Pregenerated sensors for NANOS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072437Ensembl transcript IDs: ENSMUST00000088237.6
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCAACGTCAGAGACCGACCACTCCACAAGAAAGTGCTGCGCTCCTaGGGCTTCCGTAAAATCAAGACGACTTCCCAAATTGAGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: FNVRDRPLHKKVLRS*GFRKIKTTSQIEAR Trigger: CCTTGCCTCAATTTGGGAAGTCGTCTTGATTTTACGGAAGCCGCAGGAGCGCAGCACTTTCTTGTGGAGTGGTCGGTCTCTGACGTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CCA 90 bp | CACCGCAACTCAACCGGTGGTACACCCGCTCAGCCCTCACCGTTCTaGATGCGCGTTTTAGAAACTAGGGACAAAATTCAAGATTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: HRNSTGGTPAQPSPF*MRVLETRDKIQDFN Trigger: GTTGAAATCTTGAATTTTGTCCCTAGTTTCTAAAACGCGCATCCAGAACGGTGAGGGCTGAGCGGGTGTACCACCGGTTGAGTTGCGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR GCA 90 bp | CACAGCACAACCTGTGCCTTTCTGCCCATGGTGAAGCTGTTACAATaGTGTCCCTTTTTGTGGTCTAGCCAGATCCACAGTGCTTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: HSTTCAFLPMVKLLQ*CPFLWSSQIHSAFL Trigger: TAAGAAAGCACTGTGGATCTGGCTAGACCACAAAAAGGGACAGCATTGTAACAGCTTCACCATGGGCAGAAAGGCACAGGTTGTGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CCA 90 bp | GCCTTTCTGCCCATGGTGAAGCTGTTACAATGCTGTCCCTTTTTGTaGTCTAGCCAGATCCACAGTGCTTTCTTAGGCAGAAGCCAACTT | + |
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Preference number: 1 (lower is better) Translates to: AFLPMVKLLQCCPFL*SSQIHSAFLGRSQL Trigger: AAGTTGGCTTCTGCCTAAGAAAGCACTGTGGATCTGGCTAGACCACAAAAAGGGACAGCATTGTAACAGCTTCACCATGGGCAGAAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CCA 90 bp | GGAGTACTGGAAAGAGGAACTTTGCATGAAGATCTTTTGGGGTTCTaGAAGCAGACAAGGGTCTCAGTAATAGTGGAACCACCAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GVLERGTLHEDLLGF*KQTRVSVIVEPPRG Trigger: CCCTCTTGGTGGTTCCACTATTACTGAGACCCTTGTCTGCTTCCAGAACCCCAAAAGATCTTCATGCAAAGTTCCTCTTTCCAGTACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR GCA 90 bp | GCACTCACTATGATAGATTTACAGGAGTACTGGAAAGAGGAACTTTaGATGAAGATCTTTTGGGGTTCTGGAAGCAGACAAGGGTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: ALTMIDLQEYWKEEL*MKIFWGSGSRQGSQ Trigger: CTGAGACCCTTGTCTGCTTCCAGAACCCCAAAAGATCTTCATGCAAAGTTCCTCTTTCCAGTACTCCTGTAAATCTATCATAGTGAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR TCA 90 bp | CAATCAAGGTGGGTTAACACTGCTCTAAATAGGTTTCCTCCTTTCTaGGGAGGAAATGTCTTAGCATCAGACACAAAGAATTGGACCATC | + |
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Preference number: 1 (lower is better) Translates to: QSRWVNTALNRFPPF*GGNVLASDTKNWTI Trigger: GATGGTCCAATTCTTTGTGTCTGATGCTAAGACATTTCCTCCTCAGAAAGGAGGAAACCTATTTAGAGCAGTGTTAACCCACCTTGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR TCA 90 bp | CTCAGTAATAGTGGAACCACCAAGAGGGAGTTAATGAGACAGACTTaGAGTGGTTTATTCTGGCACACCCTCTGTAAATTGAAAGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: LSNSGTTKRELMRQT*SGLFWHTLCKLKGK Trigger: TTTGCCTTTCAATTTACAGAGGGTGTGCCAGAATAAACCACTTCAAGTCTGTCTCATTAACTCCCTCTTGGTGGTTCCACTATTACTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CCA 90 bp | TTGTGCCATATTCCAGCACTCACTATGATAGATTTACAGGAGTACTaGAAAGAGGAACTTTGCATGAAGATCTTTTGGGGTTCTGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LCHIPALTMIDLQEY*KEELCMKIFWGSGS Trigger: GCTTCCAGAACCCCAAAAGATCTTCATGCAAAGTTCCTCTTTCCAGTACTCCTGTAAATCTATCATAGTGAGTGCTGGAATATGGCACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR TCA 90 bp | ATACACGTCTCTCAAACAGCACCGTTTCCAAATATGTACACGATATaGTTAAGCCTTGGCACAGTTAATTTTAAGGATTGGAAAGACTAC | + |
