Pregenerated sensors for NAP1L5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055430Ensembl transcript IDs: ENSMUST00000059539.5, ENSMUST00000205101.2
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAACAAACACTACCAAGAAAACAGGTAACACGGGACCATAACAGATaGACACGTGTTGACAATATTATACATGGAATACACCCTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: KQTLPRKQVTRDHNR*TRVDNIIHGIHPHF Trigger: AAAATGAGGGTGTATTCCATGTATAATATTGTCAACACGTGTTCATCTGTTATGGTCCCGTGTTACCTGTTTTCTTGGTAGTGTTTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| 3UTR-3UTR CCA 90 bp | GACGTCGTTCCTGGGTTCCTTTTCCTCTGCGCTGGAAAATGTAAAGAAACTGAAAGTTCTGTCTTAGCTTaGATGTTCTGGTGTAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: DVVPGFLFLCAGKCKETESSVLA*MFWCSV Trigger: CACACTACACCAGAACATCCAAGCTAAGACAGAACT...TTCAGTTTCTTTACATTTTCCAGCGCAGAGGAAAAGGAACCCAGGAACGACGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTTCACAAAGGTCAAACTAGGCAACACTGGATACACATGCTTTACAGAATTCACATAATCAGTAAATaGTGTCAGTCCAGGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RLHKGQTRQHWIHMLYRIHIISK*CQSRLA Trigger: AGCAAGCCTGGACTGACAGCATTTACTGATTATGTG...AATTCTGTAAAGCATGTGTATCCAGTGTTGCCTAGTTTGACCTTTGTGAAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| 3UTR CCA 72 bp | AGCATTGAGAAGAGTTCTGTCTTAGCTTGGATGTTCTaGTGTAGTGTGATGAATGGATTTCAACGTGTGACG | + |
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Preference number: 3 (lower is better) Translates to: SIEKSSVLAWMF*CSVMNGFQRVT Trigger: CGTCACACGTTGAAATCCATTCATCACACTACACCAGAACATCCAAGCTAAGACAGAACTCTTCTCAATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| 3UTR TCA 72 bp | CTACCAAGAAAACAGGTAACACGGGACCATAACAGATaGACACGTGTTGACAATATTATACATGGAATACAC | + |
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Preference number: 3 (lower is better) Translates to: LPRKQVTRDHNR*TRVDNIIHGIH Trigger: GTGTATTCCATGTATAATATTGTCAACACGTGTTCATCTGTTATGGTCCCGTGTTACCTGTTTTCTTGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| 3UTR GCA 72 bp | TTCACAAAGGTCAAACTAGGCAACACTGGATACACATaGTTTACAGAATTGCTACATTCTACATCTCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: FTKVKLGNTGYT*FTELLHSTSLQ Trigger: TTGAAGAGATGTAGAATGTAGCAATTCTGTAAAGCATGTGTATCCAGTGTTGCCTAGTTTGACCTTTGTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR TCA 90 bp | GCTGTCAGTCCAGGCTTGCTCCATGCCAAGGCTCCTCTGGAGTGTAAAGCTGATCCTCCATCTCTCCGGTaGGCTCCTGGATCTTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: AVSPGLLHAKAPLECKADPPSLR*APGSWR Trigger: TCGCCAAGATCCAGGAGCTCACCGGAGAGATGGAGG...ATCAGCTTTACACTCCAGAGGAGCCTTGGCATGGAGCAAGCCTGGACTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS-3UTR GCA 90 bp | TCAGTAAATGCTGTCAGTCCAGGCTTGCTCCATGCCAAGGCTCCTCTGGAGTGTCCCAGTTGCGCCAGCTaGAGCCTCTTCTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SVNAVSPGLLHAKAPLECPSCAS*SLFFLL Trigger: GAGGAGGAAGAAGAGGCTGCAGCTGGCGCAACTGGG...ACACTCCAGAGGAGCCTTGGCATGGAGCAAGCCTGGACTGACAGCATTTACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS-3UTR CCA 90 bp | GACGTCGTTCCTGGGTTCCTTTTCCTCTGCGCTGGAAAATGTAAAGAAACTGAATCTCCGGTGAGCTCCTaGATCTTGGCGAGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: DVVPGFLFLCAGKCKETESPVSS*ILASRG Trigger: GCCCCTGCTCGCCAAGATCCAGGAGCTCACCGGAGA...TTCAGTTTCTTTACATTTTCCAGCGCAGAGGAAAAGGAACCCAGGAACGACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCAGTCCAGGCTTGCTCCATGCCAAGGCTCCTCTGGAGTGTAAAGCTGATATTCCTTGTCAAACTTaGCCTCGATCTTATCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AVSPGLLHAKAPLECKADIPCQT*PRSYRS Trigger: GCTGCGATAAGATCGAGGCCAAGTTTGACAAGGAAT...ATCAGCTTTACACTCCAGAGGAGCCTTGGCATGGAGCAAGCCTGGACTGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR CCA 90 bp | AGCATTGAGAAGAGTTCTGTCTTAGCTTGGATGTTCTGGTGTAGTGTGATGAATTCTCCGGTGAGCTCCTaGATCTTGGCGAGCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SIEKSSVLAWMFWCSVMNSPVSS*ILASRG Trigger: GCCCCTGCTCGCCAAGATCCAGGAGCTCACCGGAGA...ATTCATCACACTACACCAGAACATCCAAGCTAAGACAGAACTCTTCTCAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS-3UTR TCA 90 bp | AGCATTGAGAAGAGTTCTGTCTTAGCTTGGATGTTCTGGTGTAGTGTGATGAATCCTCCATCTCTCCGGTaGGCTCCTGGATCTTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: SIEKSSVLAWMFWCSVMNPPSLR*APGSWR Trigger: TCGCCAAGATCCAGGAGCTCACCGGAGAGATGGAGG...ATTCATCACACTACACCAGAACATCCAAGCTAAGACAGAACTCTTCTCAATGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS-3UTR GCA 90 bp | AGACTTCACAAAGGTCAAACTAGGCAACACTGGATACACATGCTTTACAGAATTCCCAGTTGCGCCAGCTaGAGCCTCTTCTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RLHKGQTRQHWIHMLYRIPSCAS*SLFFLL Trigger: GAGGAGGAAGAAGAGGCTGCAGCTGGCGCAACTGGG...AATTCTGTAAAGCATGTGTATCCAGTGTTGCCTAGTTTGACCTTTGTGAAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR TCA 90 bp | AGCATTGAGAAGAGTTCTGTCTTAGCTTGGATGTTCTGGTGTAGTGTGATGAATGCTTCTGCAGCTTTTTaGGCGCCAGAACCCGGCATT | + |
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Preference number: 4 (lower is better) Translates to: SIEKSSVLAWMFWCSVMNASAAF*APEPGI Trigger: AATGCCGGGTTCTGGCGCTCAAAAAGCTGCAGAAGC...ATTCATCACACTACACCAGAACATCCAAGCTAAGACAGAACTCTTCTCAATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR CCA 90 bp | AGACTTCACAAAGGTCAAACTAGGCAACACTGGATACACATGCTTTACAGAATTTTCTTCTCCAGAGCCTaGAATTCCTTGTCAAACTTG | + |
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Preference number: 4 (lower is better) Translates to: RLHKGQTRQHWIHMLYRIFFSRA*NSLSNL Trigger: CAAGTTTGACAAGGAATTCCAGGCTCTGGAGAAGAA...AATTCTGTAAAGCATGTGTATCCAGTGTTGCCTAGTTTGACCTTTGTGAAGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| 3UTR CAA 72 bp | TCTTCAAGTATATACTTTTTCCAAACATTAGCTTCATaGAGGAGTTCTGATGGTTTTCACAGCTACTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: SSSIYFFQTLAS*RSSDGFHSYLL Trigger: TAGCAAGTAGCTGTGAAAACCATCAGAACTCCTCAATGAAGCTAATGTTTGGAAAAAGTATATACTTGAAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS TCA 90 bp | CATCCTCTCCCTCCAGGGTCCACGCGCAGCCCTCCATCTCTCCGGTaGGCTCCTGGATCTTGGCGAGCAGGGGCTTGTAGATATCGTTGT | + |
