Pregenerated sensors for NARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018995Ensembl transcript IDs: ENSMUST00000044466.12, ENSMUST00000107159.3, ENSMUST00000122835.8, ENSMUST00000150681.3
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGATCTTGCTAGTCGCTGCTCTAGGACGTGGTACCGTTCCTCCCTaGGGCTACCTCCAAAGAGCTCCCCAACTCCAGGAACCAGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: LILLVAALGRGTVPP*GYLQRAPQLQEPED Trigger: ATCTTCTGGTTCCTGGAGTTGGGGAGCTCTTTGGAGGTAGCCTCAGGGAGGAACGGTACCACGTCCTAGAGCAGCGACTAGCAAGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122835.8 |
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| 3UTR TCA 90 bp | CAAACAACAAGGGGAAATGAGCTACCAATGAAAGGCAAAGCAGGGTaGGACATGGCTATCAAGTCAGAGTCCCTGAGGAACGCTGAGATC | + |
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Preference number: 1 (lower is better) Translates to: QTTRGNELPMKGKAG*DMAIKSESLRNAEI Trigger: GATCTCAGCGTTCCTCAGGGACTCTGACTTGATAGCCATGTCTCACCCTGCTTTGCCTTTCATTGGTAGCTCATTTCCCCTTGTTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR CCA 90 bp | CACAACCTAAACTGGTTAAAAACTAACCAAAGGGAGGGCCAGGCCTaGTTGTGCCCAACTGAGGTCAAGGGCAGTTTGGTCTACTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: HNLNWLKTNQREGQA*LCPTEVKGSLVYLE Trigger: TTCTAAGTAGACCAAACTGCCCTTGACCTCAGTTGGGCACAACCAGGCCTGGCCCTCCCTTTGGTTAGTTTTTAACCAGTTTAGGTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR CCA 90 bp | CGGATGCCCCCTTTCAGTCTCTGTGGGTGGTGCCAGGCATGTAACTaGTGTACATACATGTATGTAGAGAAAACAACCAGATACATAAAA | + |
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Preference number: 1 (lower is better) Translates to: RMPPFSLCGWCQACN*CTYMYVEKTTRYIK Trigger: TTTTATGTATCTGGTTGTTTTCTCTACATACATGTATGTACACCAGTTACATGCCTGGCACCACCCACAGAGACTGAAAGGGGGCATCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR TCA 90 bp | ACGCAAATACAGGCGTGTCCCGGCGCTGTAAGACCTCTGTGGAAATaGTGTTTTAGTTTATACAAAGTAATTGCTTTTGTCCAAGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: TQIQACPGAVRPLWK*CFSLYKVIAFVQGA Trigger: AGCACCTTGGACAAAAGCAATTACTTTGTATAAACTAAAACATCATTTCCACAGAGGTCTTACAGCGCCGGGACACGCCTGTATTTGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR GCA 90 bp | ACCCAGAGCCCCAAGTGTGCTAGCCAAATGCTCTTACCTCTGAACTaGATTTCTAGTTCAAGTGTGGTTTTAAATACACACGCAAATACA | + |
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Preference number: 1 (lower is better) Translates to: TQSPKCASQMLLPLN*ISSSSVVLNTHANT Trigger: TGTATTTGCGTGTGTATTTAAAACCACACTTGAACTAGAAATGCAGTTCAGAGGTAAGAGCATTTGGCTAGCACACTTGGGGCTCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR GCA 90 bp | CTGGTCACATTCTATCAGGCCACACCATATTCTAAAATTACCCATTaGGTAGGTTTGGCCACATTTCCAACACCACCTTCCATTAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: LVTFYQATPYSKITH*VGLATFPTPPSIKD Trigger: ATCTTTAATGGAAGGTGGTGTTGGAAATGTGGCCAAACCTACGCAATGGGTAATTTTAGAATATGGTGTGGCCTGATAGAATGTGACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR CCA 90 bp | TCCCTCTCATTGGTCCCTAAACTTAGCATGCAAGGGAAAGTAGACTaGGGCTGGGACTTTACCTTAGCAATTATCCTGATTATAAAGATT | + |
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Preference number: 1 (lower is better) Translates to: SLSLVPKLSMQGKVD*GWDFTLAIILIIKI Trigger: AATCTTTATAATCAGGATAATTGCTAAGGTAAAGTCCCAGCCCCAGTCTACTTTCCCTTGCATGCTAAGTTTAGGGACCAATGAGAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR TCA 90 bp | CAGACTGCAAACACCCAGTCTTTTCTACACATACTCATGTGTAGATaGGGTGATGGAGCACTTTCCATTAAACAGTCTTTCAGCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: QTANTQSFLHILMCR*GDGALSIKQSFSYK Trigger: TTTGTAGCTGAAAGACTGTTTAATGGAAAGTGCTCCATCACCTCATCTACACATGAGTATGTGTAGAAAAGACTGGGTGTTTGCAGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122835.8 ENSMUST00000150681.3 |
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| 3UTR CAA 90 bp | AGGGAGGGCCAGGCCTGGTTGTGCCCAACTGAGGTCAAGGGCAGTTaGGTCTACTTAGAAAGTTCCAGGACAGTCAGGGCTATACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: REGQAWLCPTEVKGS*VYLESSRTVRAIQN Trigger: ATTCTGTATAGCCCTGACTGTCCTGGAACTTTCTAAGTAGACCAAACTGCCCTTGACCTCAGTTGGGCACAACCAGGCCTGGCCCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR GCA 90 bp | TGGGGAGATGGTTCAGCAGTTAAGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGACTAGCTGGACAACATaGCCAGTCCTAATTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: WGDGSAVKRTGWSSRGARTSWTT*PVLIEV Trigger: TACCTCAATTAGGACTGGGCATGTTGTCCAGCTAGT...CCTGGCTCCTCTGGAAGACCAGCCAGTCCTCTTAACTGCTGAACCATCTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR CAA 90 bp | CGTTCAAATCCCATCCCGAAGCCTCCATGGGGCACAGATCCAAACTaGCGAAGATCCAGGTACAGGGGAATGGAAGCACAAGTAACAATC | + |
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Preference number: 2 (lower is better) Translates to: RSNPIPKPPWGTDPN*RRSRYRGMEAQVTI Trigger: GATTGTTACTTGTGCTTCCATTCCCCTGTACCTGGATCTTCGCAAGTTTGGATCTGTGCCCCATGGAGGCTTCGGGATGGGATTTGAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150681.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGACTGGTACCGTTCCTCCCTaGGGCTACCTCCAAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: ALSISPWGSLSVHEKPLTGTVPP*GYLQRA Trigger: AGCTCTTTGGAGGTAGCCTCAGGGAGGAACGGTACC...AGTCAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122835.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACACATCCATGAAAAGCCTTTaGCTTAAGATGATCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: RGLAGLPEEPGSIPSKHTSMKSL*LKMIKT Trigger: GGTCTTGATCATCTTAAGTCAAAGGCTTTTCATGGA...TGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR CCA 90 bp | AGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACACATGCCAGGCATGTAACTaGTGTACATACATGTATGTA | + |
