Pregenerated sensors for NAP1L4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059119Ensembl transcript IDs: ENSMUST00000072727.7, ENSMUST00000208093.2, ENSMUST00000208190.2, ENSMUST00000208317.2, ENSMUST00000209098.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCACAGCACAGCAGTTGGTGGCAGGAAGCAGCAGGGCTTCCTCCATaGGCCTCCCTCCACTTGGTGTCACATCCTCCTGATCAAGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: AQHSSWWQEAAGLPP*ASLHLVSHPPDQVS Trigger: GCTGACTTGATCAGGAGGATGTGACACCAAGTGGAGGGAGGCTCATGGAGGAAGCCCTGCTGCTTCCTGCCACCAACTGCTGTGCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR CCA 90 bp | GCTGAGCACACTCTACATGGCTGGTCACTGTGGACATGGCTGTCCTaGCTACCAGAGACACCACCATACTCTCAGAAACACCCCTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: AEHTLHGWSLWTWLS*LPETPPYSQKHPSP Trigger: GGGGGAGGGGTGTTTCTGAGAGTATGGTGGTGTCTCTGGTAGCCAGGACAGCCATGTCCACAGTGACCAGCCATGTAGAGTGTGCTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR GCA 90 bp | ACACCAACCACCAACTGGTCACCAAACCCAGGTGTGGCCCTGGTGTaGACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCT | + |
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Preference number: 1 (lower is better) Translates to: TPTTNWSPNPGVALV*TVQAEAVLHRPEIP Trigger: AGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACACCTGGGTTTGGTGACCAGTTGGTGGTTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR GCA 90 bp | CAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTaGCAACTTCCAGCGGCAATAACATGTAGTCTGCATGGCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: QRSLVKENFCPLATA*QLPAAITCSLHGTA Trigger: TGCTGTGCCATGCAGACTACATGTTATTGCCGCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR CCA 90 bp | AGCAAAGTAAGAAGGGAAAGGGGAGAGGAATCATGCACTTGGAAATaGTTAGATGTCACAGCACTGTCAACAAAATTCTGCTTTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SKVRRERGEESCTWK*LDVTALSTKFCFGR Trigger: CCTGCCAAAGCAGAATTTTGTTGACAGTGCTGTGACATCTAACCATTTCCAAGTGCATGATTCCTCTCCCCTTTCCCTTCTTACTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR GCA 90 bp | CTGTACAAGTTTAGCAAAGTAAGAAGGGAAAGGGGAGAGGAATCATaGACTTGGAAATGGTTAGATGTCACAGCACTGTCAACAAAATTC | + |
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Preference number: 1 (lower is better) Translates to: LYKFSKVRRERGEES*TWKWLDVTALSTKF Trigger: GAATTTTGTTGACAGTGCTGTGACATCTAACCATTTCCAAGTGCATGATTCCTCTCCCCTTTCCCTTCTTACTTTGCTAAACTTGTACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR CCA 90 bp | AAGTTTAGCAAAGTAAGAAGGGAAAGGGGAGAGGAATCATGCACTTaGAAATGGTTAGATGTCACAGCACTGTCAACAAAATTCTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: KFSKVRRERGEESCT*KWLDVTALSTKFCF Trigger: AAAGCAGAATTTTGTTGACAGTGCTGTGACATCTAACCATTTCCAAGTGCATGATTCCTCTCCCCTTTCCCTTCTTACTTTGCTAAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCGATGACTAGGGCACAGCAGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGCTTTGGCAGGGACTaGGGCCCCTGCCTGCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: WAMTRAQQLEQLPTQFSSCFGRD*GPCLRP Trigger: AGGCCGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCA...GCTGCTGAACTGCGTGGGAAGCTGCTCCAGCTGCTGTGCCCTAGTCATCGCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGTGCTTTGGCAGGGACTaGGGCCCCTGCCTGCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SSWSSFPRSSAAGNHGALCFGRD*GPCLRP Trigger: AGGCCGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCA...CAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTTTGCTTTGGCAGGGACTaGGGCCCCTGCCTGCGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QRSLVKENFCPLATACQLCFGRD*GPCLRP Trigger: AGGCCGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCA...AAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR GCA 90 bp | CCGGGTGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCGCCCCACAGGGTCACTaGTTCTCACTGCTGCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: PGAHNHRLCQSQAQPRSTAPQGH*FSLLLA Trigger: TGCAAGCAGCAGTGAGAAGCAGTGACCCTGTGGGGC...GGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCACCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072727.7 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAAGTAGGGAGGGCCGGGTaGACACAATCACAGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GQRSLVKENFCPLATACQVGRAG*TQSQAL Trigger: CAGAGCCTGTGATTGTGTGCACCCGGCCCTCCCTAC...TTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGGGCACAGCAGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGTAGGGAGGGCCGGGTaGACACAATCACAGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LGHSSWSSFPRSSAAGNHVGRAG*TQSQAL Trigger: CAGAGCCTGTGATTGTGTGCACCCGGCCCTCCCTAC...ATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCTGCTGTGCCCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCTTGCCAGTAGGGAGGGCCGGGTGCACACAATCACAGGCTCTGTCAATCAACAAAATTCTGCTTTaGCAGGGACTGAGGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GALPVGRAGCTQSQALSINKILL*QGLRPL Trigger: CAGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTT...GATTGACAGAGCCTGTGATTGTGTGCACCCGGCCCTCCCTACTGGCAAGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTTCCAGCCTAGGGCACAGCAGCTaGAGCAGCTTCCCACGCAGT | + |
