Pregenerated sensors for NAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051147Ensembl transcript IDs: ENSMUST00000093470.7, ENSMUST00000163856.3
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | GCACACATCAACATGACCACCAGTAGTATGATCATGTCACCAGTTTaGATATCTTATCATAAAAATTCCAAGTACATGGAAGGACACCAA | + |
Preference number: 1 (lower is better) Translates to: AHINMTTSSMIMSPV*ISYHKNSKYMEGHQ Trigger: TTGGTGTCCTTCCATGTACTTGGAATTTTTATGATAAGATATTCAAACTGGTGACATGATCATACTACTGGTGGTCATGTTGATGTGTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093470.7 ENSMUST00000163856.3 |
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3UTR CCA 72 bp | CACAAATTCTATATAAATTTAGCTGTAAGCCAATGCTaGGTATTTCCTAGCACACATCAACATGACCACCAG | + |
Preference number: 3 (lower is better) Translates to: HKFYINLAVSQC*VFPSTHQHDHQ Trigger: CTGGTGGTCATGTTGATGTGTGCTAGGAAATACCCAGCATTGGCTTACAGCTAAATTTATATAGAATTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093470.7 ENSMUST00000163856.3 |