLQASLLQ*SQCSHPDLCCASTS Trigger: ACTGGTAGAGGCACAGCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGCCTGTAACTTACACCTAAGCCACCTCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 90 bp | GGAGGGATCATTCCACCAGGAGAGGCCATTCAAAGTTACTCTCACTaGATCAGAGGTCCCCTTCCTCCCTCTGCACAGAGGTGGCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: GGIIPPGEAIQSYSH*IRGPLPPSAQRWLR Trigger: CCTAAGCCACCTCTGTGCAGAGGGAGGAAGGGGACCTCTGATGCAGTGAGAGTAACTTTGAATGGCCTCTCCTGGTGGAATGATCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 90 bp | CAGGCTTCGTTGCTCCAGTGCTCTCAGTGCAGCCACCCTGATCTGTaGTGTGCCTCTACCAGTGGAGGCTCCATTTCTACACAAGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: QASLLQCSQCSHPDL*CASTSGGSISTQVL Trigger: TAAGACTTGTGTAGAAATGGAGCCTCCACTGGTAGAGGCACAGCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 90 bp | ACCCTGGGGTTCCTAAGAGGCTTCTCTCTGCTGATAAATGTTTACTaGCTGGGTGACATCAGAGAGGAACGCTCTCCAGAGTCTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: TLGFLRGFSLLINVY*LGDIREERSPESPG Trigger: CCCAGGAGACTCTGGAGAGCGTTCCTCTCTGATGTCACCCAGGCAGTAAACATTTATCAGCAGAGAGAAGCCTCTTAGGAACCCCAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CCA 90 bp | TTAAAAAGGCAGAATGGAGCCAACACCCACAGGTCACCACCAGCATaGCTGCATCTGAAAGGAGTGCAAAGGGAGCCCTTGGGATTGGTA | + |
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Preference number: 1 (lower is better) Translates to: LKRQNGANTHRSPPA*LHLKGVQREPLGLV Trigger: TACCAATCCCAAGGGCTCCCTTTGCACTCCTTTCAGATGCAGCCATGCTGGTGGTGACCTGTGGGTGTTGGCTCCATTCTGCCTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 90 bp | ACACAAGGCTGTTCCAGGTCACTCTCTGTTGATTCTTCTGTGTCCTaGAACCAAACAGGTCATGTCCTCAGCAAGGAGTTCTCCAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: TQGCSRSLSVDSSVS*NQTGHVLSKEFSSS Trigger: GGAACTGGAGAACTCCTTGCTGAGGACATGACCTGTTTGGTTTCAGGACACAGAAGAATCAACAGAGAGTGACCTGGAACAGCCTTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 90 bp | GAGACTGCCTTTCTCCACTCTACAGTGCTGTTCCAACTCCTGAACTaGCATTTTAACTTTTTACAGAGGAAATCCAGGAGCACTGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: ETAFLHSTVLFQLLN*HFNFLQRKSRSTGS Trigger: GCTTCCAGTGCTCCTGGATTTCCTCTGTAAAAAGTTAAAATGGCAGTTCAGGAGTTGGAACAGCACTGTAGAGTGGAGAAAGGCAGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 90 bp | TCTCCAGTTCCAACATGCAACCAAAAGCAGTGGAAACCACATCTGTaGTTTGATGTCCCTCTGGGCCTTTCCTTAACAATTCTGGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: SPVPTCNQKQWKPHL*FDVPLGLSLTILEV Trigger: GACTTCCAGAATTGTTAAGGAAAGGCCCAGAGGGACATCAAATCACAGATGTGGTTTCCACTGCTTTTGGTTGCATGTTGGAACTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 90 bp | TCTTTATGCATCCGCTTCCATAACTCTTCCAAGCCTTGGAGCAGGTaGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTATATCCATTTT | + |
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Preference number: 1 (lower is better) Translates to: SLCIRFHNSSKPWSR*CVCVCVCVFVYIHF Trigger: AAAATGGATATACACAAACACACACACACACACACACACACATCACCTGCTCCAAGGCTTGGAAGAGTTATGGAAGCGGATGCATAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 90 bp | TATATCAAAGGATCAGTCAGTTATGCTCAGCAATCAGGGAAATTATaGGTCTCTGGAGTGACTACCTCTCACTGTGAAAAAGGCTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: YIKGSVSYAQQSGKL*VSGVTTSHCEKGSL Trigger: AAGGGAGCCTTTTTCACAGTGAGAGGTAGTCACTCCAGAGACTCATAATTTCCCTGATTGCTGAGCATAACTGACTGATCCTTTGATATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 90 bp | GTTGGTCCAGGCATTTTCCCTAGGGTGACATATTCATACAATTCCTaGTCCCATTTCATCTTCATGAATCCCCAAGTACATTTCATGCAT | + |
