Pregenerated sensors for NANS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028334Ensembl transcript IDs: ENSMUST00000030018.5
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCTCTGTCCCTGCCTTCGCTCACAGAGTTGGGAGAGCTTGTCTCTaGCCACAGGGGCTCAGGCAGAGTCTAATGCCCACCGTTCGGTGC | + |
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Preference number: 1 (lower is better) Translates to: RSVPAFAHRVGRACL*PQGLRQSLMPTVRC Trigger: GCACCGAACGGTGGGCATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTGAGCGAAGGCAGGGACAGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 90 bp | CTTCCCAATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCCTaGAGACTGACATTCCTGCCCCTCTGCACCCAACACACTGGACAG | + |
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Preference number: 1 (lower is better) Translates to: LPNGLDTGGHCDRVA*RLTFLPLCTQHTGQ Trigger: CTGTCCAGTGTGTTGGGTGCAGAGGGGCAGGAATGTCAGTCTCCAGGCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 90 bp | TGTCAACAGAGCCACACAGAGACCCTAAAGGAGCTGCATGTGCTCTaGGCCACCTTCTCTGGCTGGACGCTCCGAAGCACAACAGCCTCG | + |
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Preference number: 1 (lower is better) Translates to: CQQSHTETLKELHVL*ATFSGWTLRSTTAS Trigger: CGAGGCTGTTGTGCTTCGGAGCGTCCAGCCAGAGAAGGTGGCCCAGAGCACATGCAGCTCCTTTAGGGTCTCTGTGTGGCTCTGTTGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 90 bp | CCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTaGGTTAGTGTGCACCTGATGTCTGAGGACAGGCCTCTGAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: PIPLLTAASAWPTVP*VSVHLMSEDRPLRK Trigger: CTTTCTCAGAGGCCTGTCCTCAGACATCAGGTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 90 bp | TGTTCCTCCCTGCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTaGCCAACTGTACCGTGGGTTAGTGTGCACCTGATGTCTGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: CSSLLPIPLLTAASA*PTVPWVSVHLMSED Trigger: GTCCTCAGACATCAGGTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGCAGGGAGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCACCTGGGCCACCTTCTCTaGCTGGACGCTCCGAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: PLLTAASAWPTVPWVSVHLGHLL*LDAPKH Trigger: GTGCTTCGGAGCGTCCAGCCAGAGAAGGTGGCCCAG...GTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCACTGCTCTATGAGGAGCTaGGAGCTCAGGTCCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PLLTAASAWPTVPWVSVHCSMRS*ELRSLE Trigger: CTCCAGGGACCTGAGCTCTCAGCTCCTCATAGAGCA...GTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR TCA 90 bp | GCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTCTGAGGACAGGCCTCTaGGAAAGGGACTGGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: ASHSPSHSCLCLANCTVGLRTGL*ERDWLL Trigger: TAGCAGCCAGTCCCTTTCTCAGAGGCCTGTCCTCAG...ACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCTGCGACAGGGTGGCCTaGAGACTGACATTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: FPFSQLPLLGQLYRGLVCCDRVA*RLTFLP Trigger: GGGCAGGAATGTCAGTCTCCAGGCCACCCTGTCGCA...GCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCACGCACAACAGCCTCGTTaGCTCCTCCTTCCCAATGGG | + |
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Preference number: 2 (lower is better) Translates to: PLLTAASAWPTVPWVSVHAQQPR*LLLPNG Trigger: CCCATTGGGAAGGAGGAGCCAACGAGGCTGTTGTGC...GTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCTGCCTTCGCTCACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCGAGAGCTCAGGTCCCTaGAGTTGCTTTGTAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LSLPSLTELGELVSAHRGESSGP*SCFVEW Trigger: CCACTCTACAAAGCAACTCCAGGGACCTGAGCTCTC...GCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTGAGCGAAGGCAGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR TCA 90 bp | CAGTCGGGTATACAGGGTGAGTTCCAGGCCAGCCAGGATAGAGTGAGATCTTATCCCCCATGGTTAAGATaGACAAGCTCCACCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QSGIQGEFQASQDRVRSYPPWLR*TSSTPS Trigger: GGAGGGGGTGGAGCTTGTTCATCTTAACCATGGGGG...ATAAGATCTCACTCTATCCTGGCTGGCCTGGAACTCACCCTGTATACCCGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR GCA 90 bp | CAGTCGGGTATACAGGGTGAGTTCCAGGCCAGCCAGGATAGAGTGAGATCTTATACCCGTGTTCCTCCCTaGTTCCCATTCCCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: QSGIQGEFQASQDRVRSYTRVPP*FPFPFS Trigger: TGAGAAGGGGAATGGGAAGCAGGGAGGAACACGGGT...ATAAGATCTCACTCTATCCTGGCTGGCCTGGAACTCACCCTGTATACCCGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 72 bp | GGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCCTaGAGACTGACATTCCTGCCCCTCTGCACCCAACAC | + |
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Preference number: 3 (lower is better) Translates to: GLDTGGHCDRVA*RLTFLPLCTQH Trigger: GTGTTGGGTGCAGAGGGGCAGGAATGTCAGTCTCCAGGCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR TCA 72 bp | ACACAGGTGGCCACTGCGACAGGGTGGCCTGGAGACTaGCATTCCTGCCCCTCTGCACCCAACACACTGGAC | + |
