Pregenerated sensors for NAT10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027185Ensembl transcript IDs: ENSMUST00000028608.13, ENSMUST00000140895.2, ENSMUST00000148798.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAGGAGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTaGAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTGTGCTGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: SRRGPADPASVSGQV*SEAACASRKPCAGA Trigger: TGCTCCAGCACACGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCTCCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR GCA 90 bp | GTGACTTTGTCTTCAGTCACGGCGGGCATACAGATGGAACGATGGTaGCTGCCTTTGCTGAAGGCCCTTGTCACTGTCACTGTCACTGTC | + |
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Preference number: 1 (lower is better) Translates to: VTLSSVTAGIQMERW*LPLLKALVTVTVTV Trigger: GACAGTGACAGTGACAGTGACAAGGGCCTTCAGCAAAGGCAGGCACCATCGTTCCATCTGTATGCCCGCCGTGACTGAAGACAAAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR GCA 90 bp | AGACTGACCTGGGTGGAACGACAGCCCCTGACAATGCCAGAGCTTTaGCCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTC | + |
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Preference number: 1 (lower is better) Translates to: RLTWVERQPLTMPEL*PHQVLSSLFKSDFV Trigger: GACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGTTCCACCCAGGTCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR CCA 90 bp | AGAGTGACTTTGTCTTCAGTCACGGCGGGCATACAGATGGAACGATaGTGCCTGCCTTTGCTGAAGGCCCTTGTCACTGTCACTGTCACT | + |
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Preference number: 1 (lower is better) Translates to: RVTLSSVTAGIQMER*CLPLLKALVTVTVT Trigger: AGTGACAGTGACAGTGACAAGGGCCTTCAGCAAAGGCAGGCACCATCGTTCCATCTGTATGCCCGCCGTGACTGAAGACAAAGTCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR-3UTR CCA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGGTCCACACTGCTGCCTaGCCTGGCCCAGCAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RQPLTMPELCPHQVLSSLVHTAA*PGPAEH Trigger: GTGCTCTGCTGGGCCAGGCCAGGCAGCAGTGTGGAC...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGGCACAGCAGCCACAGTaGGAGCAAGCCAAAGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RGPADPASVSGQVCSEAAAQQPQ*EQAKVR Trigger: TCTCACTTTGGCTTGCTCCCACTGTGGCTGCTGTGC...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGAACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCTGTCACTGTCCACACTaGTGCCTGGCCTGGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VERQPLTMPELCPHQVLSCHCPH*CLAWPS Trigger: GCTGGGCCAGGCCAGGCAGCAGTGTGGACAGTGACA...GCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGTTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR-3UTR TCA 90 bp | TGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTGTGCTGCAGCCTGTTCAAGAGTaGCTTTGTCTTCAGTCACGG | + |
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Preference number: 2 (lower is better) Translates to: CRDRSAVRQRVPPESRVLQPVQE*LCLQSR Trigger: CCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTG...CAGCACACGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGACAATGCCAGAGCTTTaGCCACACCAAGTTCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: RGPADPASVSGQVCSEAATMPEL*PHQVLS Trigger: GCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGT...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR-3UTR TCA 90 bp | ACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGGTGCCTGCCTTTGCTaGAGGCCCTTGTCACTGTCA | + |
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Preference number: 2 (lower is better) Translates to: TTAPDNARALPTPSSKQPGACLC*RPLSLS Trigger: TGACAGTGACAAGGGCCTTCAGCAAAGGCAGGCACC...AGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR CAA 90 bp | TCTTCAGTCACGGCGGGCATACAGATGGAACGATGGTGCCTGCCTTaGCTGAAGGCCCTTGTCACTGTCACTGTCACTGTCCACACTGCT | + |
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Preference number: 2 (lower is better) Translates to: SSVTAGIQMERWCLP*LKALVTVTVTVHTA Trigger: AGCAGTGTGGACAGTGACAGTGACAGTGACAAGGGCCTTCAGCAAAGGCAGGCACCATCGTTCCATCTGTATGCCCGCCGTGACTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR-3UTR GCA 90 bp | GTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGGGCATACACACTGTCCACACTGCTaGCTGGCCTGGCCCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLSSLFKSDFVFSHGGHTHCPHC*LAWPSR Trigger: TCTGCTGGGCCAGGCCAGGCAGCAGTGTGGACAGTG...TGTATGCCCGCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGCAGGAGAGGTCCTGCTaGCCCAGCCTCAGTGTCGGG | + |
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Preference number: 2 (lower is better) Translates to: RVFLDSLSQMKRQPKGIWQERSC*PSLSVG Trigger: CCCGACACTGAGGCTGGGTCAGCAGGACCTCTCCTG...CCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR GCA 72 bp | TCTTCAGTCACGGCGGGCATACAGATGGAACGATGGTaGCTGCCTTTGCTGAAGGCCCTTGTCACTGTCACT | + |
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Preference number: 3 (lower is better) Translates to: SSVTAGIQMERW*LPLLKALVTVT Trigger: AGTGACAGTGACAAGGGCCTTCAGCAAAGGCAGGCACCATCGTTCCATCTGTATGCCCGCCGTGACTGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR CCA 72 bp | TTGTCTTCAGTCACGGCGGGCATACAGATGGAACGATaGTGCCTGCCTTTGCTGAAGGCCCTTGTCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: LSSVTAGIQMER*CLPLLKALVTV Trigger: GACAGTGACAAGGGCCTTCAGCAAAGGCAGGCACCATCGTTCCATCTGTATGCCCGCCGTGACTGAAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| 3UTR TCA 72 bp | TTGCCCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTaGCTTTGTCTTCAGTCACGGCGGGCATACAGATGG | + |
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Preference number: 3 (lower is better) Translates to: LPTPSSKQPVQE*LCLQSRRAYRW Trigger: CCATCTGTATGCCCGCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGAGAACACCCACGGGCTaGGTGTCCTGCAAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPRTPTG*VSCKLS Trigger: AGAGAGCTTGCAGGACACTCAGCCCGTGGGTGTTCT...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | TGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTGTGCTGAGGCAGAAGAGGTGGTaGGCAGGAGCGTCTGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CRDRSAVRQRVPPESRVLRQKRW*AGASES Trigger: GCTCTCAGACGCTCCTGCTCACCACCTCTTCTGCCT...CAGCACACGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGCCCCATCAACTGGCCTaGGGGCAGCTCAATCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPPHQLA*GQLNLL Trigger: AAGGAGATTGAGCTGCCCTCAGGCCAGTTGATGGGG...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | TGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTGTGCTGATAACACCACAGGACTaGGGGCCGAGCCTTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: CRDRSAVRQRVPPESRVLITPQD*GPSLHS Trigger: ACTGTGAAGGCTCGGCCCTCAGTCCTGTGGTGTTAT...CAGCACACGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | GGAGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCCACATAGAGAGCCATaGGCCGCTGGAGGAAAACTT | + |