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Preference number: 1 (lower is better) Translates to: VGPGIFPRVTYSYNS*SHFIFMNPQVHFMH Trigger: ATGCATGAAATGTACTTGGGGATTCATGAAGATGAAATGGGATCAGGAATTGTATGAATATGTCACCCTAGGGAAAATGCCTGGACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 90 bp | ATGGGAATATCCACCTATGGAGGCCTTAATCAGAAAGTATGTGTGTaGAAACATAACAATGCCACTATAACACTACAACATACATCTTCC | + |
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Preference number: 1 (lower is better) Translates to: MGISTYGGLNQKVCV*KHNNATITLQHTSS Trigger: GGAAGATGTATGTTGTAGTGTTATAGTGGCATTGTTATGTTTGCACACACATACTTTCTGATTAAGGCCTCCATAGGTGGATATTCCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTTTGTGTATATCCATTTTCTTCCATTTATaGCCCAATATCGGATTATATCAAAGGATCAGTCAGTTATGCTCA | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCLCISIFFHL*PNIGLYQRISQLCS Trigger: TGAGCATAACTGACTGATCCTTTGATATAATCCGATATTGGGTCATAAATGGAAGAAAATGGATATACACAAACACACACACACACACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGCACTAGAAACCCAGCGAGCACACAAGGCTGTTCCAGGTCACTCTCTGTTGGCTTCGTTGCTCCAGTaGTCTCAGTGCAGCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: LALETQRAHKAVPGHSLLASLLQ*SQCSHP Trigger: AGGGTGGCTGCACTGAGAGCACTGGAGCAACGAAGC...CAACAGAGAGTGACCTGGAACAGCCTTGTGTGCTCGCTGGGTTTCTAGTGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CCA 90 bp | TACTGCCTGGGTGACATCAGAGAGGAACGCTCTCCAGAGTCTCCTGGGCCTCTGAATCCTGTGAGCTGCTaGAACTTCAGCTCAGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: YCLGDIREERSPESPGPLNPVSC*NFSSAR Trigger: CCTTGCTGAGCTGAAGTTCCAGCAGCTCACAGGATT...CAGAGGCCCAGGAGACTCTGGAGAGCGTTCCTCTCTGATGTCACCCAGGCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR TCA 90 bp | AGATTCCTAAGTGAACTGTGTGCAGGATGGACTCAGTTGGGTTTTGTGCTATCTAAGCCATGGAGGCAGTaGGACCACTGGGGCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RFLSELCAGWTQLGFVLSKPWRQ*DHWGQR Trigger: TCTCTGGCCCCAGTGGTCTCACTGCCTCCATGGCTT...AGATAGCACAAAACCCAACTGAGTCCATCCTGCACACAGTTCACTTAGGAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTGGCTTAGGTGTAAGTTACAGGCTTCGTTGCTCCAGTGCTCTCAGTGCAGTTCCTAGAGCAGAGTaGACTGAAGCCTTCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: RGGLGVSYRLRCSSALSAVPRAE*TEAFWT Trigger: TGTCCAGAAGGCTTCAGTTCACTCTGCTCTAGGAAC...TGCACTGAGAGCACTGGAGCAACGAAGCCTGTAACTTACACCTAAGCCACCTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGGTTGTGGAAACCACATCTGTaGTTTGATGTCCCTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VYWSTGAQLRDYLQEHGLWKPHL*FDVPLG Trigger: GCCCAGAGGGACATCAAATCACAGATGTGGTTTCCA...CAACCCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCACCAGGAGAGGCCATTCAAAGTTACTCTCACTGCATCAGAGGTCCCCTTCTTGGTACTGGGAAACTaGCAGGAGTGGCTTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: FHQERPFKVTLTASEVPFLVLGN*QEWLVP Trigger: AGGAACAAGCCACTCCTGGCAGTTTCCCAGTACCAA...GAAGGGGACCTCTGATGCAGTGAGAGTAACTTTGAATGGCCTCTCCTGGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGGTTGAACTATAGGAGAGGATaGGAAGCCAGAAGCACACAG | + |