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Preference number: 1 (lower is better) Translates to: IHVSQTAPFPNMYTI*LSLGTVNFKDWKDY Trigger: GTAGTCTTTCCAATCCTTAAAATTAACTGTGCCAAGGCTTAATCATATCGTGTACATATTTGGAAACGGTGCTGTTTGAGAGACGTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR TCA 90 bp | TGCAAAACCTTTATAACATTGCATTCCAAGCCTTCCTCTACTTCCTaGGTGTCAGGATTAAAGGATTGGTTATTTTTAGGGCTAAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: CKTFITLHSKPSSTS*VSGLKDWLFLGLSL Trigger: TAAACTTAGCCCTAAAAATAACCAATCCTTTAATCCTGACACTCAGGAAGTAGAGGAAGGCTTGGAATGCAATGTTATAAAGGTTTTGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGCCCATCCATGTAGCGTGGCTGGCCTCTGCCTCGTGAGCACTGGGGTTGATCTTTTGGGGTTCTaGAAGCAGACAAGGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PGAHPCSVAGLCLVSTGVDLLGF*KQTRVS Trigger: TGAGACCCTTGTCTGCTTCCAGAACCCCAAAAGATC...AACCCCAGTGCTCACGAGGCAGAGGCCAGCCACGCTACATGGATGGGCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAGCCCATCCATGTAGCGTGGCTGGCCTCTGCCTCGTGAGCACTGGGGTTATTCACCTTTACCTTTaGCTCTTCTGTCTAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: PGAHPCSVAGLCLVSTGVIHLYL*LFCLDG Trigger: ACCATCTAGACAGAAGAGGCAAAGGTAAAGGTGAAT...AACCCCAGTGCTCACGAGGCAGAGGCCAGCCACGCTACATGGATGGGCTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGCCCATCCATGTAGCGTGGCTGGCCTCTGCCTCGTGAGCACTGGGGTTCATACATACGTGCCTTaGGAAATATCTGATGGGATT | + |
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Preference number: 2 (lower is better) Translates to: PGAHPCSVAGLCLVSTGVHTYVP*EISDGI Trigger: AATCCCATCAGATATTTCCCAAGGCACGTATGTATG...AACCCCAGTGCTCACGAGGCAGAGGCCAGCCACGCTACATGGATGGGCTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR TCA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTGACGACTTCCCAAATTaGGGCAAGGGAGAGGAGCGC | + |
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Preference number: 2 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSDDFPN*GKGEER Trigger: GCGCTCCTCTCCCTTGCCTCAATTTGGGAAGTCGTC...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CAA 90 bp | ACACAGACTTGGCATGGGTTGGAGAACACCATGTGGGATACAGTTTaGTGTGGTCACTACTGTGTGCAAGCACATGGAGGTCAGAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TQTWHGLENTMWDTV*CGHYCVQAHGGQRS Trigger: TGACCTCTGACCTCCATGTGCTTGCACACAGTAGTGACCACACAAAACTGTATCCCACATGGTGTTCTCCAACCCATGCCAAGTCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CAA 90 bp | TGTGCCTTTCTGCCCATGGTGAAGCTGTTACAATGCTGTCCCTTTTaGTGGTCTAGCCAGATCCACAGTGCTTTCTTAGGCAGAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: CAFLPMVKLLQCCPF*WSSQIHSAFLGRSQ Trigger: TTGGCTTCTGCCTAAGAAAGCACTGTGGATCTGGCTAGACCACAAAAAGGGACAGCATTGTAACAGCTTCACCATGGGCAGAAAGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGCTAGACTGCCTTGCTAGTGTCCCCAGTGATGCAATCATAGCTACCTTTACACCCTCTGTAAATTaGAAGGCAAACAGCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LELDCLASVPSDAIIATFTPSVN*KANSPE Trigger: CTCTGGGCTGTTTGCCTTTCAATTTACAGAGGGTGT...AAAGGTAGCTATGATTGCATCACTGGGGACACTAGCAAGGCAGTCTAGCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR TCA 90 bp | CCATACCTGGAGCTAGACTGCCTTGCTAGTGTCCCCAGTGATGCAATCATAGCTGCCTTGGGAAATATCTaGTGGGATTACAGCAATCTG | + |