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Preference number: 4 (lower is better) Translates to: GEVLLTQPQCRDRSAVRQPHREP*AAGGKL Trigger: AAGTTTTCCTCCAGCGGCTCATGGCTCTCTATGTGG...CTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGACAACCAGCTCAGCCTaGCCCAGTTTCACAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: RGPADPASVSGQVCSEAATTSSA*PSFTAS Trigger: AGATGCTGTGAAACTGGGCCAGGCTGAGCTGGTTGT...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGGTCTGGCTGTCGTTGTaGTCTTGTTCTCAGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPVWLSL*SCSQQW Trigger: CCACTGCTGAGAACAAGACCACAACGACAGCCAGAC...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTTCCGACACTGTCCATaGAATCAGGTCCCCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPFRHCP*NQVPRS Trigger: GCTTCTGGGGACCTGATTCCATGGACAGTGTCGGAA...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGCTGGCAGGGCTGACTTaGCTACGTTCCTGTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPLAGLT*LRSCSE Trigger: TTCAGAACAGGAACGTAGCCAAGTCAGCCCTGCCAG...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGGACCACATCCTTCACTaGCACCATCTGCTCCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: RGPADPASVSGQVCSEAADHILH*HHLLLN Trigger: ATTGAGGAGCAGATGGTGGCAGTGAAGGATGTGGTC...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | GGAGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGATTTCAAGACAGCTTTaGCCTGGTCCAGGGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GEVLLTQPQCRDRSAVRQISRQL*PGPGSC Trigger: GCAAGACCCTGGACCAGGCCAAAGCTGTCTTGAAAT...CTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGAATTCAAACAGCGTGTaGAGGTTATCCGGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: RGPADPASVSGQVCSEAANSNSV*RLSGLG Trigger: CCCAAGCCCGGATAACCTCCACACGCTGTTTGAATT...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | GGAGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGAGCTGATCGTCAATaGCCAGACACTTCTTACAAG | + |
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Preference number: 4 (lower is better) Translates to: GEVLLTQPQCRDRSAVRQRADRQ*PDTSYK Trigger: CTTGTAAGAAGTGTCTGGTCATTGACGATCAGCTCG...CTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | TGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTGTGCTGCGTTCCTGTTCTGAATaGTGTTCAGAGACAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: CRDRSAVRQRVPPESRVLRSCSE*CSETGQ Trigger: CTGCCCTGTCTCTGAACATCATTCAGAACAGGAACG...CAGCACACGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | TGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTGTGCTGACAAAAAGAGACCTCTaGCGCTCAGCTACGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: CRDRSAVRQRVPPESRVLTKRDL*RSATPF Trigger: GAATGGCGTAGCTGAGCGGCAGAGGTCTCTTTTTGT...CAGCACACGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GGAGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGATTTTCTTCTGTAGCTaGCGCATCCTCTTCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: GEVLLTQPQCRDRSAVRQIFFCS*RILFFR Trigger: CCGGAAGAAGAGGATGCGGCAGCTACAGAAGAAAAT...CTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | ACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTAAAAGTGCCTCCAGATaGTCCCGGCCTAGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TTAPDNARALPTPSSKQPKSASR*SRPRAG Trigger: GCCAGCCCTAGGCCGGGAGCATCTGGAGGCACTTTT...AGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | TGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTGTGCTGATCTCCTTTTCCAGCTaGTCCACAGACTTGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: CRDRSAVRQRVPPESRVLISFSS*STDLCC Trigger: ACAGCACAAGTCTGTGGATCAGCTGGAAAAGGAGAT...CAGCACACGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GTGGAACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCCCTGGTCCAGGGTCTTaGAGCAGTCCACCAGAACAC | + |
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Preference number: 4 (lower is better) Translates to: VERQPLTMPELCPHQVLSPGPGS*SSPPEH Trigger: GTGTTCTGGTGGACTGCTGCAAGACCCTGGACCAGG...GCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGTTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGGGAGGCATTCTGCCCTaGTTTGCTCAAAACTTCATT | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPGGILP*FAQNFI Trigger: AATGAAGTTTTGAGCAAAGCAGGGCAGAATGCCTCC...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | ACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTTCAATGCTGGCCACGTaGGAGGAGATGGGCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: TTAPDNARALPTPSSKQPSMLAT*EEMGRM Trigger: CATCCTGCCCATCTCCTCCCACGTGGCCAGCATTGA...AGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGAAGGCCTCCAAAGTCTaGATCTTGAAACTGTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPKASKV*ILKLFR Trigger: TCGGAACAGTTTCAAGATCCAGACTTTGGAGGCCTT...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGGGTGCGGATTTCTTGTaGTGTCTCCAAGACTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPGADFL*CLQDFF Trigger: GAAAAAGTCTTGGAGACACCACAAGAAATCCGCACC...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | GGAGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCTATTCAAAATGGACTaGCGAGAAATCTCTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GEVLLTQPQCRDRSAVRQLFKMD*REISPS Trigger: TGAGGGAGAGATTTCTCGTCAGTCCATTTTGAATAG...CTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GTGGAACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCGCGTCTGAGAGCATCTaGAGGTCGTTGGGAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: VERQPLTMPELCPHQVLSASESI*RSLGEF Trigger: GAACTCTCCCAACGACCTGCAGATGCTCTCAGACGC...GCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGTTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GTGGAACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCTACATCTGCAGCAGCTaGAGCGCTCGGCTGCCATAT | + |