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Preference number: 2 (lower is better) Translates to: VYWSTGAQLRDYLQEHGLNYRRG*EARSTQ Trigger: CTGTGTGCTTCTGGCTTCTCATCCTCTCCTATAGTT...CAACCCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAACAGGTCATGTCCTCAGCAAGGAGTTCTCCAGTTCCAACATGCAACCAAAAGGTCACCACCAGCATaGCTGCATCTGAAAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: PNRSCPQQGVLQFQHATKRSPPA*LHLKGV Trigger: CACTCCTTTCAGATGCAGCCATGCTGGTGGTGACCT...TTTGGTTGCATGTTGGAACTGGAGAACTCCTTGCTGAGGACATGACCTGTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR GCA 90 bp | CAACTCCTGAACTGCCATTTTAACTTTTTACAGAGGAAATCCAGGAGCACTGGACTCCAGTGCTCTCAGTaGAGCCACCCTGATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: QLLNCHFNFLQRKSRSTGLQCSQ*SHPDLC Trigger: GCACAGATCAGGGTGGCTGCACTGAGAGCACTGGAG...TCCAGTGCTCCTGGATTTCCTCTGTAAAAAGTTAAAATGGCAGTTCAGGAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCACTAGAAACCCAGCGAGCACACAAGGCTGTTCCAGGTCACTCTCTGTTGCCCATTTCATCTTCATaGATCCCCAAGTACATTTCA | + |
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Preference number: 2 (lower is better) Translates to: LALETQRAHKAVPGHSLLPISSS*IPKYIS Trigger: TGAAATGTACTTGGGGATTCATGAAGATGAAATGGG...CAACAGAGAGTGACCTGGAACAGCCTTGTGTGCTCGCTGGGTTTCTAGTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAATATCGGATTATATCAAAGGATCAGTCAGTTATGCTCAGCAATCAGGGAATATGAGTCTCTGGAGTaGCTACCTCTCACTGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PNIGLYQRISQLCSAIREYESLE*LPLTVK Trigger: TTTCACAGTGAGAGGTAGTCACTCCAGAGACTCATA...TTCCCTGATTGCTGAGCATAACTGACTGATCCTTTGATATAATCCGATATTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR GCA 90 bp | CCATTTATGACCCAATATCGGATTATATCAAAGGATCAGTCAGTTATGCTCAGCCAAAGTTACTCTCACTaGATCAGAGGTCCCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PFMTQYRIISKDQSVMLSQSYSH*IRGPLP Trigger: AGGAAGGGGACCTCTGATGCAGTGAGAGTAACTTTG...GCTGAGCATAACTGACTGATCCTTTGATATAATCCGATATTGGGTCATAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAATATCGGATTATATCAAAGGATCAGTCAGTTATGCTCAGCAATCAGGGAATGCTGTTCCAACTCCTaGACTGCCATTTTAACTTTT | + |
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Preference number: 2 (lower is better) Translates to: PNIGLYQRISQLCSAIRECCSNS*TAILTF Trigger: AAAAGTTAAAATGGCAGTTCAGGAGTTGGAACAGCA...TTCCCTGATTGCTGAGCATAACTGACTGATCCTTTGATATAATCCGATATTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATCTTCATGAATCCCCAAGTACATTTCATGCATTTAATTGTGCTTTCCCATCTCAGCAAGGTTGCTTaGCTTGAAGTCTTGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: FIFMNPQVHFMHLIVLSHLSKVA*LEVLRP Trigger: TGGTCTCAAGACTTCAAGGCAAGCAACCTTGCTGAG...ATGGGAAAGCACAATTAAATGCATGAAATGTACTTGGGGATTCATGAAGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 72 bp | CCAACACCCACAGGTCACCACCAGCATGGCTGCATCTaGAAGGAGTGCAAAGGGAGCCCTTGGGATTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: PTPTGHHQHGCI*KECKGSPWDWY Trigger: GTACCAATCCCAAGGGCTCCCTTTGCACTCCTTTCAGATGCAGCCATGCTGGTGGTGACCTGTGGGTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 72 bp | ATTCCACCAGGAGAGGCCATTCAAAGTTACTCTCACTaGATCAGAGGTCCCCTTCCTCCCTCTGCACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: IPPGEAIQSYSH*IRGPLPPSAQR Trigger: CCTCTGTGCAGAGGGAGGAAGGGGACCTCTGATGCAGTGAGAGTAACTTTGAATGGCCTCTCCTGGTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTGGCTTAGGTGTAAGTTACAGGCTTCGTTGCTCCAGTGCTCTCAGTGCAGCAGGATGGACTCAGTaGGGTTTTGTGCTATCTTAT | + |
