Pregenerated sensors for NANOS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056155Ensembl transcript IDs: ENSMUST00000070102.6, ENSMUST00000210202.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATaGCTGTGTCCAGACCCTTGGCAACGATGCCACCATGGTCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: RLWPASVLSKVQSPA*LCPDPWQRCHHGPP Trigger: GGGAGGACCATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTGCAACGATGCCACCATaGTCCTCCCCACTCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: RLWPASVLSKVQSPACLCATMPP*SSPLQA Trigger: AGCTTGGAGTGGGGAGGACCATGGTGGCATCGTTGC...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| 3UTR CCA 72 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTaGCAACGATGCCACCATGGTCCTCCCCACTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: KVQSPACLCPDP*QRCHHGPPHSK Trigger: CTTGGAGTGGGGAGGACCATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR TCA 90 bp | GCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGACAGCAGGCCGAGGGTaGAGGTCCAGGGGGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ASVLSKVQSPACLCPDPWTAGRG*RSRGLP Trigger: AGGAAGCCCCCTGGACCTTCACCCTCGGCCTGCTGT...CCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCGGGCATGCTCCTGAGTaGCCCCACACTGGGGACACA | + |
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Preference number: 4 (lower is better) Translates to: ARSSLQHACVQTLGNDATGHAPE*PHTGDT Trigger: TGTGTCCCCAGTGTGGGGCCACTCAGGAGCATGCCC...GGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR TCA 90 bp | AGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGTGTGGGCATGCTCCTaGGTGGCCCCACACTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLSPKQGPVSSMPVSRPLVWACS*VAPHWG Trigger: TCCCCAGTGTGGGGCCACTCAGGAGCATGCCCACAC...CAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR TCA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATGTGTGGGCATGCTCCTaGGTGGCCCCACACTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KVQSPACLCPDPWQRCHHVWACS*VAPHWG Trigger: TCCCCAGTGTGGGGCCACTCAGGAGCATGCCCACAC...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR TCA 90 bp | AGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGACAGCAGGCCGAGGGTaGAGGTCCAGGGGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSPKQGPVSSMPVSRPLTAGRG*RSRGLP Trigger: AGGAAGCCCCCTGGACCTTCACCCTCGGCCTGCTGT...CAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATGGGCATGCTCCTGAGTaGCCCCACACTGGGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: KVQSPACLCPDPWQRCHHGHAPE*PHTGDT Trigger: TGTGTCCCCAGTGTGGGGCCACTCAGGAGCATGCCC...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| 3UTR CAA 72 bp | CAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTaGGCAACGATGCCACCATGGTCCTCCCCACTCCAA | + |
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Preference number: 4 (lower is better) Translates to: QGPVSSMPVSRP*ATMPPWSSPLQ Trigger: TTGGAGTGGGGAGGACCATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR TCA 90 bp | GCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGGGCTTGCTGGCTTTCTaGACTTGGCTTGGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASVLSKVQSPACLCPDPWGLLAF*TWLGLW Trigger: CCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCC...CCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR TCA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTTGTAGCCCTGGCTGGTaGGTGGGCAAAAGCGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: RLWPASVLSKVQSPACLCCSPGW*VGKSVE Trigger: CTCGACGCTTTTGCCCACTCACCAGCCAGGGCTACA...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | CTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCGCCCTGGCTGGTGAGTaGGCAAAAGCGTCGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LSKVQSPACLCPDPWQRCALAGE*AKASSV Trigger: CACACTCGACGCTTTTGCCCACTCACCAGCCAGGGC...GCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTGCCCTGGCTGGTGAGTaGGCAAAAGCGTCGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RLWPASVLSKVQSPACLCALAGE*AKASSV Trigger: CACACTCGACGCTTTTGCCCACTCACCAGCCAGGGC...