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Preference number: 2 (lower is better) Translates to: IPSEGELLSPGYSLPTSSLGHSS*SSFPRS Trigger: ACTGCGTGGGAAGCTGCTCCAGCTGCTGTGCCCTAG...GCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAGGAGAACGCAGGGCTTCCTCCATaGGCCTCCCTCCACTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: QYKLKLYSTGQRSLVKENAGLPP*ASLHLV Trigger: CACCAAGTGGAGGGAGGCTCATGGAGGAAGCCCTGC...GTTCTCCTTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGGCTGTCCTGGCTACCAGAGACACCACCATACTCTCAGAAACACCCCTCCCCCCTGGCTACAGCCTaGCAACTTCCAGCGGCAATA | + |
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Preference number: 2 (lower is better) Translates to: TWLSWLPETPPYSQKHPSPLATA*QLPAAI Trigger: TATTGCCGCTGGAAGTTGGCAGGCTGTAGCCAGGGG...GGAGGGGTGTTTCTGAGAGTATGGTGGTGTCTCTGGTAGCCAGGACAGCCATGT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGCCAAACAAAATTCTGCTTTaGCAGGGACTGAGGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: SWSSFPRSSAAGNHGALPNKILL*QGLRPL Trigger: CAGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTT...TGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAGGAGAACCAGCACAGCAGTTGGTaGCAGGAAGCAGCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: QYKLKLYSTGQRSLVKENQHSSW*QEAAGL Trigger: AAGCCCTGCTGCTTCCTGCCACCAACTGCTGTGCTG...GTTCTCCTTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGCCAACTAATCTCCTATTCTaGACTGCAGCAGTCTCCACT | + |
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Preference number: 2 (lower is better) Translates to: SWSSFPRSSAAGNHGALPTNLLF*TAAVST Trigger: AGTGGAGACTGCTGCAGTTCAGAATAGGAGATTAGT...TGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | ACATGGCTGTCCTGGCTACCAGAGACACCACCATACTCTCAGAAACACCCCTCCAACAAAATTCTGCTTTaGCAGGGACTGAGGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: TWLSWLPETPPYSQKHPSNKILL*QGLRPL Trigger: CAGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTT...GGAGGGGTGTTTCTGAGAGTATGGTGGTGTCTCTGGTAGCCAGGACAGCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAGACGCAGTTCAGCAGCTaGAAATCATGGGGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: CAQYKLKLYSTGQRSLVKTQFSS*KSWGLA Trigger: GGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGT...CTTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGCCAGTGAGGAATCATGCACTTaGAAATGGTTAGATGTCACA | + |
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Preference number: 2 (lower is better) Translates to: LEQLPTQFSSWKSWGLASEESCT*KWLDVT Trigger: TGTGACATCTAACCATTTCCAAGTGCATGATTCCTC...ACTGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAGATCAAGTCAGCAACATaGTCTCGTAAGTGGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: CAQYKLKLYSTGQRSLVKIKSAT*SRKWED Trigger: GTCCTCCCACTTACGAGACCATGTTGCTGACTTGAT...CTTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAATCAAGTCAGCAACATaGTCTCGTAAGTGGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: VCTVQAEAVLHRPEIPSEIKSAT*SRKWED Trigger: GTCCTCCCACTTACGAGACCATGTTGCTGACTTGAT...TTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTTCCAGCGGCAATAACATGTGAGGAATCATGCACTTaGAAATGGTTAGATGTCACA | + |
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Preference number: 2 (lower is better) Translates to: ENFCPLATACQLPAAITCEESCT*KWLDVT Trigger: TGTGACATCTAACCATTTCCAAGTGCATGATTCCTC...ACATGTTATTGCCGCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR TCA 72 bp | GCAGGGACTGAGGCCCCTGCCTGCGGCCTGCGGTCCTaGCAGCCATCCACAAGGCGGCCCCACAGGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: AGTEAPACGLRS*QPSTRRPHRVT Trigger: AGTGACCCTGTGGGGCCGCCTTGTGGATGGCTGTCAGGACCGCAGGCCGCAGGCAGGGGCCTCAGTCCCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR GCA 72 bp | CTGCTTTGGCAGGGACTGAGGCCCCTGCCTGCGGCCTaGGGTCCTGACAGCCATCCACAAGGCGGCCCCACA | + |