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Preference number: 3 (lower is better) Translates to: RGGLGVSYRLRCSSALSAAGWTQ*GFVLSY Trigger: ATAAGATAGCACAAAACCCAACTGAGTCCATCCTGC...TGCACTGAGAGCACTGGAGCAACGAAGCCTGTAACTTACACCTAAGCCACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CAA 90 bp | AGATTCCTAAGTGAACTGTGTGCAGGATGGACTCAGTTGGGTTTTGTGCTATCTCCTCAAGATGGGCAGTaGCTACATAGGACAAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: RFLSELCAGWTQLGFVLSPQDGQ*LHRTSH Trigger: ATGGCTTGTCCTATGTAGCAACTGCCCATCTTGAGG...AGATAGCACAAAACCCAACTGAGTCCATCCTGCACACAGTTCACTTAGGAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 72 bp | TGTTCCAGGTCACTCTCTGTTGATTCTTCTGTGTCCTaGAACCAAACAGGTCATGTCCTCAGCAAGGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: CSRSLSVDSSVS*NQTGHVLSKEF Trigger: GAACTCCTTGCTGAGGACATGACCTGTTTGGTTTCAGGACACAGAAGAATCAACAGAGAGTGACCTGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 72 bp | CTCGAGTGCCAGTTGGTCCAGGCATTTTCCCTAGGGTaGCATATTCATACAATTCCTGATCCCATTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: LECQLVQAFSLG*HIHTIPDPISS Trigger: AGATGAAATGGGATCAGGAATTGTATGAATATGTCACCCTAGGGAAAATGCCTGGACCAACTGGCACTCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 72 bp | CCAACATGCAACCAAAAGCAGTGGAAACCACATCTGTaGTTTGATGTCCCTCTGGGCCTTTCCTTAACAATT | + |
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Preference number: 3 (lower is better) Translates to: PTCNQKQWKPHL*FDVPLGLSLTI Trigger: AATTGTTAAGGAAAGGCCCAGAGGGACATCAAATCACAGATGTGGTTTCCACTGCTTTTGGTTGCATGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 72 bp | GAAATTATGAGTCTCTGGAGTGACTACCTCTCACTGTaGAAAAGGCTCCCTTTACAAGTGATGCTGGTACAG | + |
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Preference number: 3 (lower is better) Translates to: EIMSLWSDYLSL*KRLPLQVMLVQ Trigger: CTGTACCAGCATCACTTGTAAAGGGAGCCTTTTTCACAGTGAGAGGTAGTCACTCCAGAGACTCATAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 72 bp | ATGCTCAGCAATCAGGGAAATTATGAGTCTCTGGAGTaGCTACCTCTCACTGTGAAAAAGGCTCCCTTTACA | + |
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Preference number: 3 (lower is better) Translates to: MLSNQGNYESLE*LPLTVKKAPFT Trigger: TGTAAAGGGAGCCTTTTTCACAGTGAGAGGTAGTCACTCCAGAGACTCATAATTTCCCTGATTGCTGAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CCA 72 bp | ACAGCTAACAGATTCCTAAGTGAACTGTGTGCAGGATaGACTCAGTTGGGTTTTGTGCTATCTTATCATGGC | + |
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Preference number: 3 (lower is better) Translates to: TANRFLSELCAG*TQLGFVLSYHG Trigger: GCCATGATAAGATAGCACAAAACCCAACTGAGTCCATCCTGCACACAGTTCACTTAGGAATCTGTTAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR TCA 72 bp | GGATCAGTCAGTTATGCTCAGCAATCAGGGAAATTATaGGTCTCTGGAGTGACTACCTCTCACTGTGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: GSVSYAQQSGKL*VSGVTTSHCEK Trigger: TTTTTCACAGTGAGAGGTAGTCACTCCAGAGACTCATAATTTCCCTGATTGCTGAGCATAACTGACTGATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 72 bp | ATTTCTACACAAGTCTTAGATTTAAATCCTGTGAGCTaGTGGAACTTCAGCTCAGCAAGGTTGCTTGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: ISTQVLDLNPVS*WNFSSARLLAL Trigger: CAAGGCAAGCAACCTTGCTGAGCTGAAGTTCCAGCAGCTCACAGGATTTAAATCTAAGACTTGTGTAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 72 bp | TCTGGGCCTTTCCTTAACAATTCTGGAAGTCTCTTATaGCTAGCAGGGTCATCTTCAGCCAACAACTTTATT | + |
