Pregenerated sensors for NAPG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024581Ensembl transcript IDs: ENSMUST00000025474.14, ENSMUST00000150267.2, ENSMUST00000235372.2, ENSMUST00000236087.2, ENSMUST00000236925.2, ENSMUST00000237157.2, ENSMUST00000237864.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTCCTCTTCAGCAGCCATGCCGGCAGCACCATCAGGCTTGGCCTaGGGTGTCGCAGGGGACTTCTTCTTGATTCCTCCTCCTGGGACC | + |
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Preference number: 1 (lower is better) Translates to: SSSSAAMPAAPSGLA*GVAGDFFLIPPPGT Trigger: GGTCCCAGGAGGAGGAATCAAGAAGAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGCCGGCATGGCTGCTGAAGAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR GCA 90 bp | GGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCATaGTGGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: GPWLLCPGCRSPGTS*WLSRSAALPQAASA Trigger: TGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR CCA 90 bp | CCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCATGCTaGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTGCATCT | + |
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Preference number: 1 (lower is better) Translates to: PWLLCPGCRSPGTSC*LSRSAALPQAASAS Trigger: AGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR CCA 90 bp | CAGGAGCTGCTCCAGCGCCGCACAGTCCTCACTGCCGTTAAAGCCTaGTATGCTGTAGCTCTCCCTGACACACCTCTCTGCAGCCACATA | + |
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Preference number: 1 (lower is better) Translates to: QELLQRRTVLTAVKA*YAVALPDTPLCSHI Trigger: TATGTGGCTGCAGAGAGGTGTGTCAGGGAGAGCTACAGCATACCAGGCTTTAACGGCAGTGAGGACTGTGCGGCGCTGGAGCAGCTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR GCA 90 bp | GATTGTTCAGAGACACCCAGCCACTCAAGCCCACCTGGCAGAGGATaGCAATCTGTAGGAGCACTCCCACAACAAGGGGACCAGTACCGT | + |
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Preference number: 1 (lower is better) Translates to: DCSETPSHSSPPGRG*QSVGALPQQGDQYR Trigger: ACGGTACTGGTCCCCTTGTTGTGGGAGTGCTCCTACAGATTGGCATCCTCTGCCAGGTGGGCTTGAGTGGCTGGGTGTCTCTGAACAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR GCA 90 bp | GGGGTGCCGTTCTCCAGGTACATCATGCTGGCTTTCTCGATCAGCTaGACTGCCTCAGGCAGCTTCTGCATCTCCTTGGCAGCTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: GVPFSRYIMLAFSIS*TASGSFCISLAAYS Trigger: TGAATAAGCTGCCAAGGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGAACGGCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
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| 3UTR GCA 90 bp | ATCATGCTGGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTaGATCTCCTTGGCAGCTTATTCACTGTACCTCTGCAGCTGTCGG | + |
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Preference number: 1 (lower is better) Translates to: IMLAFSISCTASGSF*ISLAAYSLYLCSCR Trigger: CCGACAGCTGCAGAGGTACAGTGAATAAGCTGCCAAGGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
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| 3UTR GCA 90 bp | GCCGTTCTCCAGGTACATCATGCTGGCTTTCTCGATCAGCTGCACTaGCTCAGGCAGCTTCTGCATCTCCTTGGCAGCTTATTCACTGTA | + |
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Preference number: 1 (lower is better) Translates to: AVLQVHHAGFLDQLH*LRQLLHLLGSLFTV Trigger: TACAGTGAATAAGCTGCCAAGGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGAACGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
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| 3UTR GCA 90 bp | TTCTGCCTCTTCATGGTCCATGGTGCCAACAAGGCTCGGGTACAATaGAAGTGGACAGAGAGAATGGGAGGAGCTGACAGTGCCATTTCT | + |
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Preference number: 1 (lower is better) Translates to: FCLFMVHGANKARVQ*KWTERMGGADSAIS Trigger: AGAAATGGCACTGTCAGCTCCTCCCATTCTCTCTGTCCACTTGCATTGTACCCGAGCCTTGTTGGCACCATGGACCATGAAGAGGCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR CCA 90 bp | CTCTTCATGGTCCATGGTGCCAACAAGGCTCGGGTACAATGCAAGTaGACAGAGAGAATGGGAGGAGCTGACAGTGCCATTTCTAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LFMVHGANKARVQCK*TERMGGADSAISRS Trigger: TGACCTAGAAATGGCACTGTCAGCTCCTCCCATTCTCTCTGTCCACTTGCATTGTACCCGAGCCTTGTTGGCACCATGGACCATGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR GCA 90 bp | GAAAGCATAAACCTTGCATTAGTGTTTTGTGTCAGACCTGTAATCTaGACAGGGATTGTTCAGAGACACCCAGCCACTCAAGCCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: ESINLALVFCVRPVI*TGIVQRHPATQAHL Trigger: CAGGTGGGCTTGAGTGGCTGGGTGTCTCTGAACAATCCCTGTGCAGATTACAGGTCTGACACAAAACACTAATGCAAGGTTTATGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR TCA 90 bp | GGGCGCGAGAGCGCTGCTTGCTGTGAAGACCACGTTTTCCATTTCTaGCTAAGCTCACAAGAACGAAGACTTAATACAAGTAGAAAAATA | + |
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Preference number: 1 (lower is better) Translates to: GRESAACCEDHVFHF*LSSQERRLNTSRKI Trigger: TATTTTTCTACTTGTATTAAGTCTTCGTTCTTGTGAGCTTAGTCAGAAATGGAAAACGTGGTCTTCACAGCAAGCAGCGCTCTCGCGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR CCA 90 bp | ACCAAGCTCACTGTTGCTTCAGAGTGCGTTGAGAATTGCTGTTTATaGTGGATACAAGTAAAACCGACCCTCCACACGGTTTTATTGAAT | + |
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Preference number: 1 (lower is better) Translates to: TKLTVASECVENCCL*WIQVKPTLHTVLLN Trigger: ATTCAATAAAACCGTGTGGAGGGTCGGTTTTACTTGTATCCACCATAAACAGCAATTCTCAACGCACTCTGAAGCAACAGTGAGCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTTCCGGCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCTCGCTCCAGGGCCATaGCTGCTGTGTCCGGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: ELSGSLQGHGCCVRGAVLLAPGP*LLCPGC Trigger: GCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAG...GAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGCCGGAAAGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATGCTTTCTCGATCAGCTaGACTGCCTCAGGCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GSLQGHGCCVRGAVLQVHAFSIS*TASGSF Trigger: GAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGC...ATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR-3UTR GCA 90 bp | GCCATGCCGGCAGCACCATCAGGCTTGGCCTGGGGTGTCGCAGGGGACTTCTTCGCTTTCTCGATCAGCTaGACTGCCTCAGGCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: AMPAAPSGLAWGVAGDFFAFSIS*TASGSF Trigger: GAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGC...GAAGAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGCCGGCATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR CAA 90 bp | GCAGCACCATCAGGCTTGGCCTGGGGTGTCGCAGGGGACTTCTTCTaGATTCCTCCTCCTGGGACCACCAAGCTTAGGCCCAGCTTAGCG | + |