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Preference number: 3 (lower is better) Translates to: TQVATATGWPGD*HSCPSAPNTLD Trigger: GTCCAGTGTGTTGGGTGCAGAGGGGCAGGAATGTCAGTCTCCAGGCCACCCTGTCGCAGTGGCCACCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR GCA 72 bp | CTCCTCCTTCCCAATGGGCTAGACACAGGTGGCCACTaGGACAGGGTGGCCTGGAGACTGACATTCCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: LLLPNGLDTGGH*DRVAWRLTFLP Trigger: GGGCAGGAATGTCAGTCTCCAGGCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 72 bp | CGAAGCACAACAGCCTCGTTGGCTCCTCCTTCCCAATaGGCTAGACACAGGTGGCCACTGCGACAGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: RSTTASLAPPSQ*ARHRWPLRQGG Trigger: GCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAGGAGCCAACGAGGCTGTTGTGCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCCTGCCTTCGCTCACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCAGCACAACAGCCTCGTaGGCTCCTCCTTCCCAATGG | + |
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Preference number: 3 (lower is better) Translates to: LSLPSLTELGELVSAHRGSTTAS*APPSQW Trigger: CCATTGGGAAGGAGGAGCCAACGAGGCTGTTGTGCT...GCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTGAGCGAAGGCAGGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 72 bp | AAGGAGCTGCATGTGCTCTGGGCCACCTTCTCTGGCTaGACGCTCCGAAGCACAACAGCCTCGTTGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: KELHVLWATFSG*TLRSTTASLAP Trigger: AGGAGCCAACGAGGCTGTTGTGCTTCGGAGCGTCCAGCCAGAGAAGGTGGCCCAGAGCACATGCAGCTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 72 bp | CCTAAAGGAGCTGCATGTGCTCTGGGCCACCTTCTCTaGCTGGACGCTCCGAAGCACAACAGCCTCGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: PKGAACALGHLL*LDAPKHNSLVG Trigger: GCCAACGAGGCTGTTGTGCTTCGGAGCGTCCAGCCAGAGAAGGTGGCCCAGAGCACATGCAGCTCCTTTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 72 bp | CTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTaGGTTAGTGTGCACCTGATGTCTGAGGACAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LLTAASAWPTVP*VSVHLMSEDRP Trigger: AGGCCTGTCCTCAGACATCAGGTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR CAA 90 bp | CAGTCGGGTATACAGGGTGAGTTCCAGGCCAGCCAGGATAGAGTGAGATCTTATCAGAGTTGGGAGAGCTaGTCTCTGCCCACAGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: QSGIQGEFQASQDRVRSYQSWES*SLPTGA Trigger: AGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTG...ATAAGATCTCACTCTATCCTGGCTGGCCTGGAACTCACCCTGTATACCCGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR TCA 72 bp | AGTCTAATGCCCACCGTTCGGTGCTCTATGAGGAGCTaGGAGCTCAGGTCCCTGGAGTTGCTTTGTAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLMPTVRCSMRS*ELRSLELLCRV Trigger: CACTCTACAAAGCAACTCCAGGGACCTGAGCTCTCAGCTCCTCATAGAGCACCGAACGGTGGGCATTAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR TCA 72 bp | CTCAGGTCCCTGGAGTTGCTTTGTAGAGTGGGAAGTTaGAGGCTGAAGATGTCAACAGAGCCACACAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: LRSLELLCRVGS*RLKMSTEPHRD Trigger: GTCTCTGTGTGGCTCTGTTGACATCTTCAGCCTTCAACTTCCCACTCTACAAAGCAACTCCAGGGACCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR TCA 72 bp | CCCTGGAGTTGCTTTGTAGAGTGGGAAGTTGAAGGCTaGAGATGTCAACAGAGCCACACAGAGACCCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: PWSCFVEWEVEG*RCQQSHTETLK Trigger: CTTTAGGGTCTCTGTGTGGCTCTGTTGACATCTTCAGCCTTCAACTTCCCACTCTACAAAGCAACTCCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR TCA 72 bp | ATAGCACCTTTGTCTGGGTTTGTAATCTGTCATATGTaGCAAGACCCTGGTGCTTACGGCAGGGCTGATGTC | + |
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Preference number: 3 (lower is better) Translates to: IAPLSGFVICHM*QDPGAYGRADV Trigger: GACATCAGCCCTGCCGTAAGCACCAGGGTCTTGTCACATATGACAGATTACAAACCCAGACAAAGGTGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR-3UTR CAA 90 bp | TTCATGCCCTTAAACAAGTCAAACAATAGCACCTTTGTCTGGGTTTGTAATCTGCTCAGGTCCCTGGAGTaGCTTTGTAGAGTGGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: FMPLNKSNNSTFVWVCNLLRSLE*LCRVGS Trigger: ACTTCCCACTCTACAAAGCAACTCCAGGGACCTGAG...CAGATTACAAACCCAGACAAAGGTGCTATTGTTTGACTTGTTTAAGGGCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CCA 72 bp | ATGCCCTTAAACAAGTCAAACAATAGCACCTTTGTCTaGGTTTGTAATCTGTCATATGTGACAAGACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: MPLNKSNNSTFV*VCNLSYVTRPW Trigger: CCAGGGTCTTGTCACATATGACAGATTACAAACCCAGACAAAGGTGCTATTGTTTGACTTGTTTAAGGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | TTGGCTCCTCCTTCCCAATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCGACGTTCCAACACCTTaGCCCCCAGAGCCACGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LAPPSQWARHRWPLRQGGDVPTP*PPEPRR Trigger: CCGCCGTGGCTCTGGGGGCCAAGGTGTTGGAACGTC...GCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAGGAGCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CAA 72 bp | GGGGTGAACGCTCTGTCCCTGCCTTCGCTCACAGAGTaGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GVNALSLPSLTE*GELVSAHRGSG Trigger: GCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTGAGCGAAGGCAGGGACAGAGCGTTCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | GCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTCAGCAGCTGCTTGGTTaGGGAGCCCAGGGCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASHSPSHSCLCLANCTVGQQLLG*GAQGPL Trigger: GAGCGGGCCCTGGGCTCCCCAACCAAGCAGCTGCTG...ACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | AATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCCTGGAGACTGACATTCAGGGCAGCAGCTGCTTaGTTGGGGAGCCCAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NGLDTGGHCDRVAWRLTFRAAAA*LGSPGP Trigger: GGGCCCTGGGCTCCCCAACCAAGCAGCTGCTGCCCT...GAATGTCAGTCTCCAGGCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | GCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTCGGCGGCCACAGATATaGCGATGCCCGTCTCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: ASHSPSHSCLCLANCTVGRRPQI*RCPSRA Trigger: GGCACGAGACGGGCATCGCCATATCTGTGGCCGCCG...ACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR TCA 90 bp | CCTCCCTGCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCCCCCACCTTCACAGTaGGCATGTCCAGGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PPCFPFPFSQLPLLGQLYPPPSQ*ACPGSG Trigger: CCCTGACCCTGGACATGCTCACTGTGAAGGTGGGGG...GTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGCAGGGAGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | CTGTCCCTGCCTTCGCTCACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCCAGATGCCGCTTGTaGTCCCCATACGTCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LSLPSLTELGELVSAHRGSRCRL*SPYVFP Trigger: GGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGA...GCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTGAGCGAAGGCAGGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | CCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCACTCACAGGGCAGCAGCTaGTTGGTTGGGGAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLLTAASAWPTVPWVSVHSQGSS*LVGEPR Trigger: CCTGGGCTCCCCAACCAAGCAGCTGCTGCCCTGTGA...GTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGAGGCTCCAGCGAGGCTaGGTGGTCACTCCCCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HRVGRACLCPQGLRQSLMRLQRG*VVTPLP Trigger: TGGAAGGGGAGTGACCACTCAGCCTCGCTGGAGCCT...CATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR TCA 90 bp | TTGGCTCCTCCTTCCCAATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCCTTCATGGTGTCCATTaGCTGCATCCCGCTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: LAPPSQWARHRWPLRQGGLHGVH*LHPAGD Trigger: ATCTCCAGCGGGATGCAGTCAATGGACACCATGAAG...GCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAGGAGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGTCCAGCGAGGCTGAGTaGTCACTCCCCTTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: HRVGRACLCPQGLRQSLMSSEAE*SLPFQV Trigger: GACCTGGAAGGGGAGTGACCACTCAGCCTCGCTGGA...CATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGCCCACCAGGAGGATAGCCTTTaGGCTCCCCCACCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: SWESLSLPTGAQAESNAHQEDSL*APPPSQ Trigger: CTGTGAAGGTGGGGGAGCCCAAAGGCTATCCTCCTG...GTGGGCATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | AATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCCTGGAGACTGACATTCGGTCAGGGTGGTGCCTaGTGGGATTTTCACTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: NGLDTGGHCDRVAWRLTFGQGGA*WDFHFG Trigger: GCCAAAGTGAAAATCCCAGCAGGCACCACCCTGACC...GAATGTCAGTCTCCAGGCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | CCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCACTCTATGTCTCCTTGGTaGTTCTGGCCGATCTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: PLLTAASAWPTVPWVSVHSMSPW*FWPISA Trigger: CGCGGAGATCGGCCAGAACCACCAAGGAGACATAGA...GTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | TTGGCTCCTCCTTCCCAATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCATGCTTCGAAGTATATaGTCTCTCCAGGGCCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: LAPPSQWARHRWPLRQGGMLRSI*SLQGLP Trigger: CGGAAGGCCCTGGAGAGACCATATACTTCGAAGCAT...GCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAGGAGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| 3UTR CAA 72 bp | CTCTGTCCCTGCCTTCGCTCACAGAGTTGGGAGAGCTaGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAAT | + |