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Preference number: 3 (lower is better) Translates to: SGPFLNNSGSLL*LAGSSSANNFI Trigger: AATAAAGTTGTTGGCTGAAGATGACCCTGCTAGGCATAAGAGACTTCCAGAATTGTTAAGGAAAGGCCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CAA 90 bp | CCCAATATCGGATTATATCAAAGGATCAGTCAGTTATGCTCAGCAATCAGGGAAGGACTCAGTTGGGTTTaGTGCTATCTTATCATGGCA | + |
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Preference number: 3 (lower is better) Translates to: PNIGLYQRISQLCSAIREGLSWV*CYLIMA Trigger: TGCCATGATAAGATAGCACAAAACCCAACTGAGTCC...TTCCCTGATTGCTGAGCATAACTGACTGATCCTTTGATATAATCCGATATTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CAA 90 bp | CCATTTATGACCCAATATCGGATTATATCAAAGGATCAGTCAGTTATGCTCAGCAACCACATCTGTGATTaGATGTCCCTCTGGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: PFMTQYRIISKDQSVMLSNHICD*MSLWAF Trigger: AAAGGCCCAGAGGGACATCAAATCACAGATGTGGTT...GCTGAGCATAACTGACTGATCCTTTGATATAATCCGATATTGGGTCATAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CAA 90 bp | CCATTTATGACCCAATATCGGATTATATCAAAGGATCAGTCAGTTATGCTCAGCCCAGGTCACTCTCTGTaGATTCTTCTGTGTCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: PFMTQYRIISKDQSVMLSPGHSL*ILLCPE Trigger: TTCAGGACACAGAAGAATCAACAGAGAGTGACCTGG...GCTGAGCATAACTGACTGATCCTTTGATATAATCCGATATTGGGTCATAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CAA 90 bp | AGATTCCTAAGTGAACTGTGTGCAGGATGGACTCAGTTGGGTTTTGTGCTATCTCATTGTGGGGACATTTaGTGGGTTGAGAATTTATTA | + |
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Preference number: 3 (lower is better) Translates to: RFLSELCAGWTQLGFVLSHCGDI*WVENLL Trigger: TAATAAATTCTCAACCCACAAAATGTCCCCACAATG...AGATAGCACAAAACCCAACTGAGTCCATCCTGCACACAGTTCACTTAGGAATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR GCA 72 bp | CCCAATATCGGATTATATCAAAGGATCAGTCAGTTATaGTCAGCAATCAGGGAAATTATGAGTCTCTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: PNIGLYQRISQL*SAIREIMSLWS Trigger: ACTCCAGAGACTCATAATTTCCCTGATTGCTGAGCATAACTGACTGATCCTTTGATATAATCCGATATTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCTGGTACAGCAGTCATTGGGCATAAAAAGAAATGAAGGCAAGCTGATAAAACAAGCCTCTAGACTTTaGATTTTACCAGGTTACAAT | + |
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Preference number: 3 (lower is better) Translates to: MLVQQSLGIKRNEGKLIKQASRL*ILPGYN Trigger: ATTGTAACCTGGTAAAATCAAAAGTCTAGAGGCTTG...TTTTATCAGCTTGCCTTCATTTCTTTTTATGCCCAATGACTGCTGTACCAGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR CCA 90 bp | CCAGCATGGCTGCATCTGAAAGGAGTGCAAAGGGAGCCCTTGGGATTGGTACTGGGAAGCTGTATAATGTaGCCAGGAGCCAGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PAWLHLKGVQREPLGLVLGSCIM*PGARRQ Trigger: CTGCCTCCTGGCTCCTGGCCACATTATACAGCTTCC...CAGTACCAATCCCAAGGGCTCCCTTTGCACTCCTTTCAGATGCAGCCATGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CAA 72 bp | GCATGGCTGCATCTGAAAGGAGTGCAAAGGGAGCCCTaGGGATTGGTACTGGGAAACTGCCAGGAGTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AWLHLKGVQREP*GLVLGNCQEWL Trigger: AAGCCACTCCTGGCAGTTTCCCAGTACCAATCCCAAGGGCTCCCTTTGCACTCCTTTCAGATGCAGCCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR CCA 90 bp | TATGCATCCGCTTCCATAACTCTTCCAAGCCTTGGAGCAGGTGATGTGTGTGTGTGGAGGGTCCTTGACTaGCTGAGCACCCACCATGCC | + |
