Pregenerated sensors for NAP1L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000082229Ensembl transcript IDs: ENSMUST00000121720.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATCACAGTCTACATGTCTaGAAAACATCATACCACTAC | + |
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Preference number: 3 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYHSLHV*KTSYHY Trigger: GTAGTGGTATGATGTTTTCAAGACATGTAGACTGTG...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| 3UTR CCA 72 bp | TCTAATAATATTCACAGCCACAGATTAATAGATACATaGCACAAGGACTTCAGAAGGGTTATACTACAGACT | + |
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Preference number: 3 (lower is better) Translates to: SNNIHSHRLIDT*HKDFRRVILQT Trigger: AGTCTGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTGTGAATATTATTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR CCA 90 bp | CAGCCACAGATTAATAGATACATGGCACAAGGACTTCAGAAGGGTTATACTACACCTCTTCTCCTCCGGTaGCCCCAGCGCTGTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: QPQINRYMAQGLQKGYTTPLLLR*PQRCHL Trigger: AAGATGACAGCGCTGGGGCCACCGGAGGAGAAGAGG...TGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR GCA 90 bp | CAGCCACAGATTAATAGATACATGGCACAAGGACTTCAGAAGGGTTATACTACATGGAGACACCTTCACTaGGGTCCTGACTTTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: QPQINRYMAQGLQKGYTTWRHLH*GPDFPR Trigger: CCGGGGAAAGTCAGGACCGCAGTGAAGGTGTCTCCA...TGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR CCA 90 bp | CAGCCACAGATTAATAGATACATGGCACAAGGACTTCAGAAGGGTTATACTACACAGTGGCGTACTCAATaGCAGTTCCCCTATAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: QPQINRYMAQGLQKGYTTQWRTQ*QFPYKG Trigger: ACCCTTATAGGGGAACTGCCATTGAGTACGCCACTG...TGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR GCA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATCCGCCATTACCTGGCTaGCAAGCTCTTCTTGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYPPLPG*QALLGW Trigger: CCAACCAAGAAGAGCTTGGCAGCCAGGTAATGGCGG...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR GCA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATCTGAGTCCTCATCAGTaGCTCCGCACTTCCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYLSPHQ*LRTSQH Trigger: ATGCTGGGAAGTGCGGAGGCACTGATGAGGACTCAG...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR GCA 90 bp | CAGCCACAGATTAATAGATACATGGCACAAGGACTTCAGAAGGGTTATACTACACAGACGCGATGTCTCTaGTTCTTCTTGATGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPQINRYMAQGLQKGYTTQTRCL*FFLMVL Trigger: GAGAACCATCAAGAAGAAGCAGAGACATCGCGTCTG...TGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR TCA 90 bp | CAGCCACAGATTAATAGATACATGGCACAAGGACTTCAGAAGGGTTATACTACATGGGCAGCTCTTGTTTaGAGCTTTTTAAGAGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: QPQINRYMAQGLQKGYTTWAALV*SFLRAS Trigger: GCTAGCTCTTAAAAAGCTTCAAACAAGAGCTGCCCA...TGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR CCA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATCATCTCCAGGCTCAATaGAGACACCTTCACTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYHLQAQ*RHLHCG Trigger: ACCGCAGTGAAGGTGTCTCCATTGAGCCTGGAGATG...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR TCA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATCCCCTCCATTTAAGCTaGTCCCATGAGGAGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYPLHLS*SHEERR Trigger: TCTTCTCTCCTCATGGGATCAGCTTAAATGGAGGGG...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR GCA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATATCTTCCCCAGACCCTaGAGCAGCTTCTTCACCTTT | + |