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Preference number: 2 (lower is better) Translates to: AAPSGLAWGVAGDFF*IPPPGTTKLRPSLA Trigger: CGCTAAGCTGGGCCTAAGCTTGGTGGTCCCAGGAGGAGGAATCAAGAAGAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR CAA 90 bp | TCGTCTTCCTCCTCTTCAGCAGCCATGCCGGCAGCACCATCAGGCTaGGCCTGGGGTGTCGCAGGGGACTTCTTCTTGATTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSSSSSAAMPAAPSG*AWGVAGDFFLIPPP Trigger: AGGAGGAGGAATCAAGAAGAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGCCGGCATGGCTGCTGAAGAGGAGGAAGACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCAGGAGCTGCTCCAGCGCCGCACAGTCCTCACTGCCGTTAAAGCCTGGTGGTCTACATTCTCTATaGGCTTTCCGGCTCGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PSRSCSSAAQSSLPLKPGGLHSL*AFRLAP Trigger: TGGAGCGAGCCGGAAAGCTCATAGAGAATGTAGACC...ACCAGGCTTTAACGGCAGTGAGGACTGTGCGGCGCTGGAGCAGCTCCTGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTATGAGCTTTCCGGCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCTATTCACTGTACCTCTaGAGCTGTCGGACACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LYELSGSLQGHGCCVRGAYSLYL*SCRTQC Trigger: GCACTGTGTCCGACAGCTGCAGAGGTACAGTGAATA...GGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGCCGGAAAGCTCATAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
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| 3UTR-3UTR GCA 90 bp | GCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCATGCTGGCTTTCCTCGATCAGCTGCACTaGCTCAGGCAGCTTCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: AMAAVSGVPFSRYIMLAFLDQLH*LRQLLH Trigger: ATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAG...GAAAGCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR-3UTR GCA 90 bp | GCCATGCCGGCAGCACCATCAGGCTTGGCCTGGGGTGTCGCAGGGGACTTCTTCTCTCCAGGTACATCATaGTGGCTTTCTCGATCAGCT | + |
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Preference number: 2 (lower is better) Translates to: AMPAAPSGLAWGVAGDFFSPGTS*WLSRSA Trigger: AGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGA...GAAGAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGCCGGCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR-3UTR GCA 90 bp | TGCACGCTGGCTCCTGATGGGGGTGGCGGGAGGCGGGCACTGCCTAAATACTCTAAGGCTCGGGTACAATaGAAGTGGACAGAGAGAATG | + |
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Preference number: 2 (lower is better) Translates to: CTLAPDGGGGRRALPKYSKARVQ*KWTERM Trigger: CATTCTCTCTGTCCACTTGCATTGTACCCGAGCCTT...AGAGTATTTAGGCAGTGCCCGCCTCCCGCCACCCCCATCAGGAGCCAGCGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR-3UTR TCA 90 bp | TGCACGCTGGCTCCTGATGGGGGTGGCGGGAGGCGGGCACTGCCTAAATACTCTTGCTTCAGAGTGCGTTaGGAATTGCTGTTTATGGTG | + |
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Preference number: 2 (lower is better) Translates to: CTLAPDGGGGRRALPKYSCFRVR*ELLFMV Trigger: CACCATAAACAGCAATTCTCAACGCACTCTGAAGCA...AGAGTATTTAGGCAGTGCCCGCCTCCCGCCACCCCCATCAGGAGCCAGCGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR-3UTR CCA 90 bp | GGGATTGTTCAGAGACACCCAGCCACTCAAGCCCACCTGGCAGAGGATGCCAATCAACCACGCTCCCACTaGCTCTGTGACCATCAATGG | + |
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Preference number: 2 (lower is better) Translates to: GIVQRHPATQAHLAEDANQPRSH*LCDHQW Trigger: CCATTGATGGTCACAGAGCCAGTGGGAGCGTGGTTG...ATTGGCATCCTCTGCCAGGTGGGCTTGAGTGGCTGGGTGTCTCTGAACAATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR-3UTR CCA 90 bp | TGCACGCTGGCTCCTGATGGGGGTGGCGGGAGGCGGGCACTGCCTAAATACTCTAGCATGCTTTATTCATaGTGGAGTGTGGTGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: CTLAPDGGGGRRALPKYSSMLYS*WSVVTV Trigger: GACTGTCACCACACTCCACCATGAATAAAGCATGCT...AGAGTATTTAGGCAGTGCCCGCCTCCCGCCACCCCCATCAGGAGCCAGCGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR CAA 90 bp | GCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTGCATCTCCTaGGCAGCTTATTCACTGTACCTCTGCAGCTGTCGGACACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: AFSISCTASGSFCIS*AAYSLYLCSCRTQC Trigger: GCACTGTGTCCGACAGCTGCAGAGGTACAGTGAATAAGCTGCCAAGGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
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| 3UTR-3UTR TCA 90 bp | CATCAAACCTCCGCCCTCGTACCAGCAGTCTGGAGGCCTTTCCTAGGAGTTCAAACATTGGCAGTCTGCTaGTACAGCTGTACAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: HQTSALVPAVWRPFLGVQTLAVC*YSCTAF Trigger: GAAGGCTGTACAGCTGTATCAGCAGACTGCCAATGT...TTGAACTCCTAGGAAAGGCCTCCAGACTGCTGGTACGAGGGCGGAGGTTTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAACTGCCTGTCGGAGGCGCTCCTCATTTTCAAAAACATTGGCAGTCTGCTGCCAGGTACATCATGCTaGCTTTCTCGATCAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: FNCLSEALLIFKNIGSLLPGTSC*LSRSAA Trigger: TGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGG...CAGCAGACTGCCAATGTTTTTGAAAATGAGGAGCGCCTCCGACAGGCAGTTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAACTCGATCAGCTGCACTaGCTCAGGCAGCTTCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: RQDFSEADAHKMSPNSTKLDQLH*LRQLLH Trigger: ATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAG...TTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR-3UTR CCA 90 bp | CATCAAACCTCCGCCCTCGTACCAGCAGTCTGGAGGCCTTTCCTAGGAGTTCAAAGTAGATACAATGGCTaGTTTGGGGAAATGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: HQTSALVPAVWRPFLGVQSRYNG*FGEMKL Trigger: AAGTTTCATTTCCCCAAACCAGCCATTGTATCTACT...TTGAACTCCTAGGAAAGGCCTCCAGACTGCTGGTACGAGGGCGGAGGTTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR-3UTR TCA 90 bp | AATACTCTGCTGTTTAAAACCAAGCTCACTGTTGCTTCAGAGTGCGTTGAGAATCATGGTGGAGTGTGGTaGCAGTCCTATTCCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: NTLLFKTKLTVASECVENHGGVW*QSYSIQ Trigger: CTGAATGGAATAGGACTGTCACCACACTCCACCATG...ATTCTCAACGCACTCTGAAGCAACAGTGAGCTTGGTTTTAAACAGCAGAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR-3UTR CCA 90 bp | AATCTCAATGTAATTAAAGAGAATAAGCTGGTGACCAAAAGACCGGTGCAGGTACGGGTACAATGCAAGTaGACAGAGAGAATGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: NLNVIKENKLVTKRPVQVRVQCK*TERMGG Trigger: TCCTCCCATTCTCTCTGTCCACTTGCATTGTACCCG...TACCTGCACCGGTCTTTTGGTCACCAGCTTATTCTCTTTAATTACATTGAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR-3UTR TCA 90 bp | AATACTCTGCTGTTTAAAACCAAGCTCACTGTTGCTTCAGAGTGCGTTGAGAATACGTCAGGATTTCAGTaGAGCAGATGCCCACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: NTLLFKTKLTVASECVENTSGFQ*SRCPQN Trigger: ATTTTGTGGGCATCTGCTTCACTGAAATCCTGACGT...ATTCTCAACGCACTCTGAAGCAACAGTGAGCTTGGTTTTAAACAGCAGAGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR-3UTR GCA 90 bp | CCACATAGTCATTTCTGTGTAGATGAACTAAGACCTGAGCAATTGTTTTCTTATTTTCTGAATAGACAGTaGAGCTTCATCAAACCTCCG | + |
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Preference number: 2 (lower is better) Translates to: PHSHFCVDELRPEQLFSYFLNRQ*SFIKPP Trigger: CGGAGGTTTGATGAAGCTGCACTGTCTATTCAGAAA...ATAAGAAAACAATTGCTCAGGTCTTAGTTCATCTACACAGAAATGACTATGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR-3UTR CCA 90 bp | AAATATGACAGTGTTTTCTGCTTGCAATGGAAAGGAAAAACTGCTTCACAGGTAATACAATGGCTGGTTTaGGGAAATGAAACTTCATAT | + |