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Preference number: 2 (lower is better) Translates to: RGLAGLPEEPGSIPSKHTCQACN*CTYMYV Trigger: TACATACATGTATGTACACCAGTTACATGCCTGGCA...TGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR CCA 90 bp | CTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGATCCCGAAGCCTCCATaGGGCACAGATCCAAACTTG | + |
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Preference number: 2 (lower is better) Translates to: LALSISPWGSLSVHEKPLIPKPP*GTDPNL Trigger: CAAGTTTGGATCTGTGCCCCATGGAGGCTTCGGGAT...CAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122835.8 ENSMUST00000150681.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCCACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGGTCCCTGAGGAACGCTaGGATCCTACACTTCCATAT | + |
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Preference number: 2 (lower is better) Translates to: SPLALSISPWGSLSVHEKVPEER*DPTLPY Trigger: ATATGGAAGTGTAGGATCTCAGCGTTCCTCAGGGAC...CTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR CCA 90 bp | AGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACACATCATGTAAGTTTAAATaGCAAGGAAGAAAAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RGLAGLPEEPGSIPSKHTSCKFK*QGRKGS Trigger: TGACCCTTTTCTTCCTTGCCATTTAAACTTACATGA...TGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGACTGTAAAGGCGAAGTTCTaGGATGCTTGCTTTAAGATC | + |
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Preference number: 2 (lower is better) Translates to: ALSISPWGSLSVHEKPLTVKAKF*DACFKI Trigger: GATCTTAAAGCAAGCATCCCAGAACTTCGCCTTTAC...AGTCAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122835.8 |
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| 3UTR CAA 90 bp | ACAACATGCCCAGTCCTAATTGAGGTAACAGATTTGAAAGTCCACTaGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAA | + |
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Preference number: 2 (lower is better) Translates to: TTCPVLIEVTDLKVH*LLVFLLGGVYLSMK Trigger: TTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACTTTCAAATCTGTTACCTCAATTAGGACTGGGCATGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGACTACAAGAATTGTGCACTaGAATCCACATTTCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: ALSISPWGSLSVHEKPLTTRIVH*NPHFQT Trigger: AGTCTGGAAATGTGGATTTCAGTGCACAATTCTTGT...AGTCAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044466.12 ENSMUST00000122835.8 ENSMUST00000150681.3 |
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| 3UTR-3UTR TCA 90 bp | CACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTACAAGAATTGTGCACTaGAATCCACATTTCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: HLLLVFLLGGVYLSMKSLTRIVH*NPHFQT Trigger: AGTCTGGAAATGTGGATTTCAGTGCACAATTCTTGT...AAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044466.12 ENSMUST00000122835.8 ENSMUST00000150681.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGACTTCCATGAAAAGCCTTTaGCTTAAGATGATCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: ALSISPWGSLSVHEKPLTSMKSL*LKMIKT Trigger: GGTCTTGATCATCTTAAGTCAAAGGCTTTTCATGGA...AGTCAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000044466.12 ENSMUST00000122835.8 ENSMUST00000150681.3 |
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| 3UTR CAA 90 bp | TTCTATCAGGCCACACCATATTCTAAAATTACCCATTGCGTAGGTTaGGCCACATTTCCAACACCACCTTCCATTAAAGATACCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: FYQATPYSKITHCVG*ATFPTPPSIKDTFL Trigger: AAGAAAGGTATCTTTAATGGAAGGTGGTGTTGGAAATGTGGCCAAACCTACGCAATGGGTAATTTTAGAATATGGTGTGGCCTGATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR TCA 90 bp | ACATGCCCAGTCCTAATTGAGGTAACAGATTTGAAAGTCCACTTGCTCTTAGTAGAGTTTATCTGTCCATaGAAAGCCTTTGACTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: TCPVLIEVTDLKVHLLLVEFICP*KAFDLR Trigger: TCTTAAGTCAAAGGCTTTTCATGGACAGATAAACTC...TACTAAGAGCAAGTGGACTTTCAAATCTGTTACCTCAATTAGGACTGGGCATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000150681.3 |
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| 3UTR-3UTR GCA 90 bp | ATTAGAAACAGTGAAGAATCAGAGAACCAATACAGGCAGATAGAGAAGACAGATAGCCAACTGTTTTTCTaGCTGATCATGCCAGTGATA | + |
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Preference number: 2 (lower is better) Translates to: IRNSEESENQYRQIEKTDSQLFF*LIMPVI Trigger: TATCACTGGCATGATCAGGCAGAAAAACAGTTGGCT...ATCTGTCTTCTCTATCTGCCTGTATTGGTTCTCTGATTCTTCACTGTTTCTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCCACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCGAATGAGTAAACCTTaGAAAAGGGATAACATCTTT | + |
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Preference number: 2 (lower is better) Translates to: SPLALSISPWGSLSVHEKRMSKP*KRDNIF Trigger: AAAGATGTTATCCCTTTTCCAAGGTTTACTCATTCG...CTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000122835.8 ENSMUST00000150681.3 |
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| 3UTR TCA 72 bp | CTAGTCGCTGCTCTAGGACGTGGTACCGTTCCTCCCTaGGGCTACCTCCAAAGAGCTCCCCAACTCCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: LVAALGRGTVPP*GYLQRAPQLQE Trigger: TTCCTGGAGTTGGGGAGCTCTTTGGAGGTAGCCTCAGGGAGGAACGGTACCACGTCCTAGAGCAGCGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122835.8 |
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| 3UTR GCA 72 bp | ATCCCCAAACACATGGCCCAGGCAGGAGGTGCTCTCTaGATTAGGCAGGACAACCCAGTCAACCTCTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: IPKHMAQAGGAL*IRQDNPVNLLG Trigger: ACCTAAGAGGTTGACTGGGTTGTCCTGCCTAATGCAGAGAGCACCTCCTGCCTGGGCCATGTGTTTGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR GCA 72 bp | CCATCCCGAAGCCTCCATGGGGCACAGATCCAAACTTaGGAAGATCCAGGTACAGGGGAATGGAAGCACAAG | + |