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Preference number: 3 (lower is better) Translates to: LLWQGLRPLPAA*GPDSHPQGGPT Trigger: TGTGGGGCCGCCTTGTGGATGGCTGTCAGGACCGCAGGCCGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR CCA 72 bp | GAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATaGGGCCTTGCCAGTAGGGAGGGCCGGGTGCACACA | + |
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Preference number: 3 (lower is better) Translates to: EQLPTQFSSWKS*GLASREGRVHT Trigger: TGTGTGCACCCGGCCCTCCCTACTGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGGCCAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGGGAAATCATGGGGCCTaGCCAGTAGGGAGGGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: HRPEIPSEGELLSPGYSLGNHGA*PVGRAG Trigger: CCCGGCCCTCCCTACTGGCAAGGCCCCATGATTTCC...CAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTGGCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR TCA 72 bp | AAGGCGAGCACAGCTTCCTCTACAGTGCTTGGGCGATaGCTAGGGCACAGCAGCTGGAGCAGCTTCCCACGC | + |
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Preference number: 3 (lower is better) Translates to: KASTASSTVLGR*LGHSSWSSFPR Trigger: GCGTGGGAAGCTGCTCCAGCTGCTGTGCCCTAGTCATCGCCCAAGCACTGTAGAGGAAGCTGTGCTCGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CAA 90 bp | CAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTTGGAAATCATGGGGCCTaGCCAGTAGGGAGGGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: QRSLVKENFCPLATACQLGNHGA*PVGRAG Trigger: CCCGGCCCTCCCTACTGGCAAGGCCCCATGATTTCC...AAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CAA 90 bp | ATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTTCCAGCAGCACAGCACAGCAGTaGGTGGCAGGAAGCAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: IPSEGELLSPGYSLPTSSSTAQQ*VAGSSR Trigger: CCTGCTGCTTCCTGCCACCAACTGCTGTGCTGTGCT...GCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGCCACAACAAAATTCTGCTTaGGCAGGGACTGAGGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: SWSSFPRSSAAGNHGALPQQNSA*AGTEAP Trigger: AGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTTG...TGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR GCA 72 bp | ACCAACTGGTCACCAAACCCAGGTGTGGCCCTGGTGTaGACAGTACAAGCTGAAGCTGTACTCCACAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: TNWSPNPGVALV*TVQAEAVLHRP Trigger: TGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACACCTGGGTTTGGTGACCAGTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGGCCAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCAACAAAATTCTGCTTaGGCAGGGACTGAGGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: HRPEIPSEGELLSPGYSLQQNSA*AGTEAP Trigger: AGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTTG...CAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTGGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR CCA 72 bp | CAACCACCAACTGGTCACCAAACCCAGGTGTGGCCCTaGTGTGCACAGTACAAGCTGAAGCTGTACTCCACA | + |
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Preference number: 3 (lower is better) Translates to: QPPTGHQTQVWP*CAQYKLKLYST Trigger: TGTGGAGTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACACCTGGGTTTGGTGACCAGTTGGTGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTCAACAAAATTCTGCTTaGGCAGGGACTGAGGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: PEIPSEGELLSPGYSLPTQQNSA*AGTEAP Trigger: AGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTTG...AGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGAAAGGGGAGAGGAATCATGCACTTGGAAATGGTTAGATGTCACAGCACTGCTTCTCACTGCTGCTaGCACTCCGCTGGCTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: KGKGRGIMHLEMVRCHSTASHCC*HSAGWL Trigger: CAGCCAGCCAGCGGAGTGCAAGCAGCAGTGAGAAGC...AGTGCTGTGACATCTAACCATTTCCAAGTGCATGATTCCTCTCCCCTTTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072727.7 |
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| 3UTR CCA 72 bp | ACTCTACATGGCTGGTCACTGTGGACATGGCTGTCCTaGCTACCAGAGACACCACCATACTCTCAGAAACAC | + |
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Preference number: 3 (lower is better) Translates to: TLHGWSLWTWLS*LPETPPYSQKH Trigger: GTGTTTCTGAGAGTATGGTGGTGTCTCTGGTAGCCAGGACAGCCATGTCCACAGTGACCAGCCATGTAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCCCAAGAGGAATCATGCACTaGGAAATGGTTAGATGTCAC | + |
