Pregenerated sensors for NAPB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027438Ensembl transcript IDs: ENSMUST00000028926.13, ENSMUST00000136513.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCGGCTTCCTGCATTTACACCCTGTTACCACCATGACAGGGGCCTaGCAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LGFLHLHPVTTMTGA*QTPTTCSHGASFCF Trigger: GAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCCCTGTCATGGTGGTAACAGGGTGTAAATGCAGGAAGCCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR GCA 90 bp | ACTGGTCACAGCTCACACTGTAGCAGGCAGGTCACGGGCATGCTGTaGTGCTGCCAGATTCTCCACAGTTACAGAGGTTTGAATTTGGAC | + |
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Preference number: 1 (lower is better) Translates to: TGHSSHCSRQVTGML*CCQILHSYRGLNLD Trigger: GTCCAAATTCAAACCTCTGTAACTGTGGAGAATCTGGCAGCAGCACAGCATGCCCGTGACCTGCCTGCTACAGTGTGAGCTGTGACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR GCA 90 bp | GGTCACAGCTCACACTGTAGCAGGCAGGTCACGGGCATGCTGTGCTaGTGCCAGATTCTCCACAGTTACAGAGGTTTGAATTTGGACATT | + |
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Preference number: 1 (lower is better) Translates to: GHSSHCSRQVTGMLC*CQILHSYRGLNLDI Trigger: AATGTCCAAATTCAAACCTCTGTAACTGTGGAGAATCTGGCAGCAGCACAGCATGCCCGTGACCTGCCTGCTACAGTGTGAGCTGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR CCA 90 bp | ATGCATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTaGTACCAGTGGAGGCAAAAAGAGGATGGTGGATCTCTTAGGACT | + |
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Preference number: 1 (lower is better) Translates to: MHVLSACMREHHMHA*YQWRQKEDGGSLRT Trigger: AGTCCTAAGAGATCCACCATCCTCTTTTTGCCTCCACTGGTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR GCA 90 bp | AGAGACCATGAAAGCCTAAAGCCTGGACATCTTGAGAGAATGCATTaGTCTGTGTCTGCGGGACATTTGAAGGGAGTAAGCTTGCATACT | + |
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Preference number: 1 (lower is better) Translates to: RDHESLKPGHLERMH*SVSAGHLKGVSLHT Trigger: AGTATGCAAGCTTACTCCCTTCAAATGTCCCGCAGACACAGAGCAATGCATTCTCTCAAGATGTCCAGGCTTTAGGCTTTCATGGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR CCA 90 bp | TTTGAGCCACCCAACATGGGTGCTAGAAATCAAACTTGGGTCCTCTaGAAGAGTAACCATCTCTCTAGCCCCCTTTTGCTACTTTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: FEPPNMGARNQTWVL*KSNHLSSPLLLLCF Trigger: GAAACAAAGTAGCAAAAGGGGGCTAGAGAGATGGTTACTCTTCCAGAGGACCCAAGTTTGATTTCTAGCACCCATGTTGGGTGGCTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR CCA 90 bp | CTTAGGACTGGAGTTATAGACAGCTGTGAGCCCCCATATAAATTCTaGGACTTTAACCCTGGGTCCTCTGAAAGAGCAAATGAGGCATCT | + |
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Preference number: 1 (lower is better) Translates to: LRTGVIDSCEPPYKF*DFNPGSSERANEAS Trigger: AGATGCCTCATTTGCTCTTTCAGAGGACCCAGGGTTAAAGTCCCAGAATTTATATGGGGGCTCACAGCTGTCTATAACTCCAGTCCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR CCA 90 bp | GCGGGACATTTGAAGGGAGTAAGCTTGCATACTCCTGTCCGGACATaGTCCTCATTCTTTTATCTTCTGCCAAAAGTGTGTTCTTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: AGHLKGVSLHTPVRT*SSFFYLLPKVCSLY Trigger: ATACAAAGAACACACTTTTGGCAGAAGATAAAAGAATGAGGACCATGTCCGGACAGGAGTATGCAAGCTTACTCCCTTCAAATGTCCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR TCA 90 bp | AGATTTATTGTTACACGATTTGTTTTTGTAATGGACTCCCTTGCCTaGGAGCAACTTAGGACTTTACAGTGCCTGCTTACTGGTCACAGC | + |
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Preference number: 1 (lower is better) Translates to: RFIVTRFVFVMDSLA*EQLRTLQCLLTGHS Trigger: GCTGTGACCAGTAAGCAGGCACTGTAAAGTCCTAAGTTGCTCTCAGGCAAGGGAGTCCATTACAAAAACAAATCGTGTAACAATAAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR GCA 90 bp | CCAGATTCTCCACAGTTACAGAGGTTTGAATTTGGACATTTTAAGTaGACAATACCAGAGGGAACAATAAATGCACAAGGGCTGGTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PDSPQLQRFEFGHFK*TIPEGTINAQGLVH Trigger: ATGCACCAGCCCTTGTGCATTTATTGTTCCCTCTGGTATTGTGCACTTAAAATGTCCAAATTCAAACCTCTGTAACTGTGGAGAATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACAGGGCCATCCAAAGATaGAAACACCATTCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FTRESRLASTSQQSSSLHRAIQR*KHHSRA Trigger: GGCCCTGGAATGGTGTTTTCATCTTTGGATGGCCCT...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACATCAGAAGACTGAACTaGGAGGCAGAGAACAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: FTRESRLASTSQQSSSLHIRRLN*EAENRG Trigger: GCCTCTGTTCTCTGCCTCCCAGTTCAGTCTTCTGAT...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTTGCTCAAGCTTGGCATaGCTGTGGCCCAGAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: GPDRHLPPVLMGPVSASFCSSLA*LWPRRQ Trigger: TTGTCTTCTGGGCCACAGTCATGCCAAGCTTGAGCA...AAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACCTTGGATGGACTTCTTaGTACGAAGCAACATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FTRESRLASTSQQSSSLHLGWTS*YEATWW Trigger: CCACCATGTTGCTTCGTATCAAGAAGTCCATCCAAG...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACTTTACAGTGCCTGCTTACTGGTCACAGCTCACACTGTAGCAGGCAGGTCGGCATGCTGTGCTGCTaGCAGATTCTCCACAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: RTLQCLLTGHSSHCSRQVGMLCC*QILHSY Trigger: GTAACTGTGGAGAATCTGGCAGCAGCACAGCATGCC...GACCTGCCTGCTACAGTGTGAGCTGTGACCAGTAAGCAGGCACTGTAAAGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACCCCCCATATAAATTCTaGGACTTTAACCCTGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: FTRESRLASTSQQSSSLHPPYKF*DFNPGS Trigger: GGACCCAGGGTTAAAGTCCCAGAATTTATATGGGGG...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAGCAAAGGGGACCCAGGGAGCAAGGTCATGTCTACAGTACTGTATCAGCCCTCCGATTCTCACATaGCACAGACATGGTGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: LSAKGTQGARSCLQYCISPPILT*HRHGEL Trigger: TAGCTCACCATGTCTGTGTCATGTGAGAATCGGAGG...GCTGATACAGTACTGTAGACATGACCTTGCTCCCTGGGTCCCCTTTGCTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAACTCTTCTCGTTTAGCCCTGGGCCTGGGCAAAGCTACTACTCTACTGCATTGCTCAAGCTTGGCATaGCTGTGGCCCAGAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: SNSSRLALGLGKATTLLHCSSLA*LWPRRQ Trigger: TTGTCTTCTGGGCCACAGTCATGCCAAGCTTGAGCA...ATGCAGTAGAGTAGTAGCTTTGCCCAGGCCCAGGGCTAAACGAGAAGAGTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAATTCCTGGGTTTACAGGTGGTTTTGAGCCACCCAACATGGGTGCTAGAGCACGCACATGCTTGTaGAAGGCAAAGGAGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: TGIPGFTGGFEPPNMGARARTCL*KAKEGT Trigger: AGTGCCCTCCTTTGCCTTCCACAAGCATGTGCGTGC...TCTAGCACCCATGTTGGGTGGCTCAAAACCACCTGTAAACCCAGGAATTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR CAA 90 bp | GATGTCAGCACTTCACTTGAGGTCTCCATCTCCTTCTCCATCCCCTaGGATGGACTTCTTGATACGAAGCAACATGGTGGTCAGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: DVSTSLEVSISFSIP*DGLLDTKQHGGQPL Trigger: CAGTGGCTGACCACCATGTTGCTTCGTATCAAGAAGTCCATCCAAGGGGATGGAGAAGGAGATGGAGACCTCAAGTGAAGTGCTGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACATTAACCATGGGCCCTaGAAATATCAAAAGAACGGG | + |