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Preference number: 4 (lower is better) Translates to: LCPCLRSQSWES*SLPTGAQAESN Trigger: ATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTGAGCGAAGGCAGGGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR TCA 90 bp | CACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGCCATGCCAGAGGCAGTaGAGAAGATGCCGATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HRVGRACLCPQGLRQSLMPCQRQ*RRCRSP Trigger: AGGAGATCGGCATCTTCTTCACTGCCTCTGGCATGG...CATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR TCA 90 bp | TTGGCTCCTCCTTCCCAATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCTTTTGCCCGCTAGGTTaGAGATGTCTTCAGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LAPPSQWARHRWPLRQGGFCPLG*RCLQED Trigger: ATCCTCCTGAAGACATCTTCAACCTAGCGGGCAAAA...GCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAGGAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | GCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTGGCTGAATTCCAGATaGCGCTTGTGCTCCCCATAC | + |
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Preference number: 4 (lower is better) Translates to: ASHSPSHSCLCLANCTVGWLNSR*RLCSPY Trigger: GTATGGGGAGCACAAGCGGCATCTGGAATTCAGCCA...ACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | CACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGGTGGGTACGCGCTGGTaGATTGGAGGAAGCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: HRVGRACLCPQGLRQSLMVGTRW*IGGSRS Trigger: ACTTCTGCTTCCTCCAATGCACCAGCGCGTACCCAC...CATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | GCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTGGCTACCACAGACTTaGCGAGCTTCTCATTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASHSPSHSCLCLANCTVGWLPQT*RASHCR Trigger: CCTGCAATGAGAAGCTCGGCAAGTCTGTGGTAGCCA...ACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | CACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGCCAGGGTCAGGGTGGTaGCTGCTGGGATTTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HRVGRACLCPQGLRQSLMPGSGW*LLGFSL Trigger: AAGTGAAAATCCCAGCAGGCACCACCCTGACCCTGG...CATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGCCCACGGAGGAAGCAGAAGTTaGGATTCAGCGGCTTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SWESLSLPTGAQAESNAHGGSRS*DSAASR Trigger: TCGTGAAGCCGCTGAATCCCAACTTCTGCTTCCTCC...GTGGGCATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR TCA 90 bp | CTGTCCCTGCCTTCGCTCACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCATACGTCTTCCCCCATaGATGCTTCGAAGTATATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSLTELGELVSAHRGIRLPP*MLRSIW Trigger: CCATATACTTCGAAGCATTCATGGGGGAAGACGTAT...GCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTGAGCGAAGGCAGGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR TCA 90 bp | CCTCCCTGCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACTTGTCCAACGTTATGTaGCGTTCCAACACCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPCFPFPFSQLPLLGQLYLSNVM*RSNTLA Trigger: GGCCAAGGTGTTGGAACGTCACATAACGTTGGACAA...GTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGCAGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | CTGTCCCTGCCTTCGCTCACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCGTCTTCCCCCATGAATaGTTCGAAGTATATGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSLTELGELVSAHRGVFPHE*FEVYGL Trigger: GAGACCATATACTTCGAAGCATTCATGGGGGAAGAC...GCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTGAGCGAAGGCAGGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | TTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCATGGTGTCCATTGACTaGATCCCGCTGGAGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: FPFSQLPLLGQLYRGLVCMVSID*IPLEIT Trigger: GGTGATCTCCAGCGGGATGCAGTCAATGGACACCAT...GCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | CCTCCCTGCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACTGCGGATCATGCGCTTaGCCACATCTATGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPCFPFPFSQLPLLGQLYCGSCA*PHLCLL Trigger: AAGGAGACATAGATGTGGCCAAGCGCATGATCCGCA...GTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGCAGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | TTGGCTCCTCCTTCCCAATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCGATAGACTTGCTTCATaGTGTCCATTGACTGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LAPPSQWARHRWPLRQGGDRLAS*CPLTAS Trigger: GGATGCAGTCAATGGACACCATGAAGCAAGTCTATC...GCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAGGAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR TCA 90 bp | TTGGCTCCTCCTTCCCAATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCTTGATTTTCTTGCTGTaGCTTTCCACGGATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAPPSQWARHRWPLRQGGLIFLL*LSTDSS Trigger: GGAAGAATCCGTGGAAAGTCACAGCAAGAAAATCAA...GCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAGGAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | CAGTCGGGTATACAGGGTGAGTTCCAGGCCAGCCAGGATAGAGTGAGATCTTATATGATGAAGCACGGGTaGTTTCCACCCACCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSGIQGEFQASQDRVRSYMMKHG*FPPTQR Trigger: GCGCTGGGTGGGTGGAAAGCACCCGTGCTTCATCAT...ATAAGATCTCACTCTATCCTGGCTGGCCTGGAACTCACCCTGTATACCCGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | CACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGACATCTATGTCTCCTTaGTGGTTCTGGCCGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRVGRACLCPQGLRQSLMTSMSP*WFWPIS