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Preference number: 3 (lower is better) Translates to: PSRSLHGAQIQT*EDPGTGEWKHK Trigger: CTTGTGCTTCCATTCCCCTGTACCTGGATCTTCGCAAGTTTGGATCTGTGCCCCATGGAGGCTTCGGGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150681.3 |
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| 3UTR CCA 72 bp | GGCTGGGGAGATGGTTCAGCAGTTAAGAGGACTGGCTaGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWGDGSAVKRTG*SSRGARFYSQQ Trigger: TTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCTTAACTGCTGAACCATCTCCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR CCA 72 bp | GTAAGTCCTGATCTTGCTAGTCGCTGCTCTAGGACGTaGTACCGTTCCTCCCTGAGGCTACCTCCAAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: VSPDLASRCSRT*YRSSLRLPPKS Trigger: GCTCTTTGGAGGTAGCCTCAGGGAGGAACGGTACCACGTCCTAGAGCAGCGACTAGCAAGATCAGGACTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122835.8 |
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| 3UTR CCA 72 bp | CCAGGGGATCGGATGCCCCCTTTCAGTCTCTGTGGGTaGTGCCAGGCATGTAACTGGTGTACATACATGTAT | + |
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Preference number: 3 (lower is better) Translates to: PGDRMPPFSLCG*CQACNWCTYMY Trigger: ATACATGTATGTACACCAGTTACATGCCTGGCACCACCCACAGAGACTGAAAGGGGGCATCCGATCCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR GCA 72 bp | GGGGATCGGATGCCCCCTTTCAGTCTCTGTGGGTGGTaGCAGGCATGTAACTGGTGTACATACATGTATGTA | + |
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Preference number: 3 (lower is better) Translates to: GDRMPPFSLCGW*QACNWCTYMYV Trigger: TACATACATGTATGTACACCAGTTACATGCCTGGCACCACCCACAGAGACTGAAAGGGGGCATCCGATCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR CAA 90 bp | TGGGGAGATGGTTCAGCAGTTAAGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGCTCAAAGCACAAGAATaGTGCACTGAAATCCACATT | + |
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Preference number: 3 (lower is better) Translates to: WGDGSAVKRTGWSSRGARLKAQE*CTEIHI Trigger: AATGTGGATTTCAGTGCACAATTCTTGTGCTTTGAG...CCTGGCTCCTCTGGAAGACCAGCCAGTCCTCTTAACTGCTGAACCATCTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR TCA 72 bp | TTTCTTGAGATGTTATCCGGGCTCAAGTTACTCTCCTaGACCGGCTTCTCCACTAGCTGGACAACATGCCCA | + |
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Preference number: 3 (lower is better) Translates to: FLEMLSGLKLLS*TGFSTSWTTCP Trigger: TGGGCATGTTGTCCAGCTAGTGGAGAAGCCGGTTCAGGAGAGTAACTTGAGCCCGGATAACATCTCAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR TCA 72 bp | AAGCAGGGTGAGACATGGCTATCAAGTCAGAGTCCCTaGGGAACGCTGAGATCCTACACTTCCATATCTTCC | + |
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Preference number: 3 (lower is better) Translates to: KQGETWLSSQSP*GTLRSYTSISS Trigger: GGAAGATATGGAAGTGTAGGATCTCAGCGTTCCTCAGGGACTCTGACTTGATAGCCATGTCTCACCCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR TCA 72 bp | AGGGGAAATGAGCTACCAATGAAAGGCAAAGCAGGGTaGGACATGGCTATCAAGTCAGAGTCCCTGAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: RGNELPMKGKAG*DMAIKSESLRN Trigger: GTTCCTCAGGGACTCTGACTTGATAGCCATGTCTCACCCTGCTTTGCCTTTCATTGGTAGCTCATTTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR CAA 90 bp | AGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACACAATTGAGGTAACAGATTaGAAAGTCCACTTGCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: RGLAGLPEEPGSIPSKHTIEVTD*KVHLLL Trigger: TAAGAGCAAGTGGACTTTCAAATCTGTTACCTCAAT...TGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR CCA 72 bp | CCTTTCAGTCTCTGTGGGTGGTGCCAGGCATGTAACTaGTGTACATACATGTATGTAGAGAAAACAACCAGA | + |
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Preference number: 3 (lower is better) Translates to: PFSLCGWCQACN*CTYMYVEKTTR Trigger: TCTGGTTGTTTTCTCTACATACATGTATGTACACCAGTTACATGCCTGGCACCACCCACAGAGACTGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR GCA 72 bp | TTCTATCAGGCCACACCATATTCTAAAATTACCCATTaGGTAGGTTTGGCCACATTTCCAACACCACCTTCC | + |
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Preference number: 3 (lower is better) Translates to: FYQATPYSKITH*VGLATFPTPPS Trigger: GGAAGGTGGTGTTGGAAATGTGGCCAAACCTACGCAATGGGTAATTTTAGAATATGGTGTGGCCTGATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR CCA 72 bp | TTGGTCCCTAAACTTAGCATGCAAGGGAAAGTAGACTaGGGCTGGGACTTTACCTTAGCAATTATCCTGATT | + |
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Preference number: 3 (lower is better) Translates to: LVPKLSMQGKVD*GWDFTLAIILI Trigger: AATCAGGATAATTGCTAAGGTAAAGTCCCAGCCCCAGTCTACTTTCCCTTGCATGCTAAGTTTAGGGACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR CAA 90 bp | CTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGTTCCTTTCCTCTTTCTaGAGATGTTATCCGGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LALSISPWGSLSVHEKPLFLSSF*RCYPGS Trigger: TGAGCCCGGATAACATCTCAAGAAAGAGGAAAGGAA...CAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| 3UTR-3UTR CAA 90 bp | AGTCCACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGGATTTGAAAGTCCACTaGCTCTTAGTATTTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: SPLALSISPWGSLSVHEKDLKVH*LLVFLL Trigger: AAGGAGAAATACTAAGAGCAAGTGGACTTTCAAATC...CTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000150681.3 |
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| 3UTR-3UTR CAA 90 bp | AGTCCACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGATAACATCTTTGATATaGTCAACTCCTAGGATGCAC | + |