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Preference number: 4 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYIFPRP*SSFFTF Trigger: AAAGGTGAAGAAGCTGCTGCAGGGTCTGGGGAAGAT...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR TCA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATGTAGCATGCAAGCTTTaGCTTCAGCACATAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYVACKL*LQHISL Trigger: AAGACTTATGTGCTGAAGTCAAAGCTTGCATGCTAC...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR CCA 90 bp | CAGCCACAGATTAATAGATACATGGCACAAGGACTTCAGAAGGGTTATACTACATTTTCTAGTAAGGGTTaGTACATTTCAGCAAACTTC | + |
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Preference number: 4 (lower is better) Translates to: QPQINRYMAQGLQKGYTTFSSKG*YISANF Trigger: GAAGTTTGCTGAAATGTACCAACCCTTACTAGAAAA...TGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR TCA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATTTTAAGCTGATCCCATaGGGAGAGAAGAAATTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYFKLIP*GEKKLK Trigger: CTTCAATTTCTTCTCTCCTCATGGGATCAGCTTAAA...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR TCA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATTTCCTTTCAATGTCATaGAATTCCCTCAGGAATTTG | + |
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Preference number: 4 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYFLSMS*NSLRNL Trigger: CAAATTCCTGAGGGAATTTCATGACATTGAAAGGAA...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS GCA 90 bp | CACCATGTTGCCCGCCATCTCCAGGCTCAATGGAGACACCTTCACTaGGGTCCTGACTTTCCCCGGGCCCCTCCGCCATTACCTGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HHVARHLQAQWRHLH*GPDFPRAPPPLPGC Trigger: GCAGCCAGGTAATGGCGGAGGGGCCCGGGGAAAGTCAGGACCGCAGTGAAGGTGTCTCCATTGAGCCTGGAGATGGCGGGCAACATGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS GCA 90 bp | CACTGCGGTCCTGACTTTCCCCGGGCCCCTCCGCCATTACCTGGCTaGCAAGCTCTTCTTGGTTGGATTCAGACAGTTCTTTATGGTCGA | + |
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Preference number: 5 (lower is better) Translates to: HCGPDFPRAPPPLPG*QALLGWIQTVLYGR Trigger: TCGACCATAAAGAACTGTCTGAATCCAACCAAGAAGAGCTTGGCAGCCAGGTAATGGCGGAGGGGCCCGGGGAAAGTCAGGACCGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS CCA 90 bp | TCTTCCCTTCGTTCCAATCTATGTCGCAGCCAGTGGCGTACTCAATaGCAGTTCCCCTATAAGGGTGGGGATCGTAGCATGCAAGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SSLRSNLCRSQWRTQ*QFPYKGGDRSMQAL Trigger: CAAAGCTTGCATGCTACGATCCCCACCCTTATAGGGGAACTGCCATTGAGTACGCCACTGGCTGCGACATAGATTGGAACGAAGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR CAA 90 bp | CAGCCACAGATTAATAGATACATGGCACAAGGACTTCAGAAGGGTTATACTACAGGTTTCTTCACCATGTaGCCCGCCATCTCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: QPQINRYMAQGLQKGYTTGFFTM*PAISRL Trigger: GAGCCTGGAGATGGCGGGCAACATGGTGAAGAAACC...TGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR CAA 90 bp | CAGCCACAGATTAATAGATACATGGCACAAGGACTTCAGAAGGGTTATACTACAAATTCCCTCAGGAATTaGGATTCCAAATGGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: QPQINRYMAQGLQKGYTTNSLRN*DSKWAA Trigger: AGCTGCCCATTTGGAATCCAAATTCCTGAGGGAATT...TGTAGTATAACCCTTCTGAAGTCCTTGTGCCATGTATCTATTAATCTGTGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS TCA 90 bp | TTGTCATATATTTCGTCATTAACTTCCCTAACTACACCCTCCTGCTaGGATTCAAGTGCATCTCCTGAGAAAAATAACACTGATCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: LSYISSLTSLTTPSC*DSSASPEKNNTDLG Trigger: TCCAAGATCAGTGTTATTTTTCTCAGGAGATGCACTTGAATCTCAGCAGGAGGGTGTAGTTAGGGAAGTTAATGACGAAATATATGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR CAA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATCGTAGCATGCAAGCTTaGACTTCAGCACATAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYRSMQA*TSAHKS Trigger: AGACTTATGTGCTGAAGTCAAAGCTTGCATGCTACG...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS-3UTR CAA 90 bp | TCTCAATCATATGCAGGCCTCTTAGGCATTCAAGTTTTAAATTCTACTGCATATAATGCCTCAAGATTTTaGCAACAGGCTTTAACCTCT | + |