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Preference number: 2 (lower is better) Translates to: FTRESRLASTSQQSSSLHINHGP*KYQKNG Trigger: CCCGTTCTTTTGATATTTTCAGGGCCCATGGTTAAT...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACTTTACAGTGCCTGCTTACTGGTCACAGCTCACACTGTAGCAGGCAGGTCACCCTCAAATACAAGTaGGGCTCTTATCTAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: RTLQCLLTGHSSHCSRQVTLKYK*GSYLTR Trigger: CCTGGTTAGATAAGAGCCTCACTTGTATTTGAGGGT...GACCTGCCTGCTACAGTGTGAGCTGTGACCAGTAAGCAGGCACTGTAAAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACTTTACAGTGCCTGCTTACTGGTCACAGCTCACACTGTAGCAGGCAGGTCGATTACAAGTGTTCATaGTGCCTGGCCCAGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: RTLQCLLTGHSSHCSRQVDYKCS*CLAQHL Trigger: TAAATGCTGGGCCAGGCATCATGAACACTTGTAATC...GACCTGCCTGCTACAGTGTGAGCTGTGACCAGTAAGCAGGCACTGTAAAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCTGGGTTTACAGGTGGTTTTGTCAGCACTTCACTTaGGGTCTCCATCTCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: MLVEGKGGHWNSWVYRWFCQHFT*GLHLLL Trigger: GAGAAGGAGATGGAGACCTCAAGTGAAGTGCTGACA...AAACCACCTGTAAACCCAGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAACTCTTCTCGTTTAGCCCTGGGCCTGGGCAAAGCTACTACTCTACTGCATGCATCCAGATACCAATaGACAGGGTCTTTGCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: SNSSRLALGLGKATTLLHASRYQ*TGSLLS Trigger: GCTTAGCAAAGACCCTGTGCATTGGTATCTGGATGC...ATGCAGTAGAGTAGTAGCTTTGCCCAGGCCCAGGGCTAAACGAGAAGAGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | CTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTCCTTGGTTTAAGGCAAATATaGAGGGATTCCCACTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTDTYHLFSWGQFLLHFLGLRQI*RDSHSS Trigger: GCTGGAGTGGGAATCCCTTCATATTTGCCTTAAACC...AAGGAAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAACTCTTCTCGTTTAGCCCTGGGCCTGGGCAAAGCTACTACTCTACTGCATGCTCATACACGCAAATaGAATAAGTCACAGACCCTC | + |
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Preference number: 2 (lower is better) Translates to: SNSSRLALGLGKATTLLHAHTRK*NKSQTL Trigger: GAGGGTCTGTGACTTATTTCATTTGCGTGTATGAGC...ATGCAGTAGAGTAGTAGCTTTGCCCAGGCCCAGGGCTAAACGAGAAGAGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTCCTTTTATCTGCACGCACATaGTTGTGGAAGGCAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LTDTYHLFSWGQFLLHFLLSART*LWKAKE Trigger: CTCCTTTGCCTTCCACAAGCATGTGCGTGCAGATAA...AAGGAAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAATTCCTGGGTTTACAGGTGGTTTTGAGCCACCCAACATGGGTGCTAGATACCACCTGTTCTCATaGGGCCAGTTTCTGCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: TGIPGFTGGFEPPNMGARYHLFS*GQFLLH Trigger: ATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTA...TCTAGCACCCATGTTGGGTGGCTCAAAACCACCTGTAAACCCAGGAATTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACTGCAACTTTTACCTTTaGTATAGCCAGCTATCATAC | + |
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Preference number: 2 (lower is better) Translates to: FTRESRLASTSQQSSSLHCNFYL*YSQLSY Trigger: GTATGATAGCTGGCTATACCAAAGGTAAAAGTTGCA...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | CTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTCCTTCATCACATGCATGCCTaGTACCAGTGGAGGCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LTDTYHLFSWGQFLLHFLHHMHA*YQWRQK Trigger: TTTTTGCCTCCACTGGTACCAGGCATGCATGTGATG...AAGGAAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTTCTATAAAACTGGGTTaGGGACCAGAGTTCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GPDRHLPPVLMGPVSASFSIKLG*GPEFKK Trigger: TTTCTTGAACTCTGGTCCTCAACCCAGTTTTATAGA...AAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | GATACTGCGGGATTACAAGTGTTCATGATGCCTGGCCCAGCATTTAACTTCAGGGGTTTAAGGCAAATATaGAGGGATTCCCACTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: DTAGLQVFMMPGPAFNFRGLRQI*RDSHSS Trigger: GCTGGAGTGGGAATCCCTTCATATTTGCCTTAAACC...CCTGAAGTTAAATGCTGGGCCAGGCATCATGAACACTTGTAATCCCGCAGTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAACTCTTCTCGTTTAGCCCTGGGCCTGGGCAAAGCTACTACTCTACTGCATACCATGTCCGACAAATaGACATCACCACACATATTC | + |
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Preference number: 2 (lower is better) Translates to: SNSSRLALGLGKATTLLHTMSDK*TSPHIF Trigger: GAATATGTGTGGTGATGTCCATTTGTCGGACATGGT...ATGCAGTAGAGTAGTAGCTTTGCCCAGGCCCAGGGCTAAACGAGAAGAGTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAATTCCTGGGTTTACAGGTGGTTTTGAGCCACCCAACATGGGTGCTAGAAAACCCCTAAAGGCATaGAAGGAAAAAGGAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: TGIPGFTGGFEPPNMGARKPLKA*KEKGAL Trigger: GAGAGCTCCTTTTTCCTTCCATGCCTTTAGGGGTTT...TCTAGCACCCATGTTGGGTGGCTCAAAACCACCTGTAAACCCAGGAATTCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCCTCTGGAAGAGTAACCATCTCTCTAGCCCCCTTTTGCTACTTTGTTTCGCTCATAGATCTCGATaGCTTTCTGGTACTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: WVLWKSNHLSSPLLLLCFAHRSR*LSGTAP Trigger: TGGAGCAGTACCAGAAAGCCATCGAGATCTATGAGC...GAAACAAAGTAGCAAAAGGGGGCTAGAGAGATGGTTACTCTTCCAGAGGACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | TGTATGCATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACATGGTGGTCAGCCACTaGTCCAAACGTGATATTGAG | + |
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Preference number: 2 (lower is better) Translates to: CMHVLSACMREHHMHAWYMVVSH*SKRDIE Trigger: CTCAATATCACGTTTGGATCAGTGGCTGACCACCAT...GTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATGCATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCTGGGTTTACAGGTGGTTTTCTGGAGTCCGTAAATaGTGGAAACATTTCCTCGTA | + |
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Preference number: 2 (lower is better) Translates to: MLVEGKGGHWNSWVYRWFSGVRK*WKHFLV Trigger: TACGAGGAAATGTTTCCAGCATTTACGGACTCCAGA...AAACCACCTGTAAACCCAGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTGGCATGACTGTGGCCCAGAAGACAATGTGAGGAGCATATATGGATGTGTGTCTATAAAACTGGGTTaGGGACCAGAGTTCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: AWHDCGPEDNVRSIYGCVSIKLG*GPEFKK Trigger: TTTCTTGAACTCTGGTCCTCAACCCAGTTTTATAGA...CACACATCCATATATGCTCCTCACATTGTCTTCTGGGCCACAGTCATGCCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCCTCTGGAAGAGTAACCATCTCTCTAGCCCCCTTTTGCTACTTTGTTTCGCATATATGGATGTGTaGATAAAGGAGATGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: WVLWKSNHLSSPLLLLCFAYMDV*IKEMPA Trigger: AGCTGGCATCTCCTTTATTCACACATCCATATATGC...GAAACAAAGTAGCAAAAGGGGGCTAGAGAGATGGTTACTCTTCCAGAGGACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGGGATTCCCACTCCAGCTAAAAGTGGAAACAGTCTCTAGAGAAAGGGAATACGAAGCAACATGGTaGTCAGCCACTGATCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: MKGFPLQLKVETVSREREYEATW*SATDPN Trigger: GTTTGGATCAGTGGCTGACCACCATGTTGCTTCGTA...TTCCCTTTCTCTAGAGACTGTTTCCACTTTTAGCTGGAGTGGGAATCCCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACCAGTGGCAAAATAAAAAGGAATaGGCTGCATGCCACAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: HVLSACMREHHMHAWYQWQNKKE*AACHKD Trigger: ATCTTTGTGGCATGCAGCTCATTCCTTTTTATTTTG...CCACTGGTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAGTATCAACAAGGTTCCATTGCAACTTTTACCTTTGGTATAGCCAGCTACCTCCGATTCTCACATaGCACAGACATGGTGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: QAVSTRFHCNFYLWYSQLPPILT*HRHGEL Trigger: TAGCTCACCATGTCTGTGTCATGTGAGAATCGGAGG...TAGCTGGCTATACCAAAGGTAAAAGTTGCAATGGAACCTTGTTGATACTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTCCTTTGTCAGTGTTTGTCATaGACATGTGAGCATATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LTDTYHLFSWGQFLLHFLCQCLS*TCEHIL Trigger: CAAAATATGCTCACATGTGCATGACAAACACTGACA...AAGGAAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTATGTAAACCAAATAGGACATCAGAGCTCATACACGCAAATGAAATAAGTGTACTGCTCCAGCTGTaGAGCGTAGGCTGCCACCTT | + |