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Preference number: 2 (lower is better) Translates to: KYDSVFCLQWKGKTASQVIQWLV*GNETSY Trigger: ATATGAAGTTTCATTTCCCCAAACCAGCCATTGTAT...TACCTGTGAAGCAGTTTTTCCTTTCCATTGCAAGCAGAAAACACTGTCATATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 ENSMUST00000237157.2 |
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| 3UTR CCA 72 bp | TCAGCAGCCATGCCGGCAGCACCATCAGGCTTGGCCTaGGGTGTCGCAGGGGACTTCTTCTTGATTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SAAMPAAPSGLA*GVAGDFFLIPP Trigger: AGGAGGAATCAAGAAGAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGCCGGCATGGCTGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR GCA 72 bp | CTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCATaGTGGCTTTCTCGATCAGCTGCACTGCCTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: LLCPGCRSPGTS*WLSRSAALPQA Trigger: TGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR CCA 72 bp | CTGTGTCCGGGGTGCCGTTCTCCAGGTACATCATGCTaGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: LCPGCRSPGTSC*LSRSAALPQAA Trigger: AGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
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| 3UTR CCA 72 bp | CTCCAGCGCCGCACAGTCCTCACTGCCGTTAAAGCCTaGTATGCTGTAGCTCTCCCTGACACACCTCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LQRRTVLTAVKA*YAVALPDTPLC Trigger: GCAGAGAGGTGTGTCAGGGAGAGCTACAGCATACCAGGCTTTAACGGCAGTGAGGACTGTGCGGCGCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
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| 3UTR-3UTR CAA 90 bp | TGCACGCTGGCTCCTGATGGGGGTGGCGGGAGGCGGGCACTGCCTAAATACTCTCTCCACACGGTTTTATaGAATAACCTGGGCCATAAC | + |
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Preference number: 3 (lower is better) Translates to: CTLAPDGGGGRRALPKYSLHTVL*NNLGHN Trigger: GTTATGGCCCAGGTTATTCAATAAAACCGTGTGGAG...AGAGTATTTAGGCAGTGCCCGCCTCCCGCCACCCCCATCAGGAGCCAGCGTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR GCA 72 bp | CTAATGAAGAGTCTGGAGGAGTGTCCGCTGAGGACCTaGTGTCTGCCTCTCTCTTTGGAACTGCTGACACTC | + |
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Preference number: 3 (lower is better) Translates to: LMKSLEECPLRT*CLPLSLELLTL Trigger: GAGTGTCAGCAGTTCCAAAGAGAGAGGCAGACAGCAGGTCCTCAGCGGACACTCCTCCAGACTCTTCATTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR GCA 72 bp | TTCTCCAGGTACATCATGCTGGCTTTCTCGATCAGCTaGACTGCCTCAGGCAGCTTCTGCATCTCCTTCAGC | + |
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Preference number: 3 (lower is better) Translates to: FSRYIMLAFSIS*TASGSFCISFS Trigger: GCTGAAGGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTTCATCAAACCTCCGCCCTCGTACCAGCAGTCTGGAGGCCTTTCCTAGGAAGCTTCTGCATCTCCTaGGCAGCTTATTCACTGTAC | + |
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Preference number: 3 (lower is better) Translates to: QLHQTSALVPAVWRPFLGSFCIS*AAYSLY Trigger: GTACAGTGAATAAGCTGCCAAGGAGATGCAGAAGCT...TCCTAGGAAAGGCCTCCAGACTGCTGGTACGAGGGCGGAGGTTTGATGAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
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| 3UTR GCA 72 bp | TTCATGGTCCATGGTGCCAACAAGGCTCGGGTACAATaGAAGTGGACAGAGAGAATGGGAGGAGCTGACAGT | + |
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Preference number: 3 (lower is better) Translates to: FMVHGANKARVQ*KWTERMGGADS Trigger: ACTGTCAGCTCCTCCCATTCTCTCTGTCCACTTGCATTGTACCCGAGCCTTGTTGGCACCATGGACCATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| 3UTR CCA 72 bp | TACTGCTTGCAACCTCGTCAGTTCACGAAGCATGAATaGGCCTTAGCCATACAGGGTAAAAAGAGGAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: YCLQPRQFTKHE*ALAIQGKKRNA Trigger: AGCATTCCTCTTTTTACCCTGTATGGCTAAGGCCCATTCATGCTTCGTGAACTGACGAGGTTGCAAGCAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR GCA 72 bp | AACCTTGCATTAGTGTTTTGTGTCAGACCTGTAATCTaGACAGGGATTGTTCAGAGACACCCAGCCACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NLALVFCVRPVI*TGIVQRHPATQ Trigger: TTGAGTGGCTGGGTGTCTCTGAACAATCCCTGTGCAGATTACAGGTCTGACACAAAACACTAATGCAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR CCA 72 bp | GTTGCTTCAGAGTGCGTTGAGAATTGCTGTTTATGGTaGATACAAGTAAAACCGACCCTCCACACGGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VASECVENCCLW*IQVKPTLHTVL Trigger: TAAAACCGTGTGGAGGGTCGGTTTTACTTGTATCCACCATAAACAGCAATTCTCAACGCACTCTGAAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR TCA 72 bp | AGCGCTGCTTGCTGTGAAGACCACGTTTTCCATTTCTaGCTAAGCTCACAAGAACGAAGACTTAATACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAACCEDHVFHF*LSSQERRLNTS Trigger: ACTTGTATTAAGTCTTCGTTCTTGTGAGCTTAGTCAGAAATGGAAAACGTGGTCTTCACAGCAAGCAGCGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR GCA 72 bp | CTCCAAACCAAAATTACTTTGGAGGTAAGAAATGCATaGACACTAGATTGGCAGGAACGTCACCTGTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LQTKITLEVRNA*TLDWQERHLSF Trigger: GAATGACAGGTGACGTTCCTGCCAATCTAGTGTGCATGCATTTCTTACCTCCAAAGTAATTTTGGTTTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGGCTGAAGACATTTACAACAGCACTTTAATATGCTACCTTCCATATTTTTGTCTGCCTCTCTCTTaGGAACTGCTGACACTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GRAEDIYNSTLICYLPYFCLPLS*ELLTLL Trigger: TAAGAGTGTCAGCAGTTCCAAAGAGAGAGGCAGACA...AAAATATGGAAGGTAGCATATTAAAGTGCTGTTGTAAATGTCTTCAGCCCTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGGCTGAAGACATTTACAACAGCACTTTAATATGCTACCTTCCATATTTTCAAGGCCCCACTCCATaGAAGTATGTTGTTTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRAEDIYNSTLICYLPYFQGPTP*KYVVYS Trigger: AGAATAAACAACATACTTCAATGGAGTGGGGCCTTG...AAAATATGGAAGGTAGCATATTAAAGTGCTGTTGTAAATGTCTTCAGCCCTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR-3UTR CAA 90 bp | AATCTCAATGTAATTAAAGAGAATAAGCTGGTGACCAAAAGACCGGTGCAGGTACCTTGCATTAGTGTTTaGTGTCAGACCTGTAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: NLNVIKENKLVTKRPVQVPCISV*CQTCNL Trigger: CAGATTACAGGTCTGACACAAAACACTAATGCAAGG...TACCTGCACCGGTCTTTTGGTCACCAGCTTATTCTCTTTAATTACATTGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR-3UTR CAA 90 bp | AATCTCAATGTAATTAAAGAGAATAAGCTGGTGACCAAAAGACCGGTGCAGGTAGACAGTGTTTTCTGCTaGCAATGGAAAGGAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: NLNVIKENKLVTKRPVQVDSVFC*QWKGKT Trigger: AGTTTTTCCTTTCCATTGCAAGCAGAAAACACTGTC...TACCTGCACCGGTCTTTTGGTCACCAGCTTATTCTCTTTAATTACATTGAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR GCA 90 bp | TTCCGGCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTTCTGCCTTGGCCAGATaGTCCAGCCCCTCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FRLAPGPWLLCPGCRSPGSALAR*SSPSLI Trigger: GATCAACGAGGGGCTGGAGCATCTGGCCAAGGCAGA...ACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGCCGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CCA 90 bp | TGCACGCTGGCTCCTGATGGGGGTGGCGGGAGGCGGGCACTGCCTAAATACTCTCCATCAGGCTTGGCCTaGGGTGTCGCAGGGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTLAPDGGGGRRALPKYSPSGLA*GVAGDF Trigger: GAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGG...AGAGTATTTAGGCAGTGCCCGCCTCCCGCCACCCCCATCAGGAGCCAGCGTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR GCA 90 bp | GCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCTCTGCCTTGGCCAGATaGTCCAGCCCCTCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: ARSRAMAAVSGVPFSRYISALAR*SSPSLI Trigger: GATCAACGAGGGGCTGGAGCATCTGGCCAAGGCAGA...GATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CCA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCCTCGCTCCAGGGCCATaGCTGCTGTGTCCGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HENGVSGFPSPHLLISSGLAPGP*LLCPGC Trigger: GCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAG...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTTTCCGGCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCTTTCAGGTACTTCTCTaGCTTGGCCAGATGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELSGSLQGHGCCVRGAVLFQVLL*LGQMLQ Trigger: CTGGAGCATCTGGCCAAGGCAGAGAAGTACCTGAAA...GAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGCCGGAAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
||
| CDS-3UTR GCA 90 bp | CCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCTCCAGGGCCATGGCTaGTGTGTCCGGGGTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRKRRVRIPVSSSPHLLRLQGHG*CVRGAV Trigger: AACGGCACCCCGGACACAGCAGCCATGGCCCTGGAG...CCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR CCA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGCTCGCTCCAGGGCCATaGCTGCTGTGTCCGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: STKTACQDSRLLISSSPQLAPGP*LLCPGC Trigger: GCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAG...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| 3UTR CAA 72 bp | TCAGGCTTGGCCTGGGGTGTCGCAGGGGACTTCTTCTaGATTCCTCCTCCTGGGACCACCAAGCTTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGLAWGVAGDFF*IPPPGTTKLRP Trigger: GGGCCTAAGCTTGGTGGTCCCAGGAGGAGGAATCAAGAAGAAGTCCCCTGCGACACCCCAGGCCAAGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGGCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTGAGGCAGGCATCCTTTaGTTGCTCAAATTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLAPGPWLLCPGCRSPGEAGIL*LLKLFG Trigger: GCCAAACAATTTGAGCAAGCAAAGGATGCCTGCCTC...ACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGCCGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CCA 90 bp | CCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCCATCAGGCTTGGCCTaGGGTGTCGCAGGGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRKRRVRIPVSSSPHLLRPSGLA*GVAGDF Trigger: GAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGG...CCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR CCA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGCCATCAGGCTTGGCCTaGGGTGTCGCAGGGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: STKTACQDSRLLISSSPQPSGLA*GVAGDF Trigger: GAAGTCCCCTGCGACACCCCAGGCCAAGCCTGATGG...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCTGCTGTAGCTCTCCCTaGCACACCTCTCTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HENGVSGFPSPHLLISSGCCSSP*HTSLQP Trigger: TGGCTGCAGAGAGGTGTGTCAGGGAGAGCTACAGCA...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | GCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCCAGCATGAAAAAGACTaGATGGACATGAGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARSRAMAAVSGVPFSRYIQHEKD*MDMSPV Trigger: AACAGGGCTCATGTCCATTCAGTCTTTTTCATGCTG...GATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTGCATCTCCTTCAGCGGTACTTCTCTGCCTTaGCCAGATGCTCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAFSISCTASGSFCISFSGTSLP*PDAPAP Trigger: AGGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACC...GCTGAAGGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 |
||
| CDS-3UTR TCA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGTGCTGTAGCTCTCCCTaGCACACCTCTCTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STKTACQDSRLLISSSPQCCSSP*HTSLQP Trigger: TGGCTGCAGAGAGGTGTGTCAGGGAGAGCTACAGCA...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | CCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCAGGGGACTTCTTCTTaGTTCCTCCTCCTGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PRKRRVRIPVSSSPHLLRQGTSS*FLLLGP Trigger: TGGTCCCAGGAGGAGGAATCAAGAAGAAGTCCCCTG...CCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | CCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCTCGATCAGCTGCACTaGCTCAGGCAGCTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRKRRVRIPVSSSPHLLRLDQLH*LRQLLH Trigger: ATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAG...CCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCGCTTTCTCGATCAGCTaGACTGCCTCAGGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HENGVSGFPSPHLLISSGAFSIS*TASGSF Trigger: GAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGC...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCGGTCTACATTCTCTATaGGCTTTCCGGCTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HENGVSGFPSPHLLISSGGLHSL*AFRLAP Trigger: TGGAGCGAGCCGGAAAGCTCATAGAGAATGTAGACC...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCATGCTGGCAAGACTGAATGGACATaGGCCCTGTTATTTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QGHGCCVRGAVLQVHHAGKTEWT*ALLFSW Trigger: CCATGAAAATAACAGGGCTCATGTCCATTCAGTCTT...GCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR GCA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGCTCGATCAGCTGCACTaGCTCAGGCAGCTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: STKTACQDSRLLISSSPQLDQLH*LRQLLH Trigger: ATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAG...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR CCA 90 bp | GTACATCATGCTGGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTGCATGGTACTTCTCTGCCTTaGCCAGATGCTCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VHHAGFLDQLHCLRQLLHGTSLP*PDAPAP Trigger: AGGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACC...ATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CCA 90 bp | GATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGCTCGCTCCAGGGCCATaGCTGCTGTGTCCGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DFSEADAHKMSPNSTKTALAPGP*LLCPGC Trigger: GCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAG...CGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| 3UTR CAA 72 bp | ATCAGCTGCACTGCCTCAGGCAGCTTCTGCATCTCCTaGGCAGCTTATTCACTGTACCTCTGCAGCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCTASGSFCIS*AAYSLYLCSCR Trigger: CCGACAGCTGCAGAGGTACAGTGAATAAGCTGCCAAGGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
||