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Preference number: 3 (lower is better) Translates to: GAHNHRLCQSQAQPRSTPRGIMH*EMVRCH Trigger: GTGACATCTAACCATTTCCAAGTGCATGATTCCTCT...TGGGGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR GCA 72 bp | CTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTaGCAACTTCCAGCGGCAATAACATGTAGTCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: LVKENFCPLATA*QLPAAITCSLH Trigger: ATGCAGACTACATGTTATTGCCGCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR CCA 72 bp | ACTTGGTGTCACATCCTCCTGATCAAGTCAGCAACATaGTCTCGTAAGTGGGAGGACAGTGAAGTCCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TWCHILLIKSAT*SRKWEDSEVQS Trigger: GCTTTGGACTTCACTGTCCTCCCACTTACGAGACCATGTTGCTGACTTGATCAGGAGGATGTGACACCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| 3UTR GCA 72 bp | TTTAGCAAAGTAAGAAGGGAAAGGGGAGAGGAATCATaGACTTGGAAATGGTTAGATGTCACAGCACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FSKVRRERGEES*TWKWLDVTALS Trigger: TGACAGTGCTGTGACATCTAACCATTTCCAAGTGCATGATTCCTCTCCCCTTTCCCTTCTTACTTTGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTGCTTTGGCAGGGACTGAGGCCCCTGCCTGCGGCCTGCGGTCCTGACAGCTGCAGGGCCTCCATCTaGAAGACTGTTTTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILLWQGLRPLPAACGPDSCRASI*KTVFCH Trigger: ATGGCAGAAAACAGTCTTTCAGATGGAGGCCCTGCA...GCTGTCAGGACCGCAGGCCGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| 3UTR CAA 72 bp | TTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTaGCCAGTAGGGAGGGCCGGGTGCACACAATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPRSSAAGNHGA*PVGRAGCTQSQ Trigger: CTGTGATTGTGTGCACCCGGCCCTCCCTACTGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCCTTGCCAGTAGGGAGGGCCGGGTGCACACAATCACAGGCTCTGTCAATCTGCAGGGCCTCCATCTaGAAGACTGTTTTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GALPVGRAGCTQSQALSICRASI*KTVFCH Trigger: ATGGCAGAAAACAGTCTTTCAGATGGAGGCCCTGCA...GATTGACAGAGCCTGTGATTGTGTGCACCCGGCCCTCCCTACTGGCAAGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTTCCAGCCTATGGCCTCCCCAGTaGAGTAGAGGACAGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSEGELLSPGYSLPTSSLWPPQ*SRGQPV Trigger: CACGGGCTGTCCTCTACTTCACTGGGGAGGCCATAG...GCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGAGCTGCCAGCACTTGTaGGTTCTGCATCACCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSWSSFPRSSAAGNHGALSCQHL*VLHHLV Trigger: GACCAGGTGATGCAGAACCCACAAGTGCTGGCAGCT...CAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | CCGGGTGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCTGCAGGGCCTCCATCTaGAAGACTGTTTTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGAHNHRLCQSQAQPRSTCRASI*KTVFCH Trigger: ATGGCAGAAAACAGTCTTTCAGATGGAGGCCCTGCA...GGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCACCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTGCTTTGGCAGGGACTGAGGCCCCTGCCTGCGGCCTGCGGTCCTGACAGCTCGTTGGGTTCAAAGTaGAACTCTAGCACAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLWQGLRPLPAACGPDSSLGSK*NSSTKD Trigger: GTCTTTTGTGCTAGAGTTTCACTTTGAACCCAACGA...GCTGTCAGGACCGCAGGCCGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCGATGACTAGGGCACAGCAGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCAGTCAGAGGCTAAGGTaGACTCGGAATCTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WAMTRAQQLEQLPTQFSSSQRLR*TRNLHP Trigger: TGGATGAAGATTCCGAGTTCACCTTAGCCTCTGACT...GCTGCTGAACTGCGTGGGAAGCTGCTCCAGCTGCTGTGCCCTAGTCATCGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCCTTGCCAGTAGGGAGGGCCGGGTGCACACAATCACAGGCTCTGTCAATCAGTCAGAGGCTAAGGTaGACTCGGAATCTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GALPVGRAGCTQSQALSISQRLR*TRNLHP Trigger: TGGATGAAGATTCCGAGTTCACCTTAGCCTCTGACT...GATTGACAGAGCCTGTGATTGTGTGCACCCGGCCCTCCCTACTGGCAAGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCGATGACTAGGGCACAGCAGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTTGTCAAGACGTTCCTaGAAAGCTGCCAGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WAMTRAQQLEQLPTQFSSLSRRS*KAASTC Trigger: ACAAGTGCTGGCAGCTTTGCAGGAACGTCTTGACAA...GCTGCTGAACTGCGTGGGAAGCTGCTCCAGCTGCTGTGCCCTAGTCATCGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR CCA 90 bp | TGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCCCAAGAGCTGCCAGCACTTGTaGGTTCTGCATCACCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTQSQALSIPGTTSVHPKSCQHL*VLHHLV Trigger: GACCAGGTGATGCAGAACCCACAAGTGCTGGCAGCT...CTTGGGGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTACTCAGGGATGCCTTTaGGGTTCAGCTCTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TAAGAASHAVQQLEIMGPTQGCL*GSALPL