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Preference number: 5 (lower is better) Translates to: HPLPPGSTRSPPSLR*APGSWRAGACRYRC Trigger: ACAACGATATCTACAAGCCCCTGCTCGCCAAGATCCAGGAGCTCACCGGAGAGATGGAGGGCTGCGCGTGGACCCTGGAGGGAGAGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR CAA 90 bp | GCTGTCAGTCCAGGCTTGCTCCATGCCAAGGCTCCTCTGGAGTGTAAAGCTGATCGCTTCTGCAGCTTTTaGAGCGCCAGAACCCGGCAT | + |
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Preference number: 5 (lower is better) Translates to: AVSPGLLHAKAPLECKADRFCSF*SARTRH Trigger: ATGCCGGGTTCTGGCGCTCAAAAAGCTGCAGAAGCG...ATCAGCTTTACACTCCAGAGGAGCCTTGGCATGGAGCAAGCCTGGACTGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS TCA 90 bp | TGTCAAACTTGGCCTCGATCTTATCGCAGCGCTTCTGCAGCTTTTTaGGCGCCAGAACCCGGCATTTCACGGAATTGGGCAAGCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: CQTWPRSYRSASAAF*APEPGISRNWASSP Trigger: TGGAGAGCTTGCCCAATTCCGTGAAATGCCGGGTTCTGGCGCTCAAAAAGCTGCAGAAGCGCTGCGATAAGATCGAGGCCAAGTTTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR CAA 90 bp | GCTGTCAGTCCAGGCTTGCTCCATGCCAAGGCTCCTCTGGAGTGTAAAGCTGATTCCATAAAGTCTTTTTaGGGCTTGGGCGCGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: AVSPGLLHAKAPLECKADSIKSF*GLGAFS Trigger: GGAGAACGCGCCCAAGCCCAAAAAAGACTTTATGGA...ATCAGCTTTACACTCCAGAGGAGCCTTGGCATGGAGCAAGCCTGGACTGACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR CAA 90 bp | ATGACGTCGTTCCTGGGTTCCTTTTCCTCTGCGCTGGAAAATGTAAAGAAACTGAGTTGGGACCCCCAGTaGCGCCAGCTGCAGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: MTSFLGSFSSALENVKKLSWDPQ*RQLQPL Trigger: AAGAGGCTGCAGCTGGCGCAACTGGGGGTCCCAACT...CAGTTTCTTTACATTTTCCAGCGCAGAGGAAAAGGAACCCAGGAACGACGTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS-3UTR CAA 90 bp | TTAAGCATTGAGAAGAGTTCTGTCTTAGCTTGGATGTTCTGGTGTAGTGTGATGAGTTGGGACCCCCAGTaGCGCCAGCTGCAGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LSIEKSSVLAWMFWCSVMSWDPQ*RQLQPL Trigger: AAGAGGCTGCAGCTGGCGCAACTGGGGGTCCCAACT...CATCACACTACACCAGAACATCCAAGCTAAGACAGAACTCTTCTCAATGCTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS-3UTR CAA 90 bp | AGCATTGAGAAGAGTTCTGTCTTAGCTTGGATGTTCTGGTGTAGTGTGATGAATAGAGCCTGGAATTCCTaGTCAAACTTGGCCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: SIEKSSVLAWMFWCSVMNRAWNS*SNLASI Trigger: GATCGAGGCCAAGTTTGACAAGGAATTCCAGGCTCT...ATTCATCACACTACACCAGAACATCCAAGCTAAGACAGAACTCTTCTCAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR CAA 90 bp | AGACTTCACAAAGGTCAAACTAGGCAACACTGGATACACATGCTTTACAGAATTCGGCATTTCACGGAATaGGGCAAGCTCTCCATAAAG | + |
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Preference number: 5 (lower is better) Translates to: RLHKGQTRQHWIHMLYRIRHFTE*GKLSIK Trigger: CTTTATGGAGAGCTTGCCCAATTCCGTGAAATGCCG...AATTCTGTAAAGCATGTGTATCCAGTGTTGCCTAGTTTGACCTTTGTGAAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS-3UTR CAA 90 bp | AGACTTCACAAAGGTCAAACTAGGCAACACTGGATACACATGCTTTACAGAATTAATTCCTTGTCAAACTaGGCCTCGATCTTATCGCAG | + |