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Preference number: 4 (lower is better) Translates to: VERQPLTMPELCPHQVLSYICSS*SARLPY Trigger: ATATGGCAGCCGAGCGCTGCAGCTGCTGCAGATGTA...GCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGTTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGATCCTCTTCTTCCGGTaGCTGCTAAATCCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RQPLTMPELCPHQVLSSLILFFR*LLNPSS Trigger: AGAGCTGGGATTTAGCAGTCACCGGAAGAAGAGGAT...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | ACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTCCCCAGAAGCCTTCTTaGCTCGAGAGAGGCTATTCA | + |
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Preference number: 4 (lower is better) Translates to: TTAPDNARALPTPSSKQPPQKPS*LERGYS Trigger: TGAATAGCCTCTCTCGAGGCAAGAAGGCTTCTGGGG...AGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTCAATAGCCTTTTCCTaGACATCATTGAACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ASVSGQVCSEAACASRKPSIAFS*TSLNSF Trigger: GAAGCTGTTCAATGATGTGCAGGAAAAGGCTATTGA...CGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | TGTCGGGACAGGTCTGCAGTGAGGCAGCGTGTGCCTCCAGAAAGCCGTGTGCTGCTGTTTCTACAGTTCTaGCCAACAAGTTCGGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CRDRSAVRQRVPPESRVLLFLQF*PTSSEL Trigger: TAACTCCGAACTTGTTGGCCAGAACTGTAGAAACAG...CAGCACACGGCTTTCTGGAGGCACACGCTGCCTCACTGCAGACCTGTCCCGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGGCTCAGATGTTGCAGCCTACCACGTGGGAGGAGATaGGCAGGATGTCGAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPNEEATKRHLGLRCCSLPRGRR*AGCRAD Trigger: ATCAGCTCGACATCCTGCCCATCTCCTCCCACGTGG...TAGGCTGCAACATCTGAGCCCCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR TCA 90 bp | AGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGAGCTTGAGGGACAGTaGCCGGCCAGTGCCCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVFLDSLSQMKRQPKGIWELEGQ*PASALV Trigger: TACGAGGGCACTGGCCGGTCACTGTCCCTCAAGCTC...CCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR TCA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGCCAAAGTCTGGATCTTaGAACTGTTCCGACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQPLTMPELCPHQVLSSLPKSGS*NCSDTV Trigger: GACAGTGTCGGAACAGTTTCAAGATCCAGACTTTGG...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | CCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGGTGCTGAACTGGTATaGCAGCAAGGCCAGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: PHQVLSSLFKSDFVFSHGGAELV*QQGQEP Trigger: CGGTTCCTGGCCTTGCTGTCATACCAGTTCAGCACC...GCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGCCGAGCCTTCACAGTTaGCTTGGACAACATATGATG | + |
|
Preference number: 4 (lower is better) Translates to: RQPLTMPELCPHQVLSSLPSLHS*LGQHMM Trigger: CATCATATGTTGTCCAAGGCAACTGTGAAGGCTCGG...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR GCA 90 bp | CTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGGCTCAGATGTTGCAGCCTAGAGGTAAGGCTTCAATaGTGGCCACGTGGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPNEEATKRHLGLRCCSLEVRLQ*WPRGRR Trigger: TCTCCTCCCACGTGGCCAGCATTGAAGCCTTACCTC...TAGGCTGCAACATCTGAGCCCCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCGCAGGGCATTCTGGGTaGGGGGCACAGGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGIAGHSG*GAQVAG Trigger: TCCTGCCACCTGTGCCCCCCACCCAGAATGCCCTGC...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR GCA 90 bp | GTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGGGCATACATGGAGGGAAACCTCATaGAAGGTTCGAGCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSSLFKSDFVFSHGGHTWRETS*KVRAEA Trigger: GGCCTCAGCTCGAACCTTGCATGAGGTTTCCCTCCA...TGTATGCCCGCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | AGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGCCAGCCAAGCTCCCTaGTCAGCCTCATCCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: RVFLDSLSQMKRQPKGIWASQAP*SASSSS Trigger: CGATGAGGATGAGGCTGAGCAGGGAGCTTGGCTGGC...CCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR GCA 90 bp | GTGGAACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCTTCACTGCCACCATCTaGTCCTCAATAGCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VERQPLTMPELCPHQVLSFTATI*SSIAFS Trigger: GGAAAAGGCTATTGAGGAGCAGATGGTGGCAGTGAA...GCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGTTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CCA 90 bp | GTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGGGCATACAGTAAGGCTTCAATGCTaGCCACGTGGGAGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VLSSLFKSDFVFSHGGHTVRLQC*PRGRRW Trigger: CCATCTCCTCCCACGTGGCCAGCATTGAAGCCTTAC...TGTATGCCCGCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGGCTCAGATGTTGCAGCCTAAAAAGCCCCATCAACTaGCCTGAGGGCAGCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LPNEEATKRHLGLRCCSLKSPIN*PEGSSI Trigger: GATTGAGCTGCCCTCAGGCCAGTTGATGGGGCTTTT...TAGGCTGCAACATCTGAGCCCCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR TCA 90 bp | CCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCCAGGAGAGAAGGTGCTaGACTGGTATGACAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQVLSSLFKSDFVFSHGQERRC*TGMTAR Trigger: CCTTGCTGTCATACCAGTTCAGCACCTTCTCTCCTG...GCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGCACACCTGGACAACTaGAAGCACTTCAGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVFLDSLSQMKRQPKGIWAHLDN*KHFRQG Trigger: GCCCTGCCTGAAGTGCTTGCAGTTGTCCAGGTGTGC...CCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | CTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGGCTCAGATGTTGCAGCCTAGTAATCCAGGCGCTCTaGAGGCCTCTCATTCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LPNEEATKRHLGLRCCSLVIQAL*RPLIQL Trigger: AAGTTGAATGAGAGGCCTGCAGAGCGCCTGGATTAC...TAGGCTGCAACATCTGAGCCCCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CCA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGGAGGTTATCCGGGCTTaGGGAGGTAACAAAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: RQPLTMPELCPHQVLSSLEVIRA*GGNKNI Trigger: AATATTTTTGTTACCTCCCCAAGCCCGGATAACCTC...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGCATCCCTTGATAATCTaGGTGAACAGCAATTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQPLTMPELCPHQVLSSLHPLII*VNSNSN Trigger: GTTCGAATTGCTGTTCACCCAGATTATCAAGGGATG...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCCTCGTTTCCAGAACTTaGGAAGCCTGGGGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGILVSRT*EAWGSA Trigger: GGCTGACCCCCAGGCTTCTCAAGTTCTGGAAACGAG...