| CDS-3UTR TCA 90 bp | GGGATTGTTCAGAGACACCCAGCCACTCAAGCCCACCTGGCAGAGGATGCCAATACATTGGCAGTCTGCTaGTACAGCTGTACAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIVQRHPATQAHLAEDANTLAVC*YSCTAF Trigger: GAAGGCTGTACAGCTGTATCAGCAGACTGCCAATGT...ATTGGCATCCTCTGCCAGGTGGGCTTGAGTGGCTGGGTGTCTCTGAACAATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR TCA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCACATTGGCAGTCTGCTaGTACAGCTGTACAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HENGVSGFPSPHLLISSGTLAVC*YSCTAF Trigger: GAAGGCTGTACAGCTGTATCAGCAGACTGCCAATGT...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | TGCACGCTGGCTCCTGATGGGGGTGGCGGGAGGCGGGCACTGCCTAAATACTCTCAGGCATCCTTTGCTTaGTCAAATTGTTTGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: CTLAPDGGGGRRALPKYSQASFA*SNCLAF Trigger: AAATGCCAAACAATTTGAGCAAGCAAAGGATGCCTG...AGAGTATTTAGGCAGTGCCCGCCTCCCGCCACCCCCATCAGGAGCCAGCGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR GCA 90 bp | TATGAGCTTTCCGGCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCAGGCATCCTTTGCTTaGTCAAATTGTTTGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YELSGSLQGHGCCVRGAVQASFA*SNCLAF Trigger: AAATGCCAAACAATTTGAGCAAGCAAAGGATGCCTG...AACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGCCGGAAAGCTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CCA 90 bp | CCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCCAGGTACATCATGCTaGCTTTCTCGATCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRKRRVRIPVSSSPHLLRPGTSC*LSRSAA Trigger: TGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGG...CCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | TGCACGCTGGCTCCTGATGGGGGTGGCGGGAGGCGGGCACTGCCTAAATACTCTTTTAAAAGCAACAGCTaGTTTCCCATATTCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTLAPDGGGGRRALPKYSFKSNS*FPIFRS Trigger: GCTTCTGAATATGGGAAAGCAGCTGTTGCTTTTAAA...AGAGTATTTAGGCAGTGCCCGCCTCCCGCCACCCCCATCAGGAGCCAGCGTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR GCA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCTCTCCAGGTACATCATaGTGGCTTTCTCGATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HENGVSGFPSPHLLISSGSPGTS*WLSRSA Trigger: AGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGA...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | CGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAACTCCAGGGCCATGGCTaGTGTGTCCGGGGTGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQDFSEADAHKMSPNSTKLQGHG*CVRGAV Trigger: AACGGCACCCCGGACACAGCAGCCATGGCCCTGGAG...TTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGCCTGACACACCTCTCTaGAGCCACATAGTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STKTACQDSRLLISSSPQPDTPL*SHIVIS Trigger: AGAAATGACTATGTGGCTGCAGAGAGGTGTGTCAGG...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCTGGAGGAGTGTCCGCTGAGGACCTGCTGTCTGCCTCTCTCTTTGGAACATTGTCCATGTATTTaGAAAGGGGCGAGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLEECPLRTCCLPLSLEHCPCI*KGASCR Trigger: TCTGCAACTCGCCCCTTTTCAAATACATGGACAATG...TTCCAAAGAGAGAGGCAGACAGCAGGTCCTCAGCGGACACTCCTCCAGACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR TCA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGCATTGTCCATGTATTTaGAAAGGGGCGAGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STKTACQDSRLLISSSPQHCPCI*KGASCR Trigger: TCTGCAACTCGCCCCTTTTCAAATACATGGACAATG...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | ACATCATGCTGGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTGCATCTGAGGCAGGCATCCTTTaGTTGCTCAAATTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSCWLSRSAALPQAASASEAGIL*LLKLFG Trigger: GCCAAACAATTTGAGCAAGCAAAGGATGCCTGCCTC...AGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGCTCGATCAGCTGCACTaGCTCAGGCAGCTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEADAHKMSPNSTKTACQLDQLH*LRQLLH Trigger: ATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAG...CTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCTTTCTGAATAGACAGTaGAGCTTCATCAAACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HENGVSGFPSPHLLISSGFLNRQ*SFIKPP Trigger: CGGAGGTTTGATGAAGCTGCACTGTCTATTCAGAAA...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGGGTCTACATTCTCTATaGGCTTTCCGGCTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEADAHKMSPNSTKTACQGLHSL*AFRLAP Trigger: TGGAGCGAGCCGGAAAGCTCATAGAGAATGTAGACC...CTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | CATCAAACCTCCGCCCTCGTACCAGCAGTCTGGAGGCCTTTCCTAGGAGTTCAAAAGACTGAATGGACATaGGCCCTGTTATTTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HQTSALVPAVWRPFLGVQKTEWT*ALLFSW Trigger: CCATGAAAATAACAGGGCTCATGTCCATTCAGTCTT...TTGAACTCCTAGGAAAGGCCTCCAGACTGCTGGTACGAGGGCGGAGGTTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
||
| CDS-3UTR GCA 90 bp | GATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGGCTTTCTCGATCAGCTaGACTGCCTCAGGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DFSEADAHKMSPNSTKTAAFSIS*TASGSF Trigger: GAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGC...CGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGTTTCTGAATAGACAGTaGAGCTTCATCAAACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: STKTACQDSRLLISSSPQFLNRQ*SFIKPP Trigger: CGGAGGTTTGATGAAGCTGCACTGTCTATTCAGAAA...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGCTTGCTCATAAGCTCTaGTTTCCCATATTCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STKTACQDSRLLISSSPQLAHKL*FPIFRS Trigger: GCTTCTGAATATGGGAAAGCAGAGCTTATGAGCAAG...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
||
| CDS-3UTR TCA 90 bp | CGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAACAGGGGACTTCTTCTTaGTTCCTCCTCCTGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RQDFSEADAHKMSPNSTKQGTSS*FLLLGP Trigger: TGGTCCCAGGAGGAGGAATCAAGAAGAAGTCCCCTG...TTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | CAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGCAGGGGACTTCTTCTTaGTTCCTCCTCCTGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QDFSEADAHKMSPNSTKTQGTSS*FLLLGP Trigger: TGGTCCCAGGAGGAGGAATCAAGAAGAAGTCCCCTG...CGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGTTTCAGGTACTTCTCTaGCTTGGCCAGATGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEADAHKMSPNSTKTACQFQVLL*LGQMLQ Trigger: CTGGAGCATCTGGCCAAGGCAGAGAAGTACCTGAAA...CTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000237157.2 |
||
| CDS-3UTR GCA 90 bp | CATCAAACCTCCGCCCTCGTACCAGCAGTCTGGAGGCCTTTCCTAGGAGTTCAACAGGCATCCTTTGCTTaGTCAAATTGTTTGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HQTSALVPAVWRPFLGVQQASFA*SNCLAF Trigger: AAATGCCAAACAATTTGAGCAAGCAAAGGATGCCTG...TTGAACTCCTAGGAAAGGCCTCCAGACTGCTGGTACGAGGGCGGAGGTTTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237864.2 |
||