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR TCA 90 bp | AGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGGCTTGCTGGCTTTCTaGACTTGGCTTGGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSPKQGPVSSMPVSRPLGLLAF*TWLGLW Trigger: CCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCC...CAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR GCA 90 bp | GCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCACTTTTGGAACCTGCTaGTGCTTCTCCTCCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: ARSSLQHACVQTLGNDATTFGTC*CFSSKA Trigger: CGCCTTGGAGGAGAAGCAGCAGCAGGTTCCAAAAGT...GGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | GCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCACTTGGCTTGGGCTCTaGTTTGGGATCCAGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARSSLQHACVQTLGNDATTWLGL*FGIQPY Trigger: GTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGT...GGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR GCA 90 bp | CTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAAGCATCCTGTGTCTTTaGCTTGTCAGGCCGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LSPKQGPVSSMPVSRPLASILCL*LVRPGQ Trigger: CTGACCCGGCCTGACAAGGCAAAGACACAGGATGCT...TGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR GCA 90 bp | AGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGTGCATAGACACCTGCTaGTGCTTCTCCTCCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: SLSPKQGPVSSMPVSRPLCIDTC*CFSSKA Trigger: CGCCTTGGAGGAGAAGCAGCAGCAGGTGTCTATGCA...CAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
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| CDS-3UTR GCA 90 bp | GCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGACCTGCATAGACACCTaGTGCTGCTTCTCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ASVLSKVQSPACLCPDPWTCIDT*CCFSSK Trigger: CTTGGAGGAGAAGCAGCAGCAGGTGTCTATGCAGGT...CCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
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| CDS-3UTR CCA 90 bp | GCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCTCCTTGCTGGCTTGCTaGCTTTCTGAACTTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ARSSLQHACVQTLGNDATSLLAC*LSELGL Trigger: CAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGA...GGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATCATAATCCCGCAAAATaGGACACAGCACCCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KVQSPACLCPDPWQRCHHHNPAK*DTAPAL Trigger: CAGGGCGGGTGCTGTGTCCCATTTTGCGGGATTATG...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | CTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCACATAATCCCGCAAAATaGGACACAGCACCCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSPKQGPVSSMPVSRPLAHNPAK*DTAPAL Trigger: CAGGGCGGGTGCTGTGTCCCATTTTGCGGGATTATG...TGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR GCA 90 bp | GCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGAGCTCCTCTTCCTTATaGAGAGCCCCAACCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ASVLSKVQSPACLCPDPWSSSSL*RAPTSL Trigger: AAGACTGGTTGGGGCTCTGCATAAGGAAGAGGAGCT...CCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR GCA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCTGCAGAGGATTCCTTaGTGGCTTGCTGGCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RLWPASVLSKVQSPACLCLQRIP*WLAGFL Trigger: CAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAG...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR GCA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATCTGCAGAGGATTCCTTaGTGGCTTGCTGGCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KVQSPACLCPDPWQRCHHLQRIP*WLAGFL Trigger: CAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAG...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | CTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACTTGGCTTGGGCTCTaGTTTGGGATCCAGCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LSPKQGPVSSMPVSRPLATWLGL*FGIQPY Trigger: GTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGT...TGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCATGGGACTGATAGATaGCACGGGACTCGCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: RLWPASVLSKVQSPACLCHGTDR*HGTRHC Trigger: ACAATGGCGAGTCCCGTGCCATCTATCAGTCCCATG...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | GCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGGCTTCCTGCCACTTTTaGAACCTGCATAGACACCTG | + |