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Preference number: 3 (lower is better) Translates to: SPLALSISPWGSLSVHEKITSLI*STPRMH Trigger: GTGCATCCTAGGAGTTGACAATATCAAAGATGTTAT...CTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122835.8 ENSMUST00000150681.3 |
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| 3UTR TCA 72 bp | TCATATAGTACATCTCAAAGCACAAGAATTGTGCACTaGAATCCACATTTCCAGACTGCAAACACCCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: SYSTSQSTRIVH*NPHFQTANTQS Trigger: AGACTGGGTGTTTGCAGTCTGGAAATGTGGATTTCAGTGCACAATTCTTGTGCTTTGAGATGTACTATATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044466.12 ENSMUST00000122835.8 ENSMUST00000150681.3 |
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| 3UTR CCA 72 bp | AGATTTGAAAGTCCACTTGCTCTTAGTATTTCTCCTTaGGGGAGTTTATCTGTCCATGAAAAGCCTTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: RFESPLALSISP*GSLSVHEKPLT Trigger: AGTCAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACTTTCAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000150681.3 |
||
| 3UTR CCA 72 bp | GTCTTTCAGCTACAAAAGACACGAATGAGTAAACCTTaGAAAAGGGATAACATCTTTGATATTGTCAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: VFQLQKTRMSKP*KRDNIFDIVNS Trigger: GGAGTTGACAATATCAAAGATGTTATCCCTTTTCCAAGGTTTACTCATTCGTGTCTTTTGTAGCTGAAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122835.8 ENSMUST00000150681.3 |
||
| CDS-3UTR TCA 90 bp | TGGGGAGATGGTTCAGCAGTTAAGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGGGTACCGTTCCTCCCTaGGGCTACCTCCAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGDGSAVKRTGWSSRGARGTVPP*GYLQRA Trigger: AGCTCTTTGGAGGTAGCCTCAGGGAGGAACGGTACC...CCTGGCTCCTCTGGAAGACCAGCCAGTCCTCTTAACTGCTGAACCATCTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | CGAAGCCTCCATGGGGCACAGATCCAAACTTGCGAAGATCCAGGTACAGGGGAAGGTACCGTTCCTCCCTaGGGCTACCTCCAAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLHGAQIQTCEDPGTGEGTVPP*GYLQRA Trigger: AGCTCTTTGGAGGTAGCCTCAGGGAGGAACGGTACC...TTCCCCTGTACCTGGATCTTCGCAAGTTTGGATCTGTGCCCCATGGAGGCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150681.3 |
||
| CDS-3UTR TCA 90 bp | AGTCCACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGTCGCGTCCTGGACCCTaGGGGCGTCCCGCACGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLALSISPWGSLSVHEKSRPGP*GRPARA Trigger: TGCGCGTGCGGGACGCCCTCAGGGTCCAGGACGCGA...CTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | AGTGATACTATCAATGCTCCAGCAAGCTTACTTTCCCAGGACTCTCCTAATCAATCGCGTCCTGGACCCTaGGGGCGTCCCGCACGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDTINAPASLLSQDSPNQSRPGP*GRPARA Trigger: TGCGCGTGCGGGACGCCCTCAGGGTCCAGGACGCGA...TTGATTAGGAGAGTCCTGGGAAAGTAAGCTTGCTGGAGCATTGATAGTATCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| 3UTR CAA 72 bp | CCCATCCCGAAGCCTCCATGGGGCACAGATCCAAACTaGCGAAGATCCAGGTACAGGGGAATGGAAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PIPKPPWGTDPN*RRSRYRGMEAQ Trigger: TTGTGCTTCCATTCCCCTGTACCTGGATCTTCGCAAGTTTGGATCTGTGCCCCATGGAGGCTTCGGGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150681.3 |
||
| CDS-3UTR TCA 90 bp | GGGGAGATGGTTCAGCAGTTAAGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTTGGACTGACTTTTaGCCAGCTGCCCTTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GEMVQQLRGLAGLPEEPGSWTDF*PAALGL Trigger: AAGTCCAAGGGCAGCTGGTCAAAAGTCAGTCCAAGA...ACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCTTAACTGCTGAACCATCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| 3UTR CAA 72 bp | CAGGCCTGGTTGTGCCCAACTGAGGTCAAGGGCAGTTaGGTCTACTTAGAAAGTTCCAGGACAGTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAWLCPTEVKGS*VYLESSRTVRA Trigger: AGCCCTGACTGTCCTGGAACTTTCTAAGTAGACCAAACTGCCCTTGACCTCAGTTGGGCACAACCAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | AGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACACAAGGTGTCTCCGGCTCTaGGAATTCTCAGCTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RGLAGLPEEPGSIPSKHTRCLRL*EFSARN Trigger: ATTCCGAGCTGAGAATTCTCAGAGCCGGAGACACCT...TGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | AAGAACTCTCCAATCCCTCCATTGCCTCCCCTCACAGTGTCTATATATAGCCGACTTCCTTCTGGGATCTaGCGGACCGGATCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNSPIPPLPPLTVSIYSRLPSGI*RTGSIP Trigger: AGGGATGGATCCGGTCCGTCAGATCCCAGAAGGAAG...TCGGCTATATATAGACACTGTGAGGGGAGGCAATGGAGGGATTGGAGAGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR TCA 90 bp | GTGGTACCGTTCCTCCCTGAGGCTACCTCCAAAGAGCTCCCCAACTCCAGGAACACCTGCATGAGATCCTaGAGGCTTTCAACAAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVPFLPEATSKELPNSRNTCMRS*RLSTKE Trigger: TTCTTTTGTTGAAAGCCTTCAGGATCTCATGCAGGT...GTTCCTGGAGTTGGGGAGCTCTTTGGAGGTAGCCTCAGGGAGGAACGGTACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122835.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACACAAGCTGCCCTTGGACTTaGACAGAACTCCCAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLAGLPEEPGSIPSKHTSCPWT*TELPKV Trigger: GACTTTTGGGAGTTCTGTGCAAGTCCAAGGGCAGCT...TGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | ACTCTCCAATCCCTCCATTGCCTCCCCTCACAGTGTCTATATATAGCCGAGACATCTTGGACTGACTTTTaGCCAGCTGCCCTTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLQSLHCLPSQCLYIAETSWTDF*PAALGL Trigger: AAGTCCAAGGGCAGCTGGTCAAAAGTCAGTCCAAGA...TGTCTCGGCTATATATAGACACTGTGAGGGGAGGCAATGGAGGGATTGGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR TCA 90 bp | CAGAGGAGCCAGGTTCTATTCCCAGCAAACACACAGCAGCTCACAACCATCTCTGACATCACTTCTAGGTaGAGTTGTCCTGAGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRSQVLFPANTQQLTTISDITSR*SCPETV Trigger: AACTGTCTCAGGACAACTTCACCTAGAAGTGATGTC...AGAGATGGTTGTGAGCTGCTGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR CCA 90 bp | GTTAAGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACTCAGCTCGGAATGTTaGACCAAAGGTAAATACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKRTGWSSRGARFYSQQTLSSEC*TKGKYL Trigger: CAAGTATTTACCTTTGGTCCAACATTCCGAGCTGAG...TGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR CCA 90 bp | CAGAGGAGCCAGGTTCTATTCCCAGCAAACACACAGCAGCTCACAACCATCTCTGTAAAGGCGAAGTTCTaGGATGCTTGCTTTAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QRSQVLFPANTQQLTTISVKAKF*DACFKI Trigger: GATCTTAAAGCAAGCATCCCAGAACTTCGCCTTTAC...AGAGATGGTTGTGAGCTGCTGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTTCTACACATACTCATGTGTAGATGAGGTGATGGAGCACTTTCCATTACTTCCTTCTGGGATCTaGCGGACCGGATCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLFYTYSCVDEVMEHFPLLPSGI*RTGSIP Trigger: AGGGATGGATCCGGTCCGTCAGATCCCAGAAGGAAG...TAATGGAAAGTGCTCCATCACCTCATCTACACATGAGTATGTGTAGAAAAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR CCA 90 bp | AGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACACAATTAATGACAAAGACTaGTATGTTGCCACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLAGLPEEPGSIPSKHTINDKD*YVATVS Trigger: AGACACTGTGGCAACATACCAGTCTTTGTCATTAAT...TGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | AAGAACTCTCCAATCCCTCCATTGCCTCCCCTCACAGTGTCTATATATAGCCGAACCTGCATGAGATCCTaGAGGCTTTCAACAAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KNSPIPPLPPLTVSIYSRTCMRS*RLSTKE Trigger: TTCTTTTGTTGAAAGCCTTCAGGATCTCATGCAGGT...TCGGCTATATATAGACACTGTGAGGGGAGGCAATGGAGGGATTGGAGAGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR GCA 90 bp | AGTGATACTATCAATGCTCCAGCAAGCTTACTTTCCCAGGACTCTCCTAATCAAAGCTGCCCTTGGACTTaGACAGAACTCCCAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDTINAPASLLSQDSPNQSCPWT*TELPKV Trigger: GACTTTTGGGAGTTCTGTGCAAGTCCAAGGGCAGCT...TTGATTAGGAGAGTCCTGGGAAAGTAAGCTTGCTGGAGCATTGATAGTATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR CCA 90 bp | ATTTCCAGACTGCAAACACCCAGTCTTTTCTACACATACTCATGTGTAGATGAGATCCCGAAGCCTCCATaGGGCACAGATCCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISRLQTPSLFYTYSCVDEIPKPP*GTDPNL Trigger: CAAGTTTGGATCTGTGCCCCATGGAGGCTTCGGGAT...CTCATCTACACATGAGTATGTGTAGAAAAGACTGGGTGTTTGCAGTCTGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTCTTTCTTGAGATGTTATCCGGGCTCAAGTTACTCTCCTGAACCGGCTTCCCTTTATTTTGCTTaGAGGCTCCACTTGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSFLRCYPGSSYSPEPASLYFA*RLHLKK Trigger: CTTTTTCAAGTGGAGCCTTCAAGCAAAATAAAGGGA...AGCCGGTTCAGGAGAGTAACTTGAGCCCGGATAACATCTCAAGAAAGAGGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | TTTCTGCCTGATCATGCCAGTGATACTATCAATGCTCCAGCAAGCTTACTTTCCGACATCACTTCTAGGTaGAGTTGTCCTGAGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLPDHASDTINAPASLLSDITSR*SCPETV Trigger: AACTGTCTCAGGACAACTTCACCTAGAAGTGATGTC...GGAAAGTAAGCTTGCTGGAGCATTGATAGTATCACTGGCATGATCAGGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR CCA 90 bp | GCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGACTAACAAAACTTCCTTCTaGGATCTGACGGACCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ALSISPWGSLSVHEKPLTNKTSF*DLTDRI Trigger: GATCCGGTCCGTCAGATCCCAGAAGGAAGTTTTGTT...AGTCAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR CCA 90 bp | AGTGATACTATCAATGCTCCAGCAAGCTTACTTTCCCAGGACTCTCCTAATCAAAACAAAACTTCCTTCTaGGATCTGACGGACCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SDTINAPASLLSQDSPNQNKTSF*DLTDRI Trigger: GATCCGGTCCGTCAGATCCCAGAAGGAAGTTTTGTT...TTGATTAGGAGAGTCCTGGGAAAGTAAGCTTGCTGGAGCATTGATAGTATCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR TCA 90 bp | ATTAGAAACAGTGAAGAATCAGAGAACCAATACAGGCAGATAGAGAAGACAGATAGGTGTCTCCGGCTCTaGGAATTCTCAGCTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRNSEESENQYRQIEKTDRCLRL*EFSARN Trigger: ATTCCGAGCTGAGAATTCTCAGAGCCGGAGACACCT...ATCTGTCTTCTCTATCTGCCTGTATTGGTTCTCTGATTCTTCACTGTTTCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR TCA 90 bp | AGTCCACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGGAATCCGCAACAATCTaGAGGCTTTCCAAAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLALSISPWGSLSVHEKESATI*RLSKED Trigger: ATCTTCTTTGGAAAGCCTTCAGATTGTTGCGGATTC...CTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | TTTCTGCCTGATCATGCCAGTGATACTATCAATGCTCCAGCAAGCTTACTTTCCTCCCTTTATTTTGCTTaGAGGCTCCACTTGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPDHASDTINAPASLLSSLYFA*RLHLKK Trigger: CTTTTTCAAGTGGAGCCTTCAAGCAAAATAAAGGGA...GGAAAGTAAGCTTGCTGGAGCATTGATAGTATCACTGGCATGATCAGGCAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR TCA 90 bp | CCAGTCCTAATTGAGGTAACAGATTTGAAAGTCCACTTGCTCTTAGTATTTCTCGCAGCAACTGTATTCTaGGGACCATCTTCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVLIEVTDLKVHLLLVFLAATVF*GPSSFS Trigger: GGAGAATGAAGATGGTCCTCAGAATACAGTTGCTGC...GAGAAATACTAAGAGCAAGTGGACTTTCAAATCTGTTACCTCAATTAGGACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000150681.3 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTTTCAGCTACAAAAGACACGAATGAGTAAACCTTGGAAAAGGGATAACGCAGCAACTGTATTCTaGGGACCATCTTCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVFQLQKTRMSKPWKRDNAATVF*GPSSFS Trigger: GGAGAATGAAGATGGTCCTCAGAATACAGTTGCTGC...GTTATCCCTTTTCCAAGGTTTACTCATTCGTGTCTTTTGTAGCTGAAAGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150681.3 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCCTGATCATGCCAGTGATACTATCAATGCTCCAGCAAGCTTACTTTCCGATCCGTCATTTACATaGAGGAACAAAACTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPDHASDTINAPASLLSDPSFT*RNKTSF