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Preference number: 2 (lower is better) Translates to: PYLELDCLASVPSDAIIAALGNI*WDYSNL Trigger: CAGATTGCTGTAATCCCATCAGATATTTCCCAAGGC...AGCTATGATTGCATCACTGGGGACACTAGCAAGGCAGTCTAGCTCCAGGTATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR GCA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTAAAGTGCTGCGCTCCTaGGGCTTCCGTAAAATCAAG | + |
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Preference number: 2 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSKVLRS*GFRKIK Trigger: CTTGATTTTACGGAAGCCGCAGGAGCGCAGCACTTT...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CCA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTCAGCCCTCACCGTTCTaGATGCGCGTTTTAGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSQPSPF*MRVLET Trigger: AGTTTCTAAAACGCGCATCCAGAACGGTGAGGGCTG...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR TCA 90 bp | CCATACCTGGAGCTAGACTGCCTTGCTAGTGTCCCCAGTGATGCAATCATAGCTAACAGCTACTTAGTTTaGTATTTTCCAAGAGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: PYLELDCLASVPSDAIIANSYLV*YFPRAL Trigger: GAGGGCTCTTGGAAAATATCAAACTAAGTAGCTGTT...AGCTATGATTGCATCACTGGGGACACTAGCAAGGCAGTCTAGCTCCAGGTATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CCA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTGGCATTAGGTACATGTaGTCATGGTTCAGCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSGIRYM*SWFSSC Trigger: ACATGAGCTGAACCATGACCACATGTACCTAATGCC...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGCACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTACGAAACATCCAAGATaGGAGACAATTTCATACGGT | + |
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Preference number: 2 (lower is better) Translates to: QAHGGQRSRVALLNHILLTKHPR*ETISYG Trigger: ACCGTATGAAATTGTCTCTCATCTTGGATGTTTCGT...AAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGCACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTGATTTACAGGAGTACTaGAAAGAGGAACTTTGCATG | + |
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Preference number: 2 (lower is better) Translates to: QAHGGQRSRVALLNHILLDLQEY*KEELCM Trigger: CATGCAAAGTTCCTCTTTCCAGTACTCCTGTAAATC...AAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CAA 90 bp | AGATTTACAGGAGTACTGGAAAGAGGAACTTTGCATGAAGATCTTTaGGGGTTCTGGAAGCAGACAAGGGTCTCAGTAATAGTGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: RFTGVLERGTLHEDL*GFWKQTRVSVIVEP Trigger: TGGTTCCACTATTACTGAGACCCTTGTCTGCTTCCAGAACCCCAAAAGATCTTCATGCAAAGTTCCTCTTTCCAGTACTCCTGTAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CAA 90 bp | AGCACTCACTATGATAGATTTACAGGAGTACTGGAAAGAGGAACTTaGCATGAAGATCTTTTGGGGTTCTGGAAGCAGACAAGGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: STHYDRFTGVLERGT*HEDLLGFWKQTRVS Trigger: TGAGACCCTTGTCTGCTTCCAGAACCCCAAAAGATCTTCATGCAAAGTTCCTCTTTCCAGTACTCCTGTAAATCTATCATAGTGAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR TCA 90 bp | GATACAGTTTTGTGTGGTCACTACTGTGTGCAAGCACATGGAGGTCAGAGGTCAGTGTTGATGCATGGCTaGATTTATCTTAATTCACCT | + |
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Preference number: 2 (lower is better) Translates to: DTVLCGHYCVQAHGGQRSVLMHG*IYLNSP Trigger: AGGTGAATTAAGATAAATTCAGCCATGCATCAACAC...TGACCTCTGACCTCCATGTGCTTGCACACAGTAGTGACCACACAAAACTGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR TCA 90 bp | GATACAGTTTTGTGTGGTCACTACTGTGTGCAAGCACATGGAGGTCAGAGGTCACAACCATCTAGCTTATaGGATCATGTTTTTCACTCA | + |