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR GCA 90 bp | GTGGAACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCACATGCCGAAAGTATTaGCCAGAATCTTGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VERQPLTMPELCPHQVLSTCRKY*PESCGF Trigger: AAACCCACAAGATTCTGGGCAATACTTTCGGCATGT...GCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGTTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CCA 90 bp | AGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGAAGACAGCTTTGGCCTaGTCCAGGGTCTTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVFLDSLSQMKRQPKGIWKTALA*SRVLQQ Trigger: CTGCTGCAAGACCCTGGACCAGGCCAAAGCTGTCTT...CCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCAGGGGCGTATCGGATTaGCTCTTGGAGGGAAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGIRGVSD*LLEGNL Trigger: GAGGTTTCCCTCCAAGAGTCAATCCGATACGCCCCT...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | CCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGCTACGTTCCTGTTCTaGATGATGTTCAGAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQVLSSLFKSDFVFSHGATFLF*MMFRDR Trigger: CCTGTCTCTGAACATCATTCAGAACAGGAACGTAGC...GCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGTCCTGTACCTGGAATaGACATCCATAGTCATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHQVLSSLFKSDFVFSHGVLYLE*TSIVIV Trigger: CACGATGACTATGGATGTGCATTCCAGGTACAGGAC...GCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | CTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGGCTCAGATGTTGCAGCCTACAGTTTCACAGCATCTaGAGGGTGGATGTACTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPNEEATKRHLGLRCCSLQFHSI*RVDVLN Trigger: ATTCAGTACATCCACCCTGCAGATGCTGTGAAACTG...TAGGCTGCAACATCTGAGCCCCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCATAGGGAAGGAAAAGTaGCTCCAGATGCTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGIIGKEK*LQMLPA Trigger: GGCCGGGAGCATCTGGAGGCACTTTTCCTTCCCTAT...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGGGCATACAGCGAATGTTTGTGGCTaGTACAAAAAGCTCAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLSSLFKSDFVFSHGGHTANVCG*YKKLKG Trigger: CCCTTTGAGCTTTTTGTAGCAGCCACAAACATTCGC...TGTATGCCCGCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | AGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGCCTGGAGGACACACATaGCGAAAGTATTGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVFLDSLSQMKRQPKGIWPGGHT*RKYCPE Trigger: TTCTGGGCAATACTTTCGGCATGTGTGTCCTCCAGG...CCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | GTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGGGCATACAAACGCTTCAAAATCCTaGAGGACACACATGCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLSSLFKSDFVFSHGGHTNASKS*RTHMPK Trigger: TTTCGGCATGTGTGTCCTCCAGGATTTTGAAGCGTT...TGTATGCCCGCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | CTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGGCTCAGATGTTGCAGCCTACTACGCCATTCTCAATaGGAATTCGAATTCGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LPNEEATKRHLGLRCCSLLRHSQ*EFEFGY Trigger: ATAACCGAATTCGAATTCTCATTGAGAATGGCGTAG...TAGGCTGCAACATCTGAGCCCCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | CCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCTCAAAGGGGTCATCTTaGTTTAAGTTCAAGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHQVLSSLFKSDFVFSHGSKGSS*FKFKVP Trigger: TGGGACCTTGAACTTAAAGCAAGATGACCCCTTTGA...GCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR GCA 90 bp | CCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCCATTCTGCCCTGCTTTaGTCAAAACTTCATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PHQVLSSLFKSDFVFSHGHSALL*SKLHST Trigger: AGTGGAATGAAGTTTTGAGCAAAGCAGGGCAGAATG...GCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR TCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCCCGAGATCCCCTCAATaGATTTCAAGACAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGIPRSPQ*ISRQLW Trigger: CCAAAGCTGTCTTGAAATTCATTGAGGGGATCTCGG...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR GCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCGAAATCTTTCCAAAATaGTGCCAGCCAAGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGIEIFPK*CQPSSL Trigger: CAGGGAGCTTGGCTGGCAGCATTTTGGAAAGATTTC...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | AGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGTATCGGATTGACTCTTaGAGGGAAACCTCATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVFLDSLSQMKRQPKGIWYRIDS*RETSCK Trigger: CTTGCATGAGGTTTCCCTCCAAGAGTCAATCCGATA...CCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCGCCATTGATAGTAGATaGCATGAAAACCAGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGIAIDSR*HENQVG Trigger: CCCTACCTGGTTTTCATGGCATCTACTATCAATGGC...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR GCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCACAATGGAGGCATTCTaGCCTGCTTTGCTCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGITMEAF*PALLKT Trigger: AGTTTTGAGCAAAGCAGGGCAGAATGCCTCCATTGT...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS-3UTR CCA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCAGAGGCTATTCAAAATaGACTGACGAGAAATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRVFLDSLSQMKRQPKGIRGYSK*TDEKSL Trigger: GAGAGATTTCTCGTCAGTCCATTTTGAATAGCCTCT...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGCAGGGGCGTATCGGATaGACTCTTGGAGGGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: RGPADPASVSGQVCSEAAQGRIG*TLGGKP Trigger: AGGTTTCCCTCCAAGAGTCAATCCGATACGCCCCTG...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 90 bp | GCCTGGTCCAGGGTCTTGCAGCAGTCCACCAGAACACCCACGGGCTaGGTGTCCTGCAAGCTCTCTTTCAACTCCAGCAGCTCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AWSRVLQQSTRTPTG*VSCKLSFNSSSSRA Trigger: TGCTCTGGAGCTGCTGGAGTTGAAAGAGAGCTTGCAGGACACTCAGCCCGTGGGTGTTCTGGTGGACTGCTGCAAGACCCTGGACCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCTGCTGACGGAGTTGTaGAATGAGCTTGAGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GEVLLTQPQCRDRSAVRQLLTEL*NELEGQ Trigger: CTGTCCCTCAAGCTCATTCAACAACTCCGTCAGCAG...CTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGTTGCGGATGATCCGGTaGAAAAGCCCCATCAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GEVLLTQPQCRDRSAVRQLRMIR*KSPINW Trigger: CCAGTTGATGGGGCTTTTCAACCGGATCATCCGCAA...CTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGGCCGAGCCTTCACAGTaGCCTTGGACAACATATGAT | + |
|