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Preference number: 5 (lower is better) Translates to: RLHKGQTRQHWIHMLYRINSLSN*ASILSQ Trigger: CTGCGATAAGATCGAGGCCAAGTTTGACAAGGAATT...AATTCTGTAAAGCATGTGTATCCAGTGTTGCCTAGTTTGACCTTTGTGAAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS TCA 72 bp | CCTCCAGGGTCCACGCGCAGCCCTCCATCTCTCCGGTaGGCTCCTGGATCTTGGCGAGCAGGGGCTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: PPGSTRSPPSLR*APGSWRAGACR Trigger: TCTACAAGCCCCTGCTCGCCAAGATCCAGGAGCTCACCGGAGAGATGGAGGGCTGCGCGTGGACCCTGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS GCA 72 bp | CTTCTTGGCGAAGTTGGGACCCCCAGTTGCGCCAGCTaGAGCCTCTTCTTCCTCCTCCTCCTCCTCGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: LLGEVGTPSCAS*SLFFLLLLLVV Trigger: GACGACGAGGAGGAGGAGGAGGAAGAAGAGGCTGCAGCTGGCGCAACTGGGGGTCCCAACTTCGCCAAGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059539.5 ENSMUST00000205101.2 |
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| CDS TCA 72 bp | TGGCCTCGATCTTATCGCAGCGCTTCTGCAGCTTTTTaGGCGCCAGAACCCGGCATTTCACGGAATTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: WPRSYRSASAAF*APEPGISRNWA Trigger: TGCCCAATTCCGTGAAATGCCGGGTTCTGGCGCTCAAAAAGCTGCAGAAGCGCTGCGATAAGATCGAGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS CAA 72 bp | TTGGCCTCGATCTTATCGCAGCGCTTCTGCAGCTTTTaGAGCGCCAGAACCCGGCATTTCACGGAATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LASILSQRFCSF*SARTRHFTELG Trigger: GCCCAATTCCGTGAAATGCCGGGTTCTGGCGCTCAAAAAGCTGCAGAAGCGCTGCGATAAGATCGAGGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS CAA 90 bp | TTGTCAAACTTGGCCTCGATCTTATCGCAGCGCTTCTGCAGCTTTTaGAGCGCCAGAACCCGGCATTTCACGGAATTGGGCAAGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSNLASILSQRFCSF*SARTRHFTELGKLS Trigger: GGAGAGCTTGCCCAATTCCGTGAAATGCCGGGTTCTGGCGCTCAAAAAGCTGCAGAAGCGCTGCGATAAGATCGAGGCCAAGTTTGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS CAA 90 bp | ATATCGTTGTACTTCTTCTCCAGAGCCTGGAATTCCTTGTCAAACTaGGCCTCGATCTTATCGCAGCGCTTCTGCAGCTTTTTGAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: ISLYFFSRAWNSLSN*ASILSQRFCSFLSA Trigger: GGCGCTCAAAAAGCTGCAGAAGCGCTGCGATAAGATCGAGGCCAAGTTTGACAAGGAATTCCAGGCTCTGGAGAAGAAGTACAACGATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS CCA 72 bp | ACTTCTTCTCCAGAGCCTGGAATTCCTTGTCAAACTTaGCCTCGATCTTATCGCAGCGCTTCTGCAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: TSSPEPGIPCQT*PRSYRSASAAF Trigger: AAAAGCTGCAGAAGCGCTGCGATAAGATCGAGGCCAAGTTTGACAAGGAATTCCAGGCTCTGGAGAAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS CAA 72 bp | TACTTCTTCTCCAGAGCCTGGAATTCCTTGTCAAACTaGGCCTCGATCTTATCGCAGCGCTTCTGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: YFFSRAWNSLSN*ASILSQRFCSF Trigger: AAAGCTGCAGAAGCGCTGCGATAAGATCGAGGCCAAGTTTGACAAGGAATTCCAGGCTCTGGAGAAGAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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| CDS CAA 72 bp | ATATCGTTGTACTTCTTCTCCAGAGCCTGGAATTCCTaGTCAAACTTGGCCTCGATCTTATCGCAGCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ISLYFFSRAWNS*SNLASILSQRF Trigger: GAAGCGCTGCGATAAGATCGAGGCCAAGTTTGACAAGGAATTCCAGGCTCTGGAGAAGAAGTACAACGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059539.5 |
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