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Preference number: 2 (lower is better) Translates to: DTVLCGHYCVQAHGGQRSQPSSL*DHVFHS Trigger: TGAGTGAAAAACATGATCTCATAAGCTAGATGGTTG...TGACCTCTGACCTCCATGTGCTTGCACACAGTAGTGACCACACAAAACTGTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CCA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTCTTGAGCAATCAAGGTaGGTTAACACTGCTCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSLEQSR*VNTALN Trigger: ATTTAGAGCAGTGTTAACCCACCTTGATTGCTCAAG...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CCA 90 bp | GATACAGTTTTGTGTGGTCACTACTGTGTGCAAGCACATGGAGGTCAGAGGTCACAGAGTAGAACCTTTTaGAACTCGAGTTATTGCATT | + |
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Preference number: 2 (lower is better) Translates to: DTVLCGHYCVQAHGGQRSQSRTF*NSSYCI Trigger: AATGCAATAACTCGAGTTCCAAAAGGTTCTACTCTG...TGACCTCTGACCTCCATGTGCTTGCACACAGTAGTGACCACACAAAACTGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR GCA 72 bp | AGACCTGGAGCCCATCCATGTAGCGTGGCTGGCCTCTaGCTCGTGAGCACTGGGGTTATAGGCATACCACTA | + |
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Preference number: 3 (lower is better) Translates to: RPGAHPCSVAGL*LVSTGVIGIPL Trigger: TAGTGGTATGCCTATAACCCCAGTGCTCACGAGGCAGAGGCCAGCCACGCTACATGGATGGGCTCCAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGGAGCCCATCCATGTAGCGTGGCTGGCCTCTGCCTCGTGAGCACTGGGGTTATAGAACTTGGGTCCTaGTGTTTAGAAGCGCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: PGAHPCSVAGLCLVSTGVIELGS*CLEALF Trigger: GAAAAGCGCTTCTAAACACAAGGACCCAAGTTCTAT...AACCCCAGTGCTCACGAGGCAGAGGCCAGCCACGCTACATGGATGGGCTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGGAGCCCATCCATGTAGCGTGGCTGGCCTCTGCCTCGTGAGCACTGGGGTTTTGGAACTCGAGTTATaGCATTATAGTTCCCCATTT | + |
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Preference number: 3 (lower is better) Translates to: PGAHPCSVAGLCLVSTGVLELEL*HYSSPF Trigger: AAATGGGGAACTATAATGCAATAACTCGAGTTCCAA...AACCCCAGTGCTCACGAGGCAGAGGCCAGCCACGCTACATGGATGGGCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR GCA 72 bp | CCATGTGGGATACAGTTTTGTGTGGTCACTACTGTGTaGAAGCACATGGAGGTCAGAGGTCAAGGGTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: PCGIQFCVVTTV*KHMEVRGQGLP Trigger: GGGCAACCCTTGACCTCTGACCTCCATGTGCTTGCACACAGTAGTGACCACACAAAACTGTATCCCACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR GCA 72 bp | AGAGACCGACCACTCCACAAGAAAGTGCTGCGCTCCTaGGGCTTCCGTAAAATCAAGACGACTTCCCAAATT | + |
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Preference number: 3 (lower is better) Translates to: RDRPLHKKVLRS*GFRKIKTTSQI Trigger: AATTTGGGAAGTCGTCTTGATTTTACGGAAGCCGCAGGAGCGCAGCACTTTCTTGTGGAGTGGTCGGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CCA 72 bp | TCAACCGGTGGTACACCCGCTCAGCCCTCACCGTTCTaGATGCGCGTTTTAGAAACTAGGGACAAAATTCAA | + |
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Preference number: 3 (lower is better) Translates to: STGGTPAQPSPF*MRVLETRDKIQ Trigger: TTGAATTTTGTCCCTAGTTTCTAAAACGCGCATCCAGAACGGTGAGGGCTGAGCGGGTGTACCACCGGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CAA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTAGACGACTTCCCAAATaGAGGCAAGGGAGAGGAGCG | + |