Trigger: CAGTGGAAGAGCTGAACCCCAAAGGCATCCCTGAGT...AGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGCCAGTCAGGACAGGATTGGTaGAGTAGTCGTTGGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGAASHAVQQLEIMGPCQSGQDW*SSRWVQ Trigger: TTGAACCCAACGACTACTTCACCAATCCTGTCCTGA...CTGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | CCGGGTGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCAGTCAGAGGCTAAGGTaGACTCGGAATCTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGAHNHRLCQSQAQPRSTSQRLR*TRNLHP Trigger: TGGATGAAGATTCCGAGTTCACCTTAGCCTCTGACT...GGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCACCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAACTATGGCCTCCCCAGTaGAGTAGAGGACAGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCTVQAEAVLHRPEIPSELWPPQ*SRGQPV Trigger: CACGGGCTGTCCTCTACTTCACTGGGGAGGCCATAG...TTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | AATCATGGGGCCTTGCCAGTAGGGAGGGCCGGGTGCACACAATCACAGGCTCTGGGCCTTGTCTGGCTCTaGTTTCATCTTGTACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHGALPVGRAGCTQSQALGLVWL*FHLVRF Trigger: AAAACGTACAAGATGAAATCAGAGCCAGACAAGGCC...CAGAGCCTGTGATTGTGTGCACCCGGCCCTCCCTACTGGCAAGGCCCCATGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGTTGTCAAGACGTTCCTaGAAAGCTGCCAGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWSSFPRSSAAGNHGALLSRRS*KAASTC Trigger: ACAAGTGCTGGCAGCTTTGCAGGAACGTCTTGACAA...CAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGCTGTCCTGGCTACCAGAGACACCACCATACTCTCAGAAACACCCCTCCAGGCTGGTACAAGGCTaGATACTTCCTCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TWLSWLPETPPYSQKHPSRLVQG*ILPLQV Trigger: GACCTGGAGAGGAAGTATGCAGCCTTGTACCAGCCT...GGAGGGGTGTTTCTGAGAGTATGGTGGTGTCTCTGGTAGCCAGGACAGCCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | ACCAACTGGTCACCAAACCCAGGTGTGGCCCTGGTGTGCACAGTACAAGCTGAAGTGCCCCGGCCCTTGTaGTTCTGCTTTTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TNWSPNPGVALVCTVQAEVPRPL*FCFFLM Trigger: CATCAAGAAAAAGCAGAAGCACAAGGGCCGGGGCAC...TTCAGCTTGTACTGTGCACACCAGGGCCACACCTGGGTTTGGTGACCAGTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | ACATGTAGTCTGCATGGCACAGCACAGCACAGCACAGCAGTTGGTGGCAGGAAGGTGCCCCGGCCCTTGTaGTTCTGCTTTTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TCSLHGTAQHSTAVGGRKVPRPL*FCFFLM Trigger: CATCAAGAAAAAGCAGAAGCACAAGGGCCGGGGCAC...CTTCCTGCCACCAACTGCTGTGCTGTGCTGTGCTGTGCCATGCAGACTACATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTTAGCTGCCAGCACTTGTaGGTTCTGCATCACCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QRSLVKENFCPLATACQLSCQHL*VLHHLV Trigger: GACCAGGTGATGCAGAACCCACAAGTGCTGGCAGCT...AAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR CCA 90 bp | ACATGTAGTCTGCATGGCACAGCACAGCACAGCACAGCAGTTGGTGGCAGGAAGACTCAGGGATGCCTTTaGGGTTCAGCTCTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TCSLHGTAQHSTAVGGRKTQGCL*GSALPL Trigger: CAGTGGAAGAGCTGAACCCCAAAGGCATCCCTGAGT...CTTCCTGCCACCAACTGCTGTGCTGTGCTGTGCTGTGCCATGCAGACTACATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGCCAGGCCTTGTCTGGCTCTaGTTTCATCTTGTACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SWSSFPRSSAAGNHGALPGLVWL*FHLVRF Trigger: AAAACGTACAAGATGAAATCAGAGCCAGACAAGGCC...TGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAATTGTCAAGACGTTCCTaGAAAGCTGCCAGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQRSLVKENFCPLATACQLSRRS*KAASTC Trigger: ACAAGTGCTGGCAGCTTTGCAGGAACGTCTTGACAA...TTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | GGTGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCCCACAGCTCTTCCACTGTTaGTGCTTCTTTCTCAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GAHNHRLCQSQAQPRSTPQLFHC*CFFLSY Trigger: ATAGCTGAGAAAGAAGCAGCAACAGTGGAAGAGCTG...TGGGGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGCCACAGCTCTTCCACTGTTaGTGCTTCTTTCTCAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SWSSFPRSSAAGNHGALPQLFHC*CFFLSY Trigger: ATAGCTGAGAAAGAAGCAGCAACAGTGGAAGAGCTG...TGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | CCAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTACCAGAACTCAGGGATaGCTTTGGGGTTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PEIPSEGELLSPGYSLPTTRTQG*LWGSAL Trigger: AAGAGCTGAACCCCAAAGGCATCCCTGAGTTCTGGT...AGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | ACATGTAGTCTGCATGGCACAGCACAGCACAGCACAGCAGTTGGTGGCAGGAAGTCAGGACAGGATTGGTaGAGTAGTCGTTGGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TCSLHGTAQHSTAVGGRKSGQDW*SSRWVQ Trigger: TTGAACCCAACGACTACTTCACCAATCCTGTCCTGA...CTTCCTGCCACCAACTGCTGTGCTGTGCTGTGCTGTGCCATGCAGACTACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGGCCCTGGTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGAGGCCTTGTCTGGCTCTaGTTTCATCTTGTACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VWPWCAQYKLKLYSTGQRGLVWL*FHLVRF Trigger: AAAACGTACAAGATGAAATCAGAGCCAGACAAGGCC...TCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTCTCCACTGTACAAGTTTAGCAAAGTAAGAAGGGAAAGGGGAGAGGAACTATGGCCTCCCCAGTaGAGTAGAGGACAGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QQSPLYKFSKVRRERGEELWPPQ*SRGQPV Trigger: CACGGGCTGTCCTCTACTTCACTGGGGAGGCCATAG...TTCCTCTCCCCTTTCCCTTCTTACTTTGCTAAACTTGTACAGTGGAGACTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAAGGCTGGTACAAGGCTaGATACTTCCTCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCTVQAEAVLHRPEIPSERLVQG*ILPLQV Trigger: GACCTGGAGAGGAAGTATGCAGCCTTGTACCAGCCT...TTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | TGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCCCAAGGGTTCATCATATTCCTaGACCAGCTCACTAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: CTQSQALSIPGTTSVHPKGSSYS*TSSLSM Trigger: CATGCTTAGTGAGCTGGTGCAGGAATATGATGAACC...CTTGGGGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAGTGCCCCGGCCCTTGTaGTTCTGCTTTTTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VCTVQAEAVLHRPEIPSEVPRPL*FCFFLM Trigger: CATCAAGAAAAAGCAGAAGCACAAGGGCCGGGGCAC...TTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR CCA 90 bp | AACTTCTGTCCCCTGGCTACAGCCTGCCAACTTCCAGCGGCAATAACATGTAGTACTCAGGGATGCCTTTaGGGTTCAGCTCTTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NFCPLATACQLPAAITCSTQGCL*GSALPL Trigger: CAGTGGAAGAGCTGAACCCCAAAGGCATCCCTGAGT...ACTACATGTTATTGCCGCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | CACAGCACTGTCAACAAAATTCTGCTTTGGCAGGGACTGAGGCCCCTGCCTGCGTCGTTGGGTTCAAAGTaGAACTCTAGCACAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSTVNKILLWQGLRPLPASLGSK*NSSTKD Trigger: GTCTTTTGTGCTAGAGTTTCACTTTGAACCCAACGA...CGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTTGACAGTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | GGCCAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGCCAATCGTTGGGTTCAAAGTaGAACTCTAGCACAAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GQRSLVKENFCPLATACQSLGSK*NSSTKD Trigger: GTCTTTTGTGCTAGAGTTTCACTTTGAACCCAACGA...TTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR CCA 90 bp | CACAGGCCAGAGATCCCTAGTGAAGGAGAACTTCTGTCCCCTGGCTACAGCCTGTTGTCAAATAGAGGCTaGTACAAGGCTGCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRPEIPSEGELLSPGYSLLSNRG*YKAAYF Trigger: GAAGTATGCAGCCTTGTACCAGCCTCTATTTGACAA...CAGGCTGTAGCCAGGGGACAGAAGTTCTCCTTCACTAGGGATCTCTGGCCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR CCA 90 bp | GGTCACCAAACCCAGGTGTGGCCCTGGTGTGCACAGTACAAGCTGAAGCTGTACTTGTCAAATAGAGGCTaGTACAAGGCTGCATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHQTQVWPWCAQYKLKLYLSNRG*YKAAYF Trigger: GAAGTATGCAGCCTTGTACCAGCCTCTATTTGACAA...GTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACACCTGGGTTTGGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | GAGAACTTCTGTCCCCTGGCTACAGCCTGCCAACTTCCAGCGGCAATAACATGTGCATCACCTGGTCTGTaGGTTTTTCTGTATTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENFCPLATACQLPAAITCASPGL*VFLYYW Trigger: CCAGTAATACAGAAAAACTCACAGACCAGGTGATGC...ACATGTTATTGCCGCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAGGCATCACCTGGTCTGTaGGTTTTTCTGTATTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CAQYKLKLYSTGQRSLVKASPGL*VFLYYW Trigger: CCAGTAATACAGAAAAACTCACAGACCAGGTGATGC...CTTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR GCA 90 bp | TGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAAGGGTTCATCATATTCCTaGACCAGCTCACTAAGCATG | + |