|
Preference number: 2 (lower is better) Translates to: VLCKPNRTSELIHANEISVLLQL*SVGCHL Trigger: AAGGTGGCAGCCTACGCTGCACAGCTGGAGCAGTAC...ACTTATTTCATTTGCGTGTATGAGCTCTGATGTCCTATTTGGTTTACATAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGAATTCCTGGGTTTACAGGTGGTTTTGAGCCACCCAACATGGGTGCTAGATGCAACTTTTACCTTTaGTATAGCCAGCTATCATAC | + |
|
Preference number: 2 (lower is better) Translates to: TGIPGFTGGFEPPNMGARCNFYL*YSQLSY Trigger: GTATGATAGCTGGCTATACCAAAGGTAAAAGTTGCA...TCTAGCACCCATGTTGGGTGGCTCAAAACCACCTGTAAACCCAGGAATTCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAGGGATTCCCACTCCAGCTAAAAGTGGAAACAGTCTCTAGAGAAAGGGAAGCATATATGGATGTGTaGATAAAGGAGATGCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: MKGFPLQLKVETVSREREAYMDV*IKEMPA Trigger: AGCTGGCATCTCCTTTATTCACACATCCATATATGC...TTCCCTTTCTCTAGAGACTGTTTCCACTTTTAGCTGGAGTGGGAATCCCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTTCCATTGCAACTTTTACCTTTGGTATAGCCAGCTATCATACAGAAACCCCTGCTCATACACGCAAATaGAATAAGTCACAGACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GSIATFTFGIASYHTETPAHTRK*NKSQTL Trigger: GAGGGTCTGTGACTTATTTCATTTGCGTGTATGAGC...AGGGGTTTCTGTATGATAGCTGGCTATACCAAAGGTAAAAGTTGCAATGGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTATGTAAACCAAATAGGACATCAGAGCTCATACACGCAAATGAAATAAGTGGCAGAGCGCGGCCTTaGAGAAGTAATCCTTTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: VLCKPNRTSELIHANEISGRARP*RSNPLH Trigger: GTGCAAAGGATTACTTCTTCAAGGCCGCGCTCTGCC...ACTTATTTCATTTGCGTGTATGAGCTCTGATGTCCTATTTGGTTTACATAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR CAA 90 bp | GTCACTTGTATAAAGGTTGCATCCAGATACCAATGCACAGGGTCTTaGCTAAGCATCTATAAAACTGGGTTGAGGACCAGAGTTCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VTCIKVASRYQCTGS*LSIYKTGLRTRVQE Trigger: TTCTTGAACTCTGGTCCTCAACCCAGTTTTATAGATGCTTAGCAAAGACCCTGTGCATTGGTATCTGGATGCAACCTTTATACAAGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTAGATACTGCGGGATTACAAGTGTTCATGATGCCTGGCCCAGCATTTAACAACGGGAAAAAGATTTaGCAGTACTTCTCAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LVDTAGLQVFMMPGPAFNNGKKI*QYFSEN Trigger: GTTTTCTGAGAAGTACTGCCAAATCTTTTTCCCGTT...GTTAAATGCTGGGCCAGGCATCATGAACACTTGTAATCCCGCAGTATCTACAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR TCA 90 bp | GCATATACTTTGGTTATAGTGACACCATCACACATGGTTACAACTGTGCAAAAAGCCCAGAAGACAATGTaGGGAGCATATATGGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: AYTLVIVTPSHMVTTVQKAQKTM*GAYMDV Trigger: CACATCCATATATGCTCCTCACATTGTCTTCTGGGC...TTTTTGCACAGTTGTAACCATGTGTGATGGTGTCACTATAACCAAAGTATATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTGTCAGTGTTTGTCATGCACATGTGAGCATATTTTGCAAAACAAGAAACATCGCATCCAGATACCAATaGACAGGGTCTTTGCTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VVSVCHAHVSIFCKTRNIASRYQ*TGSLLS Trigger: GCTTAGCAAAGACCCTGTGCATTGGTATCTGGATGC...GATGTTTCTTGTTTTGCAAAATATGCTCACATGTGCATGACAAACACTGACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTCCATCTCACAGGTTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACACATATTCAGCTaGAATTTTCTGTCCAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: NSISQVLCVCVCVCVCVCPHIFS*NFLSNS Trigger: AGAGTTGGACAGAAAATTCCAGCTGAATATGTGTGG...ACACACACACACACACACACACACACACACACATAAAACCTGTGAGATGGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTATGTAAACCAAATAGGACATCAGAGCTCATACACGCAAATGAAATAAGTATCTCGATGGCTTTCTaGTACTGCTCCAGCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VLCKPNRTSELIHANEISISMAF*YCSSCA Trigger: TGCACAGCTGGAGCAGTACCAGAAAGCCATCGAGAT...ACTTATTTCATTTGCGTGTATGAGCTCTGATGTCCTATTTGGTTTACATAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR CAA 90 bp | TACCAGCTTCAAGTGATGTTAGCAGATCCTAGCTGTTGTCAGTGTTaGTCATGCACATGTGAGCATATTTTGCAAAACAAGAAACATCAC | + |
|
Preference number: 2 (lower is better) Translates to: YQLQVMLADPSCCQC*SCTCEHILQNKKHH Trigger: GTGATGTTTCTTGTTTTGCAAAATATGCTCACATGTGCATGACAAACACTGACAACAGCTAGGATCTGCTAACATCACTTGAAGCTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CAA 90 bp | AATACCAGAGGGAACAATAAATGCACAAGGGCTGGTGCATATACTTaGGTTATAGTGACACCATCACACATGGTTACAACTGTGCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: NTRGNNKCTRAGAYT*VIVTPSHMVTTVQK Trigger: TTTTTGCACAGTTGTAACCATGTGTGATGGTGTCACTATAACCAAAGTATATGCACCAGCCCTTGTGCATTTATTGTTCCCTCTGGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAAGTCACTTGTATAAAGGTTGCATCCAGATACCAATGCACAGGGTCTTTGCTAACGGGAAAAAGATTTaGCAGTACTTCTCAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSHLYKGCIQIPMHRVFANGKKI*QYFSEN Trigger: GTTTTCTGAGAAGTACTGCCAAATCTTTTTCCCGTT...AGCAAAGACCCTGTGCATTGGTATCTGGATGCAACCTTTATACAAGTGACTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGAACTATAACAATCGTTGCGTTTTGGTCACAATATTCTAGAGACCATGAAACCCTCAAATACAAGTaGGGCTCTTATCTAACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: MRTITIVAFWSQYSRDHETLKYK*GSYLTR Trigger: CCTGGTTAGATAAGAGCCTCACTTGTATTTGAGGGT...TTCATGGTCTCTAGAATATTGTGACCAAAACGCAACGATTGTTATAGTTCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATATACTTTGGTTATAGTGACACCATCACACATGGTTACAACTGTGCAAAAACTGTATGTGTTTATCTaGACGCACATGCTTGTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: AYTLVIVTPSHMVTTVQKLYVFI*THMLVE Trigger: TTCCACAAGCATGTGCGTGCAGATAAACACATACAG...TTTTTGCACAGTTGTAACCATGTGTGATGGTGTCACTATAACCAAAGTATATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CAA 90 bp | CTGAATTACAAACTTATTCCTAATAAGCACCCTAAACTAAGTCACTaGTATAAAGGTTGCATCCAGATACCAATGCACAGGGTCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LNYKLIPNKHPKLSH*YKGCIQIPMHRVFA Trigger: AGCAAAGACCCTGTGCATTGGTATCTGGATGCAACCTTTATACAAGTGACTTAGTTTAGGGTGCTTATTAGGAATAAGTTTGTAATTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTAAAACAAAACCAAGGAAATCTACCTTGACATCCATCCAAACAAACAGGACCCAAAATAAAAAGGAATaGGCTGCATGCCACAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VKTKPRKSTLTSIQTNRTQNKKE*AACHKD Trigger: ATCTTTGTGGCATGCAGCTCATTCCTTTTTATTTTG...GGTCCTGTTTGTTTGGATGGATGTCAAGGTAGATTTCCTTGGTTTTGTTTTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATATACTTTGGTTATAGTGACACCATCACACATGGTTACAACTGTGCAAAAATCACCTTGTAGATACTaGGGGATTACAAGTGTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: AYTLVIVTPSHMVTTVQKSPCRY*GITSVH Trigger: ATGAACACTTGTAATCCCGCAGTATCTACAAGGTGA...TTTTTGCACAGTTGTAACCATGTGTGATGGTGTCACTATAACCAAAGTATATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATATACTTTGGTTATAGTGACACCATCACACATGGTTACAACTGTGCAAAAAGAAGAAGTAATCCTTTaGACTGTACTTCAACAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AYTLVIVTPSHMVTTVQKEEVIL*TVLQQG Trigger: CCCTTGTTGAAGTACAGTGCAAAGGATTACTTCTTC...TTTTTGCACAGTTGTAACCATGTGTGATGGTGTCACTATAACCAAAGTATATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACAAACTCTTATGCTACACTGATAACATTTAACCACCATGTCCGACAAATGCCACACATATTCAGCTaGAATTTTCTGTCCAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: NTNSYATLITFNHHVRQMPHIFS*NFLSNS Trigger: AGAGTTGGACAGAAAATTCCAGCTGAATATGTGTGG...CATTTGTCGGACATGGTGGTTAAATGTTATCAGTGTAGCATAAGAGTTTGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | CTTAGGCTGGCCTGGAATTCACTAGGGAGTCCAGGCTaGCCTCAACCTCACAGCAATCCTCCTCCCTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: LRLAWNSLGSPG*PQPHSNPPPFT Trigger: GGTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAATTCCAGGCCAGCCTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR TCA 72 bp | CTGCATTTACACCCTGTTACCACCATGACAGGGGCCTaGCAGACACCTACCACCTGTTCTCATGGGGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LHLHPVTTMTGA*QTPTTCSHGAS Trigger: ACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCCCTGTCATGGTGGTAACAGGGTGTAAATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR TCA 72 bp | CTCTCGGCTTCCTGCATTTACACCCTGTTACCACCATaGCAGGGGCCTGACAGACACCTACCACCTGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSASCIYTLLPP*QGPDRHLPPVL Trigger: GAGAACAGGTGGTAGGTGTCTGTCAGGCCCCTGTCATGGTGGTAACAGGGTGTAAATGCAGGAAGCCGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACCCTTGGATGGACTTCTaGATACGAAGCAACATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: FTRESRLASTSQQSSSLHPWMDF*IRSNMV Trigger: CACCATGTTGCTTCGTATCAAGAAGTCCATCCAAGG...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR GCA 72 bp | CTCACAGCAATCCTCCTCCCTTCACCTTGTAGATACTaGGGGATTACAAGTGTTCATGATGCCTGGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTAILLPSPCRY*GITSVHDAWPS Trigger: GCTGGGCCAGGCATCATGAACACTTGTAATCCCGCAGTATCTACAAGGTGAAGGGAGGAGGATTGCTGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCAGCAAAGGGGACCCAGGGAGCAAGGTCATGTCTACAGTACTGTATCAGCTCTCCAGAGCAAGCTTaGCGTTCAGCTCATCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: LSAKGTQGARSCLQYCISSPEQA*RSAHPL Trigger: TAGTGGATGAGCTGAACGCAAAGCTTGCTCTGGAGA...GCTGATACAGTACTGTAGACATGACCTTGCTCCCTGGGTCCCCTTTGCTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTAGATACTGCGGGATTACAAGTGTTCATGATGCCTGGCCCAGCATTTAACTCTGCACGCACATGCTaGTGGAAGGCAAAGGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVDTAGLQVFMMPGPAFNSARTC*WKAKEG Trigger: GCCCTCCTTTGCCTTCCACAAGCATGTGCGTGCAGA...GTTAAATGCTGGGCCAGGCATCATGAACACTTGTAATCCCGCAGTATCTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | GGTCTCACTTTAAATGGTCGCATCAGAAGACTGAACTaGGAGGCAGAGAACAGAGGCTGGCCAGTGTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GLTLNGRIRRLN*EAENRGWPVFR Trigger: TCTGAACACTGGCCAGCCTCTGTTCTCTGCCTCCCAGTTCAGTCTTCTGATGCGACCATTTAAAGTGAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | TTTGAGCCACCCAACATGGGTGCTAGAAATCAAACTTaGGTCCTCTGGAAGAGTAACCATCTCTCTAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: FEPPNMGARNQT*VLWKSNHLSSP Trigger: GGGGCTAGAGAGATGGTTACTCTTCCAGAGGACCCAAGTTTGATTTCTAGCACCCATGTTGGGTGGCTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | TGTATGCGTGAGCATCACATGCATGCCTGGTACCAGTaGAGGCAAAAAGAGGATGGTGGATCTCTTAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: CMREHHMHAWYQ*RQKEDGGSLRT Trigger: AGTCCTAAGAGATCCACCATCCTCTTTTTGCCTCCACTGGTACCAGGCATGCATGTGATGCTCACGCATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | TTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTaGTACCAGTGGAGGCAAAAAGAGGATGGTGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: LSACMREHHMHA*YQWRQKEDGGS Trigger: AGATCCACCATCCTCTTTTTGCCTCCACTGGTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | AGAGCCATTTCCATACCTCATTTCCAAGGCTGCCTGTaGCTGGCCGTGAACAAAGCAGTAACTCTCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RAISIPHFQGCL*LAVNKAVTLFP Trigger: AGGAAAGAGAGTTACTGCTTTGTTCACGGCCAGCCACAGGCAGCCTTGGAAATGAGGTATGGAAATGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTCTCTCTAGCCCCCTTTaGCTACTTTGTTTCACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GPDRHLPPVLMGPVSASFLSSPL*LLCFTF Trigger: AAAAGTGAAACAAAGTAGCAAAAGGGGGCTAGAGAG...AAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCTGGGTTTACAGGTGGTTTATGTCAGCACTTCACTaGAGGTCTCCATCTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MLVEGKGGHWNSWVYRWFMSALH*RSPSPS Trigger: AGAAGGAGATGGAGACCTCAAGTGAAGTGCTGACAT...AAACCACCTGTAAACCCAGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR GCA 72 bp | TGCATGTTTTGTCTGCATGTATGCGTGAGCATCACATaGATGCCTGGTACCAGTGGAGGCAAAAAGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: CMFCLHVCVSIT*MPGTSGGKKRM Trigger: CATCCTCTTTTTGCCTCCACTGGTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR GCA 72 bp | GAAAGCCTAAAGCCTGGACATCTTGAGAGAATGCATTaGTCTGTGTCTGCGGGACATTTGAAGGGAGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ESLKPGHLERMH*SVSAGHLKGVS Trigger: GCTTACTCCCTTCAAATGTCCCGCAGACACAGAGCAATGCATTCTCTCAAGATGTCCAGGCTTTAGGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR GCA 72 bp | TGCACTGTACTTCAACAAGGGGTTATCCATGGTGTTTaGTCCCACCTGCTCATAGATCTCGATGGCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CTVLQQGVIHGV*SHLLIDLDGFL Trigger: CAGAAAGCCATCGAGATCTATGAGCAGGTGGGAGCAAACACCATGGATAACCCCTTGTTGAAGTACAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | CCCAACATGGGTGCTAGAAATCAAACTTGGGTCCTCTaGAAGAGTAACCATCTCTCTAGCCCCCTTTTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PNMGARNQTWVL*KSNHLSSPLLL Trigger: TAGCAAAAGGGGGCTAGAGAGATGGTTACTCTTCCAGAGGACCCAAGTTTGATTTCTAGCACCCATGTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGAATTCCTGGGTTTACAGGTGGTTTTGAGCCACCCAACATGGGTGCTAGACCAAGGAAATCTACCTaGACATCCATCCAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TGIPGFTGGFEPPNMGARPRKST*TSIQTN Trigger: GTTTGTTTGGATGGATGTCAAGGTAGATTTCCTTGG...TCTAGCACCCATGTTGGGTGGCTCAAAACCACCTGTAAACCCAGGAATTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATATACTTTGGTTATAGTGACACCATCACACATGGTTACAACTGTGCAAAAAGGAATCACGTTCCTCTaGCCTCAGCCTCCCAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AYTLVIVTPSHMVTTVQKGITFL*PQPPKC Trigger: GCACTTGGGAGGCTGAGGCAAGAGGAACGTGATTCC...TTTTTGCACAGTTGTAACCATGTGTGATGGTGTCACTATAACCAAAGTATATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCATCTCACAGGTTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGCAGACACTTGTaGGCAGAGCTGTTAGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: IPSHRFYVCVCVCVCVCVFSRHL*AELLDS