Preference number: 5 (lower is better) Translates to: RGPADPASVSGQVCSEAAAEPSQ*PWTTYD Trigger: ATCATATGTTGTCCAAGGCAACTGTGAAGGCTCGGC...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGGCCTGGTCCAGGGTCTaGCAGCAGTCCACCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RQPLTMPELCPHQVLSSLAWSRV*QQSTRT Trigger: TGTTCTGGTGGACTGCTGCAAGACCCTGGACCAGGC...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGGCCATATCCCATCCCTaGATAATCTGGGTGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGPADPASVSGQVCSEAAAISHP*IIWVNS Trigger: GCTGTTCACCCAGATTATCAAGGGATGGGATATGGC...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 90 bp | AGCCACTTCTCCACTGCATCCCCAGGGGCGTATCGGATTGACTCTTaGAGGGAAACCTCATGCAAGGTTCGAGCTGAGGCCAGTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHFSTASPGAYRIDS*RETSCKVRAEASLA Trigger: AGCCAGACTGGCCTCAGCTCGAACCTTGCATGAGGTTTCCCTCCAAGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGAGAAGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS GCA 90 bp | GTTATCCGGGCTTGGGGAGGTAACAAAAATATTGGAATACCCGAATaGCACTGCTCCAGCGATAGCCAGGCCCAGGGCCGCAGACTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VIRAWGGNKNIGIPE*HCSSDSQAQGRRLA Trigger: GGCAAGTCTGCGGCCCTGGGCCTGGCTATCGCTGGAGCAGTGGCATTCGGGTATTCCAATATTTTTGTTACCTCCCCAAGCCCGGATAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGAACAGCTTCACAACTTaGCGGATGATCCGGTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RGPADPASVSGQVCSEAANSFTT*RMIRLK Trigger: TTTCAACCGGATCATCCGCAAAGTTGTGAAGCTGTT...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 90 bp | GCTTCAATGCTGGCCACGTGGGAGGAGATGGGCAGGATGTCGAGCTaGTCGTCAATGACCAGACACTTCTTACAAGAGGCCAGAGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASMLATWEEMGRMSS*SSMTRHFLQEARER Trigger: TCTCTCTCTGGCCTCTTGTAAGAAGTGTCTGGTCATTGACGATCAGCTCGACATCCTGCCCATCTCCTCCCACGTGGCCAGCATTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 90 bp | CTGGGCACTCTGCTGACGGAGTTGTTGAATGAGCTTGAGGGACAGTaGCCGGCCAGTGCCCTCGTAGCCATTGATAGTAGATGCCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGTLLTELLNELEGQ*PASALVAIDSRCHE Trigger: TTCATGGCATCTACTATCAATGGCTACGAGGGCACTGGCCGGTCACTGTCCCTCAAGCTCATTCAACAACTCCGTCAGCAGAGTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 90 bp | AGCCCCATCAACTGGCCTGAGGGCAGCTCAATCTCCTTTTCCAGCTaGTCCACAGACTTGTGCTGTAGGCCAATTCCCAAGAGAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPINWPEGSSISFSS*STDLCCRPIPKRRA Trigger: GGCTCTTCTCTTGGGAATTGGCCTACAGCACAAGTCTGTGGATCAGCTGGAAAAGGAGATTGAGCTGCCCTCAGGCCAGTTGATGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGAATTTCAAGACAGCTTaGGCCTGGTCCAGGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RQPLTMPELCPHQVLSSLNFKTA*AWSRVL Trigger: CAAGACCCTGGACCAGGCCAAAGCTGTCTTGAAATT...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGGCTCAGATGTTGCAGCCTAACGATGCGGGTGATGTaGAGGCAATCCAGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPNEEATKRHLGLRCCSLTMRVM*RQSRHS Trigger: GCTGTGCCTGGATTGCCTCAACATCACCCGCATCGT...TAGGCTGCAACATCTGAGCCCCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | AGAGGTCCTGCTGACCCAGCCTCAGTGTCGGGACAGGTCTGCAGTGAGGCAGCGTTTTCCTGCACATCATaGAACAGCTTCACAACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPADPASVSGQVCSEAAFSCTS*NSFTTL Trigger: CAAAGTTGTGAAGCTGTTCAATGATGTGCAGGAAAA...CGCTGCCTCACTGCAGACCTGTCCCGACACTGAGGCTGGGTCAGCAGGACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS GCA 90 bp | AACCGTCTTCGGAAATCTTTCCAAAATGCTGCCAGCCAAGCTCCCTaGTCAGCCTCATCCTCATCGGCCAGCGTCTTCAGCATAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NRLRKSFQNAASQAP*SASSSSASVFSIMH Trigger: GTGCATTATGCTGAAGACGCTGGCCGATGAGGATGAGGCTGAGCAGGGAGCTTGGCTGGCAGCATTTTGGAAAGATTTCCGAAGACGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | GTGGAACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCACTCTGCTGACGGAGTaGTTGAATGAGCTTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VERQPLTMPELCPHQVLSTLLTE*LNELEG Trigger: TCCCTCAAGCTCATTCAACAACTCCGTCAGCAGAGT...GCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 90 bp | TCCCCAGAAGCCTTCTTGCCTCGAGAGAGGCTATTCAAAATGGACTaGCGAGAAATCTCTCCCTCAAGGCACACCTGGACAACTGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPEAFLPRERLFKMD*REISPSRHTWTTAS Trigger: GCTTGCAGTTGTCCAGGTGTGCCTTGAGGGAGAGATTTCTCGTCAGTCCATTTTGAATAGCCTCTCTCGAGGCAAGAAGGCTTCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 90 bp | TCAGGTCCCCAGAAGCCTTCTTGCCTCGAGAGAGGCTATTCAAAATaGACTGACGAGAAATCTCTCCCTCAAGGCACACCTGGACAACTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPQKPSCLERGYSK*TDEKSLPQGTPGQL Trigger: CAGTTGTCCAGGTGTGCCTTGAGGGAGAGATTTCTCGTCAGTCCATTTTGAATAGCCTCTCTCGAGGCAAGAAGGCTTCTGGGGACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | CGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTGAGCAGTAGCGAATGTTaGTGGCTGCTACAAAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RQPLTMPELCPHQVLSSLSSSEC*WLLQKA Trigger: AGCTTTTTGTAGCAGCCACAAACATTCGCTACTGCT...CAGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | ACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTCACATGCCGAAAGTATaGCCCAGAATCTTGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TTAPDNARALPTPSSKQPHMPKV*PRILWV Trigger: AACCCACAAGATTCTGGGCAATACTTTCGGCATGTG...AGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCCCAGTCTGGCTGTCGTaGTGGTCTTGTTCTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PHQVLSSLFKSDFVFSHGPVWLS*WSCSQQ Trigger: CTGCTGAGAACAAGACCACAACGACAGCCAGACTGG...GCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 90 bp | AACAGCAATTCGAACAACCCGTCCACCAGAAAGGCCTCCAAAGTCTaGATCTTGAAACTGTTCCGACACTGTCCATGGAATCAGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSNSNNPSTRKASKV*ILKLFRHCPWNQVP Trigger: GGGGACCTGATTCCATGGACAGTGTCGGAACAGTTTCAAGATCCAGACTTTGGAGGCCTTTCTGGTGGACGGGTTGTTCGAATTGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 90 bp | TTCCAACAAGCTGACAGCCTCACTGCTCACGGTGCGGATTTCTTGTaGTGTCTCCAAGACTTTTTCCTCCAGACAAGGGAACTTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQQADSLTAHGADFL*CLQDFFLQTRELAF Trigger: GAAGGCAAGTTCCCTTGTCTGGAGGAAAAAGTCTTGGAGACACCACAAGAAATCCGCACCGTGAGCAGTGAGGCTGTCAGCTTGTTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 90 bp | CCGGTGACTGCTAAATCCCAGCTCTTTCTTATAACACCACAGGACTaGGGGCCGAGCCTTCACAGTTGCCTTGGACAACATATGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PVTAKSQLFLITPQD*GPSLHSCLGQHMMK Trigger: CTTCATCATATGTTGTCCAAGGCAACTGTGAAGGCTCGGCCCTCAGTCCTGTGGTGTTATAAGAAAGAGCTGGGATTTAGCAGTCACCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 |
||