Trigger: GAAGGAAGTTTTGTTCCTGCATGTAAATGACGGATC...GGAAAGTAAGCTTGCTGGAGCATTGATAGTATCACTGGCATGATCAGGCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| 3UTR CAA 72 bp | GCCACACCATATTCTAAAATTACCCATTGCGTAGGTTaGGCCACATTTCCAACACCACCTTCCATTAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATPYSKITHCVG*ATFPTPPSIKD Trigger: ATCTTTAATGGAAGGTGGTGTTGGAAATGTGGCCAAACCTACGCAATGGGTAATTTTAGAATATGGTGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGCTTACTTTCCCAGGACTCTCCTAATCAATATTGAACTTGACATCAACGCAGCTATGAACTGGTaGCACAATTCAACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQAYFPRTLLINIELDINAAMNW*HNSTSS Trigger: TGAAGATGTTGAATTGTGTCACCAGTTCATAGCTGC...GTTGATGTCAAGTTCAATATTGATTAGGAGAGTCCTGGGAAAGTAAGCTTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGACTGATCCGTCATTTACATaGAGGAACAAAACTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALSISPWGSLSVHEKPLTDPSFT*RNKTSF Trigger: GAAGGAAGTTTTGTTCCTGCATGTAAATGACGGATC...AGTCAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTCCAAAGGTAAATACTTaGGTAAAAGCTCCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: HLLLVFLLGGVYLSMKSLPKVNT*VKAPDI Trigger: GATGTCAGGAGCTTTTACCCAAGTATTTACCTTTGG...AAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGCTTACTTTCCCAGGACTCTCCTAATCAATATTGAACTTGACATCAACGTAAAGGCGAAGTTCTaGGATGCTTGCTTTAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QQAYFPRTLLINIELDINVKAKF*DACFKI Trigger: GATCTTAAAGCAAGCATCCCAGAACTTCGCCTTTAC...GTTGATGTCAAGTTCAATATTGATTAGGAGAGTCCTGGGAAAGTAAGCTTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR TCA 90 bp | GAAAGTAGACTGGGGCTGGGACTTTACCTTAGCAATTATCCTGATTATAAAGATACCTGCATGAGATCCTaGAGGCTTTCAACAAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESRLGLGLYLSNYPDYKDTCMRS*RLSTKE Trigger: TTCTTTTGTTGAAAGCCTTCAGGATCTCATGCAGGT...ATCTTTATAATCAGGATAATTGCTAAGGTAAAGTCCCAGCCCCAGTCTACTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTTCTACACATACTCATGTGTAGATGAGGTGATGGAGCACTTTCCATTAGCAGCTATGAACTGGTaGCACAATTCAACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLFYTYSCVDEVMEHFPLAAMNW*HNSTSS Trigger: TGAAGATGTTGAATTGTGTCACCAGTTCATAGCTGC...TAATGGAAAGTGCTCCATCACCTCATCTACACATGAGTATGTGTAGAAAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000122835.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTCTTTCAGCTACAAAAGACACGAATGAGTAAACCTTGGAAAAGGGATAACGCAGCTATGAACTGGTaGCACAATTCAACATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVFQLQKTRMSKPWKRDNAAMNW*HNSTSS Trigger: TGAAGATGTTGAATTGTGTCACCAGTTCATAGCTGC...GTTATCCCTTTTCCAAGGTTTACTCATTCGTGTCTTTTGTAGCTGAAAGACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122835.8 |
||
| CDS-3UTR TCA 90 bp | AGTGATACTATCAATGCTCCAGCAAGCTTACTTTCCCAGGACTCTCCTAATCAAGAAGGGCTTGAGTTCTaGTGGATAATTAATGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDTINAPASLLSQDSPNQEGLEF*WIINDK Trigger: TTTGTCATTAATTATCCATCAGAACTCAAGCCCTTC...TTGATTAGGAGAGTCCTGGGAAAGTAAGCTTGCTGGAGCATTGATAGTATCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGCTTACTTTCCCAGGACTCTCCTAATCAATATTGAACTTGACATCAACCCAAAGGTAAATACTTaGGTAAAAGCTCCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: QQAYFPRTLLINIELDINPKVNT*VKAPDI Trigger: GATGTCAGGAGCTTTTACCCAAGTATTTACCTTTGG...GTTGATGTCAAGTTCAATATTGATTAGGAGAGTCCTGGGAAAGTAAGCTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGCTTACTTTCCCAGGACTCTCCTAATCAATATTGAACTTGACATCAACATTAATGACAAAGACTaGTATGTTGCCACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQAYFPRTLLINIELDININDKD*YVATVS Trigger: AGACACTGTGGCAACATACCAGTCTTTGTCATTAAT...GTTGATGTCAAGTTCAATATTGATTAGGAGAGTCCTGGGAAAGTAAGCTTGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
||
| CDS-3UTR TCA 90 bp | AGTCTTTTCTACACATACTCATGTGTAGATGAGGTGATGGAGCACTTTCCATTAGAAGGGCTTGAGTTCTaGTGGATAATTAATGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLFYTYSCVDEVMEHFPLEGLEF*WIINDK Trigger: TTTGTCATTAATTATCCATCAGAACTCAAGCCCTTC...TAATGGAAAGTGCTCCATCACCTCATCTACACATGAGTATGTGTAGAAAAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCTAATTGAGGTAACAGATTTGAAAGTCCACTTGCTCTTAGTATTTCTCCGAATGAGTAAACCTTaGAAAAGGGATAACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVLIEVTDLKVHLLLVFLRMSKP*KRDNIF Trigger: AAAGATGTTATCCCTTTTCCAAGGTTTACTCATTCG...GAGAAATACTAAGAGCAAGTGGACTTTCAAATCTGTTACCTCAATTAGGACTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
||
| CDS CCA 90 bp | GACCGGATCCATCCCTGCACCGTTACGCACTCCCCTCTCGCGTCCTaGACCCTGAGGGCGTCCCGCACGCGCATTTTGGCAGACGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DRIHPCTVTHSPLAS*TLRASRTRILADAR Trigger: CCGCGCGTCTGCCAAAATGCGCGTGCGGGACGCCCTCAGGGTCCAGGACGCGAGAGGGGAGTGCGTAACGGTGCAGGGATGGATCCGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
||
| CDS GCA 90 bp | AGGAACAAAACTTCCTTCTGGGATCTGACGGACCGGATCCATCCCTaGACCGTTACGCACTCCCCTCTCGCGTCCTGGACCCTGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RNKTSFWDLTDRIHP*TVTHSPLASWTLRA Trigger: CGCCCTCAGGGTCCAGGACGCGAGAGGGGAGTGCGTAACGGTGCAGGGATGGATCCGGTCCGTCAGATCCCAGAAGGAAGTTTTGTTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS-3UTR CAA 90 bp | GGGGAGATGGTTCAGCAGTTAAGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTGGCACAGATCCAAACTaGCGAAGATCCAGGTACCAC | + |
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Preference number: 5 (lower is better) Translates to: GEMVQQLRGLAGLPEEPGGTDPN*RRSRYH Trigger: GTGGTACCTGGATCTTCGCAAGTTTGGATCTGTGCC...ACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCTTAACTGCTGAACCATCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| CDS TCA 90 bp | AAGATCCGTCATTTACATGCAGGAACAAAACTTCCTTCTGGGATCTaGCGGACCGGATCCATCCCTGCACCGTTACGCACTCCCCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: KIRHLHAGTKLPSGI*RTGSIPAPLRTPLS Trigger: CGAGAGGGGAGTGCGTAACGGTGCAGGGATGGATCCGGTCCGTCAGATCCCAGAAGGAAGTTTTGTTCCTGCATGTAAATGACGGATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS TCA 90 bp | CGGACCCTCAATATAGAACCCAGAGCATTAGTCCTGCACCTCAGGTaGGGATACTGTCTCAGGTACTCCAGAGGGTGTCGCTCCTTATAC | + |