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Preference number: 4 (lower is better) Translates to: ASVLSKVQSPACLCPDPWASCHF*NLHRHL Trigger: CAGGTGTCTATGCAGGTTCCAAAAGTGGCAGGAAGC...CCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
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| CDS-3UTR GCA 90 bp | CTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCGATTCCTTGCTGGCTTaGTGGCTTTCTGAACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSKVQSPACLCPDPWQRCDSLLA*WLSELG Trigger: GCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATC...GCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | CTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCATCCTTGCTGGCTTGCTaGCTTTCTGAACTTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSPKQGPVSSMPVSRPLASLLAC*LSELGL Trigger: CAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGA...TGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CCA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATCTGCAGAATTCCGGGTaGTGTAGCAGTAGACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KVQSPACLCPDPWQRCHHLQNSG*CSSRQK Trigger: CTTCTGTCTACTGCTACACCACCCGGAATTCTGCAG...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS CCA 90 bp | CCGGGTGGTGTAGCAGTAGACAGAAGTGTAGCCCTGGCTGGTGAGTaGGCAAAAGCGTCGAGTGTGGGCATGCTCCTGAGTGGCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: PGGVAVDRSVALAGE*AKASSVGMLLSGPT Trigger: TGTGGGGCCACTCAGGAGCATGCCCACACTCGACGCTTTTGCCCACTCACCAGCCAGGGCTACACTTCTGTCTACTGCTACACCACCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CAA 90 bp | GCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCCAGCATCCTGTGTCTTaGCCTTGTCAGGCCGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: ARSSLQHACVQTLGNDATQHPVS*PCQAGS Trigger: TGACCCGGCCTGACAAGGCAAAGACACAGGATGCTG...GGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS TCA 90 bp | AATTCCGGGTGGTGTAGCAGTAGACAGAAGTGTAGCCCTGGCTGGTaGGTGGGCAAAAGCGTCGAGTGTGGGCATGCTCCTGAGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: NSGWCSSRQKCSPGW*VGKSVECGHAPEWP Trigger: GGGCCACTCAGGAGCATGCCCACACTCGACGCTTTTGCCCACTCACCAGCCAGGGCTACACTTCTGTCTACTGCTACACCACCCGGAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS GCA 90 bp | TCCAGGGGGCTTCCTGCCACTTTTGGAACCTGCATAGACACCTGCTaGTGCTTCTCCTCCAAGGCGGTGGCCAGCATCCTGTGTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SRGLPATFGTCIDTC*CFSSKAVASILCLC Trigger: GCAAAGACACAGGATGCTGGCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTGTCTATGCAGGTTCCAAAAGTGGCAGGAAGCCCCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
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| CDS GCA 90 bp | AGGTCCAGGGGGCTTCCTGCCACTTTTGGAACCTGCATAGACACCTaGTGCTGCTTCTCCTCCAAGGCGGTGGCCAGCATCCTGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: RSRGLPATFGTCIDT*CCFSSKAVASILCL Trigger: AAGACACAGGATGCTGGCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTGTCTATGCAGGTTCCAAAAGTGGCAGGAAGCCCCCTGGACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