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Preference number: 4 (lower is better) Translates to: CAQYKLKLYSTGQRSLVKGSSYS*TSSLSM Trigger: CATGCTTAGTGAGCTGGTGCAGGAATATGATGAACC...CTTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR GCA 90 bp | CAGCAGTCTCCACTGTACAAGTTTAGCAAAGTAAGAAGGGAAAGGGGAGAGGAAACCAGAACTCAGGGATaGCTTTGGGGTTCAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQSPLYKFSKVRRERGEETRTQG*LWGSAL Trigger: AAGAGCTGAACCCCAAAGGCATCCCTGAGTTCTGGT...TTCCTCTCCCCTTTCCCTTCTTACTTTGCTAAACTTGTACAGTGGAGACTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGGAAAGGGGAGAGGAATCATGCACTTGGAAATGGTTAGATGTCACAGCACAGCTCTTCCACTGTTaGTGCTTCTTTCTCAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: RRERGEESCTWKWLDVTAQLFHC*CFFLSY Trigger: ATAGCTGAGAAAGAAGCAGCAACAGTGGAAGAGCTG...TGCTGTGACATCTAACCATTTCCAAGTGCATGATTCCTCTCCCCTTTCCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR GCA 90 bp | TCCTATTCTGAACTGCAGCAGTCTCCACTGTACAAGTTTAGCAAAGTAAGAAGGGGTTCATCATATTCCTaGACCAGCTCACTAAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SYSELQQSPLYKFSKVRRGSSYS*TSSLSM Trigger: CATGCTTAGTGAGCTGGTGCAGGAATATGATGAACC...CCTTCTTACTTTGCTAAACTTGTACAGTGGAGACTGCTGCAGTTCAGAATAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| 3UTR CAA 72 bp | CAAAGTAAGAAGGGAAAGGGGAGAGGAATCATGCACTaGGAAATGGTTAGATGTCACAGCACTGTCAACAAA | + |
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Preference number: 4 (lower is better) Translates to: QSKKGKGRGIMH*EMVRCHSTVNK Trigger: TTTGTTGACAGTGCTGTGACATCTAACCATTTCCAAGTGCATGATTCCTCTCCCCTTTCCCTTCTTACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | CCGGGTGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCACGGTGCCCCGGCCCTaGTGCTTCTGCTTTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PGAHNHRLCQSQAQPRSTTVPRP*CFCFFL Trigger: CAAGAAAAAGCAGAAGCACAAGGGCCGGGGCACCGT...GGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCACCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | GTGTGGCCCTGGTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGAACGGTGCCCCGGCCCTaGTGCTTCTGCTTTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: VWPWCAQYKLKLYSTGQRTVPRP*CFCFFL Trigger: CAAGAAAAAGCAGAAGCACAAGGGCCGGGGCACCGT...TCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | CACAGCACTGTCAACAAAATTCTGCTTTGGCAGGGACTGAGGCCCCTGCCTGCGACGGTGCCCCGGCCCTaGTGCTTCTGCTTTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: HSTVNKILLWQGLRPLPATVPRP*CFCFFL Trigger: CAAGAAAAAGCAGAAGCACAAGGGCCGGGGCACCGT...CGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTTGACAGTGCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | TGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCCCAAGAGGGGGCTGAAGAAGTaGAAGAAGGACTCATTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CTQSQALSIPGTTSVHPKRGLKK*KKDSLG Trigger: GCCCAATGAGTCCTTCTTCAACTTCTTCAGCCCCCT...CTTGGGGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | CTGGAGCAGCTTCCCACGCAGTTCAGCAGCTGGAAATCATGGGGCCTTGCCAGTTGGCTGGGTTCTTTCTaGGGGTTAACATCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LEQLPTQFSSWKSWGLASWLGSF*GLTSAS Trigger: TGATGCTGATGTTAACCCCAAGAAAGAACCCAGCCA...ACTGGCAAGGCCCCATGATTTCCAGCTGCTGAACTGCGTGGGAAGCTGCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS GCA 90 bp | TTCTTCATATCTCCAGCCAACTTGTCCTCCTCCTCATTCTCACTGTaGCACGCTGACTCTGCATCTGTGGGCTCCACGTCACCAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: FFISPANLSSSSFSL*HADSASVGSTSPVM Trigger: CATCACTGGTGACGTGGAGCCCACAGATGCAGAGTCAGCGTGGCACAGTGAGAATGAGGAGGAGGACAAGTTGGCTGGAGATATGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS GCA 90 bp | GGTTCATCATATTCAGCCAACTTGTCCTCCTCCTCATTCTCACTGTaGCACGCTGACTCTGCATCTGTGGGCTCCACGTCACCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GSSYSANLSSSSFSL*HADSASVGSTSPVM Trigger: CATCACTGGTGACGTGGAGCCCACAGATGCAGAGTCAGCGTGGCACAGTGAGAATGAGGAGGAGGACAAGTTGGCTGAATATGATGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208317.2 |
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| CDS-3UTR CAA 90 bp | TGCACACAATCACAGGCTCTGTCAATCCCAGGCACAACCTCGGTCCACCCCAAGTCAGCTCTTCCACTGTaGCTGCTTCTTTCTCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CTQSQALSIPGTTSVHPKSALPL*LLLSQL Trigger: TAGCTGAGAAAGAAGCAGCAACAGTGGAAGAGCTGA...CTTGGGGTGGACCGAGGTTGTGCCTGGGATTGACAGAGCCTGTGATTGTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | GGTCACCAAACCCAGGTGTGGCCCTGGTGTGCACAGTACAAGCTGAAGCTGTACTGGCTGGGTTCTTTCTaGGGGTTAACATCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GHQTQVWPWCAQYKLKLYWLGSF*GLTSAS Trigger: TGATGCTGATGTTAACCCCAAGAAAGAACCCAGCCA...GTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACACCTGGGTTTGGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | GGTCACCAAACCCAGGTGTGGCCCTGGTGTGCACAGTACAAGCTGAAGCTGTACCTTTCTTCCAGTCTATaGTACACCCATCACAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GHQTQVWPWCAQYKLKLYLSSSL*YTHHSP Trigger: TGGACTGTGATGGGTGTACAATAGACTGGAAGAAAG...GTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACACCTGGGTTTGGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS TCA 90 bp | ATATTCAGCCAACTTGTCCTCCTCCTCATTCTCACTGTGCCACGCTaGCTCTGCATCTGTGGGCTCCACGTCACCAGTGATGAATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IFSQLVLLLILTVPR*LCICGLHVTSDEFS Trigger: AGAGAATTCATCACTGGTGACGTGGAGCCCACAGATGCAGAGTCAGCGTGGCACAGTGAGAATGAGGAGGAGGACAAGTTGGCTGAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208317.2 |