Trigger: GGAGATCGGCCAGAACCACCAAGGAGACATAGATGT...CATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CCA 90 bp | TTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCCTGGGATTTTCACTTTaGCTACCACAGACTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FPFSQLPLLGQLYRGLVCLGFSL*LPQTCR Trigger: TCGGCAAGTCTGTGGTAGCCAAAGTGAAAATCCCAG...GCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | CAGTCGGGTATACAGGGTGAGTTCCAGGCCAGCCAGGATAGAGTGAGATCTTATGGAACATTCAGTTCGTaGAGAAACTCAACTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: QSGIQGEFQASQDRVRSYGTFSS*RNSTAI Trigger: GATGGCAGTTGAGTTTCTGCACGAACTGAATGTTCC...ATAAGATCTCACTCTATCCTGGCTGGCCTGGAACTCACCCTGTATACCCGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR GCA 90 bp | TTCATGCCCTTAAACAAGTCAAACAATAGCACCTTTGTCTGGGTTTGTAATCTGGTGCAGAAACTCAACTaGCATCTCGTCCATGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FMPLNKSNNSTFVWVCNLVQKLN*HLVHAR Trigger: TCTGGCATGGACGAGATGGCAGTTGAGTTTCTGCAC...CAGATTACAAACCCAGACAAAGGTGCTATTGTTTGACTTGTTTAAGGGCATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | CTCCTTCCCAATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCCTGGAGAGCAGCAGCTGCTTGGTaGGGGAGCCCAGGGCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPNGLDTGGHCDRVAWRAAAAW*GSPGPA Trigger: AGCGGGCCCTGGGCTCCCCAACCAAGCAGCTGCTGC...TCTCCAGGCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATTGGGAAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 90 bp | GCCCCCAGAGCCACGGCGGCCACAGATATGGCGATGCCCGTCTCGTaGCCGGAATACCCGATGGGAATGTCGGGAAAGAGCTTCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: APRATAATDMAMPVS*PEYPMGMSGKSFWY Trigger: ATACCAGAAGCTCTTTCCCGACATTCCCATCGGGTATTCCGGGCACGAGACGGGCATCGCCATATCTGTGGCCGCCGTGGCTCTGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 90 bp | TCCCCTTCCAGGTCTTGTCCAACGTTATGTGACGTTCCAACACCTTaGCCCCCAGAGCCACGGCGGCCACAGATATGGCGATGCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSRSCPTLCDVPTP*PPEPRRPQIWRCPS Trigger: AGACGGGCATCGCCATATCTGTGGCCGCCGTGGCTCTGGGGGCCAAGGTGTTGGAACGTCACATAACGTTGGACAAGACCTGGAAGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | CCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCACGAGATGACGCGCAGGTaGGCATCCTCGGGCTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLLTAASAWPTVPWVSVHEMTRR*ASSGCS Trigger: ACTACAGCCCGAGGATGCCAACCTGCGCGTCATCTC...GTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 90 bp | GTGCGGATCATGCGCTTGGCCACATCTATGTCTCCTTGGTGGTTCTaGCCGATCTCCGCGATGATGAAGCACGGGTGCTTTCCACCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VRIMRLATSMSPWWF*PISAMMKHGCFPPT Trigger: GGTGGGTGGAAAGCACCCGTGCTTCATCATCGCGGAGATCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
||
| CDS-3UTR CAA 90 bp | AATGGGCTAGACACAGGTGGCCACTGCGACAGGGTGGCCTGGAGACTGACATTCGTACGCGCTGGTGCATaGGAGGAAGCAGAAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NGLDTGGHCDRVAWRLTFVRAGA*EEAEVG Trigger: CCCAACTTCTGCTTCCTCCAATGCACCAGCGCGTAC...GAATGTCAGTCTCCAGGCCACCCTGTCGCAGTGGCCACCTGTGTCTAGCCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCTGCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACTTGCCGAGCTTCTCATaGCAGGCCATCTCACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPCFPFPFSQLPLLGQLYLPSFS*QAISQG Trigger: GCCCTGTGAGATGGCCTGCAATGAGAAGCTCGGCAA...GTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGCAGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 90 bp | CGATCTCCTGCGCATAGCTCTGCAGCTCCTTGTACTGGTCGTGGCTaGATTCCAGATGCCGCTTGTGCTCCCCATACGTCTTCCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RSPAHSSAAPCTGRG*IPDAACAPHTSSPM Trigger: CATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGAATTCAGCCACGACCAGTACAAGGAGCTGCAGAGCTATGCGCAGGAGATCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 90 bp | AATACCCGATGGGAATGTCGGGAAAGAGCTTCTGGTATTCCGAGATaGCGCGCAGGTTGGCATCCTCGGGCTGTAGTGGGTACGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NTRWECRERASGIPR*RAGWHPRAVVGTRW Trigger: CCAGCGCGTACCCACTACAGCCCGAGGATGCCAACCTGCGCGTCATCTCGGAATACCAGAAGCTCTTTCCCGACATTCCCATCGGGTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 90 bp | GTCTCGTGCCCGGAATACCCGATGGGAATGTCGGGAAAGAGCTTCTaGTATTCCGAGATGACGCGCAGGTTGGCATCCTCGGGCTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: VSCPEYPMGMSGKSF*YSEMTRRLASSGCS Trigger: ACTACAGCCCGAGGATGCCAACCTGCGCGTCATCTCGGAATACCAGAAGCTCTTTCCCGACATTCCCATCGGGTATTCCGGGCACGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCTGCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACGTGCGGATCATGCGCTaGGCCACATCTATGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPCFPFPFSQLPLLGQLYVRIMR*ATSMSP Trigger: AGGAGACATAGATGTGGCCAAGCGCATGATCCGCAC...GTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGCAGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | CCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCACGCTTCATGGTGTCCATaGACTGCATCCCGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLLTAASAWPTVPWVSVHASWCP*TASRWR Trigger: TCTCCAGCGGGATGCAGTCAATGGACACCATGAAGC...GTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | CCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTAGTGTGCACTGGAGGAAGCAGAAGTaGGGATTCAGCGGCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: PLLTAASAWPTVPWVSVHWRKQK*GFSGFT Trigger: CGTGAAGCCGCTGAATCCCAACTTCTGCTTCCTCCA...GTGCACACTAACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 90 bp | CTCTCCAGGGCCTTCCGGTTAAACTTGAACTCCAACTCGCTCTTCTaGAACTTAGCGCAGTCGGCCCCACACTCCTTGGCAGTGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LSRAFRLNLNSNSLF*NLAQSAPHSLAVRI Trigger: GATCCGCACTGCCAAGGAGTGTGGGGCCGACTGCGCTAAGTTTCAGAAGAGCGAGTTGGAGTTCAAGTTTAACCGGAAGGCCCTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 90 bp | TTGGCAGTGCGGATCATGCGCTTGGCCACATCTATGTCTCCTTGGTaGTTCTGGCCGATCTCCGCGATGATGAAGCACGGGTGCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LAVRIMRLATSMSPW*FWPISAMMKHGCFP Trigger: TGGAAAGCACCCGTGCTTCATCATCGCGGAGATCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCACTGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 90 bp | TCCTTGGCAGTGCGGATCATGCGCTTGGCCACATCTATGTCTCCTTaGTGGTTCTGGCCGATCTCCGCGATGATGAAGCACGGGTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLAVRIMRLATSMSP*WFWPISAMMKHGCF Trigger: AAAGCACCCGTGCTTCATCATCGCGGAGATCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCACTGCCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | CCTCCCTGCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCACATCTATGTCTCCTaGGTGGTTCTGGCCGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPCFPFPFSQLPLLGQLYHIYVS*VVLADL Trigger: GAGATCGGCCAGAACCACCAAGGAGACATAGATGTG...GTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGCAGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | CACAGAGTTGGGAGAGCTTGTCTCTGCCCACAGGGGCTCAGGCAGAGTCTAATGTTGGCTACCACAGACTaGCCGAGCTTCTCATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRVGRACLCPQGLRQSLMLATTD*PSFSLQ Trigger: CTGCAATGAGAAGCTCGGCAAGTCTGTGGTAGCCAA...CATTAGACTCTGCCTGAGCCCCTGTGGGCAGAGACAAGCTCTCCCAACTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 90 bp | GTTCGTGCAGAAACTCAACTGCCATCTCGTCCATGCCAGAGGCAGTaGAGAAGATGCCGATCTCCTGCGCATAGCTCTGCAGCTCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VRAETQLPSRPCQRQ*RRCRSPAHSSAAPC Trigger: ACAAGGAGCTGCAGAGCTATGCGCAGGAGATCGGCATCTTCTTCACTGCCTCTGGCATGGACGAGATGGCAGTTGAGTTTCTGCACGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 90 bp | CGGGCTGTAGTGGGTACGCGCTGGTGCATTGGAGGAAGCAGAAGTTaGGATTCAGCGGCTTCACGATCTGATAGACTTGCTTCATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RAVVGTRWCIGGSRS*DSAASRSDRLASWC Trigger: ACACCATGAAGCAAGTCTATCAGATCGTGAAGCCGCTGAATCCCAACTTCTGCTTCCTCCAATGCACCAGCGCGTACCCACTACAGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 90 bp | GCTGAATTCCAGATGCCGCTTGTGCTCCCCATACGTCTTCCCCCATaGATGCTTCGAAGTATATGGTCTCTCCAGGGCCTTCCGGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AEFQMPLVLPIRLPP*MLRSIWSLQGLPVK Trigger: TTTAACCGGAAGGCCCTGGAGAGACCATATACTTCGAAGCATTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGAATTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 90 bp | TGCAGCTCCTTGTACTGGTCGTGGCTGAATTCCAGATGCCGCTTGTaGTCCCCATACGTCTTCCCCCATGAATGCTTCGAAGTATATGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSSLYWSWLNSRCRL*SPYVFPHECFEVYG Trigger: ACCATATACTTCGAAGCATTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGAATTCAGCCACGACCAGTACAAGGAGCTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS-3UTR CAA 90 bp | GCTTCCCATTCCCCTTCTCACAGCTGCCTCTGCTTGGCCAACTGTACCGTGGGTTCCCCAGATCCAACTTaGAAAAAGGGAACATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASHSPSHSCLCLANCTVGSPDPT*KKGTFS Trigger: ACTGAATGTTCCCTTTTTCAAAGTTGGATCTGGGGA...ACCCACGGTACAGTTGGCCAAGCAGAGGCAGCTGTGAGAAGGGGAATGGGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 90 bp | ATTCAGCGGCTTCACGATCTGATAGACTTGCTTCATGGTGTCCATTaGCTGCATCCCGCTGGAGATCACCATAGGACGACCTTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQRLHDLIDLLHGVH*LHPAGDHHRTTFLG Trigger: GCCAAGAAAGGTCGTCCTATGGTGATCTCCAGCGGGATGCAGTCAATGGACACCATGAAGCAAGTCTATCAGATCGTGAAGCCGCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 90 bp | AATTCCAGATGCCGCTTGTGCTCCCCATACGTCTTCCCCCATGAATaGTTCGAAGTATATGGTCTCTCCAGGGCCTTCCGGTTAAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSRCRLCSPYVFPHE*FEVYGLSRAFRLNL Trigger: CAAGTTTAACCGGAAGGCCCTGGAGAGACCATATACTTCGAAGCATTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | ACACCTTGGCCCCCAGAGCCACGGCGGCCACAGATATaGCGATGCCCGTCTCGTGCCCGGAATACCCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: TPWPPEPRRPQI*RCPSRARNTRW Trigger: CCATCGGGTATTCCGGGCACGAGACGGGCATCGCCATATCTGTGGCCGCCGTGGCTCTGGGGGCCAAGGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