Trigger: GGAATCTAACAGCTCTGCCAACAAGTGTCTGCTGAA...CACACACACACACACACACACACACACACACACATAAAACCTGTGAGATGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR TCA 72 bp | GTTTCATTGTCACATGATAGCAGCACAATAGGGCAATaGGACAGGCCTAGTAACACAGGCTCTTCAAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VSLSHDSSTIGQ*DRPSNTGSSST Trigger: TGTGCTTGAAGAGCCTGTGTTACTAGGCCTGTCTCATTGCCCTATTGTGCTGCTATCATGTGACAATGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR GCA 72 bp | ATTTCATTTGCCTGTATGTGTTTATCTGCACGCACATaGTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ISFACMCLSART*LWKAKEGTGIP Trigger: AGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCATGTGCGTGCAGATAAACACATACAGGCAAATGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTCCTCTGGAAGAGTAACCATCTCTCTAGCCCCCTTTTGCTACTTTGTTTCCAATGCACAGGGTCTTaGCTAAGCATCTATAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: WVLWKSNHLSSPLLLLCFQCTGS*LSIYKT Trigger: AGTTTTATAGATGCTTAGCAAAGACCCTGTGCATTG...GAAACAAAGTAGCAAAAGGGGGCTAGAGAGATGGTTACTCTTCCAGAGGACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGCATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACCTCTCTAGCCCCCTTTaGCTACTTTGTTTCACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CMHVLSACMREHHMHAWYLSSPL*LLCFTF Trigger: AAAAGTGAAACAAAGTAGCAAAAGGGGGCTAGAGAG...GTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATGCATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTCCTTATCAACAAGGTTCCATaGCAACTTTTACCTTTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LTDTYHLFSWGQFLLHFLINKVP*QLLPLV Trigger: TACCAAAGGTAAAAGTTGCAATGGAACCTTGTTGAT...AAGGAAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR TCA 72 bp | GACTTCTTGATACGAAGCAACATGGTGGTCAGCCACTaGTCCAAACGTGATATTGAGTCAAACTCCTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: DFLIRSNMVVSH*SKRDIESNSFT Trigger: AGTGAAGGAGTTTGACTCAATATCACGTTTGGATCAGTGGCTGACCACCATGTTGCTTCGTATCAAGAAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| 3UTR GCA 72 bp | ATATGTGTAGATTTCATTTGCCTGTATGTGTTTATCTaGACGCACATGCTTGTGGAAGGCAAAGGAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ICVDFICLYVFI*THMLVEGKGGH Trigger: GTGCCCTCCTTTGCCTTCCACAAGCATGTGCGTGCAGATAAACACATACAGGCAAATGAAATCTACACATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | ATGTCCGACAAATGGACATCACCACACATATTCAGCTaGAATTTTCTGTCCAACTCTGCTCAAGCTTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: MSDKWTSPHIFS*NFLSNSAQAWH Trigger: ATGCCAAGCTTGAGCAGAGTTGGACAGAAAATTCCAGCTGAATATGTGTGGTGATGTCCATTTGTCGGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGCATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACCCTAAACTAAGTCACTaGTATAAAGGTTGCATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CMHVLSACMREHHMHAWYPKLSH*YKGCIQ Trigger: CTGGATGCAACCTTTATACAAGTGACTTAGTTTAGG...GTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATGCATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCATTGCAACTTTTACCTTTGGTATAGCCAGCTATCATACAGAAACCCCTAGCTGTTGTCAGTGTTaGTCATGCACATGTGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GSIATFTFGIASYHTETPSCCQC*SCTCEH Trigger: ATGCTCACATGTGCATGACAAACACTGACAACAGCT...AGGGGTTTCTGTATGATAGCTGGCTATACCAAAGGTAAAAGTTGCAATGGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR TCA 72 bp | ATAGAAGCCTCCGATTCTCACATGACACAGACATGGTaGGCTAAAACAATACATAAACTGTGTGGCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: IEASDSHMTQTW*AKTIHKLCGWL Trigger: AAGCCAGCCACACAGTTTATGTATTGTTTTAGCTCACCATGTCTGTGTCATGTGAGAATCGGAGGCTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCAGTATCAACAAGGTTCCATTGCAACTTTTACCTTTGGTATAGCCAGCTAAGCTGTTGTCAGTGTTaGTCATGCACATGTGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QAVSTRFHCNFYLWYSQLSCCQC*SCTCEH Trigger: ATGCTCACATGTGCATGACAAACACTGACAACAGCT...TAGCTGGCTATACCAAAGGTAAAAGTTGCAATGGAACCTTGTTGATACTGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCCATTGCAACTTTTACCTTTGGTATAGCCAGCTATCATACAGAAACCCCTCAATGCACAGGGTCTTaGCTAAGCATCTATAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: GSIATFTFGIASYHTETPQCTGS*LSIYKT Trigger: AGTTTTATAGATGCTTAGCAAAGACCCTGTGCATTG...AGGGGTTTCTGTATGATAGCTGGCTATACCAAAGGTAAAAGTTGCAATGGAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTAAAACAAAACCAAGGAAATCTACCTTGACATCCATCCAAACAAACAGGACCATCTATAAAACTGGGTaGAGGACCAGAGTTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VKTKPRKSTLTSIQTNRTIYKTG*RTRVQE Trigger: TTCTTGAACTCTGGTCCTCAACCCAGTTTTATAGAT...GGTCCTGTTTGTTTGGATGGATGTCAAGGTAGATTTCCTTGGTTTTGTTTTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGAACTATAACAATCGTTGCGTTTTGGTCACAATATTCTAGAGACCATGAACCAAGGAAATCTACCTaGACATCCATCCAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: MRTITIVAFWSQYSRDHEPRKST*TSIQTN Trigger: GTTTGTTTGGATGGATGTCAAGGTAGATTTCCTTGG...TTCATGGTCTCTAGAATATTGTGACCAAAACGCAACGATTGTTATAGTTCTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR GCA 72 bp | ATGTTAGCAGATCCTAGCTGTTGTCAGTGTTTGTCATaGACATGTGAGCATATTTTGCAAAACAAGAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: MLADPSCCQCLS*TCEHILQNKKH Trigger: ATGTTTCTTGTTTTGCAAAATATGCTCACATGTGCATGACAAACACTGACAACAGCTAGGATCTGCTAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTATGTAAACCAAATAGGACATCAGAGCTCATACACGCAAATGAAATAAGTATCTATAAAACTGGGTaGAGGACCAGAGTTCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VLCKPNRTSELIHANEISIYKTG*RTRVQE Trigger: TTCTTGAACTCTGGTCCTCAACCCAGTTTTATAGAT...ACTTATTTCATTTGCGTGTATGAGCTCTGATGTCCTATTTGGTTTACATAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CCA 72 bp | CACTCAAATATGAGAACTATAACAATCGTTGCGTTTTaGTCACAATATTCTAGAGACCATGAAAGCCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HSNMRTITIVAF*SQYSRDHESLK Trigger: CTTTAGGCTTTCATGGTCTCTAGAATATTGTGACCAAAACGCAACGATTGTTATAGTTCTCATATTTGAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTGTACTGCTCCAGCTGTaGAGCGTAGGCTGCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPDRHLPPVLMGPVSASFVLLQL*SVGCHL Trigger: AAGGTGGCAGCCTACGCTGCACAGCTGGAGCAGTAC...AAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR CCA 90 bp | GCACATGCTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCTGGGTTTACAGGTGCCTCGGAGGAAAGAGTaGGAAGCCTTCACTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHACGRQRRALEFLGLQVPRRKE*EAFTRF Trigger: GAAGCGAGTGAAGGCTTCCCACTCTTTCCTCCGAGG...CACCTGTAAACCCAGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCATGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR CCA 90 bp | GATACTGCGGGATTACAAGTGTTCATGATGCCTGGCCCAGCATTTAACTTCAGGGCCTCCGCCATAAGCTaGACCGCTTCTCGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DTAGLQVFMMPGPAFNFRASAIS*TASRSF Trigger: GAAGGAGCGAGAAGCGGTCCAGCTTATGGCGGAGGC...CCTGAAGTTAAATGCTGGGCCAGGCATCATGAACACTTGTAATCCCGCAGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR CCA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACGCTGCATGTGGAGTTTaGCAGCTTGACAAAACGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTRESRLASTSQQSSSLHAACGV*QLDKTH Trigger: ATGCGTTTTGTCAAGCTGCCAAACTCCACATGCAGC...