| CDS TCA 90 bp | GCCAGAGAGAGAATAAACCTCTCGTTAAATCTTCCCACCACGTCCTaGTGGGCCTCAGTCCTGTACCTGGAATGCACATCCATAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ARERINLSLNLPTTS*WASVLYLECTSIVI Trigger: GATGACTATGGATGTGCATTCCAGGTACAGGACTGAGGCCCATCAGGACGTGGTGGGAAGATTTAACGAGAGGTTTATTCTCTCTCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS GCA 90 bp | TTTCTTGTGGTGTCTCCAAGACTTTTTCCTCCAGACAAGGGAACTTaGCTTCATAATACATCTGCAGCAGCTGCAGCGCTCGGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLVVSPRLFPPDKGT*LHNTSAAAAALGCH Trigger: ATGGCAGCCGAGCGCTGCAGCTGCTGCAGATGTATTATGAAGGCAAGTTCCCTTGTCTGGAGGAAAAAGTCTTGGAGACACCACAAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 90 bp | AGGTCCATGTCCTTCAGCTTCCCGACTTCCTTCTTGTGTTTCTCCTaGAATTCCTTTGCTGCTTCATCCAGGTCATCACTCAGGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSMSFSFPTSFLCFS*NSFAASSRSSLRVF Trigger: GAAGACCCTGAGTGATGACCTGGATGAAGCAGCAAAGGAATTCCAGGAGAAACACAAGAAGGAAGTCGGGAAGCTGAAGGACATGGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | GTAAGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCGCTCGTTTCCAGAACTaGAGAAGCCTGGGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VRVFLDSLSQMKRQPKGIARFQN*RSLGVS Trigger: GCTGACCCCCAGGCTTCTCAAGTTCTGGAAACGAGC...GATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGGGCTCAGATGTTGCAGCCTATTCCCGACTTCCTTCTaGTGTTTCTCCTGGAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPNEEATKRHLGLRCCSLFPTSF*CFSWNS Trigger: GGAATTCCAGGAGAAACACAAGAAGGAAGTCGGGAA...TAGGCTGCAACATCTGAGCCCCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | ACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTCTCTTCTTCAACTTCTaGCTCTGTTTGGGTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TTAPDNARALPTPSSKQPLFFNF*LCLGSC Trigger: ACAAGAACCCAAACAGAGCAAGAAGTTGAAGAAGAG...AGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 90 bp | AATGATGTTCAGAGACAGGGCAGGAGAGAAGGTGCTGAACTGGTATaGCAGCAAGGCCAGGAACCGTCTTCGGAAATCTTTCCAAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: NDVQRQGRREGAELV*QQGQEPSSEIFPKC Trigger: GCATTTTGGAAAGATTTCCGAAGACGGTTCCTGGCCTTGCTGTCATACCAGTTCAGCACCTTCTCTCCTGCCCTGTCTCTGAACATCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | GTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGGGCATACATCTCCTGGAATTCCTTaGCTGCTTCATCCAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLSSLFKSDFVFSHGGHTSPGIP*LLHPGH Trigger: ATGACCTGGATGAAGCAGCAAAGGAATTCCAGGAGA...TGTATGCCCGCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | CCACACCAAGTTCTAAGCAGCCTGTTCAAGAGTGACTTTGTCTTCAGTCACGGCGCATTCTGCCCTGCTTaGCTCAAAACTTCATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PHQVLSSLFKSDFVFSHGAFCPA*LKTSFH Trigger: GTGGAATGAAGTTTTGAGCAAAGCAGGGCAGAATGC...GCCGTGACTGAAGACAAAGTCACTCTTGAACAGGCTGCTTAGAACTTGGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | ACGACAGCCCCTGACAATGCCAGAGCTTTGCCCACACCAAGTTCTAAGCAGCCTAACTTCTTGCTCTGTTaGGGTTCTTGTTTTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTAPDNARALPTPSSKQPNFLLC*GSCFVS Trigger: GGAAACAAAACAAGAACCCAAACAGAGCAAGAAGTT...AGGCTGCTTAGAACTTGGTGTGGGCAAAGCTCTGGCATTGTCAGGGGCTGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS-3UTR CAA 90 bp | AGAGTCTTTCTCGATAGTCTCTCCCAAATGAAGAGGCAACCAAAAGGCATCTGGTCCAAAGTCTGGATCTaGAAACTGTTCCGACACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RVFLDSLSQMKRQPKGIWSKVWI*KLFRHC Trigger: ACAGTGTCGGAACAGTTTCAAGATCCAGACTTTGGA...CCAGATGCCTTTTGGTTGCCTCTTCATTTGGGAGAGACTATCGAGAAAGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 90 bp | TCCTTTAAATACAAATTCAAACAGCGTGTGGAGGTTATCCGGGCTTaGGGAGGTAACAAAAATATTGGAATACCCGAATGCCACTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFKYKFKQRVEVIRA*GGNKNIGIPECHCS Trigger: GGAGCAGTGGCATTCGGGTATTCCAATATTTTTGTTACCTCCCCAAGCCCGGATAACCTCCACACGCTGTTTGAATTTGTATTTAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 90 bp | CCAGAATCTTGTGGGTTTCATTGTAGTAGCAGTAGCGAATGTTTGTaGCTGCTACAAAAAGCTCAAAGGGGTCATCTTGCTTTAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PESCGFHCSSSSECL*LLQKAQRGHLALSS Trigger: TGAACTTAAAGCAAGATGACCCCTTTGAGCTTTTTGTAGCAGCCACAAACATTCGCTACTGCTACTACAATGAAACCCACAAGATTCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 |
||
| CDS CCA 90 bp | TACTGCAGAGCATCAAATCCTTTAAATACAAATTCAAACAGCGTGTaGAGGTTATCCGGGCTTGGGGAGGTAACAAAAATATTGGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: YCRASNPLNTNSNSV*RLSGLGEVTKILEY Trigger: GTATTCCAATATTTTTGTTACCTCCCCAAGCCCGGATAACCTCCACACGCTGTTTGAATTTGTATTTAAAGGATTTGATGCTCTGCAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CAA 90 bp | CCGAATGCCACTGCTCCAGCGATAGCCAGGCCCAGGGCCGCAGACTaGCCCCTTCCTCGGGCAGCGGTGAGGGCTACAGTACTCCTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PNATAPAIARPRAAD*PLPRAAVRATVLLR Trigger: TCTAAGGAGTACTGTAGCCCTCACCGCTGCCCGAGGAAGGGGCAAGTCTGCGGCCCTGGGCCTGGCTATCGCTGGAGCAGTGGCATTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 72 bp | CCAGGGCCGCAGACTTGCCCCTTCCTCGGGCAGCGGTaGGGGCTACAGTACTCCTTAGAGTCTTCTCCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGPQTCPFLGQR*GLQYSLESSPR Trigger: TCTCGGAGAAGACTCTAAGGAGTACTGTAGCCCTCACCGCTGCCCGAGGAAGGGGCAAGTCTGCGGCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 72 bp | TCTCATCCGGGGCCTGAGGAGGTAAGGCTTCAATGCTaGCCACGTGGGAGGAGATGGGCAGGATGTCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SHPGPEEVRLQC*PRGRRWAGCRA Trigger: AGCTCGACATCCTGCCCATCTCCTCCCACGTGGCCAGCATTGAAGCCTTACCTCCTCAGGCCCCGGATGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 72 bp | TCCAGAGCAGCAGGACTGAGATTCTCATCCGGGGCCTaGGGAGGTAAGGCTTCAATGCTGGCCACGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRAAGLRFSSGA*GGKASMLATWE Trigger: CTCCCACGTGGCCAGCATTGAAGCCTTACCTCCTCAGGCCCCGGATGAGAATCTCAGTCCTGCTGCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 72 bp | GCCGACTGGGCAGCCGACAGGGACAGGTCTCCTAGCTaGTTCAGGAAGTACAAGCGGGAAATGGCTGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: ADWAADRDRSPS*FRKYKREMAGI Trigger: TATCCCAGCCATTTCCCGCTTGTACTTCCTGAACCAGCTAGGAGACCTGTCCCTGTCGGCTGCCCAGTCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CAA 90 bp | TCACAGGCCTCAGGCAAGGGGCAGCCGGAAACGATGCGGGTGATGTaGAGGCAATCCAGGCACAGCAGGTCATTAAGCCACTTCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SQASGKGQPETMRVM*RQSRHSRSLSHFST Trigger: AGTGGAGAAGTGGCTTAATGACCTGCTGTGCCTGGATTGCCTCAACATCACCCGCATCGTTTCCGGCTGCCCCTTGCCTGAGGCCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 72 bp | AGGGTCTTGCAGCAGTCCACCAGAACACCCACGGGCTaGGTGTCCTGCAAGCTCTCTTTCAACTCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RVLQQSTRTPTG*VSCKLSFNSSS Trigger: GCTGCTGGAGTTGAAAGAGAGCTTGCAGGACACTCAGCCCGTGGGTGTTCTGGTGGACTGCTGCAAGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 72 bp | TCCACTGCATCCCCAGGGGCGTATCGGATTGACTCTTaGAGGGAAACCTCATGCAAGGTTCGAGCTGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: STASPGAYRIDS*RETSCKVRAEA Trigger: GGCCTCAGCTCGAACCTTGCATGAGGTTTCCCTCCAAGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 72 bp | TTGTGCTGTAGGCCAATTCCCAAGAGAAGAGCCGACTaGGCAGCCGACAGGGACAGGTCTCCTAGCTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCCRPIPKRRAD*AADRDRSPSWF Trigger: GAACCAGCTAGGAGACCTGTCCCTGTCGGCTGCCCAGTCGGCTCTTCTCTTGGGAATTGGCCTACAGCACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CAA 72 bp | TCAGGCAAGGGGCAGCCGGAAACGATGCGGGTGATGTaGAGGCAATCCAGGCACAGCAGGTCATTAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGKGQPETMRVM*RQSRHSRSLSH Trigger: GTGGCTTAATGACCTGCTGTGCCTGGATTGCCTCAACATCACCCGCATCGTTTCCGGCTGCCCCTTGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 72 bp | CTGGCCACGTGGGAGGAGATGGGCAGGATGTCGAGCTaGTCGTCAATGACCAGACACTTCTTACAAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LATWEEMGRMSS*SSMTRHFLQEA Trigger: GGCCTCTTGTAAGAAGTGTCTGGTCATTGACGATCAGCTCGACATCCTGCCCATCTCCTCCCACGTGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 72 bp | CCACTTCTCCACTGCATCCCCAGGGGCGTATCGGATTaGCTCTTGGAGGGAAACCTCATGCAAGGTTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLLHCIPRGVSD*LLEGNLMQGSS Trigger: GCTCGAACCTTGCATGAGGTTTCCCTCCAAGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGAGAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS GCA 72 bp | GGGGCGTATCGGATTGACTCTTGGAGGGAAACCTCATaGAAGGTTCGAGCTGAGGCCAGTCTGGCTGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: GAYRIDSWRETS*KVRAEASLAVV Trigger: AACGACAGCCAGACTGGCCTCAGCTCGAACCTTGCATGAGGTTTCCCTCCAAGAGTCAATCCGATACGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CCA 72 bp | GGGAAACCTCATGCAAGGTTCGAGCTGAGGCCAGTCTaGCTGTCGTTGTGGTCTTGTTCTCAGCAGTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GKPHARFELRPV*LSLWSCSQQWC Trigger: GCACCACTGCTGAGAACAAGACCACAACGACAGCCAGACTGGCCTCAGCTCGAACCTTGCATGAGGTTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS CAA 72 bp | GCCACTTCTCCACTGCATCCCCAGGGGCGTATCGGATaGACTCTTGGAGGGAAACCTCATGCAAGGTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATSPLHPQGRIG*TLGGKPHARFE Trigger: CTCGAACCTTGCATGAGGTTTCCCTCCAAGAGTCAATCCGATACGCCCCTGGGGATGCAGTGGAGAAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
||
| CDS TCA 72 bp | TCTCTTTCAACTCCAGCAGCTCCAGAGCAGCAGGACTaGGATTCTCATCCGGGGCCTGAGGAGGTAAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLSTPAAPEQQD*DSHPGPEEVRL Trigger: AAGCCTTACCTCCTCAGGCCCCGGATGAGAATCTCAGTCCTGCTGCTCTGGAGCTGCTGGAGTTGAAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 90 bp | AACAGCGTGTGGAGGTTATCCGGGCTTGGGGAGGTAACAAAAATATaGGAATACCCGAATGCCACTGCTCCAGCGATAGCCAGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: NSVWRLSGLGEVTKI*EYPNATAPAIARPR Trigger: CCTGGGCCTGGCTATCGCTGGAGCAGTGGCATTCGGGTATTCCAATATTTTTGTTACCTCCCCAAGCCCGGATAACCTCCACACGCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS TCA 72 bp | CTGCTGACGGAGTTGTTGAATGAGCTTGAGGGACAGTaGCCGGCCAGTGCCCTCGTAGCCATTGATAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: LLTELLNELEGQ*PASALVAIDSR Trigger: TCTACTATCAATGGCTACGAGGGCACTGGCCGGTCACTGTCCCTCAAGCTCATTCAACAACTCCGTCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS GCA 72 bp | GGAGGTAACAAAAATATTGGAATACCCGAATGCCACTaGTCCAGCGATAGCCAGGCCCAGGGCCGCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: GGNKNIGIPECH*SSDSQAQGRRL Trigger: AAGTCTGCGGCCCTGGGCCTGGCTATCGCTGGAGCAGTGGCATTCGGGTATTCCAATATTTTTGTTACCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CCA 72 bp | CAGCGCTCGGCTGCCATATCCCATCCCTTGATAATCTaGGTGAACAGCAATTCGAACAACCCGTCCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: QRSAAISHPLII*VNSNSNNPSTR Trigger: TCTGGTGGACGGGTTGTTCGAATTGCTGTTCACCCAGATTATCAAGGGATGGGATATGGCAGCCGAGCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS TCA 72 bp | GGGAGGAGATGGGCAGGATGTCGAGCTGATCGTCAATaGCCAGACACTTCTTACAAGAGGCCAGAGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GRRWAGCRADRQ*PDTSYKRPERE Trigger: TTCTCTCTCTGGCCTCTTGTAAGAAGTGTCTGGTCATTGACGATCAGCTCGACATCCTGCCCATCTCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS GCA 72 bp | GGTCTTCATAGTGGGCTCCATGACCACATCCTTCACTaGCACCATCTGCTCCTCAATAGCCTTTTCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GLHSGLHDHILH*HHLLLNSLFLH Trigger: GTGCAGGAAAAGGCTATTGAGGAGCAGATGGTGGCAGTGAAGGATGTGGTCATGGAGCCCACTATGAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CCA 72 bp | GGTGAGCAGGAGCGTCTGAGAGCATCTGCAGGTCGTTaGGAGAGTTCTTGTAATGAGAAGCCACATAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: GEQERLRASAGR*ESSCNEKPHRE Trigger: CTCTCTATGTGGCTTCTCATTACAAGAACTCTCCCAACGACCTGCAGATGCTCTCAGACGCTCCTGCTCACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 72 bp | CAAGCTGACAGCCTCACTGCTCACGGTGCGGATTTCTaGTGGTGTCTCCAAGACTTTTTCCTCCAGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: QADSLTAHGADF*WCLQDFFLQTR Trigger: CCTTGTCTGGAGGAAAAAGTCTTGGAGACACCACAAGAAATCCGCACCGTGAGCAGTGAGGCTGTCAGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 90 bp | TTCTTCCAACAAGCTGACAGCCTCACTGCTCACGGTGCGGATTTCTaGTGGTGTCTCCAAGACTTTTTCCTCCAGACAAGGGAACTTGCC | + |
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Preference number: 6 (lower is better) Translates to: FFQQADSLTAHGADF*WCLQDFFLQTRELA Trigger: GGCAAGTTCCCTTGTCTGGAGGAAAAAGTCTTGGAGACACCACAAGAAATCCGCACCGTGAGCAGTGAGGCTGTCAGCTTGTTGGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS TCA 72 bp | GCCTTCTTGCCTCGAGAGAGGCTATTCAAAATGGACTaGCGAGAAATCTCTCCCTCAAGGCACACCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: AFLPRERLFKMD*REISPSRHTWT Trigger: TGTCCAGGTGTGCCTTGAGGGAGAGATTTCTCGTCAGTCCATTTTGAATAGCCTCTCTCGAGGCAAGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS GCA 72 bp | TACCTGGAATGCACATCCATAGTCATCGTGTACAGCTaGTTAAGCGAGTTCATGGTCCGCAGGAGGATGACC | + |
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Preference number: 6 (lower is better) Translates to: YLECTSIVIVYS*LSEFMVRRRMT Trigger: GGTCATCCTCCTGCGGACCATGAACTCGCTTAAGCAGCTGTACACGATGACTATGGATGTGCATTCCAGGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 |
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| CDS CAA 72 bp | TGGAGGTTATCCGGGCTTGGGGAGGTAACAAAAATATaGGAATACCCGAATGCCACTGCTCCAGCGATAGCC | + |
