Pregenerated sensors for NAT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025588

Ensembl transcript IDs: ENSMUST00000026677.4, ENSMUST00000212171.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 72 bp	AAGATACAACAAGTCATTAGTTGGTCAGCATTGGACTaGGTGATTTCTGTTATGGATACATTTGCATATGTT	+
Preference number: 3 (lower is better) Translates to: KIQQVISWSALD*VISVMDTFAYV Trigger: AACATATGCAAATGTATCCATAACAGAAATCACCCAGTCCAATGCTGACCAACTAATGACTTGTTGTATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026677.4 ENSMUST00000212171.2
CDS TCA 72 bp	CTCCATAGGCGGAATCCACAATGTACTTCCTGTCACTaGTGGTCACCTGTACTAGAAGGTGGACCATTTCAC	+
Preference number: 6 (lower is better) Translates to: LHRRNPQCTSCH*WSPVLEGGPFH Trigger: GTGAAATGGTCCACCTTCTAGTACAGGTGACCATCAGTGACAGGAAGTACATTGTGGATTCCGCCTATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026677.4 ENSMUST00000212171.2
CDS TCA 72 bp	GTACTAGAAGGTGGACCATTTCACTGCTATATTTGCTaGCTGGAGTTATGTAAACATATCCTCCCAACATTG	+
Preference number: 6 (lower is better) Translates to: VLEGGPFHCYIC*LELCKHILPTL Trigger: CAATGTTGGGAGGATATGTTTACATAACTCCAGTCAGCAAATATAGCAGTGAAATGGTCCACCTTCTAGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026677.4 ENSMUST00000212171.2
CDS CCA 72 bp	CAAGGAACAGAACGATGTGCTTACAAACACAGATGCTaGCGATGTCTGAAGATAGCTATTCACATATTCAAA	+
Preference number: 6 (lower is better) Translates to: QGTERCAYKHRC*RCLKIAIHIFK Trigger: TTTGAATATGTGAATAGCTATCTTCAGACATCGCCAGCATCTGTGTTTGTAAGCACATCGTTCTGTTCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026677.4 ENSMUST00000212171.2
CDS GCA 72 bp	CACCATGTTTGGGCACAAACTTTCTCTCCAAAGAAATaGCAAATGCGGTTTTCAGTACATCTTCTATTTCTT	+
Preference number: 6 (lower is better) Translates to: HHVWAQTFSPKK*QMRFSVHLLFL Trigger: AAGAAATAGAAGATGTACTGAAAACCGCATTTGGCATTTCTTTGGAGAGAAAGTTTGTGCCCAAACATGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026677.4 ENSMUST00000212171.2

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