Pregenerated sensors for NAPEPLD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044968Ensembl transcript IDs: ENSMUST00000060899.9, ENSMUST00000115217.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCTTGGGGCAGGGAGCAGGAGAGAGTACAGAGGAAGTAGAAAGTaGGAGCCGCCCCAGTGCGTGAAGTCCTCCCACTCAGGAATACAT | + |
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Preference number: 1 (lower is better) Translates to: HLGAGSRREYRGSRK*EPPQCVKSSHSGIH Trigger: ATGTATTCCTGAGTGGGAGGACTTCACGCACTGGGGCGGCTCTCACTTTCTACTTCCTCTGTACTCTCTCCTGCTCCCTGCCCCAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR GCA 90 bp | TTGGACAGGGTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTaGCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATG | + |
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Preference number: 1 (lower is better) Translates to: LDRVCPKSQTHSCLL*PSALNLGNAAVWMM Trigger: CATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGACCCTGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CCA 90 bp | TGCCTTCTCTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTaGATGATGCCCTCTCAGAGATGTAAGTGCATGATGCTCATGGCC | + |
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Preference number: 1 (lower is better) Translates to: CLLCPSALNLGNAAV*MMPSQRCKCMMLMA Trigger: GGCCATGAGCATCATGCACTTACATCTCTGAGAGGGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CCA 90 bp | ACTCAGGAATACATCCTCTCCTGTGGGAGAGGCTTCAGTTATAGCTaGGTTTGGACAGGGTCTGCCCTAAGTCCCAAACCCACTCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: TQEYILSCGRGFSYS*VWTGSALSPKPTLA Trigger: GGCAAGAGTGGGTTTGGGACTTAGGGCAGACCCTGTCCAAACCCAGCTATAACTGAAGCCTCTCCCACAGGAGAGGATGTATTCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CCA 90 bp | GAATACATCCTCTCCTGTGGGAGAGGCTTCAGTTATAGCTGGGTTTaGACAGGGTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: EYILSCGRGFSYSWV*TGSALSPKPTLAFS Trigger: AGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGACCCTGTCCAAACCCAGCTATAACTGAAGCCTCTCCCACAGGAGAGGATGTATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CCA 90 bp | ATCCCAATTCATCCCAGGACCAGACCACAAATCACATGGGAAGCCTaGACCATGTCCATGTGGGCACAAAAGCTATGCCAAGGCCGTTCA | + |
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Preference number: 1 (lower is better) Translates to: IPIHPRTRPQITWEA*TMSMWAQKLCQGRS Trigger: TGAACGGCCTTGGCATAGCTTTTGTGCCCACATGGACATGGTCCAGGCTTCCCATGTGATTTGTGGTCTGGTCCTGGGATGAATTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR GCA 90 bp | CCTACGGTCCAGATTCATGTCCGCTTGCAGTGGAGAGCCGACGCTTaGCCGGTTTTCCTCAAGCTGACTTTAAATGGAATCTTGTGCATT | + |
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Preference number: 1 (lower is better) Translates to: PTVQIHVRLQWRADA*PVFLKLTLNGILCI Trigger: AATGCACAAGATTCCATTTAAAGTCAGCTTGAGGAAAACCGGGCAAGCGTCGGCTCTCCACTGCAAGCGGACATGAATCTGGACCGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CCA 90 bp | CATGAGGCAATCCCAATTCATCCCAGGACCAGACCACAAATCACATaGGAAGCCTGGACCATGTCCATGTGGGCACAAAAGCTATGCCAA | + |
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Preference number: 1 (lower is better) Translates to: HEAIPIHPRTRPQIT*EAWTMSMWAQKLCQ Trigger: TTGGCATAGCTTTTGTGCCCACATGGACATGGTCCAGGCTTCCCATGTGATTTGTGGTCTGGTCCTGGGATGAATTGGGATTGCCTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR GCA 90 bp | GACGCTTGCCCGGTTTTCCTCAAGCTGACTTTAAATGGAATCTTGTaGATTAGTGCCTCTGAGCCACATTCACTGTACACGCAGGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: DACPVFLKLTLNGIL*ISASEPHSLYTQGY Trigger: GTAACCCTGCGTGTACAGTGAATGTGGCTCAGAGGCACTAATGCACAAGATTCCATTTAAAGTCAGCTTGAGGAAAACCGGGCAAGCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR GCA 90 bp | ATCACATGGGAAGCCTGGACCATGTCCATGTGGGCACAAAAGCTATaGCAAGGCCGTTCATGCAGAAATATTAAAGCTATATCAGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ITWEAWTMSMWAQKL*QGRSCRNIKAISAA Trigger: AGCAGCTGATATAGCTTTAATATTTCTGCATGAACGGCCTTGGCATAGCTTTTGTGCCCACATGGACATGGTCCAGGCTTCCCATGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CCA 90 bp | TGGACTGCAGGTGTGCATCACCACGACCAGCAGTTAATGACCATGTaGAGGTCAAGTTTATCATTACATAAATATAAGAAAGGGGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: WTAGVHHHDQQLMTM*RSSLSLHKYKKGVC Trigger: ACACACCCCTTTCTTATATTTATGTAATGATAAACTTGACCTCCACATGGTCATTAACTGCTGGTCGTGGTGATGCACACCTGCAGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR TCA 90 bp | CCACATTCACTGTACACGCAGGGTTACAGTACACATCTCTCCTTGTaGGTGGTGGAAACCTTTTATATAAAAATACTACATTCTGATGGT | + |
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Preference number: 1 (lower is better) Translates to: PHSLYTQGYSTHLSL*VVETFYIKILHSDG Trigger: ACCATCAGAATGTAGTATTTTTATATAAAAGGTTTCCACCACTCACAAGGAGAGATGTGTACTGTAACCCTGCGTGTACAGTGAATGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CCA 90 bp | TATATAATATTTGATATATATAGAAAACTCACTGCTTTGTCCCATTaGTCTAGAAAGCAGAAGCAGAGTGTACGTTCACTAAGACCCCGC | + |
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Preference number: 1 (lower is better) Translates to: YIIFDIYRKLTALSH*SRKQKQSVRSLRPR Trigger: GCGGGGTCTTAGTGAACGTACACTCTGCTTCTGCTTTCTAGACCAATGGGACAAAGCAGTGAGTTTTCTATATATATCAAATATTATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTCTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATGCCGCTGGACTGCAGGTGTaGATCACCACGACCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PSLPISLEPGKCSCVDDAAGLQV*ITTTSS Trigger: ACTGCTGGTCGTGGTGATGCACACCTGCAGTCCAGC...GGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CAA 90 bp | TGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTGCCCATCAGCCTaGAACCTGGGAAATGCAGCTGTGTGGATGATGCCCTCTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CPKSQTHSCLLCPSA*NLGNAAVWMMPSQR Trigger: TCTCTGAGAGGGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGTACAGAACAAACCTGTGAATGCAGAGGCGTACTGGGACAAAGCCTGGGCATCTGCCCATCAGCCTTaGACCTGGGAAATGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: KVQNKPVNAEAYWDKAWASAHQP*TWEMQL Trigger: CAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGA...TGCCCAGGCTTTGTCCCAGTACGCCTCTGCATTCACAGGTTTGTTCTGTACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTGTACATCTGTCTACCTaGCATCTTGGGGCAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: HQREHCSSAVYCACLHQSVHLST*HLGAGS Trigger: GCTCCCTGCCCCAAGATGTCAGGTAGACAGATGTAC...ACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGTACAGAACAAACCTGTGAATGCAGAGGCGTACTGGGACAAAGCCTGGGCACACTCTTGCCTTCTCTaGCCATCAGCCTTGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: KVQNKPVNAEAYWDKAWAHSCLL*PSALNL Trigger: CAGGTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTG...TGCCCAGGCTTTGTCCCAGTACGCCTCTGCATTCACAGGTTTGTTCTGTACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGAATACATCCTCTCCTGTGGGAGAGGCTTCAGTTATAGCTGGGTTTGGACATCCCAAACCCACTCTTaGCTTCTCTGCCCATCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QEYILSCGRGFSYSWVWTSQTHS*LLCPSA Trigger: GGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGA...TGTCCAAACCCAGCTATAACTGAAGCCTCTCCCACAGGAGAGGATGTATTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR CCA 90 bp | AACAATGCATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCAAATGCAGAGGCGTACTaGGACAAAGCCTGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NNASTGALLFSCLLCLSANAEAY*DKAWAA Trigger: TGCTGCCCAGGCTTTGTCCCAGTACGCCTCTGCATT...TGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATGCATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR TCA 90 bp | TATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGCTGAGCCGCCCCAGTGCGTaGAGTCCTCCCACTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: YISCLREVSVWLTVTQWLSRPSA*SPPTQE Trigger: TTCCTGAGTGGGAGGACTTCACGCACTGGGGCGGCT...CAGCCACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTTGGGCAAAATTCCAATaGGAGGCCAAGGTGACATGC | + |
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Preference number: 2 (lower is better) Translates to: HQREHCSSAVYCACLHQSWAKFQ*EAKVTC Trigger: GCATGTCACCTTGGCCTCTCATTGGAATTTTGCCCA...ACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGAATACATCCTCTCCTGTGGGAGAGGCTTCAGTTATAGCTGGGTTTGGACACACTCTTGCCTTCTCTaGCCATCAGCCTTGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: QEYILSCGRGFSYSWVWTHSCLL*PSALNL Trigger: CAGGTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTG...TGTCCAAACCCAGCTATAACTGAAGCCTCTCCCACAGGAGAGGATGTATTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR CCA 90 bp | AACAATGCATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATACTGGGACAAAGCCTaGGCAGCAGATAGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: NNASTGALLFSCLLCLSAYWDKA*AADSHR Trigger: TCTGTGGCTATCTGCTGCCCAGGCTTTGTCCCAGTA...TGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATGCATTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTGGACAGGGTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTGCCCATAACTTGTCACCTGTCTaGTTATTCTTTGGAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VWTGSALSPKPTLAFSAHNLSPV*LFFGVL Trigger: CAGCACTCCAAAGAATAAGCAGACAGGTGACAAGTT...ATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGACCCTGTCCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR CCA 90 bp | AACAATGCATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCAGGAAATGCAGCTGTGTaGATGATGCCCTCTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NNASTGALLFSCLLCLSAGNAAV*MMPSQR Trigger: TCTCTGAGAGGGCATCATCCACACAGCTGCATTTCC...TGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATGCATTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | AACAATGCATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCAGAGGCCAAGGTGACATaGATCACCCATGCAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: NNASTGALLFSCLLCLSAEAKVT*ITHANE Trigger: TTCATTTGCATGGGTGATGCATGTCACCTTGGCCTC...TGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATGCATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAACCATTCAATAGGGTGGTTGTGTGAGAGAGATTTGGTGTACTTCACGAGTTCTGCCCATCAGCCTTaGACCTGGGAAATGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: ENHSIGWLCERDLVYFTSSAHQP*TWEMQL Trigger: CAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGA...ACTCGTGAAGTACACCAAATCTCTCTCACACAACCACCCTATTGAATGGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | CATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTAACTTGTCACCTGTCTaGTTATTCTTTGGAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HQREHCSSAVYCACLHQSNLSPV*LFFGVL Trigger: CAGCACTCCAAAGAATAAGCAGACAGGTGACAAGTT...ACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATGCCCTCTCACAGTTAATGACCATGTaGAGGTCAAGTTTATCATTA | + |
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Preference number: 2 (lower is better) Translates to: LPISLEPGKCSCVDDALSQLMTM*RSSLSL Trigger: TAATGATAAACTTGACCTCCACATGGTCATTAACTG...TGAGAGGGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCTATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGTCTACCTGACATCTTaGGGCAGGGAGCAGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KLYQLLKRSFSVAYSNTVVYLTS*GREQER Trigger: TCTCTCCTGCTCCCTGCCCCAAGATGTCAGGTAGAC...CACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTGATACCATAAGTTTTGAACAAACCTGTGAATaGAGAGGCGTACTGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: CSSAVYCACLHQSDTISFEQTCE*RGVLGQ Trigger: TTGTCCCAGTACGCCTCTGCATTCACAGGTTTGTTC...AAAACTTATGGTATCACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR CCA 90 bp | TATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGCTGCCCCAGTTCAGCATCTaGGCAGGAACAATGCATCAA | + |