| CDS-3UTR GCA 90 bp | GATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGGATTCCCGTCCTGACACACCTCTCTaGAGCCACATAGTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DAHKMSPNSTKTACQDSRPDTPL*SHIVIS Trigger: AGAAATGACTATGTGGCTGCAGAGAGGTGTGTCAGG...ACGGGAATCCTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR CCA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCCATTTTCAAAAACATTaGCAGTCTGCTGATACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HENGVSGFPSPHLLISSGHFQKH*QSADTA Trigger: AGCTGTATCAGCAGACTGCCAATGTTTTTGAAAATG...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | TTCAACTGCCTGTCGGAGGCGCTCCTCATTTTCAAAAACATTGGCAGTCTGCTGCAGCATGAAAAAGACTaGATGGACATGAGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FNCLSEALLIFKNIGSLLQHEKD*MDMSPV Trigger: AACAGGGCTCATGTCCATTCAGTCTTTTTCATGCTG...CAGCAGACTGCCAATGTTTTTGAAAATGAGGAGCGCCTCCGACAGGCAGTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR GCA 90 bp | CATGCTGGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTGCATCTCCTTTTTAAAAGCAACAGCTaGTTTCCCATATTCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HAGFLDQLHCLRQLLHLLFKSNS*FPIFRS Trigger: GCTTCTGAATATGGGAAAGCAGCTGTTGCTTTTAAA...AAGGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR GCA 90 bp | AGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGTCTCCAGGTACATCATaGTGGCTTTCTCGATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SEADAHKMSPNSTKTACQSPGTS*WLSRSA Trigger: AGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGA...CTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR CCA 90 bp | AACATTCAACGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATGGTACTTCTCTGCCTTaGCCAGATGCTCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NIQRQDFSEADAHKMSPNGTSLP*PDAPAP Trigger: AGGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACC...ATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACGTTGAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000237157.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGCTGAAGACATTTACAACAGCACTTTAATATGCTACCTTCCATATTTTTGCTGTAGCTCTCCCTaGCACACCTCTCTGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRAEDIYNSTLICYLPYFCCSSP*HTSLQP Trigger: TGGCTGCAGAGAGGTGTGTCAGGGAGAGCTACAGCA...AAAATATGGAAGGTAGCATATTAAAGTGCTGTTGTAAATGTCTTCAGCCCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR GCA 90 bp | AATACTCTGCTGTTTAAAACCAAGCTCACTGTTGCTTCAGAGTGCGTTGAGAATGCTTTCTCGATCAGCTaGACTGCCTCAGGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTLLFKTKLTVASECVENAFSIS*TASGSF Trigger: GAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGC...ATTCTCAACGCACTCTGAAGCAACAGTGAGCTTGGTTTTAAACAGCAGAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR CCA 90 bp | CAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGCCAGGTACATCATGCTaGCTTTCTCGATCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QDFSEADAHKMSPNSTKTPGTSC*LSRSAA Trigger: TGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGG...CGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR CCA 90 bp | CGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAACCAGGTACATCATGCTaGCTTTCTCGATCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQDFSEADAHKMSPNSTKPGTSC*LSRSAA Trigger: TGCAGCTGATCGAGAAAGCCAGCATGATGTACCTGG...TTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | AAATATGACAGTGTTTTCTGCTTGCAATGGAAAGGAAAAACTGCTTCACAGGTATCTGCCTTGGCCAGATaGTCCAGCCCCTCGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KYDSVFCLQWKGKTASQVSALAR*SSPSLI Trigger: GATCAACGAGGGGCTGGAGCATCTGGCCAAGGCAGA...TACCTGTGAAGCAGTTTTTCCTTTCCATTGCAAGCAGAAAACACTGTCATATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000237157.2 |
||
| CDS-3UTR GCA 90 bp | CAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGTCTCCAGGTACATCATaGTGGCTTTCTCGATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDFSEADAHKMSPNSTKTSPGTS*WLSRSA Trigger: AGCTGATCGAGAAAGCCAGCATGATGTACCTGGAGA...CGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | CGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAACATTGTCCATGTATTTaGAAAGGGGCGAGTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQDFSEADAHKMSPNSTKHCPCI*KGASCR Trigger: TCTGCAACTCGCCCCTTTTCAAATACATGGACAATG...TTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
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| CDS-3UTR GCA 90 bp | TTCAACTGCCTGTCGGAGGCGCTCCTCATTTTCAAAAACATTGGCAGTCTGCTGTTTAAAAGCAACAGCTaGTTTCCCATATTCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FNCLSEALLIFKNIGSLLFKSNS*FPIFRS Trigger: GCTTCTGAATATGGGAAAGCAGCTGTTGCTTTTAAA...CAGCAGACTGCCAATGTTTTTGAAAATGAGGAGCGCCTCCGACAGGCAGTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CCA 90 bp | CCACATAGTCATTTCTGTGTAGATGAACTAAGACCTGAGCAATTGTTTTCTTATGGTACTTCTCTGCCTTaGCCAGATGCTCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHSHFCVDELRPEQLFSYGTSLP*PDAPAP Trigger: AGGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACC...ATAAGAAAACAATTGCTCAGGTCTTAGTTCATCTACACAGAAATGACTATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237157.2 |
||
| CDS-3UTR CCA 90 bp | GATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGGATTCCCGTCATTTTCAAAAACATTaGCAGTCTGCTGATACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DAHKMSPNSTKTACQDSRHFQKH*QSADTA Trigger: AGCTGTATCAGCAGACTGCCAATGTTTTTGAAAATG...ACGGGAATCCTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR TCA 90 bp | AAATATGACAGTGTTTTCTGCTTGCAATGGAAAGGAAAAACTGCTTCACAGGTAGGTCTACATTCTCTATaGGCTTTCCGGCTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KYDSVFCLQWKGKTASQVGLHSL*AFRLAP Trigger: TGGAGCGAGCCGGAAAGCTCATAGAGAATGTAGACC...TACCTGTGAAGCAGTTTTTCCTTTCCATTGCAAGCAGAAAACACTGTCATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
||
| CDS-3UTR GCA 90 bp | AAATATGACAGTGTTTTCTGCTTGCAATGGAAAGGAAAAACTGCTTCACAGGTAGCCTCAGGCAGCTTCTaGATCTCCTTCAGCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: KYDSVFCLQWKGKTASQVASGSF*ISFSIM Trigger: CATGATGCTGAAGGAGATGCAGAAGCTGCCTGAGGC...TACCTGTGAAGCAGTTTTTCCTTTCCATTGCAAGCAGAAAACACTGTCATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR GCA 90 bp | AATCTCAATGTAATTAAAGAGAATAAGCTGGTGACCAAAAGACCGGTGCAGGTACCTGACACACCTCTCTaGAGCCACATAGTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLNVIKENKLVTKRPVQVPDTPL*SHIVIS Trigger: AGAAATGACTATGTGGCTGCAGAGAGGTGTGTCAGG...TACCTGCACCGGTCTTTTGGTCACCAGCTTATTCTCTTTAATTACATTGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR CCA 90 bp | AACATTCAACGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATCTTGCTCATAAGCTTTaGCAGCATGAAAAAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NIQRQDFSEADAHKMSPNLAHKL*QHEKEP Trigger: GGGCTCTTTTTCATGCTGCCAAAGCTTATGAGCAAG...ATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACGTTGAATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR GCA 90 bp | AAATATGACAGTGTTTTCTGCTTGCAATGGAAAGGAAAAACTGCTTCACAGGTAGAGGCAGGCATCCTTTaGTTGCTCAAATTGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KYDSVFCLQWKGKTASQVEAGIL*LLKLFG Trigger: GCCAAACAATTTGAGCAAGCAAAGGATGCCTGCCTC...TACCTGTGAAGCAGTTTTTCCTTTCCATTGCAAGCAGAAAACACTGTCATATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR GCA 90 bp | AATCTCAATGTAATTAAAGAGAATAAGCTGGTGACCAAAAGACCGGTGCAGGTATTTCTGAATAGACAGTaGAGCTTCATCAAACCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NLNVIKENKLVTKRPVQVFLNRQ*SFIKPP Trigger: CGGAGGTTTGATGAAGCTGCACTGTCTATTCAGAAA...TACCTGCACCGGTCTTTTGGTCACCAGCTTATTCTCTTTAATTACATTGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| 3UTR CAA 72 bp | CACACAAGGGCTACTGAGCTAAAAATTATAAAGCTTTaGTCCAAAGCTTGTTTCCGAAAAGACTCAACAATT | + |