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Preference number: 5 (lower is better) Translates to: RTLNIEPRALVLHLR*GYCLRYSRGCRSLY Trigger: GTATAAGGAGCGACACCCTCTGGAGTACCTGAGACAGTATCCTCACCTGAGGTGCAGGACTAATGCTCTGGGTTCTATATTGAGGGTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS CCA 90 bp | TCCAAAGAAGATCCGTCATTTACATGCAGGAACAAAACTTCCTTCTaGGATCTGACGGACCGGATCCATCCCTGCACCGTTACGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: SKEDPSFTCRNKTSF*DLTDRIHPCTVTHS Trigger: GGAGTGCGTAACGGTGCAGGGATGGATCCGGTCCGTCAGATCCCAGAAGGAAGTTTTGTTCCTGCATGTAAATGACGGATCTTCTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS TCA 90 bp | AGCATATGTTCTAGTCTGCCCTTCTGGCCAGCAGCTATGAACTGGTaGCACAATTCAACATCTTCAGGACAGTGTGAGAGAACCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: SICSSLPFWPAAMNW*HNSTSSGQCERTIS Trigger: GGAGATGGTTCTCTCACACTGTCCTGAAGATGTTGAATTGTGTCACCAGTTCATAGCTGCTGGCCAGAAGGGCAGACTAGAACATATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS-3UTR CAA 90 bp | AGTCCACTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCAGCTGCCCTTGGACTaGCACAGAACTCCCAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: SPLALSISPWGSLSVHEKQLPLD*HRTPKS Trigger: ACTTTTGGGAGTTCTGTGCAAGTCCAAGGGCAGCTG...CTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAGTGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| CDS-3UTR CAA 90 bp | AGTGAAGAATCAGAGAACCAATACAGGCAGATAGAGAAGACAGATGAGGCCCTTACAAAGACTGGTATGTaGCCACAGTGTCTCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: SEESENQYRQIEKTDEALTKTGM*PQCLTR Trigger: CCTGGTGAGACACTGTGGCAACATACCAGTCTTTGT...AAGGGCCTCATCTGTCTTCTCTATCTGCCTGTATTGGTTCTCTGATTCTTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
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| CDS-3UTR CAA 90 bp | AGAGGACTGGCTGGTCTTCCAGAGGAGCCAGGTTCTATTCCCAGCAAACACACAATAACATCTTTGATATaGTCAACTCCTAGGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: RGLAGLPEEPGSIPSKHTITSLI*STPRMH Trigger: GTGCATCCTAGGAGTTGACAATATCAAAGATGTTAT...TGTGTGTTTGCTGGGAATAGAACCTGGCTCCTCTGGAAGACCAGCCAGTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| CDS TCA 90 bp | TTTTTAGCATATGTTCTAGTCTTCTGGCCAGCAGCTATGAACTGGTaGCACAATTCAACATCTTCAGGACAGTGTGAGAGAACCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: FLAYVLVFWPAAMNW*HNSTSSGQCERTIS Trigger: GGAGATGGTTCTCTCACACTGTCCTGAAGATGTTGAATTGTGTCACCAGTTCATAGCTGCTGGCCAGAAGACTAGAACATATGCTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122835.8 |
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| CDS-3UTR CAA 90 bp | ATTAGAAACAGTGAAGAATCAGAGAACCAATACAGGCAGATAGAGAAGACAGATCAGCTGCCCTTGGACTaGCACAGAACTCCCAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: IRNSEESENQYRQIEKTDQLPLD*HRTPKS Trigger: ACTTTTGGGAGTTCTGTGCAAGTCCAAGGGCAGCTG...ATCTGTCTTCTCTATCTGCCTGTATTGGTTCTCTGATTCTTCACTGTTTCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
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| CDS-3UTR CAA 90 bp | TTTCTGCCTGATCATGCCAGTGATACTATCAATGCTCCAGCAAGCTTACTTTCCCTTCAGTTCCACATTTaGCCTCTTGGACTGACTTTT | + |
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Preference number: 5 (lower is better) Translates to: FLPDHASDTINAPASLLSLQFHI*PLGLTF Trigger: AAAAGTCAGTCCAAGAGGCAAAATGTGGAACTGAAG...GGAAAGTAAGCTTGCTGGAGCATTGATAGTATCACTGGCATGATCAGGCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107159.3 |
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| CDS-3UTR CAA 90 bp | AGTCTTTTCTACACATACTCATGTGTAGATGAGGTGATGGAGCACTTTCCATTAACAAAGACTGGTATGTaGCCACAGTGTCTCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLFYTYSCVDEVMEHFPLTKTGM*PQCLTR Trigger: CCTGGTGAGACACTGTGGCAACATACCAGTCTTTGT...TAATGGAAAGTGCTCCATCACCTCATCTACACATGAGTATGTGTAGAAAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| CDS-3UTR CAA 90 bp | CTTGCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGCTTCAGTTCCACATTTaGCCTCTTGGACTGACTTTT | + |
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Preference number: 5 (lower is better) Translates to: LALSISPWGSLSVHEKPLLQFHI*PLGLTF Trigger: AAAAGTCAGTCCAAGAGGCAAAATGTGGAACTGAAG...CAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| CDS TCA 90 bp | CCAAAAGTCAATTCTCTACTGTCGAAGCTTGAATCCGCAACAATCTaGAGGCTTTCCAAAGAAGATCCGTCATTTACATGCAGGAACAAA | + |
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Preference number: 5 (lower is better) Translates to: PKVNSLLSKLESATI*RLSKEDPSFTCRNK Trigger: TTTGTTCCTGCATGTAAATGACGGATCTTCTTTGGAAAGCCTTCAGATTGTTGCGGATTCAAGCTTCGACAGTAGAGAATTGACTTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS-3UTR CAA 90 bp | AATCCACATTTCCAGACTGCAAACACCCAGTCTTTTCTACACATACTCATGTGTGTCCCTTTATTTTGCTaGAAGGCTCCACTTGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: NPHFQTANTQSFLHILMCVPLFC*KAPLEK Trigger: TTTTTCAAGTGGAGCCTTCAAGCAAAATAAAGGGAC...ACACATGAGTATGTGTAGAAAAGACTGGGTGTTTGCAGTCTGGAAATGTGGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| CDS-3UTR CAA 90 bp | GCTCTTAGTATTTCTCCTTGGGGGAGTTTATCTGTCCATGAAAAGCCTTTGACTAAAGGGATAACATCTTaGATATTGTCAACTCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: ALSISPWGSLSVHEKPLTKGITS*ILSTPR Trigger: CCTAGGAGTTGACAATATCAAAGATGTTATCCCTTT...AGTCAAAGGCTTTTCATGGACAGATAAACTCCCCCAAGGAGAAATACTAAGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044466.12 |