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Preference number: 2 (lower is better) Translates to: YISCLREVSVWLTVTQWLPQFSI*AGTMHQ Trigger: TTGATGCATTGTTCCTGCCCAGATGCTGAACTGGGG...CAGCCACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAATGCAGCTGTGTGGATGATGCCCTCTCAGAGATGTAAGTGCATGATGCTCCTCTGTAGAAAGCCCTaGATAGAAAAAGAAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: GNAAVWMMPSQRCKCMMLLCRKP*IEKEME Trigger: TTCCATTTCTTTTTCTATTCAGGGCTTTCTACAGAG...GAGCATCATGCACTTACATCTCTGAGAGGGCATCATCCACACAGCTGCATTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAACCATTCAATAGGGTGGTTGTGTGAGAGAGATTTGGTGTACTTCACGAGTGAGGCCAAGGTGACATaGATCACCCATGCAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: ENHSIGWLCERDLVYFTSEAKVT*ITHANE Trigger: TTCATTTGCATGGGTGATGCATGTCACCTTGGCCTC...ACTCGTGAAGTACACCAAATCTCTCTCACACAACCACCCTATTGAATGGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAACCATTCAATAGGGTGGTTGTGTGAGAGAGATTTGGTGTACTTCACGAGTTGTCTGCTTATTCTTTaGAGTGCTGGACTGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ENHSIGWLCERDLVYFTSCLLIL*SAGLQV Trigger: CACCTGCAGTCCAGCACTCCAAAGAATAAGCAGACA...ACTCGTGAAGTACACCAAATCTCTCTCACACAACCACCCTATTGAATGGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAATGCAGCTGTGTGGATGATGCCCTCTCAGAGATGTAAGTGCATGATGCTCAACAAAACACACACTTaGAGAAATTGTTTCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: GNAAVWMMPSQRCKCMMLNKTHT*RNCFHV Trigger: CACATGGAAACAATTTCTGCAAGTGTGTGTTTTGTT...GAGCATCATGCACTTACATCTCTGAGAGGGCATCATCCACACAGCTGCATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCTATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGAACAAACCTGTGAATaGAGAGGCGTACTGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: KLYQLLKRSFSVAYSNTVEQTCE*RGVLGQ Trigger: TTGTCCCAGTACGCCTCTGCATTCACAGGTTTGTTC...CACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCTATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGATGGTCGCTCATATTaGCTATTCCCCTCTAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: KLYQLLKRSFSVAYSNTVDGRSY*LFPSKV Trigger: GACTTTAGAGGGGAATAGCCAATATGAGCGACCATC...CACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR TCA 90 bp | TATCATTACATAAATATAAGAAAGGGGTGTGTGTGTGGTGTGTGTGTGGTGTGTCTCTGTAGAAAGCCCTaGATAGAAAAAGAAATGGAA | + |
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Preference number: 2 (lower is better) Translates to: YHYINIRKGCVCGVCVVCLCRKP*IEKEME Trigger: TTCCATTTCTTTTTCTATTCAGGGCTTTCTACAGAG...ACACACCACACACACACCACACACACACCCCTTTCTTATATTTATGTAATGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR-3UTR GCA 90 bp | TATCATTACATAAATATAAGAAAGGGGTGTGTGTGTGGTGTGTGTGTGGTGTGTAACAAAACACACACTTaGAGAAATTGTTTCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: YHYINIRKGCVCGVCVVCNKTHT*RNCFHV Trigger: CACATGGAAACAATTTCTGCAAGTGTGTGTTTTGTT...ACACACCACACACACACCACACACACACCCCTTTCTTATATTTATGTAATGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR CAA 90 bp | AGTACTCCCTATATAATATTTGATATATATAGAAAACTCACTGCTTaGTCCCATTGGTCTAGAAAGCAGAAGCAGAGTGTACGTTCACTA | + |
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Preference number: 2 (lower is better) Translates to: STPYIIFDIYRKLTA*SHWSRKQKQSVRSL Trigger: TAGTGAACGTACACTCTGCTTCTGCTTTCTAGACCAATGGGACAAAGCAGTGAGTTTTCTATATATATCAAATATTATATAGGGAGTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR GCA 72 bp | GTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTaGCCATCAGCCTTGAACCTGGGAAATGCAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VCPKSQTHSCLL*PSALNLGNAAV Trigger: CACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| 3UTR TCA 72 bp | CGCTCATATTGGCTATTCCCCTCTAAAGTCACAAGGTaGGTGGGTGAGGTGGTCAGCCCCCAGTTCAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: RSYWLFPSKVTR*VGEVVSPQFSI Trigger: GATGCTGAACTGGGGGCTGACCACCTCACCCACTCACCTTGTGACTTTAGAGGGGAATAGCCAATATGAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR GCA 72 bp | TTGGACAGGGTCTGCCCTAAGTCCCAAACCCACTCTTaGCTTCTCTGCCCATCAGCCTTGAACCTGGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LDRVCPKSQTHS*LLCPSALNLGN Trigger: ATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGACCCTGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR GCA 72 bp | TGGTCAGCCCCCAGTTCAGCATCTGGGCAGGAACAATaGATCAACGGGAGCATTGCTCTTCAGCTGTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: WSAPSSASGQEQ*INGSIALQLST Trigger: AGTAGACAGCTGAAGAGCAATGCTCCCGTTGATGCATTGTTCCTGCCCAGATGCTGAACTGGGGGCTGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | GCTGGCCTTGAACTTGTCACCTGTCTGCTTATTCTTTaGAGTGCTGGACTGCAGGTGTGCATCACCACGACC | + |
|
Preference number: 3 (lower is better) Translates to: AGLELVTCLLIL*SAGLQVCITTT Trigger: GGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGCAGACAGGTGACAAGTTCAAGGCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | CTCTCCTGTGGGAGAGGCTTCAGTTATAGCTGGGTTTaGACAGGGTCTGCCCTAAGTCCCAAACCCACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSCGRGFSYSWV*TGSALSPKPTL Trigger: AAGAGTGGGTTTGGGACTTAGGGCAGACCCTGTCCAAACCCAGCTATAACTGAAGCCTCTCCCACAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | TACATCCTCTCCTGTGGGAGAGGCTTCAGTTATAGCTaGGTTTGGACAGGGTCTGCCCTAAGTCCCAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: YILSCGRGFSYS*VWTGSALSPKP Trigger: GGGTTTGGGACTTAGGGCAGACCCTGTCCAAACCCAGCTATAACTGAAGCCTCTCCCACAGGAGAGGATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | TATTCCCCTCTAAAGTCACAAGGTGAGTGGGTGAGGTaGTCAGCCCCCAGTTCAGCATCTGGGCAGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: YSPLKSQGEWVR*SAPSSASGQEQ Trigger: TTGTTCCTGCCCAGATGCTGAACTGGGGGCTGACCACCTCACCCACTCACCTTGTGACTTTAGAGGGGAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | CATATTGGCTATTCCCCTCTAAAGTCACAAGGTGAGTaGGTGAGGTGGTCAGCCCCCAGTTCAGCATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HIGYSPLKSQGE*VRWSAPSSASG Trigger: CCCAGATGCTGAACTGGGGGCTGACCACCTCACCCACTCACCTTGTGACTTTAGAGGGGAATAGCCAATATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | CATCCCAGGACCAGACCACAAATCACATGGGAAGCCTaGACCATGTCCATGTGGGCACAAAAGCTATGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HPRTRPQITWEA*TMSMWAQKLCQ Trigger: TTGGCATAGCTTTTGTGCCCACATGGACATGGTCCAGGCTTCCCATGTGATTTGTGGTCTGGTCCTGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTACAGAACAAACCTGTGAATGCAGAGGCGTACTGGGACAAAGCCTGGGCACTGTCTGCTTATTCTTaGGAGTGCTGGACTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KVQNKPVNAEAYWDKAWALSAYS*ECWTAG Trigger: ACCTGCAGTCCAGCACTCCAAAGAATAAGCAGACAG...TGCCCAGGCTTTGTCCCAGTACGCCTCTGCATTCACAGGTTTGTTCTGTACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR GCA 72 bp | CAGATTCATGTCCGCTTGCAGTGGAGAGCCGACGCTTaGCCGGTTTTCCTCAAGCTGACTTTAAATGGAATC | + |
