Pregenerated sensors for NAT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056426Ensembl transcript IDs: ENSMUST00000070514.4
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGAGAAGATGGTTGACTTaGAGACACCACCCTCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLRRWLT*RHHPPR Trigger: GCGGGGAGGGTGGTGTCTTCAAGTCAACCATCTTCT...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR CCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGCTCTCAGGTGGAAGATaGCAGGAACCTGAGGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLLSGGR*QEPEAD Trigger: ATCAGCCTCAGGTTCCTGCCATCTTCCACCTGAGAG...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR TCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGAGTAGAGAAGATGGTTaGCTTGAAGACACCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLSREDG*LEDTTL Trigger: GAGGGTGGTGTCTTCAAGTCAACCATCTTCTCTACT...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR CCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGTCTCAAACCCTATCATaGCCAGAGCCCAGTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLSQTLS*PEPSRE Trigger: TTCTCTACTGGGCTCTGGCCATGATAGGGTTTGAGA...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR TCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGACTATACTTGCAGGCTaGAGGGACATAAACACATCC | + |
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Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLTILAG*RDINTS Trigger: GGATGTGTTTATGTCCCTTCAGCCTGCAAGTATAGT...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR GCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGGCAAGTCCAGTTTGTTaGTGGACTTCTGGTAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLASPVC*WTSGNQ Trigger: TTGGTTACCAGAAGTCCAGCAACAAACTGGACTTGC...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR CCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGCATGGACTCCGTCTTTaGTATGTAGGGAACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLHGLRL*YVGNKV Trigger: CACTTTGTTCCCTACATACCAAAGACGGAGTCCATG...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR CCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGAGTCCAGTTTGTTGCTaGACTTCTGGTAACCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLSPVCC*TSGNQF Trigger: GAATTGGTTACCAGAAGTCCAGCAACAAACTGGACT...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR TCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGTATATGTTTTGCCACTaGTGGTCACCTGTAGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLYMFCH*WSPVVE Trigger: TTCTACTACAGGTGACCATCAGTGGCAAAACATATA...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR TCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGAGCTTTGTCTCCAAGTaGATTCCAAAAACACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLSFVSK*IPKTLF Trigger: GAAGAGTGTTTTTGGAATTCACTTGGAGACAAAGCT...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR GCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGGCAGGAAAATGGGAATaGACTATCTACAATATATGT | + |
|
Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLAGKWE*TIYNIC Trigger: ACATATATTGTAGATAGTGCATTCCCATTTTCCTGC...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR CCA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGATGGTTTTCCCACAATaGATGTTCAAGTTCTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: FVMISQGFSVCHLILHNLMVFPQ*MFKFSK Trigger: TTTTGAGAACTTGAACATCCATTGTGGGAAAACCAT...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR CAA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGGAGAAGATGGTTGACTaGAAGACACCACCCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: FVMISQGFSVCHLILHNLEKMVD*KTPPSP Trigger: CGGGGAGGGTGGTGTCTTCAAGTCAACCATCTTCTC...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR CAA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGTTCTTGTCTTTTAGTTaGTTCCAGGTACCAGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: FVMISQGFSVCHLILHNLFLSFS*FQVPGS Trigger: GGAACCTGGTACCTGGAACAAACTAAAAGACAAGAA...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS-3UTR CAA 90 bp | TTTGTGATGATATCTCAAGGCTTCTCAGTCTGTCACCTAATTTTGCATAATTTGTCTACAATATATGTTTaGCCACTGATGGTCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FVMISQGFSVCHLILHNLSTIYV*PLMVTC Trigger: ACAGGTGACCATCAGTGGCAAAACATATATTGTAGA...CAAATTATGCAAAATTAGGTGACAGACTGAGAAGCCTTGAGATATCATCACAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS CCA 72 bp | GTGTCCTCTAAGCTCAGTTCCATGGTTTTCCCACAATaGATGTTCAAGTTCTCAAAAGGAATAGCCCGTATC | + |
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Preference number: 6 (lower is better) Translates to: VSSKLSSMVFPQ*MFKFSKGIARI Trigger: GATACGGGCTATTCCTTTTGAGAACTTGAACATCCATTGTGGGAAAACCATGGAACTGAGCTTAGAGGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS CAA 72 bp | CTCCGTCTTTGGTATGTAGGGAACAAAGTGATGTGTTaGTCATCACAGATGTTCGAGATACCTGGTAGTATG | + |
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Preference number: 6 (lower is better) Translates to: LRLWYVGNKVMC*SSQMFEIPGSM Trigger: CATACTACCAGGTATCTCGAACATCTGTGATGACAAACACATCACTTTGTTCCCTACATACCAAAGACGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS CAA 90 bp | AGCCATGGACTCCGTCTTTGGTATGTAGGGAACAAAGTGATGTGTTaGTCATCACAGATGTTCGAGATACCTGGTAGTATGTACTTATAC | + |
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Preference number: 6 (lower is better) Translates to: SHGLRLWYVGNKVMC*SSQMFEIPGSMYLY Trigger: GTATAAGTACATACTACCAGGTATCTCGAACATCTGTGATGACAAACACATCACTTTGTTCCCTACATACCAAAGACGGAGTCCATGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS CAA 90 bp | CATAGCTGGCAGGAAAATGGGAATGCACTATCTACAATATATGTTTaGCCACTGATGGTCACCTGTAGTAGAAGGTGTATCATAGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: HSWQENGNALSTIYV*PLMVTCSRRCIIVL Trigger: TAACACTATGATACACCTTCTACTACAGGTGACCATCAGTGGCAAAACATATATTGTAGATAGTGCATTCCCATTTTCCTGCCAGCTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS TCA 72 bp | ACATTGCCACATTTGGGCACAAGCTTTGTCTCCAAGTaGATTCCAAAAACACTCTTCAGGACTTCTTCTATT | + |
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Preference number: 6 (lower is better) Translates to: TLPHLGTSFVSK*IPKTLFRTSSI Trigger: AATAGAAGAAGTCCTGAAGAGTGTTTTTGGAATTCACTTGGAGACAAAGCTTGTGCCCAAATGTGGCAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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| CDS CCA 72 bp | CAATTTGATGAAAGGTGTCCTCTAAGCTCAGTTCCATaGTTTTCCCACAATGGATGTTCAAGTTCTCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: QFDERCPLSSVP*FSHNGCSSSQK Trigger: CTTTTGAGAACTTGAACATCCATTGTGGGAAAACCATGGAACTGAGCTTAGAGGACACCTTTCATCAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070514.4 |
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