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| CDS CCA 72 bp | CGTCCCGCACGCGCATTTTGGCAGACGCGCGGGGCCTaGGGCAGGAAACGGAGGAACAGAGGCGCAGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: RPARAFWQTRGA*GRKRRNRGAAR Trigger: GCGCGCTGCGCCTCTGTTCCTCCGTTTCCTGCCCCAGGCCCCGCGCGTCTGCCAAAATGCGCGTGCGGGACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS CCA 72 bp | CATCCCTGCACCGTTACGCACTCCCCTCTCGCGTCCTaGACCCTGAGGGCGTCCCGCACGCGCATTTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: HPCTVTHSPLAS*TLRASRTRILA Trigger: TGCCAAAATGCGCGTGCGGGACGCCCTCAGGGTCCAGGACGCGAGAGGGGAGTGCGTAACGGTGCAGGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS GCA 72 bp | ACTTCCTTCTGGGATCTGACGGACCGGATCCATCCCTaGACCGTTACGCACTCCCCTCTCGCGTCCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: TSFWDLTDRIHP*TVTHSPLASWT Trigger: GGTCCAGGACGCGAGAGGGGAGTGCGTAACGGTGCAGGGATGGATCCGGTCCGTCAGATCCCAGAAGGAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS TCA 72 bp | CATTTACATGCAGGAACAAAACTTCCTTCTGGGATCTaGCGGACCGGATCCATCCCTGCACCGTTACGCACT | + |
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Preference number: 6 (lower is better) Translates to: HLHAGTKLPSGI*RTGSIPAPLRT Trigger: AGTGCGTAACGGTGCAGGGATGGATCCGGTCCGTCAGATCCCAGAAGGAAGTTTTGTTCCTGCATGTAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS TCA 72 bp | AATATAGAACCCAGAGCATTAGTCCTGCACCTCAGGTaGGGATACTGTCTCAGGTACTCCAGAGGGTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: NIEPRALVLHLR*GYCLRYSRGCR Trigger: GCGACACCCTCTGGAGTACCTGAGACAGTATCCTCACCTGAGGTGCAGGACTAATGCTCTGGGTTCTATATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS CCA 72 bp | GATCCGTCATTTACATGCAGGAACAAAACTTCCTTCTaGGATCTGACGGACCGGATCCATCCCTGCACCGTT | + |
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Preference number: 6 (lower is better) Translates to: DPSFTCRNKTSF*DLTDRIHPCTV Trigger: AACGGTGCAGGGATGGATCCGGTCCGTCAGATCCCAGAAGGAAGTTTTGTTCCTGCATGTAAATGACGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS CAA 90 bp | ACAGTCTCCAATAACCTCAATCTTTTCTGCCTTCAGTTCCACATTTaGCCTCTTGGACTGACTTTTGACCAGCTGCCCTTGGACTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: TVSNNLNLFCLQFHI*PLGLTFDQLPLDLH Trigger: GTGCAAGTCCAAGGGCAGCTGGTCAAAAGTCAGTCCAAGAGGCAAAATGTGGAACTGAAGGCAGAAAAGATTGAGGTTATTGGAGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS TCA 72 bp | GCCTTGAAGAGTTCCTCCATGACCTGCATGAGATCCTaGAGGCTTTCAACAAAAGAAATCTCCGCTTCAACC | + |
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Preference number: 6 (lower is better) Translates to: ALKSSSMTCMRS*RLSTKEISAST Trigger: GGTTGAAGCGGAGATTTCTTTTGTTGAAAGCCTTCAGGATCTCATGCAGGTCATGGAGGAACTCTTCAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 ENSMUST00000122835.8 |
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| CDS CCA 72 bp | AGATCAACACCCCACTTGGGTGTAAAGGCGAAGTTCTaGGATGCTTGCTTTAAGATCTCAATTGCCTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: RSTPHLGVKAKF*DACFKISIASV Trigger: TACGGAGGCAATTGAGATCTTAAAGCAAGCATCCCAGAACTTCGCCTTTACACCCAAGTGGGGTGTTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS GCA 72 bp | CTCCAGAGGGTGTCGCTCCTTATACTTTATAGGGAATaGCTTGGCTTCACAGTCTCCAATAACCTCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: LQRVSLLILYRE*LGFTVSNNLNL Trigger: AAGATTGAGGTTATTGGAGACTGTGAAGCCAAGGCATTCCCTATAAAGTATAAGGAGCGACACCCTCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS CAA 72 bp | TACTTCTCATGTTCCGTTTGTAGATCAACACCCCACTaGGGTGTAAAGGCGAAGTTCTGGGATGCTTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: YFSCSVCRSTPH*GVKAKFWDACF Trigger: AAAGCAAGCATCCCAGAACTTCGCCTTTACACCCAAGTGGGGTGTTGATCTACAAACGGAACATGAGAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS CAA 72 bp | AATAACCTCAATCTTTTCTGCCTTCAGTTCCACATTTaGCCTCTTGGACTGACTTTTGACCAGCTGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: NNLNLFCLQFHI*PLGLTFDQLPL Trigger: CAAGGGCAGCTGGTCAAAAGTCAGTCCAAGAGGCAAAATGTGGAACTGAAGGCAGAAAAGATTGAGGTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS CAA 72 bp | CAGAACTCCCAAAAGTCAATTCTCTACTGTCGAAGCTaGAATCCGCAACAATCTGAAGGCTTTCCAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: QNSQKSILYCRS*NPQQSEGFPKK Trigger: CTTCTTTGGAAAGCCTTCAGATTGTTGCGGATTCAAGCTTCGACAGTAGAGAATTGACTTTTGGGAGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS TCA 72 bp | AATTCTCTACTGTCGAAGCTTGAATCCGCAACAATCTaGAGGCTTTCCAAAGAAGATCCGTCATTTACATGC | + |
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Preference number: 6 (lower is better) Translates to: NSLLSKLESATI*RLSKEDPSFTC Trigger: GCATGTAAATGACGGATCTTCTTTGGAAAGCCTTCAGATTGTTGCGGATTCAAGCTTCGACAGTAGAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS TCA 72 bp | AGAACTCCCAAAAGTCAATTCTCTACTGTCGAAGCTTaGATCCGCAACAATCTGAAGGCTTTCCAAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RTPKSQFSTVEA*IRNNLKAFQRR Trigger: TCTTCTTTGGAAAGCCTTCAGATTGTTGCGGATTCAAGCTTCGACAGTAGAGAATTGACTTTTGGGAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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| CDS TCA 72 bp | AATACTTGGGTAAAAGCTCCTGACATCACTTCTAGGTaGAGTTGTCCTGAGACAGTTAAGAAAGCAGGAACA | + |
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Preference number: 6 (lower is better) Translates to: NTWVKAPDITSR*SCPETVKKAGT Trigger: TGTTCCTGCTTTCTTAACTGTCTCAGGACAACTTCACCTAGAAGTGATGTCAGGAGCTTTTACCCAAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044466.12 ENSMUST00000107159.3 |
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