|
Preference number: 3 (lower is better) Translates to: QIHVRLQWRADA*PVFLKLTLNGI Trigger: GATTCCATTTAAAGTCAGCTTGAGGAAAACCGGGCAAGCGTCGGCTCTCCACTGCAAGCGGACATGAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | AAACCTGTGAATGCAGAGGCGTACTGGGACAAAGCCTaGGCAGCAGATAGCCACAGAGTAACTACTGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: KPVNAEAYWDKA*AADSHRVTTGI Trigger: AATGCCAGTAGTTACTCTGTGGCTATCTGCTGCCCAGGCTTTGTCCCAGTACGCCTCTGCATTCACAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTGATACCATAAGTTTTCTCTGCCCATCAGCCTaGAACCTGGGAAATGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CSSAVYCACLHQSDTISFLCPSA*NLGNAA Trigger: AGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAG...AAAACTTATGGTATCACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACCATTCAATAGGGTGGTTGTGTGAGAGAGATTTGGTGTACTTCACGAGTTGTCTACCTGACATCTaGGGGCAGGGAGCAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ENHSIGWLCERDLVYFTSCLPDI*GQGAGE Trigger: CTCTCCTGCTCCCTGCCCCAAGATGTCAGGTAGACA...ACTCGTGAAGTACACCAAATCTCTCTCACACAACCACCCTATTGAATGGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTATTCTTTGGAGTGCTGGACTGCAGGTGTGCATCACCACGACCAGCAGTTAACACACTTGCAGAAATaGTTTCCATGTGAAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AYSLECWTAGVHHHDQQLTHLQK*FPCEKC Trigger: ACACTTTTCACATGGAAACAATTTCTGCAAGTGTGT...TAACTGCTGGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR TCA 72 bp | GTAATCAAGTCCATGATGGGATGGGCAAAATTCCAATaGGAGGCCAAGGTGACATGCATCACCCATGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VIKSMMGWAKFQ*EAKVTCITHAN Trigger: ATTTGCATGGGTGATGCATGTCACCTTGGCCTCTCATTGGAATTTTGCCCATCCCATCATGGACTTGATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR GCA 72 bp | CCGGTTTTCCTCAAGCTGACTTTAAATGGAATCTTGTaGATTAGTGCCTCTGAGCCACATTCACTGTACACG | + |
|
Preference number: 3 (lower is better) Translates to: PVFLKLTLNGIL*ISASEPHSLYT Trigger: CGTGTACAGTGAATGTGGCTCAGAGGCACTAATGCACAAGATTCCATTTAAAGTCAGCTTGAGGAAAACCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGCTGTCTGCTTATTCTTaGGAGTGCTGGACTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KLYQLLKRSFSVAYSNTVLSAYS*ECWTAG Trigger: ACCTGCAGTCCAGCACTCCAAAGAATAAGCAGACAG...CACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACCATTCAATAGGGTGGTTGTGTGAGAGAGATTTGGTGTACTTCACGAGTAGAAAACTCACTGCTTaGTCCCATTGGTCTAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ENHSIGWLCERDLVYFTSRKLTA*SHWSRK Trigger: CTTTCTAGACCAATGGGACAAAGCAGTGAGTTTTCT...ACTCGTGAAGTACACCAAATCTCTCTCACACAACCACCCTATTGAATGGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | TTATCATTACATAAATATAAGAAAGGGGTGTGTGTGTaGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLHKYKKGVCV*CVCGVCVCVCV Trigger: CACACACACACACACACACACACCACACACACACCACACACACACCCCTTTCTTATATTTATGTAATGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | GCAGATAGCCACAGAGTAACTACTGGCATTTCACAATaGCTTACTAAAAGGTACACTTGTGCTTATAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ADSHRVTTGISQ*LTKRYTCAYRS Trigger: TGACCTATAAGCACAAGTGTACCTTTTAGTAAGCCATTGTGAAATGCCAGTAGTTACTCTGTGGCTATCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR-3UTR CAA 90 bp | TATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGCTGACACACTTGCAGAAATaGTTTCCATGTGAAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YISCLREVSVWLTVTQWLTHLQK*FPCEKC Trigger: ACACTTTTCACATGGAAACAATTTCTGCAAGTGTGT...CAGCCACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CCA 72 bp | TTTGATATATATAGAAAACTCACTGCTTTGTCCCATTaGTCTAGAAAGCAGAAGCAGAGTGTACGTTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: FDIYRKLTALSH*SRKQKQSVRSL Trigger: TAGTGAACGTACACTCTGCTTCTGCTTTCTAGACCAATGGGACAAAGCAGTGAGTTTTCTATATATATCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CAA 72 bp | GGCACCCGTGGCCCTACGGTCCAGATTCATGTCCGCTaGCAGTGGAGAGCCGACGCTTGCCCGGTTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTRGPTVQIHVR*QWRADACPVFL Trigger: GAGGAAAACCGGGCAAGCGTCGGCTCTCCACTGCAAGCGGACATGAATCTGGACCGTAGGGCCACGGGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCTTATTCTTTGGAGTGCTGGACTGCAGGTGTGCATCACCACGACCAGCACCAGGAGGGTCCTTTTaGACCAGTGCTGGGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VCLFFGVLDCRCASPRPAPGGSF*TSAGKA Trigger: CGCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGG...TGCTGGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CAA 72 bp | TCCCAAACCCACTCTTGCCTTCTCTGCCCATCAGCCTaGAACCTGGGAAATGCAGCTGTGTGGATGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQTHSCLLCPSA*NLGNAAVWMMP Trigger: GGGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATGCCCCTGGAACGCCGCTGTaGTTCTTCTCCATTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPISLEPGKCSCVDDAPGTPL*FFSIIS Trigger: GCTGATAATGGAGAAGAATCACAGCGGCGTTCCAGG...GGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTGCCCATCAGCCTTGAACTGGATACTGATAGCTTaGCGCTGGAGACTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCPKSQTHSCLLCPSALNWILIA*RWRLAV Trigger: GACAGCCAGTCTCCAGCGCCAAGCTATCAGTATCCA...GTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCTCTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATGCCCCATTATCAGCCATCTaGGCACATTCGGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLPISLEPGKCSCVDDAPLSAI*AHSGWR Trigger: TCTCCATCCCGAATGTGCTCAGATGGCTGATAATGG...GGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTGCCCATCAGCCTTGAACTGTCAAGTTCCTCTTTaGAACCTGGAACGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCPKSQTHSCLLCPSALNCQVPL*NLERRC Trigger: ACAGCGGCGTTCCAGGTTCCAAAGAGGAACTTGACA...GTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | GCTTATTCTTTGGAGTGCTGGACTGCAGGTGTGCATCACCACGACCAGCAGTTATCGCAGCCACATTTCTaGATCCAGTCAAGAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AYSLECWTAGVHHHDQQLSQPHF*IQSRRP Trigger: GGGCCTTCTTGACTGGATGCAGAAATGTGGCTGCGA...TAACTGCTGGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | AAGGTACAGAACAAACCTGTGAATGCAGAGGCGTACTGGGACAAAGCCTGGGCATCGCAGCCACATTTCTaGATCCAGTCAAGAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KVQNKPVNAEAYWDKAWASQPHF*IQSRRP Trigger: GGGCCTTCTTGACTGGATGCAGAAATGTGGCTGCGA...TGCCCAGGCTTTGTCCCAGTACGCCTCTGCATTCACAGGTTTGTTCTGTACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | CATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTTGGATACTGATAGCTTaGCGCTGGAGACTGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HQREHCSSAVYCACLHQSWILIA*RWRLAV Trigger: GACAGCCAGTCTCCAGCGCCAAGCTATCAGTATCCA...ACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | GCTTATTCTTTGGAGTGCTGGACTGCAGGTGTGCATCACCACGACCAGCAGTTAAAGCTCCGATGGGAATaGCCGCAAGGTCAAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AYSLECWTAGVHHHDQQLKLRWE*PQGQKD Trigger: GTCCTTTTGACCTTGCGGCCATTCCCATCGGAGCTT...TAACTGCTGGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR TCA 90 bp | GCTTATTCTTTGGAGTGCTGGACTGCAGGTGTGCATCACCACGACCAGCAGTTACCATTATCAGCCATCTaGGCACATTCGGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYSLECWTAGVHHHDQQLPLSAI*AHSGWR Trigger: TCTCCATCCCGAATGTGCTCAGATGGCTGATAATGG...TAACTGCTGGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTGATACCATAAGTTTTCATGTCCCAGCCACGTaGCTCGTAAGCCAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSSAVYCACLHQSDTISFHVPAT*LVSQPL Trigger: GAGAGGCTGGCTTACGAGTCACGTGGCTGGGACATG...AAAACTTATGGTATCACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CAA 72 bp | CCAGATTCATGTCCGCTTGCAGTGGAGAGCCGACGCTaGCCCGGTTTTCCTCAAGCTGACTTTAAATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PDSCPLAVESRR*PGFPQADFKWN Trigger: ATTCCATTTAAAGTCAGCTTGAGGAAAACCGGGCAAGCGTCGGCTCTCCACTGCAAGCGGACATGAATCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACCATTCAATAGGGTGGTTGTGTGAGAGAGATTTGGTGTACTTCACGAGTCATGTCCCAGCCACGTaGCTCGTAAGCCAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENHSIGWLCERDLVYFTSHVPAT*LVSQPL Trigger: GAGAGGCTGGCTTACGAGTCACGTGGCTGGGACATG...ACTCGTGAAGTACACCAAATCTCTCTCACACAACCACCCTATTGAATGGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATGCCCTCTCATCTCAGTGTTTCTTTTaGATACTGATAGCTTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPISLEPGKCSCVDDALSSQCFF*ILIAWR Trigger: GCGCCAAGCTATCAGTATCCAAAAGAAACACTGAGA...TGAGAGGGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATGCCCTCTCAGTCTTTTCCTTTCTTTaGTTTAGTTACGTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPISLEPGKCSCVDDALSVFSFL*FSYVLL Trigger: GAGGAGGACGTAACTAAATCAAAGAAAGGAAAAGAC...TGAGAGGGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTGCCCATCAGCCTTGAACGTCTTTTCCTTTCTTTaGTTTAGTTACGTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCPKSQTHSCLLCPSALNVFSFL*FSYVLL Trigger: GAGGAGGACGTAACTAAATCAAAGAAAGGAAAAGAC...GTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTGCCCATCAGCCTTGAACAGCATCTTCTGGGTCTaGATGCTGGTATTTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCPKSQTHSCLLCPSALNSIFWV*MLVFHK Trigger: TTTATGAAATACCAGCATGCAGACCCAGAAGATGCT...GTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | CATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTTTTCCATGTTGGCCATaGGTTAACAAATCTCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HQREHCSSAVYCACLHQSFPCWP*VNKSPV Trigger: GACGGGAGATTTGTTAACCCATGGCCAACATGGAAA...ACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | TATCATTACATAAATATAAGAAAGGGGTGTGTGTGTGGTGTGTGTGTGGTGTGTCCAGGAGGGTCCTTTTaGACCAGTGCTGGGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YHYINIRKGCVCGVCVVCPGGSF*TSAGKA Trigger: CGCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGG...ACACACCACACACACACCACACACACACCCCTTTCTTATATTTATGTAATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | CATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTTCTCAGTGTTTCTTTTaGATACTGATAGCTTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HQREHCSSAVYCACLHQSSQCFF*ILIAWR Trigger: GCGCCAAGCTATCAGTATCCAAAAGAAACACTGAGA...ACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | GCTTATTCTTTGGAGTGCTGGACTGCAGGTGTGCATCACCACGACCAGCAGTTATTTCATAAACCACCTTaGTTCATAAGCTCCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AYSLECWTAGVHHHDQQLFHKPP*FISSDG Trigger: CCCATCGGAGCTTATGAACCAAGGTGGTTTATGAAA...TAACTGCTGGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | AAGGTACAGAACAAACCTGTGAATGCAGAGGCGTACTGGGACAAAGCCTGGGCATCTGGGTCTGCATGCTaGTATTTCATAAACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVQNKPVNAEAYWDKAWASGSAC*YFINHL Trigger: AAGGTGGTTTATGAAATACCAGCATGCAGACCCAGA...TGCCCAGGCTTTGTCCCAGTACGCCTCTGCATTCACAGGTTTGTTCTGTACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | AACAATGCATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCACCTTACAGCATCTTCTaGGTCTGCATGCTGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: NNASTGALLFSCLLCLSAPYSIF*VCMLVF Trigger: AAATACCAGCATGCAGACCCAGAAGATGCTGTAAGG...TGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATGCATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | GGAAATGCAGCTGTGTGGATGATGCCCTCTCAGAGATGTAAGTGCATGATGCTCTCTGGGTCTGCATGCTaGTATTTCATAAACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNAAVWMMPSQRCKCMMLSGSAC*YFINHL Trigger: AAGGTGGTTTATGAAATACCAGCATGCAGACCCAGA...GAGCATCATGCACTTACATCTCTGAGAGGGCATCATCCACACAGCTGCATTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | GGAAATGCAGCTGTGTGGATGATGCCCTCTCAGAGATGTAAGTGCATGATGCTCTATCTCGACTCTCCATaGTTCAGTATGAAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GNAAVWMMPSQRCKCMMLYLDSP*FSMKKS Trigger: GGATTTCTTCATACTGAAGCATGGAGAGTCGAGATA...GAGCATCATGCACTTACATCTCTGAGAGGGCATCATCCACACAGCTGCATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | AACAATGCATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATATCTCGACTCTCCATaGTTCAGTATGAAGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NNASTGALLFSCLLCLSAYLDSP*FSMKKS Trigger: GGATTTCTTCATACTGAAGCATGGAGAGTCGAGATA...TGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATGCATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | TATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGCTGTGTCAAGTTCCTCTTTaGAACCTGGAACGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YISCLREVSVWLTVTQWLCQVPL*NLERRC Trigger: ACAGCGGCGTTCCAGGTTCCAAAGAGGAACTTGACA...CAGCCACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | TATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGCTGGTTCATAAGCTCCGATaGGAATGGCCGCAAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YISCLREVSVWLTVTQWLVHKLR*EWPQGQ Trigger: TTGACCTTGCGGCCATTCCCATCGGAGCTTATGAAC...CAGCCACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| 3UTR CAA 72 bp | TGCCCGGTTTTCCTCAAGCTGACTTTAAATGGAATCTaGTGCATTAGTGCCTCTGAGCCACATTCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CPVFLKLTLNGI*CISASEPHSLY Trigger: GTACAGTGAATGTGGCTCAGAGGCACTAATGCACAAGATTCCATTTAAAGTCAGCTTGAGGAAAACCGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | AACAATGCATCAACGGGAGCATTGCTCTTCAGCTGTCTACTGTGCCTGTCTGCAGATGTTTTTCCATGTTaGCCATGGGTTAACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NNASTGALLFSCLLCLSADVFPC*PWVNKS Trigger: AGATTTGTTAACCCATGGCCAACATGGAAAAACATC...TGCAGACAGGCACAGTAGACAGCTGAAGAGCAATGCTCCCGTTGATGCATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | TATCATTACATAAATATAAGAAAGGGGTGTGTGTGTGGTGTGTGTGTGGTGTGTAAGCTCCGATGGGAATaGCCGCAAGGTCAAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YHYINIRKGCVCGVCVVCKLRWE*PQGQKD Trigger: GTCCTTTTGACCTTGCGGCCATTCCCATCGGAGCTT...ACACACCACACACACACCACACACACACCCCTTTCTTATATTTATGTAATGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | TATCATTACATAAATATAAGAAAGGGGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTTCATAAGCTCCGATaGGAATGGCCGCAAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YHYINIRKGCVCGVCVVCVHKLR*EWPQGQ Trigger: TTGACCTTGCGGCCATTCCCATCGGAGCTTATGAAC...ACACACCACACACACACCACACACACACCCCTTTCTTATATTTATGTAATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | TATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGCTGTCTTCTGGGTCTGCATaGTGGTATTTCATAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: YISCLREVSVWLTVTQWLSSGSA*WYFINH Trigger: GTGGTTTATGAAATACCAGCATGCAGACCCAGAAGA...CAGCCACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | TATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGCTGTTTCATAAACCACCTTaGTTCATAAGCTCCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YISCLREVSVWLTVTQWLFHKPP*FISSDG Trigger: CCCATCGGAGCTTATGAACCAAGGTGGTTTATGAAA...CAGCCACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR GCA 90 bp | GAAAACCATTCAATAGGGTGGTTGTGTGAGAGAGATTTGGTGTACTTCACGAGTAGCATCTTCTGGGTCTaGATGCTGGTATTTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ENHSIGWLCERDLVYFTSSIFWV*MLVFHK Trigger: TTTATGAAATACCAGCATGCAGACCCAGAAGATGCT...ACTCGTGAAGTACACCAAATCTCTCTCACACAACCACCCTATTGAATGGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | TATCATTACATAAATATAAGAAAGGGGTGTGTGTGTGGTGTGTGTGTGGTGTGTCCTTACAGCATCTTCTaGGTCTGCATGCTGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: YHYINIRKGCVCGVCVVCPYSIF*VCMLVF Trigger: AAATACCAGCATGCAGACCCAGAAGATGCTGTAAGG...ACACACCACACACACACCACACACACACCCCTTTCTTATATTTATGTAATGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTATATCAGCTGCTTAAGAGAAGTTTCAGTGTGGCTTACAGTAACACAGTGGATGTTTTTCCATGTTaGCCATGGGTTAACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLYQLLKRSFSVAYSNTVDVFPC*PWVNKS Trigger: AGATTTGTTAACCCATGGCCAACATGGAAAAACATC...CACTGTGTTACTGTAAGCCACACTGAAACTTCTCTTAAGCAGCTGATATAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 90 bp | CTTATTGTACACGGCGGGCGGCGAAACCGCTTCGGACCCATGTACTaGGAGGGAGAGGCACGGGAGCTGAACATGGGGTCCGTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LIVHGGRRNRFGPMY*EGEARELNMGSVRK Trigger: CTTCCTCACGGACCCCATGTTCAGCTCCCGTGCCTCTCCCTCGCAGTACATGGGTCCGAAGCGGTTTCGCCGCCCGCCGTGTACAATAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 90 bp | GCATCCAGTCAAGAAGGCCCAAGGGCACAAACCACCGCAGCTCGCTaGCGAACCGCTCGTTCAACGCCAGGACCGAGCCGTAGTCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASSQEGPRAQTTAAR*RTARSTPGPSRSLG Trigger: ACCTAGACTACGGCTCGGTCCTGGCGTTGAACGAGCGGTTCGGCAGCGAGCTGCGGTGGTTTGTGCCCTTGGGCCTTCTTGACTGGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 90 bp | CCCCAGAGAACCTTGTTGTCGTCCAGGAGGGTCCTTTTGCACCAGTaGTGGGAAGGCGTGAAGACGAAGGTGACCTTGTCGTGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQRTLLSSRRVLLHQ*WEGVKTKVTLSWPG Trigger: CCCTGGCCACGACAAGGTCACCTTCGTCTTCACGCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGGACGACAACAAGGTTCTCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CCA 90 bp | TTGCACCAGTGCTGGGAAGGCGTGAAGACGAAGGTGACCTTGTCGTaGCCAGGGACGCAGTTCTCCTCCCACCAGTCCAGCTCAATCACG | + |
|