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Preference number: 3 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSRRLPK*RQGRGA Trigger: CGCTCCTCTCCCTTGCCTCAATTTGGGAAGTCGTCT...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR GCA 72 bp | ACCTGTGCCTTTCTGCCCATGGTGAAGCTGTTACAATaGTGTCCCTTTTTGTGGTCTAGCCAGATCCACAGT | + |
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Preference number: 3 (lower is better) Translates to: TCAFLPMVKLLQ*CPFLWSSQIHS Trigger: ACTGTGGATCTGGCTAGACCACAAAAAGGGACAGCATTGTAACAGCTTCACCATGGGCAGAAAGGCACAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CCA 72 bp | TACAGTTTTGTGTGGTCACTACTGTGTGCAAGCACATaGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCA | + |
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Preference number: 3 (lower is better) Translates to: YSFVWSLLCAST*RSEVKGCPTQS Trigger: TGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTGCTTGCACACAGTAGTGACCACACAAAACTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CCA 72 bp | TATCTGTTAGCTGGGAAACACAGACTTGGCATGGGTTaGAGAACACCATGTGGGATACAGTTTTGTGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: YLLAGKHRLGMG*RTPCGIQFCVV Trigger: GACCACACAAAACTGTATCCCACATGGTGTTCTCCAACCCATGCCAAGTCTGTGTTTCCCAGCTAACAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CAA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTCTGGAAAGAGGAACTTaGCATGAAGATCTTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSLERGT*HEDLLG Trigger: CCCCAAAAGATCTTCATGCAAAGTTCCTCTTTCCAG...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR TCA 72 bp | ATGTGGAGGTCCAACTTCAGACAACCATCTAGCTTATaGGATCATGTTTTTCACTCAGACCTGGAGCCCATC | + |
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Preference number: 3 (lower is better) Translates to: MWRSNFRQPSSL*DHVFHSDLEPI Trigger: GATGGGCTCCAGGTCTGAGTGAAAAACATGATCTCATAAGCTAGATGGTTGTCTGAAGTTGGACCTCCACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR GCA 72 bp | TTTTCCAAGAGCCCTCTCAATACCATGGGACAAGAATaGCAGTTTCAGCAGCCTTTAGTTCTGGTAAGATGC | + |
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Preference number: 3 (lower is better) Translates to: FSKSPLNTMGQE*QFQQPLVLVRC Trigger: GCATCTTACCAGAACTAAAGGCTGCTGAAACTGGCATTCTTGTCCCATGGTATTGAGAGGGCTCTTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR GCA 72 bp | CTGTGTGCAAGCACATGGAGGTCAGAGGTCAAGGGTTaGCCTACTCAATCATATTCTCCTTTTCTTCAAACA | + |
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Preference number: 3 (lower is better) Translates to: LCASTWRSEVKG*PTQSYSPFLQT Trigger: TGTTTGAAGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTGCTTGCACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR TCA 72 bp | AGCTACCTTTGGCTTAAATTACCCCAAATCTGCAGATaGATGTGGAGGTCCAACTTCAGACAACCATCTAGC | + |
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Preference number: 3 (lower is better) Translates to: SYLWLKLPQICR*MWRSNFRQPSS Trigger: GCTAGATGGTTGTCTGAAGTTGGACCTCCACATTCATCTGCAGATTTGGGGTAATTTAAGCCAAAGGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR CCA 72 bp | GAAAGAGGAACTTTGCATGAAGATCTTTTGGGGTTCTaGAAGCAGACAAGGGTCTCAGTAATAGTGGAACCA | + |