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR TCA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACAGTTCTTGGCCATCTTaGACATATTTGCAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTRESRLASTSQQSSSLHSSWPS*TYLQLW Trigger: CCAGAGCTGCAAATATGTTCAAGATGGCCAAGAACT...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR TCA 90 bp | CATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACCAGTGGGCTTGGCTGCGATTGTaGACCTCCCCATGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVLSACMREHHMHAWYQWAWLRL*TSPCLC Trigger: ACACAGACATGGGGAGGTTCACAATCGCAGCCAAGC...CCACTGGTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR CCA 90 bp | GCACATGCTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCTGGGTTTACAGGTGTCGGCAATGGTGATATaGTGCTTGGCTGCGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHACGRQRRALEFLGLQVSAMVI*CLAAIV Trigger: CACAATCGCAGCCAAGCACCATATCACCATTGCCGA...CACCTGTAAACCCAGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCATGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR CCA 90 bp | GCACATGCTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCTGGGTTTACAGGTGATCTCGATGGCTTTCTaGTACTGCTCCAGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHACGRQRRALEFLGLQVISMAF*YCSSCA Trigger: TGCACAGCTGGAGCAGTACCAGAAAGCCATCGAGAT...CACCTGTAAACCCAGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCATGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR GCA 90 bp | GGGCCTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTAGCCTCTTGAGGGTCTaGTTTCTTGTACGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPDRHLPPVLMGPVSASFSLLRV*FLVRIS Trigger: GGAAATGCGTACAAGAAAGCAGACCCTCAAGAGGCT...AAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR CCA 90 bp | GCACATGCTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCTGGGTTTACAGGTGGCTGCATGTGGAGTTTaGCAGCTTGACAAAACGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHACGRQRRALEFLGLQVAACGV*QLDKTH Trigger: ATGCGTTTTGTCAAGCTGCCAAACTCCACATGCAGC...CACCTGTAAACCCAGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTGCTCATAGATCTCGATaGCTTTCTGGTACTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPDRHLPPVLMGPVSASFAHRSR*LSGTAP Trigger: TGGAGCAGTACCAGAAAGCCATCGAGATCTATGAGC...AAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTAGATACTGCGGGATTACAAGTGTTCATGATGCCTGGCCCAGCATTTAACGGCAGAGCGCGGCCTTaGAGAAGTAATCCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVDTAGLQVFMMPGPAFNGRARP*RSNPLH Trigger: GTGCAAAGGATTACTTCTTCAAGGCCGCGCTCTGCC...GTTAAATGCTGGGCCAGGCATCATGAACACTTGTAATCCCGCAGTATCTACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR TCA 90 bp | TCCAACTCTTCTCGTTTAGCCCTGGGCCTGGGCAAAGCTACTACTCTACTGCATATGGTGGTCAGCCACTaGTCCAAACGTGATATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNSSRLALGLGKATTLLHMVVSH*SKRDIE Trigger: CTCAATATCACGTTTGGATCAGTGGCTGACCACCAT...ATGCAGTAGAGTAGTAGCTTTGCCCAGGCCCAGGGCTAAACGAGAAGAGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCTCTGGAAGAGTAACCATCTCTCTAGCCCCCTTTTGCTACTTTGTTTCCTGGTAGCAGAGTCATaGTTGCTCTGGAGCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: WVLWKSNHLSSPLLLLCFLVAES*LLWSCM Trigger: CATGCAGCTCCAGAGCAAGCATGACTCTGCTACCAG...GAAACAAAGTAGCAAAAGGGGGCTAGAGAGATGGTTACTCTTCCAGAGGACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGGCATGACTGTGGCCCAGAAGACAATGTGAGGAGCATATATGGATGTGTGGAGTCATGCTTGCTCTaGAGCTGCATGTGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AWHDCGPEDNVRSIYGCVESCLL*SCMWSL Trigger: CAAACTCCACATGCAGCTCCAGAGCAAGCATGACTC...CACACATCCATATATGCTCCTCACATTGTCTTCTGGGCCACAGTCATGCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR GCA 90 bp | GCTTGGCATGACTGTGGCCCAGAAGACAATGTGAGGAGCATATATGGATGTGTGGCAATGGTGATATGGTaGTTGGCTGCGATTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AWHDCGPEDNVRSIYGCVAMVIW*LAAIVN Trigger: GTTCACAATCGCAGCCAAGCACCATATCACCATTGC...CACACATCCATATATGCTCCTCACATTGTCTTCTGGGCCACAGTCATGCCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CAA 72 bp | AGGAGGGCACTGGAATTCCTGGGTTTACAGGTGGTTTaGAGCCACCCAACATGGGTGCTAGAAATCAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRALEFLGLQVV*SHPTWVLEIKL Trigger: AAGTTTGATTTCTAGCACCCATGTTGGGTGGCTCAAAACCACCTGTAAACCCAGGAATTCCAGTGCCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCTCTGGAAGAGTAACCATCTCTCTAGCCCCCTTTTGCTACTTTGTTTCGCAATGGTGATATGGTaGTTGGCTGCGATTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WVLWKSNHLSSPLLLLCFAMVIW*LAAIVN Trigger: GTTCACAATCGCAGCCAAGCACCATATCACCATTGC...GAAACAAAGTAGCAAAAGGGGGCTAGAGAGATGGTTACTCTTCCAGAGGACCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTCACTTGTATAAAGGTTGCATCCAGATACCAATGCACAGGGTCTTTGCTCTGGTAGCAGAGTCATaGTTGCTCTGGAGCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLYKGCIQIPMHRVFALVAES*LLWSCM Trigger: CATGCAGCTCCAGAGCAAGCATGACTCTGCTACCAG...AGCAAAGACCCTGTGCATTGGTATCTGGATGCAACCTTTATACAAGTGACTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| 3UTR CAA 72 bp | GCAACATGGTGGTCAGCCACTGATCCAAACGTGATATaGAGTCAAACTCCTTCACTGCTTCAGTGTACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATWWSATDPNVI*SQTPSLLQCTL Trigger: AAGCGTACACTGAAGCAGTGAAGGAGTTTGACTCAATATCACGTTTGGATCAGTGGCTGACCACCATGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGGATTCCCACTCCAGCTAAAAGTGGAAACAGTCTCTAGAGAAAGGGAACAGTTGATAGCCTCTTaGGGGTCTGCTTTCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MKGFPLQLKVETVSREREQLIAS*GSAFLY Trigger: GTACAAGAAAGCAGACCCTCAAGAGGCTATCAACTG...TTCCCTTTCTCTAGAGACTGTTTCCACTTTTAGCTGGAGTGGGAATCCCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR GCA 90 bp | GCACATGCTTGTGGAAGGCAAAGGAGGGCACTGGAATTCCTGGGTTTACAGGTGGGTATACATTTCACATaGCTCTTCTATTCTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHACGRQRRALEFLGLQVGIHFT*LFYSCV Trigger: AACACAAGAATAGAAGAGGCATGTGAAATGTATACC...CACCTGTAAACCCAGGAATTCCAGTGCCCTCCTTTGCCTTCCACAAGCATGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCTGACAGACACCTACCACCTGTTCTCATGGGGCCAGTTTCTGCTTCATTTCATCTTGAACATATTTaGAGCTCTGGTATACATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPDRHLPPVLMGPVSASFHLEHI*SSGIHF Trigger: GAAATGTATACCAGAGCTGCAAATATGTTCAAGATG...AAATGAAGCAGAAACTGGCCCCATGAGAACAGGTGGTAGGTGTCTGTCAGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR GCA 90 bp | CATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACCAGTGGGAAGAAGTAATCCTTTaGACTGTACTTCAACAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVLSACMREHHMHAWYQWEEVIL*TVLQQG Trigger: CCCTTGTTGAAGTACAGTGCAAAGGATTACTTCTTC...CCACTGGTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR GCA 90 bp | GGTTCCATTGCAACTTTTACCTTTGGTATAGCCAGCTATCATACAGAAACCCCTGATATGGTGCTTGGCTaGGATTGTGAACCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSIATFTFGIASYHTETPDMVLG*DCEPPL Trigger: AAGGGGAGGTTCACAATCGCAGCCAAGCACCATATC...AGGGGTTTCTGTATGATAGCTGGCTATACCAAAGGTAAAAGTTGCAATGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTATGTAAACCAAATAGGACATCAGAGCTCATACACGCAAATGAAATAAGTGCCTCCGCCATAAGCTaGACCGCTTCTCGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLCKPNRTSELIHANEISASAIS*TASRSF Trigger: GAAGGAGCGAGAAGCGGTCCAGCTTATGGCGGAGGC...ACTTATTTCATTTGCGTGTATGAGCTCTGATGTCCTATTTGGTTTACATAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTAGATACTGCGGGATTACAAGTGTTCATGATGCCTGGCCCAGCATTTAACTCTGGAGTCCGTAAATaGTGGAAACATTTCCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVDTAGLQVFMMPGPAFNSGVRK*WKHFLV Trigger: TACGAGGAAATGTTTCCAGCATTTACGGACTCCAGA...GTTAAATGCTGGGCCAGGCATCATGAACACTTGTAATCCCGCAGTATCTACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