Preference number: 5 (lower is better) Translates to: LHQCWEGVKTKVTLS*PGTQFSSHQSSSIT Trigger: CGTGATTGAGCTGGACTGGTGGGAGGAGAACTGCGTCCCTGGCCACGACAAGGTCACCTTCGTCTTCACGCCTTCCCAGCACTGGTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 90 bp | CCCCAGCAAAGAAGAATCGACTCCAAGGCCCTAGCACGGACCAGCTaGCCCAGAGAACCTTGTTGTCGTCCAGGAGGGTCCTTTTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PQQRRIDSKALARTS*PREPCCRPGGSFCT Trigger: GGTGCAAAAGGACCCTCCTGGACGACAACAAGGTTCTCTGGGGCAGCTGGTCCGTGCTAGGGCCTTGGAGTCGATTCTTCTTTGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CCA 90 bp | CAGAGAACCTTGTTGTCGTCCAGGAGGGTCCTTTTGCACCAGTGCTaGGAAGGCGTGAAGACGAAGGTGACCTTGTCGTGGCCAGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: QRTLLSSRRVLLHQC*EGVKTKVTLSWPGT Trigger: CGTCCCTGGCCACGACAAGGTCACCTTCGTCTTCACGCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGGACGACAACAAGGTTCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 90 bp | TCCTCCCACCAGTCCAGCTCAATCACGTTCTCGCAGCCACATTTCTaGATCCAGTCAAGAAGGCCCAAGGGCACAAACCACCGCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSHQSSSITFSQPHF*IQSRRPKGTNHRSS Trigger: CGAGCTGCGGTGGTTTGTGCCCTTGGGCCTTCTTGACTGGATGCAGAAATGTGGCTGCGAGAACGTGATTGAGCTGGACTGGTGGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTGCCCATCAGCCTTGAACTCCAGGAGGGTCCTTTaGCACCAGTGCTGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VCPKSQTHSCLLCPSALNSRRVL*HQCWEG Trigger: GCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGGA...GTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTACAGAACAAACCTGTGAATGCAGAGGCGTACTGGGACAAAGCCTGGGCATCCAGGAGGGTCCTTTaGCACCAGTGCTGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KVQNKPVNAEAYWDKAWASRRVL*HQCWEG Trigger: GCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGGA...TGCCCAGGCTTTGTCCCAGTACGCCTCTGCATTCACAGGTTTGTTCTGTACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGCCCTAAGTCCCAAACCCACTCTTGCCTTCTCTGCCCATCAGCCTTGAACTTGTCAAGTTCCTCTTaGGAACCTGGAACGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCPKSQTHSCLLCPSALNLSSSS*EPGTPL Trigger: CAGCGGCGTTCCAGGTTCCAAAGAGGAACTTGACAA...GTTCAAGGCTGATGGGCAGAGAAGGCAAGAGTGGGTTTGGGACTTAGGGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CCA 90 bp | GCCAGCCTCTCTCACTCCAGCGTCTTCAGGGTCACTGACAAAATATaGCTTAAGCACCGGGAGCTCTTTGTCAAGTTCCTCTTTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: ASLSHSSVFRVTDKI*LKHRELFVKFLFGT Trigger: GGTTCCAAAGAGGAACTTGACAAAGAGCTCCCGGTGCTTAAGCCATATTTTGTCAGTGACCCTGAAGACGCTGGAGTGAGAGAGGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | GCTTATTCTTTGGAGTGCTGGACTGCAGGTGTGCATCACCACGACCAGCAGTTATTGTCAAGTTCCTCTTaGGAACCTGGAACGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYSLECWTAGVHHHDQQLLSSSS*EPGTPL Trigger: CAGCGGCGTTCCAGGTTCCAAAGAGGAACTTGACAA...TAACTGCTGGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS TCA 90 bp | GGGAGCTCTTTGTCAAGTTCCTCTTTGGAACCTGGAACGCCGCTGTaGTTCTTCTCCATTATCAGCCATCTGAGCACATTCGGGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSLSSSSLEPGTPL*FFSIISHLSTFGME Trigger: CTCCATCCCGAATGTGCTCAGATGGCTGATAATGGAGAAGAATCACAGCGGCGTTCCAGGTTCCAAAGAGGAACTTGACAAAGAGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS TCA 90 bp | TGGAACCTGGAACGCCGCTGTGATTCTTCTCCATTATCAGCCATCTaGGCACATTCGGGATGGAGATGTTTTTCCATGTTGGCCATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WNLERRCDSSPLSAI*AHSGWRCFSMLAMG Trigger: ACCCATGGCCAACATGGAAAAACATCTCCATCCCGAATGTGCTCAGATGGCTGATAATGGAGAAGAATCACAGCGGCGTTCCAGGTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | CCTTCTCTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATGCCTTCTCAGTGTTTCTTTaGGATACTGATAGCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSLPISLEPGKCSCVDDAFSVFL*DTDSLA Trigger: CGCCAAGCTATCAGTATCCAAAAGAAACACTGAGAA...GGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAGAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCCATCAGCCTTGAACCTGGGAAATGCAGCTGTGTGGATGATGCCCTCTCATCGCCACAGATCTCTTaGTTTGAAGGTCAATGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPISLEPGKCSCVDDALSSPQIS*FEGQCE Trigger: TTCACATTGACCTTCAAACAAAGAGATCTGTGGCGA...TGAGAGGGCATCATCCACACAGCTGCATTTCCCAGGTTCAAGGCTGATGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGCTTATTCTTTGGAGTGCTGGACTGCAGGTGTGCATCACCACGACCAGCATCGCCACAGATCTCTTaGTTTGAAGGTCAATGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VCLFFGVLDCRCASPRPASPQIS*FEGQCE Trigger: TTCACATTGACCTTCAAACAAAGAGATCTGTGGCGA...TGCTGGTCGTGGTGATGCACACCTGCAGTCCAGCACTCCAAAGAATAAGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTGATACCATAAGTTTTAGCACCGGGAGCTCTTaGTCAAGTTCCTCTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSSAVYCACLHQSDTISFSTGSS*SSSSLE Trigger: TTCCAAAGAGGAACTTGACAAAGAGCTCCCGGTGCT...AAAACTTATGGTATCACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCTTCAGCTGTCTACTGTGCCTGTCTGCATCAGAGTGATACCATAAGTTTTTTCTCAGTGTTTCTTTaGGATACTGATAGCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CSSAVYCACLHQSDTISFFSVFL*DTDSLA Trigger: CGCCAAGCTATCAGTATCCAAAAGAAACACTGAGAA...AAAACTTATGGTATCACTCTGATGCAGACAGGCACAGTAGACAGCTGAAGAGCA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 90 bp | CTTTGTTTGAAGGTCAATGTGAATCCTTACAGCATCTTCTGGGTCTaGATGCTGGTATTTCATAAACCACCTTGGTTCATAAGCTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LCLKVNVNPYSIFWV*MLVFHKPPWFISSD Trigger: ATCGGAGCTTATGAACCAAGGTGGTTTATGAAATACCAGCATGCAGACCCAGAAGATGCTGTAAGGATTCACATTGACCTTCAAACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 72 bp | CACGGCGGGCGGCGAAACCGCTTCGGACCCATGTACTaGGAGGGAGAGGCACGGGAGCTGAACATGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HGGRRNRFGPMY*EGEARELNMGS Trigger: GGACCCCATGTTCAGCTCCCGTGCCTCTCCCTCGCAGTACATGGGTCCGAAGCGGTTTCGCCGCCCGCCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 72 bp | CAAGAAGGCCCAAGGGCACAAACCACCGCAGCTCGCTaGCGAACCGCTCGTTCAACGCCAGGACCGAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: QEGPRAQTTAAR*RTARSTPGPSR Trigger: ACGGCTCGGTCCTGGCGTTGAACGAGCGGTTCGGCAGCGAGCTGCGGTGGTTTGTGCCCTTGGGCCTTCTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CCA 72 bp | TGCTGGGAAGGCGTGAAGACGAAGGTGACCTTGTCGTaGCCAGGGACGCAGTTCTCCTCCCACCAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CWEGVKTKVTLS*PGTQFSSHQSS