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| CDS-3UTR CAA 90 bp | ACCAACTGGTCACCAAACCCAGGTGTGGCCCTGGTGTGCACAGTACAAGCTGAACTTTCTTCCAGTCTATaGTACACCCATCACAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TNWSPNPGVALVCTVQAELSSSL*YTHHSP Trigger: TGGACTGTGATGGGTGTACAATAGACTGGAAGAAAG...TTCAGCTTGTACTGTGCACACCAGGGCCACACCTGGGTTTGGTGACCAGTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | GTGTGGCCCTGGTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGAATGAATTCTCTTCTCTaGTCAAATAGAGGCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: VWPWCAQYKLKLYSTGQRMNSLL*SNRGWY Trigger: GTACCAGCCTCTATTTGACAAGAGAAGAGAATTCAT...TCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACACCAGGGCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | CACAGCACTGTCAACAAAATTCTGCTTTGGCAGGGACTGAGGCCCCTGCCTGCGATGAATTCTCTTCTCTaGTCAAATAGAGGCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: HSTVNKILLWQGLRPLPAMNSLL*SNRGWY Trigger: GTACCAGCCTCTATTTGACAAGAGAAGAGAATTCAT...CGCAGGCAGGGGCCTCAGTCCCTGCCAAAGCAGAATTTTGTTGACAGTGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | AACTTCTGTCCCCTGGCTACAGCCTGCCAACTTCCAGCGGCAATAACATGTAGTTCAGCTCTTCCACTGTaGCTGCTTCTTTCTCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NFCPLATACQLPAAITCSSALPL*LLLSQL Trigger: TAGCTGAGAAAGAAGCAGCAACAGTGGAAGAGCTGA...ACTACATGTTATTGCCGCTGGAAGTTGGCAGGCTGTAGCCAGGGGACAGAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | GTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAATCAGCTCTTCCACTGTaGCTGCTTCTTTCTCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VCTVQAEAVLHRPEIPSESALPL*LLLSQL Trigger: TAGCTGAGAAAGAAGCAGCAACAGTGGAAGAGCTGA...TTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | GTGTGCACAGTACAAGCTGAAGCTGTACTCCACAGGCCAGAGATCCCTAGTGAACTTTCTTCCAGTCTATaGTACACCCATCACAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VCTVQAEAVLHRPEIPSELSSSL*YTHHSP Trigger: TGGACTGTGATGGGTGTACAATAGACTGGAAGAAAG...TTCACTAGGGATCTCTGGCCTGTGGAGTACAGCTTCAGCTTGTACTGTGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGTCTCCACTGTACAAGTTTAGCAAAGTAAGAAGGGAAAGGGGAGAGGAAAGGGGGCTGAAGAAGTaGAAGAAGGACTCATTGGGC | + |
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Preference number: 5 (lower is better) Translates to: QQSPLYKFSKVRRERGEERGLKK*KKDSLG Trigger: GCCCAATGAGTCCTTCTTCAACTTCTTCAGCCCCCT...TTCCTCTCCCCTTTCCCTTCTTACTTTGCTAAACTTGTACAGTGGAGACTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS-3UTR CAA 90 bp | AAGGGAAAGGGGAGAGGAATCATGCACTTGGAAATGGTTAGATGTCACAGCACTAGGGGGCTGAAGAAGTaGAAGAAGGACTCATTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGKGRGIMHLEMVRCHSTRGLKK*KKDSLG Trigger: GCCCAATGAGTCCTTCTTCAACTTCTTCAGCCCCCT...AGTGCTGTGACATCTAACCATTTCCAAGTGCATGATTCCTCTCCCCTTTCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS GCA 90 bp | CCAGAACTCAGGGATGCCTTTGGGGTTCAGCTCTTCCACTGTTGCTaGTTCTTTCTCAGCTATGACTACTTTATTCTTCATATCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PELRDAFGVQLFHCC*FFLSYDYFILHISS Trigger: GCTGGAGATATGAAGAATAAAGTAGTCATAGCTGAGAAAGAAGCAGCAACAGTGGAAGAGCTGAACCCCAAAGGCATCCCTGAGTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS GCA 72 bp | AGACGTTCCTGCAAAGCTGCCAGCACTTGTGGGTTCTaGATCACCTGGTCTGTGAGTTTTTCTGTATTACTG | + |
|
Preference number: 6 (lower is better) Translates to: RRSCKAASTCGF*ITWSVSFSVLL Trigger: CAGTAATACAGAAAAACTCACAGACCAGGTGATGCAGAACCCACAAGTGCTGGCAGCTTTGCAGGAACGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072727.7 ENSMUST00000208093.2 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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| CDS GCA 72 bp | CTCAGGGATGCCTTTGGGGTTCAGCTCTTCCACTGTTaGTGCTTCTTTCTCAGCTATGACTACTTTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: LRDAFGVQLFHC*CFFLSYDYFIL Trigger: AAGAATAAAGTAGTCATAGCTGAGAAAGAAGCAGCAACAGTGGAAGAGCTGAACCCCAAAGGCATCCCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072727.7 ENSMUST00000208190.2 ENSMUST00000209098.2 |
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