||
| CDS-3UTR CCA 90 bp | GTTGTCAGTGTTTGTCATGCACATGTGAGCATATTTTGCAAAACAAGAAACATCCCTCGGAGGAAAGAGTaGGAAGCCTTCACTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVSVCHAHVSIFCKTRNIPRRKE*EAFTRF Trigger: GAAGCGAGTGAAGGCTTCCCACTCTTTCCTCCGAGG...GATGTTTCTTGTTTTGCAAAATATGCTCACATGTGCATGACAAACACTGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGTATCAACAAGGTTCCATTGCAACTTTTACCTTTGGTATAGCCAGCTAGAGTCATGCTTGCTCTaGAGCTGCATGTGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAVSTRFHCNFYLWYSQLESCLL*SCMWSL Trigger: CAAACTCCACATGCAGCTCCAGAGCAAGCATGACTC...TAGCTGGCTATACCAAAGGTAAAAGTTGCAATGGAACCTTGTTGATACTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
||
| CDS-3UTR CCA 90 bp | CTAAGTCACTTGTATAAAGGTTGCATCCAGATACCAATGCACAGGGTCTTTGCTTACGAAGCAACATGGTaGTCAGCCACTGATCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSHLYKGCIQIPMHRVFAYEATW*SATDPN Trigger: GTTTGGATCAGTGGCTGACCACCATGTTGCTTCGTA...AGCAAAGACCCTGTGCATTGGTATCTGGATGCAACCTTTATACAAGTGACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
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| CDS-3UTR CCA 90 bp | AATTCCATCTCACAGGTTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTCTCCATCCCCTTaGATGGACTTCTTGATACGA | + |
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Preference number: 4 (lower is better) Translates to: NSISQVLCVCVCVCVCVCPSPSP*MDFLIR Trigger: TCGTATCAAGAAGTCCATCCAAGGGGATGGAGAAGG...ACACACACACACACACACACACACACACACACATAAAACCTGTGAGATGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
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| CDS-3UTR TCA 90 bp | GGTTCCATTGCAACTTTTACCTTTGGTATAGCCAGCTATCATACAGAAACCCCTAGTTCTTGGCCATCTTaGACATATTTGCAGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GSIATFTFGIASYHTETPSSWPS*TYLQLW Trigger: CCAGAGCTGCAAATATGTTCAAGATGGCCAAGAACT...AGGGGTTTCTGTATGATAGCTGGCTATACCAAAGGTAAAAGTTGCAATGGAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR CAA 72 bp | ATAAAGGTTGCATCCAGATACCAATGCACAGGGTCTTaGCTAAGCATCTATAAAACTGGGTTGAGGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: IKVASRYQCTGS*LSIYKTGLRTR Trigger: TCTGGTCCTCAACCCAGTTTTATAGATGCTTAGCAAAGACCCTGTGCATTGGTATCTGGATGCAACCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS-3UTR CCA 90 bp | GTTGTCAGTGTTTGTCATGCACATGTGAGCATATTTTGCAAAACAAGAAACATCTCGGCAATGGTGATATaGTGCTTGGCTGCGATTGTG | + |
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Preference number: 4 (lower is better) Translates to: VVSVCHAHVSIFCKTRNISAMVI*CLAAIV Trigger: CACAATCGCAGCCAAGCACCATATCACCATTGCCGA...GATGTTTCTTGTTTTGCAAAATATGCTCACATGTGCATGACAAACACTGACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR CAA 72 bp | GGGAACAATAAATGCACAAGGGCTGGTGCATATACTTaGGTTATAGTGACACCATCACACATGGTTACAACT | + |
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Preference number: 4 (lower is better) Translates to: GNNKCTRAGAYT*VIVTPSHMVTT Trigger: AGTTGTAACCATGTGTGATGGTGTCACTATAACCAAAGTATATGCACCAGCCCTTGTGCATTTATTGTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS-3UTR GCA 90 bp | TGTATGCATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACGGTATACATTTCACATaGCTCTTCTATTCTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: CMHVLSACMREHHMHAWYGIHFT*LFYSCV Trigger: AACACAAGAATAGAAGAGGCATGTGAAATGTATACC...GTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATGCATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS-3UTR TCA 90 bp | GTCTTATGTAAACCAAATAGGACATCAGAGCTCATACACGCAAATGAAATAAGTCTTGGATGGACTTCTTaGTACGAAGCAACATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VLCKPNRTSELIHANEISLGWTS*YEATWW Trigger: CCACCATGTTGCTTCGTATCAAGAAGTCCATCCAAG...ACTTATTTCATTTGCGTGTATGAGCTCTGATGTCCTATTTGGTTTACATAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
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| CDS-3UTR CCA 90 bp | AATTCCATCTCACAGGTTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATATTTGCAGCTCTaGTATACATTTCACATGCCT | + |
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Preference number: 4 (lower is better) Translates to: NSISQVLCVCVCVCVCVCTYLQL*YTFHMP Trigger: AGGCATGTGAAATGTATACCAGAGCTGCAAATATGT...ACACACACACACACACACACACACACACACACATAAAACCTGTGAGATGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| 3UTR CAA 72 bp | AAACTTATTCCTAATAAGCACCCTAAACTAAGTCACTaGTATAAAGGTTGCATCCAGATACCAATGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: KLIPNKHPKLSH*YKGCIQIPMHR Trigger: CCTGTGCATTGGTATCTGGATGCAACCTTTATACAAGTGACTTAGTTTAGGGTGCTTATTAGGAATAAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS CCA 90 bp | TCTTCTATTCTTGTGTTTCCTCCGAACAACCCTCGGAGGAAAGAGTaGGAAGCCTTCACTCGCTTCTCGGCCTCCGCCATAAGCTGGACC | + |
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Preference number: 5 (lower is better) Translates to: SSILVFPPNNPRRKE*EAFTRFSASAISWT Trigger: GGTCCAGCTTATGGCGGAGGCCGAGAAGCGAGTGAAGGCTTCCCACTCTTTCCTCCGAGGGTTGTTCGGAGGAAACACAAGAATAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS-3UTR CAA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACTCTCCAGAGCAAGCTTaGCGTTCAGCTCATCCACTA | + |
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Preference number: 5 (lower is better) Translates to: FTRESRLASTSQQSSSLHSPEQA*RSAHPL Trigger: TAGTGGATGAGCTGAACGCAAAGCTTGCTCTGGAGA...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
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| CDS-3UTR CAA 90 bp | TTCACTAGGGAGTCCAGGCTGGCCTCAACCTCACAGCAATCCTCCTCCCTTCACCAGTTCTTGGCCATCTaGAACATATTTGCAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FTRESRLASTSQQSSSLHQFLAI*NIFAAL Trigger: CAGAGCTGCAAATATGTTCAAGATGGCCAAGAACTG...GTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGCCAGCCTGGACTCCCTAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS-3UTR CAA 90 bp | ACTGGAATTCCTGGGTTTACAGGTGGTTTTGAGCCACCCAACATGGGTGCTAGACCTTGGATGGACTTCTaGATACGAAGCAACATGGTG | + |
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Preference number: 5 (lower is better) Translates to: TGIPGFTGGFEPPNMGARPWMDF*IRSNMV Trigger: CACCATGTTGCTTCGTATCAAGAAGTCCATCCAAGG...TCTAGCACCCATGTTGGGTGGCTCAAAACCACCTGTAAACCCAGGAATTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