|
Preference number: 4 (lower is better) Translates to: HTRATELKIIKL*SKACFRKDSTI Trigger: AATTGTTGAGTCTTTTCGGAAACAAGCTTTGGACAAAAGCTTTATAATTTTTAGCTCAGTAGCCCTTGTGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR CAA 90 bp | TTCCGGCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTAGGTACTTCTCTGCCTaGGCCAGATGCTCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FRLAPGPWLLCPGCRSPGRYFSA*ARCSSP Trigger: GGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACCT...ACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGCCGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCATGCTGGCAGGTACTTCTCTGCCTaGGCCAGATGCTCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QGHGCCVRGAVLQVHHAGRYFSA*ARCSSP Trigger: GGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACCT...GCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CAA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCGCAGCACCATCAGGCTaGGCCTGGGGTGTCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HENGVSGFPSPHLLISSGAAPSG*AWGVAG Trigger: CCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGC...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR CAA 90 bp | GCTCGCTCCAGGGCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCGGAGGCAGGCATCCTTaGCTTGCTCAAATTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARSRAMAAVSGVPFSRYIGGRHP*LAQIVW Trigger: CCAAACAATTTGAGCAAGCAAAGGATGCCTGCCTCC...GATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGCCCTGGAGCGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CAA 90 bp | ATCATGCTGGCTTTCTCGATCAGCTGCACTGCCTCAGGCAGCTTCTGCATCTCCAGGTACTTCTCTGCCTaGGCCAGATGCTCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IMLAFSISCTASGSFCISRYFSA*ARCSSP Trigger: GGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACCT...GGAGATGCAGAAGCTGCCTGAGGCAGTGCAGCTGATCGAGAAAGCCAGCATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000236087.2 ENSMUST00000237157.2 ENSMUST00000237864.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGTCTGGAGGAGTGTCCGCTGAGGACCTGCTGTCTGCCTCTCTCTTTGGAACTCGGACACTTGGTCTaGGTCCTGCTGGTCGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KSLEECPLRTCCLPLSLELGHLV*VLLVVA Trigger: GGCTACGACCAGCAGGACCAAGACCAAGTGTCCGAG...TTCCAAAGAGAGAGGCAGACAGCAGGTCCTCAGCGGACACTCCTCCAGACTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
||
| CDS-3UTR CAA 90 bp | TCCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGCTCGGACACTTGGTCTaGGTCCTGCTGGTCGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: STKTACQDSRLLISSSPQLGHLV*VLLVVA Trigger: GGCTACGACCAGCAGGACCAAGACCAAGTGTCCGAG...CTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR CAA 90 bp | GATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGGATTCCCGTGCAGCACCATCAGGCTaGGCCTGGGGTGTCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DAHKMSPNSTKTACQDSRAAPSG*AWGVAG Trigger: CCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGC...ACGGGAATCCTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
||
| CDS-3UTR CAA 90 bp | GCCATGGCTGCTGTGTCCGGGGTGCCGTTCTCCAGGTACATCATGCTGGCTTTCGGAGGCAGGCATCCTTaGCTTGCTCAAATTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AMAAVSGVPFSRYIMLAFGGRHP*LAQIVW Trigger: CCAAACAATTTGAGCAAGCAAAGGATGCCTGCCTCC...GAAAGCCAGCATGATGTACCTGGAGAACGGCACCCCGGACACAGCAGCCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236087.2 ENSMUST00000237864.2 |
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| CDS-3UTR CAA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCTTGAAAAGGGGCGAGTaGCAGACCTCGGACACTTGG | + |
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Preference number: 5 (lower is better) Translates to: HENGVSGFPSPHLLISSGLKRGE*QTSDTW Trigger: CCAAGTGTCCGAGGTCTGCAACTCGCCCCTTTTCAA...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
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| CDS CCA 90 bp | GCCACACACATAGGGGATTCCCTTTTCCCAAGTGCTCCTCCTCCCTaGGATCTGTTCCTGTTCTCTTGGTTCCCGTGCCAGTTCTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: ATHIGDSLFPSAPPP*DLFLFSWFPCQFFQ Trigger: CTGAAAGAACTGGCACGGGAACCAAGAGAACAGGAACAGATCCCAGGGAGGAGGAGCACTTGGGAAAAGGGAATCCCCTATGTGTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS GCA 90 bp | AAGATTTGTGTGGGCCACACACATAGGGGATTCCCTTTTCCCAAGTaGTCCTCCTCCCTGGGATCTGTTCCTGTTCTCTTGGTTCCCGTG | + |
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Preference number: 5 (lower is better) Translates to: KICVGHTHRGFPFPK*SSSLGSVPVLLVPV Trigger: CACGGGAACCAAGAGAACAGGAACAGATCCCAGGGAGGAGGAGCACTTGGGAAAAGGGAATCCCCTATGTGTGTGGCCCACACAAATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS CCA 90 bp | CTTTTCCCAAGTGCTCCTCCTCCCTGGGATCTGTTCCTGTTCTCTTaGTTCCCGTGCCAGTTCTTTCAGCTGGAGACCAGAACTCAACCT | + |
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Preference number: 5 (lower is better) Translates to: LFPSAPPPWDLFLFS*FPCQFFQLETRTQP Trigger: AGGTTGAGTTCTGGTCTCCAGCTGAAAGAACTGGCACGGGAACCAAGAGAACAGGAACAGATCCCAGGGAGGAGGAGCACTTGGGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS-3UTR CAA 90 bp | CCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGGCAGGCATCCTTTGCTaGCTCAAATTGTTTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: PRKRRVRIPVSSSPHLLRAGILC*LKLFGI Trigger: AATGCCAAACAATTTGAGCAAGCAAAGGATGCCTGC...CCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| CDS-3UTR CAA 90 bp | GATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGGATTCCCGTTTGAAAAGGGGCGAGTaGCAGACCTCGGACACTTGG | + |
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Preference number: 5 (lower is better) Translates to: DAHKMSPNSTKTACQDSRLKRGE*QTSDTW Trigger: CCAAGTGTCCGAGGTCTGCAACTCGCCCCTTTTCAA...ACGGGAATCCTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
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| CDS-3UTR CAA 90 bp | CACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGCTCATTGTCCATGTATTaGAAAAGGGGCGAGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: HENGVSGFPSPHLLISSGSLSMY*KRGELQ Trigger: CTGCAACTCGCCCCTTTTCAAATACATGGACAATGA...GCCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