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Preference number: 4 (lower is better) Translates to: YASASITLPSLGAGDVCVWRVLD*LSTHHA Trigger: GGCATGGTGGGTGCTCAGCCAGTCAAGGACCCTCCA...CACACACACATCACCTGCTCCAAGGCTTGGAAGAGTTATGGAAGCGGATGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CAA 72 bp | CTGCATCTGAAAGGAGTGCAAAGGGAGCCCTTGGGATaGGTACTGGGAAACTGCCAGGAGTGGCTTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LHLKGVQREPLG*VLGNCQEWLVP Trigger: AGGAACAAGCCACTCCTGGCAGTTTCCCAGTACCAATCCCAAGGGCTCCCTTTGCACTCCTTTCAGATGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CAA 72 bp | AACAACACAGCACAGGGAGCAAGACTGTCTCTACAATaGTCCCTCAGCAGCCTGGATCGAGCCTCTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NNTAQGARLSLQ*SLSSLDRASWH Trigger: GTGCCAAGAGGCTCGATCCAGGCTGCTGAGGGACAATTGTAGAGACAGTCTTGCTCCCTGTGCTGTGTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CAA 72 bp | CCTTGGGATTGGTACTGGGAAACTGCCAGGAGTGGCTaGTTCCTAGAGCAGAGTGAACTGAAGCCTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: PWDWYWETARSG*FLEQSELKPSG Trigger: TCCAGAAGGCTTCAGTTCACTCTGCTCTAGGAACAAGCCACTCCTGGCAGTTTCCCAGTACCAATCCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR TCA 90 bp | AGATTCCTAAGTGAACTGTGTGCAGGATGGACTCAGTTGGGTTTTGTGCTATCTCTAATGGAGGGTCCTTaGCTGGCTGAGCACCCACCA | + |
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Preference number: 4 (lower is better) Translates to: RFLSELCAGWTQLGFVLSLMEGP*LAEHPP Trigger: TGGTGGGTGCTCAGCCAGTCAAGGACCCTCCATTAG...AGATAGCACAAAACCCAACTGAGTCCATCCTGCACACAGTTCACTTAGGAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR GCA 90 bp | TTCCACCAGGAGAGGCCATTCAAAGTTACTCTCACTGCATCAGAGGTCCCCTTCCCAGAAGGAGCCATGTaGATTCAGGTAAGACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: FHQERPFKVTLTASEVPFPEGAM*IQVRLG Trigger: ACCAAGTCTTACCTGAATGCACATGGCTCCTTCTGG...GAAGGGGACCTCTGATGCAGTGAGAGTAACTTTGAATGGCCTCTCCTGGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR CCA 90 bp | GCTGCATCTGAAAGGAGTGCAAAGGGAGCCCTTGGGATTGGTACTGGGAAACTGCAGACATCAATACTATaGTCACAGGCACTCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: AASERSAKGALGIGTGKLQTSIL*SQALQV Trigger: TACCTGGAGTGCCTGTGACCATAGTATTGATGTCTG...CAGTTTCCCAGTACCAATCCCAAGGGCTCCCTTTGCACTCCTTTCAGATGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR GCA 90 bp | GTTTATTGGAGCACAGGAGCACAGCTGAGGGATTACTTACAGGAGCACGGGTTGGATGTCAGCAAGATCTaGCTGCAAACTTTTAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VYWSTGAQLRDYLQEHGLDVSKI*LQTFSH Trigger: GTGGCTAAAAGTTTGCAGGCAGATCTTGCTGACATC...CAACCCGTGCTCCTGTAAGTAATCCCTCAGCTGTGCTCCTGTGCTCCAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR TCA 90 bp | TTCATCTTCATGAATCCCCAAGTACATTTCATGCATTTAATTGTGCTTTCCCATGGGTCCTTGACTGGCTaGGCACCCACCATGCCAACT | + |
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Preference number: 4 (lower is better) Translates to: FIFMNPQVHFMHLIVLSHGSLTG*APTMPT Trigger: AGTTGGCATGGTGGGTGCTCAGCCAGTCAAGGACCC...ATGGGAAAGCACAATTAAATGCATGAAATGTACTTGGGGATTCATGAAGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR GCA 90 bp | AGATTCCTAAGTGAACTGTGTGCAGGATGGACTCAGTTGGGTTTTGTGCTATCTCACTATGTTGCACACTaGCAGTCTCAAGGACAACAT | + |