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| CDS-3UTR CAA 90 bp | CATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACCAGTGGATTGTGAACCTCCCCTaGAGGGTCTGCTTTCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: HVLSACMREHHMHAWYQWIVNLP*RVCFLV Trigger: TACAAGAAAGCAGACCCTCAAGGGGAGGTTCACAAT...CCACTGGTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| CDS-3UTR CAA 90 bp | CATGTTTTGTCTGCATGTATGCGTGAGCATCACATGCATGCCTGGTACCAGTGGCAGTTCTTGGCCATCTaGAACATATTTGCAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: HVLSACMREHHMHAWYQWQFLAI*NIFAAL Trigger: CAGAGCTGCAAATATGTTCAAGATGGCCAAGAACTG...CCACTGGTACCAGGCATGCATGTGATGCTCACGCATACATGCAGACAAAACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS-3UTR CAA 90 bp | ATTCCATCTCACAGGTTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTCTCCATCCCCTaGGATGGACTTCTTGATACG | + |
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Preference number: 5 (lower is better) Translates to: IPSHRFYVCVCVCVCVCVSFSIP*DGLLDT Trigger: CGTATCAAGAAGTCCATCCAAGGGGATGGAGAAGGA...CACACACACACACACACACACACACACACACACATAAAACCTGTGAGATGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
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| CDS-3UTR CAA 90 bp | TTCCTCGTATTTCTCCAGAGCAAGCTTTGCGTTCAGCTCATCCACTATGAAGTGATGCCTCTTCTATTCTaGTGTTTCCTCCGAACAACC | + |
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Preference number: 5 (lower is better) Translates to: FLVFLQSKLCVQLIHYEVMPLLF*CFLRTT Trigger: GGTTGTTCGGAGGAAACACAAGAATAGAAGAGGCAT...CACTTCATAGTGGATGAGCTGAACGCAAAGCTTGCTCTGGAGAAATACGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136513.2 |
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| CDS TCA 90 bp | CTTGACAAAACGCATTCCCTGCAGCACTCCAGTTCTTGGCCATCTTaGACATATTTGCAGCTCTGGTATACATTTCACATGCCTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: LDKTHSLQHSSSWPS*TYLQLWYTFHMPLL Trigger: TAGAAGAGGCATGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCCAAGAACTGGAGTGCTGCAGGGAATGCGTTTTGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS GCA 90 bp | CTTGGCCATCTTGAACATATTTGCAGCTCTGGTATACATTTCACATaGCTCTTCTATTCTTGTGTTTCCTCCGAACAACCCTCGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LGHLEHICSSGIHFT*LFYSCVSSEQPSEE Trigger: TTCCTCCGAGGGTTGTTCGGAGGAAACACAAGAATAGAAGAGGCATGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS GCA 90 bp | CGCATTCCCTGCAGCACTCCAGTTCTTGGCCATCTTGAACATATTTaGAGCTCTGGTATACATTTCACATGCCTCTTCTATTCTTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: RIPCSTPVLGHLEHI*SSGIHFTCLFYSCV Trigger: AACACAAGAATAGAAGAGGCATGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCCAAGAACTGGAGTGCTGCAGGGAATGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS-3UTR CAA 90 bp | CTAAGTCACTTGTATAAAGGTTGCATCCAGATACCAATGCACAGGGTCTTTGCTGCAGTTGATAGCCTCTaGAGGGTCTGCTTTCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LSHLYKGCIQIPMHRVFAAVDSL*RVCFLV Trigger: TACAAGAAAGCAGACCCTCAAGAGGCTATCAACTGC...AGCAAAGACCCTGTGCATTGGTATCTGGATGCAACCTTTATACAAGTGACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
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| CDS-3UTR CAA 90 bp | GTTAAAACAAAACCAAGGAAATCTACCTTGACATCCATCCAAACAAACAGGACCATGCCTCTTCTATTCTaGTGTTTCCTCCGAACAACC | + |
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Preference number: 5 (lower is better) Translates to: VKTKPRKSTLTSIQTNRTMPLLF*CFLRTT Trigger: GGTTGTTCGGAGGAAACACAAGAATAGAAGAGGCAT...GGTCCTGTTTGTTTGGATGGATGTCAAGGTAGATTTCCTTGGTTTTGTTTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS-3UTR CAA 90 bp | GTCTTATGTAAACCAAATAGGACATCAGAGCTCATACACGCAAATGAAATAAGTTTCAGCAGACACTTGTaGGCAGAGCTGTTAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: VLCKPNRTSELIHANEISFSRHL*AELLDS Trigger: GGAATCTAACAGCTCTGCCAACAAGTGTCTGCTGAA...ACTTATTTCATTTGCGTGTATGAGCTCTGATGTCCTATTTGGTTTACATAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028926.13 |
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| CDS-3UTR CAA 90 bp | GTCTTATGTAAACCAAATAGGACATCAGAGCTCATACACGCAAATGAAATAAGTGCAGCACTCCAGTTCTaGGCCATCTTGAACATATTT | + |
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Preference number: 5 (lower is better) Translates to: VLCKPNRTSELIHANEISAALQF*AILNIF Trigger: AAATATGTTCAAGATGGCCAAGAACTGGAGTGCTGC...ACTTATTTCATTTGCGTGTATGAGCTCTGATGTCCTATTTGGTTTACATAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS CCA 72 bp | CTTGTGTTTCCTCCGAACAACCCTCGGAGGAAAGAGTaGGAAGCCTTCACTCGCTTCTCGGCCTCCGCCATA | + |
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Preference number: 6 (lower is better) Translates to: LVFPPNNPRRKE*EAFTRFSASAI Trigger: TATGGCGGAGGCCGAGAAGCGAGTGAAGGCTTCCCACTCTTTCCTCCGAGGGTTGTTCGGAGGAAACACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS GCA 72 bp | CATGTGGAGTTTGGCAGCTTGACAAAACGCATTCCCTaGAGCACTCCAGTTCTTGGCCATCTTGAACATATT | + |
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Preference number: 6 (lower is better) Translates to: HVEFGSLTKRIP*STPVLGHLEHI Trigger: AATATGTTCAAGATGGCCAAGAACTGGAGTGCTGCAGGGAATGCGTTTTGTCAAGCTGCCAAACTCCACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS TCA 72 bp | ACGCATTCCCTGCAGCACTCCAGTTCTTGGCCATCTTaGACATATTTGCAGCTCTGGTATACATTTCACATG | + |
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Preference number: 6 (lower is better) Translates to: THSLQHSSSWPS*TYLQLWYTFHM Trigger: CATGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCCAAGAACTGGAGTGCTGCAGGGAATGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS CAA 72 bp | CAGCTCTGGTATACATTTCACATGCCTCTTCTATTCTaGTGTTTCCTCCGAACAACCCTCGGAGGAAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: QLWYTFHMPLLF*CFLRTTLGGKS Trigger: ACTCTTTCCTCCGAGGGTTGTTCGGAGGAAACACAAGAATAGAAGAGGCATGTGAAATGTATACCAGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS CAA 72 bp | AACGCATTCCCTGCAGCACTCCAGTTCTTGGCCATCTaGAACATATTTGCAGCTCTGGTATACATTTCACAT | + |
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Preference number: 6 (lower is better) Translates to: NAFPAALQFLAI*NIFAALVYISH Trigger: ATGTGAAATGTATACCAGAGCTGCAAATATGTTCAAGATGGCCAAGAACTGGAGTGCTGCAGGGAATGCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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| CDS GCA 72 bp | CTTGAACATATTTGCAGCTCTGGTATACATTTCACATaGCTCTTCTATTCTTGTGTTTCCTCCGAACAACCC | + |
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Preference number: 6 (lower is better) Translates to: LEHICSSGIHFT*LFYSCVSSEQP Trigger: GGGTTGTTCGGAGGAAACACAAGAATAGAAGAGGCATGTGAAATGTATACCAGAGCTGCAAATATGTTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028926.13 ENSMUST00000136513.2 |
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