||
| CDS GCA 72 bp | TGGTTCTGGCCGATCTCCGCGATGATGAAGCACGGGTaGTTTCCACCCACCCAGCGCCCGGGACACAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WFWPISAMMKHG*FPPTQRPGHSS Trigger: GGAGCTGTGTCCCGGGCGCTGGGTGGGTGGAAAGCACCCGTGCTTCATCATCGCGGAGATCGGCCAGAACCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 72 bp | TGGCCCCCAGAGCCACGGCGGCCACAGATATGGCGATaGCCGTCTCGTGCCCGGAATACCCGATGGGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: WPPEPRRPQIWR*PSRARNTRWEC Trigger: ACATTCCCATCGGGTATTCCGGGCACGAGACGGGCATCGCCATATCTGTGGCCGCCGTGGCTCTGGGGGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 72 bp | AGCTTCTCATTGCAGGCCATCTCACAGGGCAGCAGCTaGTTGGTTGGGGAGCCCAGGGCCCGCTCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SFSLQAISQGSS*LVGEPRARSTR Trigger: CCTGGTGGAGCGGGCCCTGGGCTCCCCAACCAAGCAGCTGCTGCCCTGTGAGATGGCCTGCAATGAGAAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
||
| CDS GCA 72 bp | GCCACGGCGGCCACAGATATGGCGATGCCCGTCTCGTaGCCGGAATACCCGATGGGAATGTCGGGAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATAATDMAMPVS*PEYPMGMSGKS Trigger: GCTCTTTCCCGACATTCCCATCGGGTATTCCGGGCACGAGACGGGCATCGCCATATCTGTGGCCGCCGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CAA 90 bp | TTAGCGCAGTCGGCCCCACACTCCTTGGCAGTGCGGATCATGCGCTaGGCCACATCTATGTCTCCTTGGTGGTTCTGGCCGATCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: LAQSAPHSLAVRIMR*ATSMSPWWFWPISA Trigger: CGCGGAGATCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCACTGCCAAGGAGTGTGGGGCCGACTGCGCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | CGGCCCCACACTCCTTGGCAGTGCGGATCATGCGCTTaGCCACATCTATGTCTCCTTGGTGGTTCTGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: RPHTPWQCGSCA*PHLCLLGGSGR Trigger: TCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCACTGCCAAGGAGTGTGGGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CAA 72 bp | TCGGCCCCACACTCCTTGGCAGTGCGGATCATGCGCTaGGCCACATCTATGTCTCCTTGGTGGTTCTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SAPHSLAVRIMR*ATSMSPWWFWP Trigger: CGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCACTGCCAAGGAGTGTGGGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 72 bp | GGTTGGCATCCTCGGGCTGTAGTGGGTACGCGCTGGTaGATTGGAGGAAGCAGAAGTTGGGATTCAGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: GWHPRAVVGTRW*IGGSRSWDSAA Trigger: AGCCGCTGAATCCCAACTTCTGCTTCCTCCAATGCACCAGCGCGTACCCACTACAGCCCGAGGATGCCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | GCAGGTTGGCATCCTCGGGCTGTAGTGGGTACGCGCTaGTGCATTGGAGGAAGCAGAAGTTGGGATTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: AGWHPRAVVGTR*CIGGSRSWDSA Trigger: CGCTGAATCCCAACTTCTGCTTCCTCCAATGCACCAGCGCGTACCCACTACAGCCCGAGGATGCCAACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CAA 72 bp | GGAAAGAGCTTCTGGTATTCCGAGATGACGCGCAGGTaGGCATCCTCGGGCTGTAGTGGGTACGCGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GKSFWYSEMTRR*ASSGCSGYALV Trigger: CACCAGCGCGTACCCACTACAGCCCGAGGATGCCAACCTGCGCGTCATCTCGGAATACCAGAAGCTCTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CAA 90 bp | CTCCTTGGCAGTGCGGATCATGCGCTTGGCCACATCTATGTCTCCTaGGTGGTTCTGGCCGATCTCCGCGATGATGAAGCACGGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLGSADHALGHIYVS*VVLADLRDDEARVL Trigger: AAGCACCCGTGCTTCATCATCGCGGAGATCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCACTGCCAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | CGGATCATGCGCTTGGCCACATCTATGTCTCCTTGGTaGTTCTGGCCGATCTCCGCGATGATGAAGCACGGG | + |
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Preference number: 6 (lower is better) Translates to: RIMRLATSMSPW*FWPISAMMKHG Trigger: CCCGTGCTTCATCATCGCGGAGATCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | AGGTCTTGTCCAACGTTATGTGACGTTCCAACACCTTaGCCCCCAGAGCCACGGCGGCCACAGATATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RSCPTLCDVPTP*PPEPRRPQIWR Trigger: TCGCCATATCTGTGGCCGCCGTGGCTCTGGGGGCCAAGGTGTTGGAACGTCACATAACGTTGGACAAGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 72 bp | GCGCATAGCTCTGCAGCTCCTTGTACTGGTCGTGGCTaGATTCCAGATGCCGCTTGTGCTCCCCATACGTCT | + |