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| CDS-3UTR CAA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTGGCCGGGTCAGCTTTTaGCCTGCAGAATTCCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: RLWPASVLSKVQSPACLCGRVSF*PAEFRV Trigger: CACCCGGAATTCTGCAGGCAAAAAGCTGACCCGGCC...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CAA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATGGCCGGGTCAGCTTTTaGCCTGCAGAATTCCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: KVQSPACLCPDPWQRCHHGRVSF*PAEFRV Trigger: CACCCGGAATTCTGCAGGCAAAAAGCTGACCCGGCC...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS GCA 90 bp | CTGGGGACACACATAATCCCGCAAAATGGGACACAGCACCCGCCCTaGCTCATCCTTCAGGACATGGGACTGATAGATGGCACGGGACTC | + |
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Preference number: 5 (lower is better) Translates to: LGTHIIPQNGTQHPP*LILQDMGLIDGTGL Trigger: GAGTCCCGTGCCATCTATCAGTCCCATGTCCTGAAGGATGAGGCAGGGCGGGTGCTGTGTCCCATTTTGCGGGATTATGTGTGTCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS GCA 90 bp | AGGGGGCTTCCTGCCACTTTTGGAACCTGCATAGACACCTGCTGCTaGTTCTCCTCCAAGGCGGTGGCCAGCATCCTGTGTCTTTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: RGLPATFGTCIDTCC*FSSKAVASILCLCL Trigger: AAGGCAAAGACACAGGATGCTGGCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTGTCTATGCAGGTTCCAAAAGTGGCAGGAAGCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
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| CDS CCA 90 bp | TTCCTGCCACTTTTGGAACCTGCTGCTGCTTCTCCTCCAAGGCGGTaGCCAGCATCCTGTGTCTTTGCCTTGTCAGGCCGGGTCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: FLPLLEPAAASPPRR*PASCVFALSGRVSF Trigger: AAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGATGCTGGCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTTCCAAAAGTGGCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210202.2 |
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| CDS-3UTR CAA 90 bp | GCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCCTTTCTGAACTTGGCTaGGGCTCTGGTTTGGGATCC | + |
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Preference number: 5 (lower is better) Translates to: ARSSLQHACVQTLGNDATLSELG*GSGLGS Trigger: GGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAG...GGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CAA 90 bp | GCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGTCCTGTGTCTTTGCCTaGTCAGGCCGGGTCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: ASVLSKVQSPACLCPDPWSCVFA*SGRVSF Trigger: AAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGA...CCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS-3UTR CAA 90 bp | CTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCACAGCATCCTGTGTCTTaGCCTTGTCAGGCCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPKQGPVSSMPVSRPLAQHPVS*PCQAGS Trigger: TGACCCGGCCTGACAAGGCAAAGACACAGGATGCTG...TGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCGAGCCCCAACCAGTCTaGCCAGACCTAGGTAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSKVQSPACLCPDPWQRCEPQPV*PDLGNL Trigger: CAGATTACCTAGGTCTGGCAAGACTGGTTGGGGCTC...GCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTGAGCCCCAACCAGTCTaGCCAGACCTAGGTAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLWPASVLSKVQSPACLCEPQPV*PDLGNL Trigger: CAGATTACCTAGGTCTGGCAAGACTGGTTGGGGCTC...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCTGGCTTTCTGAACTaGGCTTGGGCTCTGGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSPKQGPVSSMPVSRPLAGFLN*AWALVW Trigger: CCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGC...CAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATGCTGGCTTTCTGAACTaGGCTTGGGCTCTGGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVQSPACLCPDPWQRCHHAGFLN*AWALVW Trigger: CCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGC...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATGCTGCAGAGGATTCCTaGCTGGCTTGCTGGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KVQSPACLCPDPWQRCHHAAEDS*LACWLS Trigger: AGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGC...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTGCTGCAGAGGATTCCTaGCTGGCTTGCTGGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLWPASVLSKVQSPACLCAAEDS*LACWLS Trigger: AGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGC...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGTCCTGTGTCTTTGCCTaGTCAGGCCGGGTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLSPKQGPVSSMPVSRPLSCVFA*SGRVSF Trigger: AAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGA...CAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | AGACTGTGGCCAGCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTGGCTTCCTGCCACTTTaGGAACCTGCTGCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLWPASVLSKVQSPACLCGFLPL*EPAAAS Trigger: AGAAGCAGCAGCAGGTTCCAAAAGTGGCAGGAAGCC...ACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGCTGGCCACAGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210202.2 |
||
| CDS GCA 90 bp | GGCCAGCATCCTGTGTCTTTGCCTTGTCAGGCCGGGTCAGCTTTTTaGCTGCAGAATTCCGGGTGGTGTAGCAGTAGACAGAAGTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQHPVSLPCQAGSAF*LQNSGWCSSRQKCS Trigger: GCTACACTTCTGTCTACTGCTACACCACCCGGAATTCTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGATGCTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS TCA 90 bp | GCGTTCAGGAGCTGCAGAGGATTCCTTGCTGGCTTGCTGGCTTTCTaGACTTGGCTTGGGCTCTGGTTTGGGATCCAGCCTTACATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AFRSCRGFLAGLLAF*TWLGLWFGIQPYIK Trigger: CTTGATGTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 90 bp | AGCATCCTGTGTCTTTGCCTTGTCAGGCCGGGTCAGCTTTTTGCCTaGAGAATTCCGGGTGGTGTAGCAGTAGACAGAAGTGTAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SILCLCLVRPGQLFA*RIPGGVAVDRSVAL Trigger: CAGGGCTACACTTCTGTCTACTGCTACACCACCCGGAATTCTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CCA 90 bp | CCTTGCTGGCTTGCTGGCTTTCTGAACTTGGCTTGGGCTCTGGTTTaGGATCCAGCCTTACATCAAGCTCCTCTTCCTTATGCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PCWLAGFLNLAWALV*DPALHQAPLPYAEP Trigger: GGGCTCTGCATAAGGAAGAGGAGCTTGATGTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAACGATGCCACCATGCACGGGACTCGCCATaGTGTTTGCAGAATGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: KVQSPACLCPDPWQRCHHARDSP*CLQNEH Trigger: ATGTTCATTCTGCAAACACAATGGCGAGTCCCGTGC...ATGGTGGCATCGTTGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CCA 90 bp | GAACATAAGCGTTCAGGAGCTGCAGAGGATTCCTTGCTGGCTTGCTaGCTTTCTGAACTTGGCTTGGGCTCTGGTTTGGGATCCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EHKRSGAAEDSLLAC*LSELGLGSGLGSSL Trigger: AAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CCA 90 bp | ACAGCACCCGCCCTGCCTCATCCTTCAGGACATGGGACTGATAGATaGCACGGGACTCGCCATTGTGTTTGCAGAATGAACATAAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: TAPALPHPSGHGTDR*HGTRHCVCRMNISV Trigger: AACGCTTATGTTCATTCTGCAAACACAATGGCGAGTCCCGTGCCATCTATCAGTCCCATGTCCTGAAGGATGAGGCAGGGCGGGTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGGACTCGCCATTGTGTTaGCAGAATGAACATAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ASVLSKVQSPACLCPDPWDSPLC*QNEHKR Trigger: ACGCTTATGTTCATTCTGCAAACACAATGGCGAGTC...CCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 90 bp | AATGAACATAAGCGTTCAGGAGCTGCAGAGGATTCCTTGCTGGCTTaGTGGCTTTCTGAACTTGGCTTGGGCTCTGGTTTGGGATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NEHKRSGAAEDSLLA*WLSELGLGSGLGSS Trigger: GCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGTCCTAAGCAAGGTCCAGTCTCCAGCATGCCTGTGTCCAGACCCTTGGCAGACTCGCCATTGTGTTaGCAGAATGAACATAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSPKQGPVSSMPVSRPLADSPLC*QNEHKR Trigger: ACGCTTATGTTCATTCTGCAAACACAATGGCGAGTC...TGCCAAGGGTCTGGACACAGGCATGCTGGAGACTGGACCTTGCTTAGGACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 90 bp | GTTTGCAGAATGAACATAAGCGTTCAGGAGCTGCAGAGGATTCCTTaGTGGCTTGCTGGCTTTCTGAACTTGGCTTGGGCTCTGGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VCRMNISVQELQRIP*WLAGFLNLAWALVW Trigger: CCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTTCATTCTGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 90 bp | TCAGGACATGGGACTGATAGATGGCACGGGACTCGCCATTGTGTTTaGAGAATGAACATAAGCGTTCAGGAGCTGCAGAGGATTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGHGTDRWHGTRHCV*RMNISVQELQRIPC Trigger: GCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTTCATTCTGCAAACACAATGGCGAGTCCCGTGCCATCTATCAGTCCCATGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CCA 90 bp | TGCAGAATGAACATAAGCGTTCAGGAGCTGCAGAGGATTCCTTGCTaGCTTGCTGGCTTTCTGAACTTGGCTTGGGCTCTGGTTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CRMNISVQELQRIPC*LAGFLNLAWALVWD Trigger: ATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTTCATTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | AGGTCCAGGGGGCTTCCTGCCACTTTTGGAACCTGCTaGTGCTTCTCCTCCAAGGCGGTGGCCAGCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSRGLPATFGTC*CFSSKAVASIL Trigger: CAGGATGCTGGCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTTCCAAAAGTGGCAGGAAGCCCCCTGGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | TCCAGGGGGCTTCCTGCCACTTTTGGAACCTGCTGCTaGTTCTCCTCCAAGGCGGTGGCCAGCATCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRGLPATFGTCC*FSSKAVASILC Trigger: ACACAGGATGCTGGCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTTCCAAAAGTGGCAGGAAGCCCCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | GACAGCAGGCCGAGGGTGAAGGTCCAGGGGGCTTCCTaGCACTTTTGGAACCTGCTGCTGCTTCTCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: DSRPRVKVQGAS*HFWNLLLLLLQ Trigger: TTGGAGGAGAAGCAGCAGCAGGTTCCAAAAGTGGCAGGAAGCCCCCTGGACCTTCACCCTCGGCCTGCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | GGGCTTCCTGCCACTTTTGGAACCTGCATAGACACCTaGTGCTGCTTCTCCTCCAAGGCGGTGGCCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: GLPATFGTCIDT*CCFSSKAVASI Trigger: GATGCTGGCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTGTCTATGCAGGTTCCAAAAGTGGCAGGAAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
||
| CDS CCA 72 bp | CCGAGGGTGAAGGTCCAGGGGGCTTCCTGCCACTTTTaGAACCTGCATAGACACCTGCTGCTGCTTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PRVKVQGASCHF*NLHRHLLLLLL Trigger: GAGGAGAAGCAGCAGCAGGTGTCTATGCAGGTTCCAAAAGTGGCAGGAAGCCCCCTGGACCTTCACCCTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
||
| CDS CAA 72 bp | CTTCTCCTCCAAGGCGGTGGCCAGCATCCTGTGTCTTaGCCTTGTCAGGCCGGGTCAGCTTTTTGCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLLQGGGQHPVS*PCQAGSAFCLQ Trigger: CTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGATGCTGGCCACCGCCTTGGAGGAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | TTCTCCTCCAAGGCGGTGGCCAGCATCCTGTGTCTTTaGCTTGTCAGGCCGGGTCAGCTTTTTGCCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FSSKAVASILCL*LVRPGQLFACR Trigger: TCTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGATGCTGGCCACCGCCTTGGAGGAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | CTTCCTGCCACTTTTGGAACCTGCATAGACACCTGCTaGTGCTTCTCCTCCAAGGCGGTGGCCAGCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPATFGTCIDTC*CFSSKAVASIL Trigger: CAGGATGCTGGCCACCGCCTTGGAGGAGAAGCAGCAGCAGGTGTCTATGCAGGTTCCAAAAGTGGCAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070102.6 |
||
| CDS CAA 72 bp | CCTCCAAGGCGGTGGCCAGCATCCTGTGTCTTTGCCTaGTCAGGCCGGGTCAGCTTTTTGCCTGCAGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: PPRRWPASCVFA*SGRVSFLPAEF Trigger: GAATTCTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAAAGACACAGGATGCTGGCCACCGCCTTGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS TCA 72 bp | TGGTGTAGCAGTAGACAGAAGTGTAGCCCTGGCTGGTaGGTGGGCAAAAGCGTCGAGTGTGGGCATGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WCSSRQKCSPGW*VGKSVECGHAP Trigger: AGGAGCATGCCCACACTCGACGCTTTTGCCCACTCACCAGCCAGGGCTACACTTCTGTCTACTGCTACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS TCA 72 bp | AGCTGCAGAGGATTCCTTGCTGGCTTGCTGGCTTTCTaGACTTGGCTTGGGCTCTGGTTTGGGATCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SCRGFLAGLLAF*TWLGLWFGIQP Trigger: AGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | CACATAATCCCGCAAAATGGGACACAGCACCCGCCCTaGCTCATCCTTCAGGACATGGGACTGATAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HIIPQNGTQHPP*LILQDMGLIDG Trigger: GCCATCTATCAGTCCCATGTCCTGAAGGATGAGGCAGGGCGGGTGCTGTGTCCCATTTTGCGGGATTATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | CCTGTGTCTTTGCCTTGTCAGGCCGGGTCAGCTTTTTaGCTGCAGAATTCCGGGTGGTGTAGCAGTAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: PVSLPCQAGSAF*LQNSGWCSSRQ Trigger: CTGTCTACTGCTACACCACCCGGAATTCTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAAAGACACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CCA 72 bp | CGTTCAGGAGCTGCAGAGGATTCCTTGCTGGCTTGCTaGCTTTCTGAACTTGGCTTGGGCTCTGGTTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSGAAEDSLLAC*LSELGLGSGLG Trigger: TCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CCA 72 bp | GCCCTGCCTCATCCTTCAGGACATGGGACTGATAGATaGCACGGGACTCGCCATTGTGTTTGCAGAATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ALPHPSGHGTDR*HGTRHCVCRMN Trigger: GTTCATTCTGCAAACACAATGGCGAGTCCCGTGCCATCTATCAGTCCCATGTCCTGAAGGATGAGGCAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CAA 90 bp | TCCTTGCTGGCTTGCTGGCTTTCTGAACTTGGCTTGGGCTCTGGTTaGGGATCCAGCCTTACATCAAGCTCCTCTTCCTTATGCAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLACWLSELGLGSG*GSSLTSSSSSLCRA Trigger: GGCTCTGCATAAGGAAGAGGAGCTTGATGTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | GGGACTGATAGATGGCACGGGACTCGCCATTGTGTTTaGAGAATGAACATAAGCGTTCAGGAGCTGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTDRWHGTRHCV*RMNISVQELQR Trigger: CCTCTGCAGCTCCTGAACGCTTATGTTCATTCTGCAAACACAATGGCGAGTCCCGTGCCATCTATCAGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CCA 72 bp | AACATAAGCGTTCAGGAGCTGCAGAGGATTCCTTGCTaGCTTGCTGGCTTTCTGAACTTGGCTTGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NISVQELQRIPC*LAGFLNLAWAL Trigger: CAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CAA 72 bp | GATTCCTTGCTGGCTTGCTGGCTTTCTGAACTTGGCTaGGGCTCTGGTTTGGGATCCAGCCTTACATCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: DSLLACWLSELG*GSGLGSSLTSS Trigger: GCTTGATGTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS GCA 72 bp | ATGAACATAAGCGTTCAGGAGCTGCAGAGGATTCCTTaGTGGCTTGCTGGCTTTCTGAACTTGGCTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MNISVQELQRIP*WLAGFLNLAWA Trigger: AGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CCA 72 bp | ATTCCTTGCTGGCTTGCTGGCTTTCTGAACTTGGCTTaGGCTCTGGTTTGGGATCCAGCCTTACATCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: IPCWLAGFLNLA*ALVWDPALHQA Trigger: AGCTTGATGTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CAA 72 bp | GCTTGCTGGCTTTCTGAACTTGGCTTGGGCTCTGGTTaGGGATCCAGCCTTACATCAAGCTCCTCTTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: ACWLSELGLGSG*GSSLTSSSSSL Trigger: TAAGGAAGAGGAGCTTGATGTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CAA 72 bp | AATGAACATAAGCGTTCAGGAGCTGCAGAGGATTCCTaGCTGGCTTGCTGGCTTTCTGAACTTGGCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NEHKRSGAAEDS*LACWLSELGLG Trigger: GCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
||
| CDS CAA 90 bp | TGTTTGCAGAATGAACATAAGCGTTCAGGAGCTGCAGAGGATTCCTaGCTGGCTTGCTGGCTTTCTGAACTTGGCTTGGGCTCTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLQNEHKRSGAAEDS*LACWLSELGLGSGL Trigger: CAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAGCCAGCAAGGAATCCTCTGCAGCTCCTGAACGCTTATGTTCATTCTGCAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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| CDS CCA 72 bp | CTTGCTGGCTTTCTGAACTTGGCTTGGGCTCTGGTTTaGGATCCAGCCTTACATCAAGCTCCTCTTCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: LAGFLNLAWALV*DPALHQAPLPY Trigger: ATAAGGAAGAGGAGCTTGATGTAAGGCTGGATCCCAAACCAGAGCCCAAGCCAAGTTCAGAAAGCCAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070102.6 ENSMUST00000210202.2 |
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