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Preference number: 4 (lower is better) Translates to: RFLSELCAGWTQLGFVLSHYVAH*QSQGQH Trigger: ATGTTGTCCTTGAGACTGGCAGTGTGCAACATAGTG...AGATAGCACAAAACCCAACTGAGTCCATCCTGCACACAGTTCACTTAGGAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CAA 72 bp | AGATTCCTAAGTGAACTGTGTGCAGGATGGACTCAGTaGGGTTTTGTGCTATCTTATCATGGCACTAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RFLSELCAGWTQ*GFVLSYHGTRK Trigger: CTTTCTAGTGCCATGATAAGATAGCACAAAACCCAACTGAGTCCATCCTGCACACAGTTCACTTAGGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR TCA 90 bp | ATGCTGGTACAGCAGTCATTGGGCATAAAAAGAAATGAAGGCAAGCTGATAAAAACTATACCCTGGTCCTaGAGCAAAAGGGAGAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: MLVQQSLGIKRNEGKLIKTIPWS*SKRERV Trigger: TACTCTCTCCCTTTTGCTTCAGGACCAGGGTATAGT...TTTTATCAGCTTGCCTTCATTTCTTTTTATGCCCAATGACTGCTGTACCAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR GCA 90 bp | TGCAAACATAACAATGCCACTATAACACTACAACATACATCTTCCCGGCAAGTAGACAGGCGAAAGAGCTaGATCTGCTTCTTCCCTAAT | + |
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Preference number: 4 (lower is better) Translates to: CKHNNATITLQHTSSRQVDRRKS*ICFFPN Trigger: ATTAGGGAAGAAGCAGATGCAGCTCTTTCGCCTGTC...TACTTGCCGGGAAGATGTATGTTGTAGTGTTATAGTGGCATTGTTATGTTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CAA 72 bp | AGGCTCCCTTTACAAGTGATGCTGGTACAGCAGTCATaGGGCATAAAAAGAAATGAAGGCAAGCTGATAAAA | + |
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Preference number: 4 (lower is better) Translates to: RLPLQVMLVQQS*GIKRNEGKLIK Trigger: TTTTATCAGCTTGCCTTCATTTCTTTTTATGCCCAATGACTGCTGTACCAGCATCACTTGTAAAGGGAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR CCA 90 bp | TTCATCTTCATGAATCCCCAAGTACATTTCATGCATTTAATTGTGCTTTCCCATTCCAGGACCCTTTTGTaGTCCTTCTCCTGGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: FIFMNPQVHFMHLIVLSHSRTLL*SFSWYC Trigger: ACAGTACCAGGAGAAGGACCACAAAAGGGTCCTGGA...ATGGGAAAGCACAATTAAATGCATGAAATGTACTTGGGGATTCATGAAGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| 3UTR CAA 72 bp | TTAAATCTGACTGATAAATCACAAGCCTCTAGACTTTaGATTTTACCAGGTTACAATCCCCAGCAAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: LNLTDKSQASRL*ILPGYNPQQEI Trigger: GATCTCTTGCTGGGGATTGTAACCTGGTAAAATCAAAAGTCTAGAGGCTTGTGATTTATCAGTCAGATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS TCA 90 bp | AAGAGCTGCATCTGCTTCTTCCCTAATGGAGGGTCCTTGACTGGCTaGGCACCCACCATGCCAACTACCTGGTCTCCAGACTCAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: KSCICFFPNGGSLTG*APTMPTTWSPDSAT Trigger: GGTGGCTGAGTCTGGAGACCAGGTAGTTGGCATGGTGGGTGCTCAGCCAGTCAAGGACCCTCCATTAGGGAAGAAGCAGATGCAGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS GCA 90 bp | GGAAGCCCATGGCCTGGTAGAGAGCCTGAGCACTATGTTGCACACTaGCAGTCTCAAGGACAACATCACTGTAACCCTGGTCCCGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: GSPWPGREPEHYVAH*QSQGQHHCNPGPEQ Trigger: TTGCTCGGGACCAGGGTTACAGTGATGTTGTCCTTGAGACTGGCAGTGTGCAACATAGTGCTCAGGCTCTCTACCAGGCCATGGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR CAA 90 bp | TACTGCCTGGGTGACATCAGAGAGGAACGCTCTCCAGAGTCTCCTGGGCCTCTGAATTCCAGGACCCTTTaGTGGTCCTTCTCCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: YCLGDIREERSPESPGPLNSRTL*WSFSWY Trigger: GTACCAGGAGAAGGACCACAAAAGGGTCCTGGAATT...CAGAGGCCCAGGAGACTCTGGAGAGCGTTCCTCTCTGATGTCACCCAGGCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS CCA 90 bp | AGCTGTATAATGTGGCCAGGAGCCAGGAGGCAGACATCAATACTATaGTCACAGGCACTCCAGGTAAGAGCAAGAGAGAATGAGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SCIMWPGARRQTSIL*SQALQVRARENEAV Trigger: CACTGCCTCATTCTCTCTTGCTCTTACCTGGAGTGCCTGTGACCATAGTATTGATGTCTGCCTCCTGGCTCCTGGCCACATTATACAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS TCA 90 bp | ATCAATACTATGGTCACAGGCACTCCAGGTAAGAGCAAGAGAGAATaGGGCAGTGTCAGCATCTGTCGGATGGCAGCAGGAATAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: INTMVTGTPGKSKRE*GSVSICRMAAGISS Trigger: GGAGCTTATTCCTGCTGCCATCCGACAGATGCTGACACTGCCTCATTCTCTCTTGCTCTTACCTGGAGTGCCTGTGACCATAGTATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCCATTCAAAGTTACTCTCACTGCATCAGAGGTCCCCTTCCTCCCTCTGCAGACCCATTAACTTCTaGCTTATACTGACAAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: RGHSKLLSLHQRSPSSLCRPINF*LILTKY Trigger: GTACTTTGTCAGTATAAGCAAGAAGTTAATGGGTCT...GCAGAGGGAGGAAGGGGACCTCTGATGCAGTGAGAGTAACTTTGAATGGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS TCA 72 bp | ATCTGCTTCTTCCCTAATGGAGGGTCCTTGACTGGCTaGGCACCCACCATGCCAACTACCTGGTCTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: ICFFPNGGSLTG*APTMPTTWSPD Trigger: GTCTGGAGACCAGGTAGTTGGCATGGTGGGTGCTCAGCCAGTCAAGGACCCTCCATTAGGGAAGAAGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS TCA 72 bp | ATGGTCACAGGCACTCCAGGTAAGAGCAAGAGAGAATaGGGCAGTGTCAGCATCTGTCGGATGGCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: MVTGTPGKSKRE*GSVSICRMAAG Trigger: TCCTGCTGCCATCCGACAGATGCTGACACTGCCTCATTCTCTCTTGCTCTTACCTGGAGTGCCTGTGACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS GCA 72 bp | CCTCGATGCTGTGAGGACACAGACAGGCGAAAGAGCTaGATCTGCTTCTTCCCTAATGGAGGGTCCTTGACT | + |
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Preference number: 6 (lower is better) Translates to: PRCCEDTDRRKS*ICFFPNGGSLT Trigger: AGTCAAGGACCCTCCATTAGGGAAGAAGCAGATGCAGCTCTTTCGCCTGTCTGTGTCCTCACAGCATCGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS GCA 72 bp | TGGCCTGGTAGAGAGCCTGAGCACTATGTTGCACACTaGCAGTCTCAAGGACAACATCACTGTAACCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: WPGREPEHYVAH*QSQGQHHCNPG Trigger: ACCAGGGTTACAGTGATGTTGTCCTTGAGACTGGCAGTGTGCAACATAGTGCTCAGGCTCTCTACCAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS CAA 72 bp | GAAGCCCATGGCCTGGTAGAGAGCCTGAGCACTATGTaGCACACTGCCAGTCTCAAGGACAACATCACTGTA | + |
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Preference number: 6 (lower is better) Translates to: EAHGLVESLSTM*HTASLKDNITV Trigger: TACAGTGATGTTGTCCTTGAGACTGGCAGTGTGCAACATAGTGCTCAGGCTCTCTACCAGGCCATGGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS CCA 72 bp | ATGTGGCCAGGAGCCAGGAGGCAGACATCAATACTATaGTCACAGGCACTCCAGGTAAGAGCAAGAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: MWPGARRQTSIL*SQALQVRAREN Trigger: ATTCTCTCTTGCTCTTACCTGGAGTGCCTGTGACCATAGTATTGATGTCTGCCTCCTGGCTCCTGGCCACAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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| CDS GCA 72 bp | TGCATTCAGGTAAGACTTGGTGATGTCAGCAAGATCTaGCTGCAAACTTTTAGCCACATAATTTCTGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: CIQVRLGDVSKI*LQTFSHIISAR Trigger: TCTTGCAGAAATTATGTGGCTAAAAGTTTGCAGGCAGATCTTGCTGACATCACCAAGTCTTACCTGAATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045008.8 |
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