Trigger: GCTGGACTGGTGGGAGGAGAACTGCGTCCCTGGCCACGACAAGGTCACCTTCGTCTTCACGCCTTCCCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CAA 72 bp | CACCAGTGCTGGGAAGGCGTGAAGACGAAGGTGACCTaGTCGTGGCCAGGGACGCAGTTCTCCTCCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: HQCWEGVKTKVT*SWPGTQFSSHQ Trigger: CTGGTGGGAGGAGAACTGCGTCCCTGGCCACGACAAGGTCACCTTCGTCTTCACGCCTTCCCAGCACTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CAA 72 bp | GGCCCTAGCACGGACCAGCTGCCCCAGAGAACCTTGTaGTCGTCCAGGAGGGTCCTTTTGCACCAGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GPSTDQLPQRTL*SSRRVLLHQCW Trigger: CCAGCACTGGTGCAAAAGGACCCTCCTGGACGACAACAAGGTTCTCTGGGGCAGCTGGTCCGTGCTAGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CAA 72 bp | CAAGGCCCTAGCACGGACCAGCTGCCCCAGAGAACCTaGTTGTCGTCCAGGAGGGTCCTTTTGCACCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGPSTDQLPQRT*LSSRRVLLHQC Trigger: GCACTGGTGCAAAAGGACCCTCCTGGACGACAACAAGGTTCTCTGGGGCAGCTGGTCCGTGCTAGGGCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CAA 90 bp | GTCCTTTTGCACCAGTGCTGGGAAGGCGTGAAGACGAAGGTGACCTaGTCGTGGCCAGGGACGCAGTTCTCCTCCCACCAGTCCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VLLHQCWEGVKTKVT*SWPGTQFSSHQSSS Trigger: TGAGCTGGACTGGTGGGAGGAGAACTGCGTCCCTGGCCACGACAAGGTCACCTTCGTCTTCACGCCTTCCCAGCACTGGTGCAAAAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS GCA 72 bp | AGAAGAATCGACTCCAAGGCCCTAGCACGGACCAGCTaGCCCAGAGAACCTTGTTGTCGTCCAGGAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRIDSKALARTS*PREPCCRPGGS Trigger: GGACCCTCCTGGACGACAACAAGGTTCTCTGGGGCAGCTGGTCCGTGCTAGGGCCTTGGAGTCGATTCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
||
| CDS CAA 90 bp | GACCAGCTGCCCCAGAGAACCTTGTTGTCGTCCAGGAGGGTCCTTTaGCACCAGTGCTGGGAAGGCGTGAAGACGAAGGTGACCTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: DQLPQRTLLSSRRVL*HQCWEGVKTKVTLS Trigger: CGACAAGGTCACCTTCGTCTTCACGCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGGACGACAACAAGGTTCTCTGGGGCAGCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS TCA 72 bp | CCATTTCCACCATCAGCGTCGCATGTCCCAGCCACGTaGCTCGTAAGCCAGCCTCTCTCACTCCAGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: PFPPSASHVPAT*LVSQPLSLQRL Trigger: AAGACGCTGGAGTGAGAGAGGCTGGCTTACGAGTCACGTGGCTGGGACATGCGACGCTGATGGTGGAAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS CAA 72 bp | CCCCAGAGAACCTTGTTGTCGTCCAGGAGGGTCCTTTaGCACCAGTGCTGGGAAGGCGTGAAGACGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PQRTLLSSRRVL*HQCWEGVKTKV Trigger: CACCTTCGTCTTCACGCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGGACGACAACAAGGTTCTCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS GCA 72 bp | ACCTTGTTGTCGTCCAGGAGGGTCCTTTTGCACCAGTaGTGGGAAGGCGTGAAGACGAAGGTGACCTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: TLLSSRRVLLHQ*WEGVKTKVTLS Trigger: CGACAAGGTCACCTTCGTCTTCACGCCTTCCCAGCACTGGTGCAAAAGGACCCTCCTGGACGACAACAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS GCA 72 bp | CAGTCCAGCTCAATCACGTTCTCGCAGCCACATTTCTaGATCCAGTCAAGAAGGCCCAAGGGCACAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: QSSSITFSQPHF*IQSRRPKGTNH Trigger: GTGGTTTGTGCCCTTGGGCCTTCTTGACTGGATGCAGAAATGTGGCTGCGAGAACGTGATTGAGCTGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS CCA 72 bp | CACCGGGAGCTCTTTGTCAAGTTCCTCTTTGGAACCTaGAACGCCGCTGTGATTCTTCTCCATTATCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: HRELFVKFLFGT*NAAVILLHYQP Trigger: TGGCTGATAATGGAGAAGAATCACAGCGGCGTTCCAGGTTCCAAAGAGGAACTTGACAAAGAGCTCCCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS CCA 72 bp | TCTCACTCCAGCGTCTTCAGGGTCACTGACAAAATATaGCTTAAGCACCGGGAGCTCTTTGTCAAGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SHSSVFRVTDKI*LKHRELFVKFL Trigger: GAGGAACTTGACAAAGAGCTCCCGGTGCTTAAGCCATATTTTGTCAGTGACCCTGAAGACGCTGGAGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS CAA 72 bp | GGCGCTTTCTCAGTGTTTCTTTTGGATACTGATAGCTaGGCGCTGGAGACTGGCTGTCCTCATACTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: GAFSVFLLDTDS*ALETGCPHTHP Trigger: TGGATGAGTATGAGGACAGCCAGTCTCCAGCGCCAAGCTATCAGTATCCAAAAGAAACACTGAGAAAGCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS CCA 72 bp | GCGCTTTCTCAGTGTTTCTTTTGGATACTGATAGCTTaGCGCTGGAGACTGGCTGTCCTCATACTCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: ALSQCFFWILIA*RWRLAVLILIH Trigger: ATGGATGAGTATGAGGACAGCCAGTCTCCAGCGCCAAGCTATCAGTATCCAAAAGAAACACTGAGAAAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS TCA 72 bp | GAACGCCGCTGTGATTCTTCTCCATTATCAGCCATCTaGGCACATTCGGGATGGAGATGTTTTTCCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: ERRCDSSPLSAI*AHSGWRCFSML Trigger: CAACATGGAAAAACATCTCCATCCCGAATGTGCTCAGATGGCTGATAATGGAGAAGAATCACAGCGGCGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS GCA 72 bp | CTGGAGAACCTAGAAGACACACTTCCTCCTGAATTCTaGACTGAATTCTGGCGCTTTCTCAGTGTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LENLEDTLPPEF*TEFWRFLSVSF Trigger: AAAAGAAACACTGAGAAAGCGCCAGAATTCAGTGCAGAATTCAGGAGGAAGTGTGTCTTCTAGGTTCTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS CCA 72 bp | TCTGAGCACATTCGGGATGGAGATGTTTTTCCATGTTaGCCATGGGTTAACAAATCTCCCGTCTTTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SEHIRDGDVFPC*PWVNKSPVFSF Trigger: AAAGGAAAAGACGGGAGATTTGTTAACCCATGGCCAACATGGAAAAACATCTCCATCCCGAATGTGCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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| CDS GCA 72 bp | GCTCTATCATCGGTATTCAAGTATCTCGACTCTCCATaGTTCAGTATGAAGAAATCCTCACAAGAAAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: ALSSVFKYLDSP*FSMKKSSQESP Trigger: CGGACTTTCTTGTGAGGATTTCTTCATACTGAAGCATGGAGAGTCGAGATACTTGAATACCGATGATAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060899.9 ENSMUST00000115217.8 |
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