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Preference number: 6 (lower is better) Translates to: AHSSAAPCTGRG*IPDAACAPHTS Trigger: AGACGTATGGGGAGCACAAGCGGCATCTGGAATTCAGCCACGACCAGTACAAGGAGCTGCAGAGCTATGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 72 bp | TGGGAATGTCGGGAAAGAGCTTCTGGTATTCCGAGATaGCGCGCAGGTTGGCATCCTCGGGCTGTAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: WECRERASGIPR*RAGWHPRAVVG Trigger: ACCCACTACAGCCCGAGGATGCCAACCTGCGCGTCATCTCGGAATACCAGAAGCTCTTTCCCGACATTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 72 bp | TGCCGCTTGTGCTCCCCATACGTCTTCCCCCATGAATaGTTCGAAGTATATGGTCTCTCCAGGGCCTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: CRLCSPYVFPHE*FEVYGLSRAFR Trigger: CCGGAAGGCCCTGGAGAGACCATATACTTCGAAGCATTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | GTGCGGATCATGCGCTTGGCCACATCTATGTCTCCTTaGTGGTTCTGGCCGATCTCCGCGATGATGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VRIMRLATSMSP*WFWPISAMMKH Trigger: GTGCTTCATCATCGCGGAGATCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | CCGGAATACCCGATGGGAATGTCGGGAAAGAGCTTCTaGTATTCCGAGATGACGCGCAGGTTGGCATCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PEYPMGMSGKSF*YSEMTRRLASS Trigger: CGAGGATGCCAACCTGCGCGTCATCTCGGAATACCAGAAGCTCTTTCCCGACATTCCCATCGGGTATTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 72 bp | TGCAGCTCCTTGTACTGGTCGTGGCTGAATTCCAGATaGCGCTTGTGCTCCCCATACGTCTTCCCCCATGAA | + |
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Preference number: 6 (lower is better) Translates to: CSSLYWSWLNSR*RLCSPYVFPHE Trigger: TTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGAATTCAGCCACGACCAGTACAAGGAGCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CAA 72 bp | AGTGCGGATCATGCGCTTGGCCACATCTATGTCTCCTaGGTGGTTCTGGCCGATCTCCGCGATGATGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SADHALGHIYVS*VVLADLRDDEA Trigger: TGCTTCATCATCGCGGAGATCGGCCAGAACCACCAAGGAGACATAGATGTGGCCAAGCGCATGATCCGCACT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 72 bp | GCCTTCCGGTTAAACTTGAACTCCAACTCGCTCTTCTaGAACTTAGCGCAGTCGGCCCCACACTCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: AFRLNLNSNSLF*NLAQSAPHSLA Trigger: TGCCAAGGAGTGTGGGGCCGACTGCGCTAAGTTTCAGAAGAGCGAGTTGGAGTTCAAGTTTAACCGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 72 bp | CAGATGCCGCTTGTGCTCCCCATACGTCTTCCCCCATaGATGCTTCGAAGTATATGGTCTCTCCAGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: QMPLVLPIRLPP*MLRSIWSLQGL Trigger: AAGGCCCTGGAGAGACCATATACTTCGAAGCATTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 72 bp | GAAACTCAACTGCCATCTCGTCCATGCCAGAGGCAGTaGAGAAGATGCCGATCTCCTGCGCATAGCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ETQLPSRPCQRQ*RRCRSPAHSSA Trigger: TGCAGAGCTATGCGCAGGAGATCGGCATCTTCTTCACTGCCTCTGGCATGGACGAGATGGCAGTTGAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | GTGGGTACGCGCTGGTGCATTGGAGGAAGCAGAAGTTaGGATTCAGCGGCTTCACGATCTGATAGACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: VGTRWCIGGSRS*DSAASRSDRLA Trigger: AGCAAGTCTATCAGATCGTGAAGCCGCTGAATCCCAACTTCTGCTTCCTCCAATGCACCAGCGCGTACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CAA 72 bp | TCCTTGTACTGGTCGTGGCTGAATTCCAGATGCCGCTaGTGCTCCCCATACGTCTTCCCCCATGAATGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLYWSWLNSRCR*CSPYVFPHECF Trigger: GAAGCATTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGAATTCAGCCACGACCAGTACAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 72 bp | TTGTACTGGTCGTGGCTGAATTCCAGATGCCGCTTGTaGTCCCCATACGTCTTCCCCCATGAATGCTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: LYWSWLNSRCRL*SPYVFPHECFE Trigger: TTCGAAGCATTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGAATTCAGCCACGACCAGTACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CAA 90 bp | CTCTGCAGCTCCTTGTACTGGTCGTGGCTGAATTCCAGATGCCGCTaGTGCTCCCCATACGTCTTCCCCCATGAATGCTTCGAAGTATAT | + |
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Preference number: 6 (lower is better) Translates to: LCSSLYWSWLNSRCR*CSPYVFPHECFEVY Trigger: ATATACTTCGAAGCATTCATGGGGGAAGACGTATGGGGAGCACAAGCGGCATCTGGAATTCAGCCACGACCAGTACAAGGAGCTGCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS TCA 72 bp | CTTCACGATCTGATAGACTTGCTTCATGGTGTCCATTaGCTGCATCCCGCTGGAGATCACCATAGGACGACC | + |
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Preference number: 6 (lower is better) Translates to: LHDLIDLLHGVH*LHPAGDHHRTT Trigger: GGTCGTCCTATGGTGATCTCCAGCGGGATGCAGTCAATGGACACCATGAAGCAAGTCTATCAGATCGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS CCA 72 bp | GATTCAGCGGCTTCACGATCTGATAGACTTGCTTCATaGTGTCCATTGACTGCATCCCGCTGGAGATCACCA | + |
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Preference number: 6 (lower is better) Translates to: DSAASRSDRLAS*CPLTASRWRSP Trigger: TGGTGATCTCCAGCGGGATGCAGTCAATGGACACCATGAAGCAAGTCTATCAGATCGTGAAGCCGCTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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| CDS GCA 72 bp | CCAGATCCAACTTTGAAAAAGGGAACATTCAGTTCGTaGAGAAACTCAACTGCCATCTCGTCCATGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PDPTLKKGTFSS*RNSTAISSMPE Trigger: CTCTGGCATGGACGAGATGGCAGTTGAGTTTCTGCACGAACTGAATGTTCCCTTTTTCAAAGTTGGATCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030018.5 |
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