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Preference number: 5 (lower is better) Translates to: SQSYAGLLGIQVLNSTAYNASRF*QQALTS Trigger: AGAGGTTAAAGCCTGTTGCAAAAATCTTGAGGCATT...ATATGCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS GCA 72 bp | GCCCGCCATCTCCAGGCTCAATGGAGACACCTTCACTaGGGTCCTGACTTTCCCCGGGCCCCTCCGCCATTA | + |
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Preference number: 6 (lower is better) Translates to: ARHLQAQWRHLH*GPDFPRAPPPL Trigger: TAATGGCGGAGGGGCCCGGGGAAAGTCAGGACCGCAGTGAAGGTGTCTCCATTGAGCCTGGAGATGGCGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS CAA 90 bp | TTTTCCCTCTTCCCCTACTCCAGCAGCCACGGTTTCTTCACCATGTaGCCCGCCATCTCCAGGCTCAATGGAGACACCTTCACTGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: FSLFPYSSSHGFFTM*PAISRLNGDTFTAV Trigger: GACCGCAGTGAAGGTGTCTCCATTGAGCCTGGAGATGGCGGGCAACATGGTGAAGAAACCGTGGCTGCTGGAGTAGGGGAAGAGGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS GCA 72 bp | CCTGACTTTCCCCGGGCCCCTCCGCCATTACCTGGCTaGCAAGCTCTTCTTGGTTGGATTCAGACAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PDFPRAPPPLPG*QALLGWIQTVL Trigger: AAGAACTGTCTGAATCCAACCAAGAAGAGCTTGGCAGCCAGGTAATGGCGGAGGGGCCCGGGGAAAGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS CAA 72 bp | TTCCCCTACTCCAGCAGCCACGGTTTCTTCACCATGTaGCCCGCCATCTCCAGGCTCAATGGAGACACCTTC | + |
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Preference number: 6 (lower is better) Translates to: FPYSSSHGFFTM*PAISRLNGDTF Trigger: GAAGGTGTCTCCATTGAGCCTGGAGATGGCGGGCAACATGGTGAAGAAACCGTGGCTGCTGGAGTAGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS CCA 72 bp | CGTTCCAATCTATGTCGCAGCCAGTGGCGTACTCAATaGCAGTTCCCCTATAAGGGTGGGGATCGTAGCATG | + |
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Preference number: 6 (lower is better) Translates to: RSNLCRSQWRTQ*QFPYKGGDRSM Trigger: CATGCTACGATCCCCACCCTTATAGGGGAACTGCCATTGAGTACGCCACTGGCTGCGACATAGATTGGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS CCA 72 bp | GGCCCCTCCGCCATTACCTGGCTGCCAAGCTCTTCTTaGTTGGATTCAGACAGTTCTTTATGGTCGACTGAT | + |
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Preference number: 6 (lower is better) Translates to: GPSAITWLPSSS*LDSDSSLWSTD Trigger: ATCAGTCGACCATAAAGAACTGTCTGAATCCAACCAAGAAGAGCTTGGCAGCCAGGTAATGGCGGAGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS CAA 72 bp | TCTTCATCCACGTATTCATGCACCATACCGTCTTCGTaGCCGTTAGTCTCTTCCTCCTCATCCATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSTYSCTIPSS*PLVSSSSSISS Trigger: GGAGGAGATGGATGAGGAGGAAGAGACTAACGGCAACGAAGACGGTATGGTGCATGAATACGTGGATGAAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS TCA 72 bp | TCCCCTATAAGGGTGGGGATCGTAGCATGCAAGCTTTaGCTTCAGCACATAAGTCTTTGTCAACAGCTCATT | + |
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Preference number: 6 (lower is better) Translates to: SPIRVGIVACKL*LQHISLCQQLI Trigger: AATGAGCTGTTGACAAAGACTTATGTGCTGAAGTCAAAGCTTGCATGCTACGATCCCCACCCTTATAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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| CDS TCA 72 bp | ATTTCGTCATTAACTTCCCTAACTACACCCTCCTGCTaGGATTCAAGTGCATCTCCTGAGAAAAATAACACT | + |
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Preference number: 6 (lower is better) Translates to: ISSLTSLTTPSC*DSSASPEKNNT Trigger: AGTGTTATTTTTCTCAGGAGATGCACTTGAATCTCAGCAGGAGGGTGTAGTTAGGGAAGTTAATGACGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121720.2 |
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