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Preference number: 6 (lower is better) Translates to: WRLSGLGEVTKI*EYPNATAPAIA Trigger: GGCTATCGCTGGAGCAGTGGCATTCGGGTATTCCAATATTTTTGTTACCTCCCCAAGCCCGGATAACCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 72 bp | TCATTGAACAGCTTCACAACTTTGCGGATGATCCGGTaGAAAAGCCCCATCAACTGGCCTGAGGGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SLNSFTTLRMIR*KSPINWPEGSS Trigger: TGAGCTGCCCTCAGGCCAGTTGATGGGGCTTTTCAACCGGATCATCCGCAAAGTTGTGAAGCTGTTCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 90 bp | TCCTGCACATCATTGAACAGCTTCACAACTTTGCGGATGATCCGGTaGAAAAGCCCCATCAACTGGCCTGAGGGCAGCTCAATCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SCTSLNSFTTLRMIR*KSPINWPEGSSISF Trigger: AAAGGAGATTGAGCTGCCCTCAGGCCAGTTGATGGGGCTTTTCAACCGGATCATCCGCAAAGTTGTGAAGCTGTTCAATGATGTGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS TCA 72 bp | GCTAAATCCCAGCTCTTTCTTATAACACCACAGGACTaGGGGCCGAGCCTTCACAGTTGCCTTGGACAACAT | + |
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Preference number: 6 (lower is better) Translates to: AKSQLFLITPQD*GPSLHSCLGQH Trigger: ATGTTGTCCAAGGCAACTGTGAAGGCTCGGCCCTCAGTCCTGTGGTGTTATAAGAAAGAGCTGGGATTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 |
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| CDS TCA 72 bp | CAGTACTCCTTAGAGTCTTCTCCGAGATCCCCTCAATaGATTTCAAGACAGCTTTGGCCTGGTCCAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: QYSLESSPRSPQ*ISRQLWPGPGS Trigger: AGACCCTGGACCAGGCCAAAGCTGTCTTGAAATTCATTGAGGGGATCTCGGAGAAGACTCTAAGGAGTACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CCA 72 bp | TCGAACAACCCGTCCACCAGAAAGGCCTCCAAAGTCTaGATCTTGAAACTGTTCCGACACTGTCCATGGAAT | + |
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Preference number: 6 (lower is better) Translates to: SNNPSTRKASKV*ILKLFRHCPWN Trigger: ATTCCATGGACAGTGTCGGAACAGTTTCAAGATCCAGACTTTGGAGGCCTTTCTGGTGGACGGGTTGTTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 72 bp | GAGAGGTCCATGTCCTTCAGCTTCCCGACTTCCTTCTaGTGTTTCTCCTGGAATTCCTTTGCTGCTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ERSMSFSFPTSF*CFSWNSFAASS Trigger: GGATGAAGCAGCAAAGGAATTCCAGGAGAAACACAAGAAGGAAGTCGGGAAGCTGAAGGACATGGACCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 72 bp | TCCCGACTTCCTTCTTGTGTTTCTCCTGGAATTCCTTaGCTGCTTCATCCAGGTCATCACTCAGGGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SRLPSCVSPGIP*LLHPGHHSGSS Trigger: TGAAGACCCTGAGTGATGACCTGGATGAAGCAGCAAAGGAATTCCAGGAGAAACACAAGAAGGAAGTCGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS TCA 72 bp | AAAGAGACCTCTGCCGCTCAGCTACGCCATTCTCAATaGGAATTCGAATTCGGTTATCCACCTTCTTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: KETSAAQLRHSQ*EFEFGYPPSSD Trigger: ATCGGAAGAAGGTGGATAACCGAATTCGAATTCTCATTGAGAATGGCGTAGCTGAGCGGCAGAGGTCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 ENSMUST00000148798.2 |
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| CDS GCA 72 bp | TTTCCTCGATCCCCAACTACAACAAAAAGAGACCTCTaGCGCTCAGCTACGCCATTCTCAATGAGAATTCGA | + |
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Preference number: 6 (lower is better) Translates to: FPRSPTTTKRDL*RSATPFSMRIR Trigger: TCGAATTCTCATTGAGAATGGCGTAGCTGAGCGGCAGAGGTCTCTTTTTGTTGTAGTTGGGGATCGAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 ENSMUST00000148798.2 |
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| CDS CCA 72 bp | CCACCAGTCCACCACCTTCTACTGTTTCTACAGTTCTaGCCAACAAGTTCGGAGTTAACGCTTCAAAATCCT | + |
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Preference number: 6 (lower is better) Translates to: PPVHHLLLFLQF*PTSSELTLQNP Trigger: AGGATTTTGAAGCGTTAACTCCGAACTTGTTGGCCAGAACTGTAGAAACAGTAGAAGGTGGTGGACTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 |
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| CDS CCA 72 bp | TGTGGGTTTCATTGTAGTAGCAGTAGCGAATGTTTGTaGCTGCTACAAAAAGCTCAAAGGGGTCATCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: CGFHCSSSSECL*LLQKAQRGHLA Trigger: AGCAAGATGACCCCTTTGAGCTTTTTGTAGCAGCCACAAACATTCGCTACTGCTACTACAATGAAACCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 |
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| CDS CCA 72 bp | TACAAATTCAAACAGCGTGTGGAGGTTATCCGGGCTTaGGGAGGTAACAAAAATATTGGAATACCCGAATGC | + |
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Preference number: 6 (lower is better) Translates to: YKFKQRVEVIRA*GGNKNIGIPEC Trigger: GCATTCGGGTATTCCAATATTTTTGTTACCTCCCCAAGCCCGGATAACCTCCACACGCTGTTTGAATTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 90 bp | TGCCCAGAATCTTGTGGGTTTCATTGTAGTAGCAGTAGCGAATGTTaGTGGCTGCTACAAAAAGCTCAAAGGGGTCATCTTGCTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: CPESCGFHCSSSSEC*WLLQKAQRGHLALS Trigger: ACTTAAAGCAAGATGACCCCTTTGAGCTTTTTGTAGCAGCCACAAACATTCGCTACTGCTACTACAATGAAACCCACAAGATTCTGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 |
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| CDS GCA 72 bp | GTCACTTTTCAAACTAACAATGGAGGCATTCTGCCCTaGTTTGCTCAAAACTTCATTCCACTCTTCATCGTC | + |
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Preference number: 6 (lower is better) Translates to: VTFQTNNGGILP*FAQNFIPLFIV Trigger: GACGATGAAGAGTGGAATGAAGTTTTGAGCAAAGCAGGGCAGAATGCCTCCATTGTTAGTTTGAAAAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CAA 72 bp | TCTTGTGGGTTTCATTGTAGTAGCAGTAGCGAATGTTaGTGGCTGCTACAAAAAGCTCAAAGGGGTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: SCGFHCSSSSEC*WLLQKAQRGHL Trigger: AAGATGACCCCTTTGAGCTTTTTGTAGCAGCCACAAACATTCGCTACTGCTACTACAATGAAACCCACAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028608.13 ENSMUST00000140895.2 |
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| CDS GCA 72 bp | TTCTTGTCACTTTTCAAACTAACAATGGAGGCATTCTaGCCTGCTTTGCTCAAAACTTCATTCCACTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FLSLFKLTMEAF*PALLKTSFHSS Trigger: TGAAGAGTGGAATGAAGTTTTGAGCAAAGCAGGGCAGAATGCCTCCATTGTTAGTTTGAAAAGTGACAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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| CDS CCA 72 bp | GCATCAAATCCTTTAAATACAAATTCAAACAGCGTGTaGAGGTTATCCGGGCTTGGGGAGGTAACAAAAATA | + |
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Preference number: 6 (lower is better) Translates to: ASNPLNTNSNSV*RLSGLGEVTKI Trigger: TATTTTTGTTACCTCCCCAAGCCCGGATAACCTCCACACGCTGTTTGAATTTGTATTTAAAGGATTTGATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028608.13 |
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