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| CDS-3UTR CAA 90 bp | CCACGAAAACGGCGTGTCAGGATTCCCGTCTCCTCATCTCCTCATCTCCTCAGGTCATTGTCCATGTATTaGAAAAGGGGCGAGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PRKRRVRIPVSSSPHLLRSLSMY*KRGELQ Trigger: CTGCAACTCGCCCCTTTTCAAATACATGGACAATGA...CCTGAGGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025474.14 ENSMUST00000235372.2 ENSMUST00000236925.2 |
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| CDS-3UTR CAA 90 bp | AACATTCAACGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATGCAGCACCATCAGGCTaGGCCTGGGGTGTCGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: NIQRQDFSEADAHKMSPNAAPSG*AWGVAG Trigger: CCCTGCGACACCCCAGGCCAAGCCTGATGGTGCTGC...ATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACGTTGAATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
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| CDS GCA 90 bp | AGTGCTCCTCCTCCCTGGGATCTGTTCCTGTTCTCTTGGTTCCCGTaGCAGTTCTTTCAGCTGGAGACCAGAACTCAACCTTATAACAAG | + |
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Preference number: 5 (lower is better) Translates to: SAPPPWDLFLFSWFP*QFFQLETRTQPYNK Trigger: CTTGTTATAAGGTTGAGTTCTGGTCTCCAGCTGAAAGAACTGGCACGGGAACCAAGAGAACAGGAACAGATCCCAGGGAGGAGGAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS-3UTR CAA 90 bp | AGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGTGTCAGTTGAAAAGGGGCGAGTaGCAGACCTCGGACACTTGG | + |
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Preference number: 5 (lower is better) Translates to: SEADAHKMSPNSTKTACQLKRGE*QTSDTW Trigger: CCAAGTGTCCGAGGTCTGCAACTCGCCCCTTTTCAA...CTGACACGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
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| CDS-3UTR CAA 90 bp | GATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATTCCACGAAAACGGCGCAGCATCATGCCAGCTaGCTCATAAGCTTTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: DFSEADAHKMSPNSTKTAQHHAS*LISFGS Trigger: GCTGCCAAAGCTTATGAGCAAGCTGGCATGATGCTG...CGCCGTTTTCGTGGAATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| CDS-3UTR CAA 90 bp | AACATTCAACGTCAGGATTTCAGTGAAGCAGATGCCCACAAAATGAGTCCTAATCTCGGACACTTGGTCTaGGTCCTGCTGGTCGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: NIQRQDFSEADAHKMSPNLGHLV*VLLVVA Trigger: GGCTACGACCAGCAGGACCAAGACCAAGTGTCCGAG...ATTAGGACTCATTTTGTGGGCATCTGCTTCACTGAAATCCTGACGTTGAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
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| CDS CCA 90 bp | AGTCATTTCTGTGTAGATGAACTAAGACCTGAGCAATTGTTTTCTTaGGTCTGTCCCAGGTACCCACGGCCAAGATTTGTGTGGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: SHFCVDELRPEQLFS*VCPRYPRPRFVWAT Trigger: TGTGGCCCACACAAATCTTGGCCGTGGGTACCTGGGACAGACCCAAGAAAACAATTGCTCAGGTCTTAGTTCATCTACACAGAAATGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS-3UTR CAA 90 bp | GGGAGGGCTGAAGACATTTACAACAGCACTTTAATATGCTACCTTCCATATTTTAGGTACTTCTCTGCCTaGGCCAGATGCTCCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: GRAEDIYNSTLICYLPYFRYFSA*ARCSSP Trigger: GGGGCTGGAGCATCTGGCCAAGGCAGAGAAGTACCT...AAAATATGGAAGGTAGCATATTAAAGTGCTGTTGTAAATGTCTTCAGCCCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| CDS CCA 90 bp | GGGATCTGTTCCTGTTCTCTTGGTTCCCGTGCCAGTTCTTTCAGCTaGAGACCAGAACTCAACCTTATAACAAGTTGGGTAGTTCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: GICSCSLGSRASSFS*RPELNLITSWVVLN Trigger: ATTGAGAACTACCCAACTTGTTATAAGGTTGAGTTCTGGTCTCCAGCTGAAAGAACTGGCACGGGAACCAAGAGAACAGGAACAGATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS-3UTR CAA 90 bp | AATACTCTGCTGTTTAAAACCAAGCTCACTGTTGCTTCAGAGTGCGTTGAGAATGGAGGCAGGCATCCTTaGCTTGCTCAAATTGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: NTLLFKTKLTVASECVENGGRHP*LAQIVW Trigger: CCAAACAATTTGAGCAAGCAAAGGATGCCTGCCTCC...ATTCTCAACGCACTCTGAAGCAACAGTGAGCTTGGTTTTAAACAGCAGAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025474.14 |
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| CDS-3UTR CAA 90 bp | AAATATGACAGTGTTTTCTGCTTGCAATGGAAAGGAAAAACTGCTTCACAGGTATCATTGTCCATGTATTaGAAAAGGGGCGAGTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: KYDSVFCLQWKGKTASQVSLSMY*KRGELQ Trigger: CTGCAACTCGCCCCTTTTCAAATACATGGACAATGA...TACCTGTGAAGCAGTTTTTCCTTTCCATTGCAAGCAGAAAACACTGTCATATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025474.14 ENSMUST00000236925.2 |
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| CDS GCA 72 bp | GTGGGCCACACACATAGGGGATTCCCTTTTCCCAAGTaGTCCTCCTCCCTGGGATCTGTTCCTGTTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: VGHTHRGFPFPK*SSSLGSVPVLL Trigger: CAAGAGAACAGGAACAGATCCCAGGGAGGAGGAGCACTTGGGAAAAGGGAATCCCCTATGTGTGTGGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS CAA 90 bp | CCTTTTCCCAAGTGCTCCTCCTCCCTGGGATCTGTTCCTGTTCTCTaGGTTCCCGTGCCAGTTCTTTCAGCTGGAGACCAGAACTCAACC | + |
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Preference number: 6 (lower is better) Translates to: PFPKCSSSLGSVPVL*VPVPVLSAGDQNST Trigger: GGTTGAGTTCTGGTCTCCAGCTGAAAGAACTGGCACGGGAACCAAGAGAACAGGAACAGATCCCAGGGAGGAGGAGCACTTGGGAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS GCA 72 bp | CCTCCCTGGGATCTGTTCCTGTTCTCTTGGTTCCCGTaGCAGTTCTTTCAGCTGGAGACCAGAACTCAACCT | + |
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Preference number: 6 (lower is better) Translates to: PPWDLFLFSWFP*QFFQLETRTQP Trigger: AGGTTGAGTTCTGGTCTCCAGCTGAAAGAACTGGCACGGGAACCAAGAGAACAGGAACAGATCCCAGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS CAA 90 bp | CAGCCACATAGTCATTTCTGTGTAGATGAACTAAGACCTGAGCAATaGTTTTCTTGGGTCTGTCCCAGGTACCCACGGCCAAGATTTGTG | + |
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Preference number: 6 (lower is better) Translates to: QPHSHFCVDELRPEQ*FSWVCPRYPRPRFV Trigger: CACAAATCTTGGCCGTGGGTACCTGGGACAGACCCAAGAAAACAATTGCTCAGGTCTTAGTTCATCTACACAGAAATGACTATGTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS CCA 72 bp | TGTGTAGATGAACTAAGACCTGAGCAATTGTTTTCTTaGGTCTGTCCCAGGTACCCACGGCCAAGATTTGTG | + |
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Preference number: 6 (lower is better) Translates to: CVDELRPEQLFS*VCPRYPRPRFV Trigger: CACAAATCTTGGCCGTGGGTACCTGGGACAGACCCAAGAAAACAATTGCTCAGGTCTTAGTTCATCTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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| CDS CAA 72 bp | AGTCATTTCTGTGTAGATGAACTAAGACCTGAGCAATaGTTTTCTTGGGTCTGTCCCAGGTACCCACGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SHFCVDELRPEQ*FSWVCPRYPRP Trigger: TGGCCGTGGGTACCTGGGACAGACCCAAGAAAACAATTGCTCAGGTCTTAGTTCATCTACACAGAAATGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150267.2 |
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