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Preference number: 3 (lower is better) Translates to: ERGTLHEDLLGF*KQTRVSVIVEP Trigger: TGGTTCCACTATTACTGAGACCCTTGTCTGCTTCCAGAACCCCAAAAGATCTTCATGCAAAGTTCCTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| 3UTR-3UTR CAA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTGTTAATGAGACAGACTaGAAGTGGTTTATTCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSVNETD*KWFILA Trigger: TGCCAGAATAAACCACTTCAAGTCTGTCTCATTAAC...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR-3UTR CAA 90 bp | GGGATAGTTTTCTTCCTTGTGAAGAAAGTCCTCCCTTTTACCAATAGGGCTAACTTGCATGAAGATCTTTaGGGGTTCTGGAAGCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GIVFFLVKKVLPFTNRANLHEDL*GFWKQT Trigger: TGTCTGCTTCCAGAACCCCAAAAGATCTTCATGCAA...GTTAGCCCTATTGGTAAAAGGGAGGACTTTCTTCACAAGGAAGAAAACTATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR GCA 72 bp | CAGCTCATGTGCTTAAATACTGGCACCATACATACGTaGCTTGGGAAATATCTGATGGGATTACAGCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: QLMCLNTGTIHT*LGKYLMGLQQS Trigger: AGATTGCTGTAATCCCATCAGATATTTCCCAAGGCACGTATGTATGGTGCCAGTATTTAAGCACATGAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR CCA 72 bp | ACATGTGGTCATGGTTCAGCTCATGTGCTTAAATACTaGCACCATACATACGTGCCTTGGGAAATATCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: TCGHGSAHVLKY*HHTYVPWEISD Trigger: ATCAGATATTTCCCAAGGCACGTATGTATGGTGCCAGTATTTAAGCACATGAGCTGAACCATGACCACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR TCA 72 bp | TGGGTTAACACTGCTCTAAATAGGTTTCCTCCTTTCTaGGGAGGAAATGTCTTAGCATCAGACACAAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: WVNTALNRFPPF*GGNVLASDTKN Trigger: ATTCTTTGTGTCTGATGCTAAGACATTTCCTCCTCAGAAAGGAGGAAACCTATTTAGAGCAGTGTTAACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR GCA 72 bp | ATGATAGATTTACAGGAGTACTGGAAAGAGGAACTTTaGATGAAGATCTTTTGGGGTTCTGGAAGCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: MIDLQEYWKEEL*MKIFWGSGSRQ Trigger: TTGTCTGCTTCCAGAACCCCAAAAGATCTTCATGCAAAGTTCCTCTTTCCAGTACTCCTGTAAATCTATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR CCA 72 bp | TTTCTATTTAGGAACCCTGAACTTGAGCAATCAAGGTaGGTTAACACTGCTCTAAATAGGTTTCCTCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLFRNPELEQSR*VNTALNRFPPF Trigger: GAAAGGAGGAAACCTATTTAGAGCAGTGTTAACCCACCTTGATTGCTCAAGTTCAGGGTTCCTAAATAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR TCA 72 bp | TCTCAAACAGCACCGTTTCCAAATATGTACACGATATaGTTAAGCCTTGGCACAGTTAATTTTAAGGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: SQTAPFPNMYTI*LSLGTVNFKDW Trigger: CCAATCCTTAAAATTAACTGTGCCAAGGCTTAATCATATCGTGTACATATTTGGAAACGGTGCTGTTTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR TCA 72 bp | GTGCCTTGGGAAATATCTGATGGGATTACAGCAATCTaGCTTGATTTTGCTTTTGACATTGAGAATACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VPWEISDGITAI*LDFAFDIENTF Trigger: AAAGGTATTCTCAATGTCAAAAGCAAAATCAAGTCAGATTGCTGTAATCCCATCAGATATTTCCCAAGGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR TCA 72 bp | TTTATAACATTGCATTCCAAGCCTTCCTCTACTTCCTaGGTGTCAGGATTAAAGGATTGGTTATTTTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FITLHSKPSSTS*VSGLKDWLFLG Trigger: CCCTAAAAATAACCAATCCTTTAATCCTGACACTCAGGAAGTAGAGGAAGGCTTGGAATGCAATGTTATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGCCCATCCATGTAGCGTGGCTGGCCTCTGCCTCGTGAGCACTGGGGTTCTGAAGGGCTGCGGGTaGACCGGGCCCGAGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGAHPCSVAGLCLVSTGVLKGCG*TGPEAL Trigger: GAGCGCCTCGGGCCCGGTGCACCCGCAGCCCTTCAG...AACCCCAGTGCTCACGAGGCAGAGGCCAGCCACGCTACATGGATGGGCTCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCCCATCCATGTAGCGTGGCTGGCCTCTGCCTCGTGAGCACTGGGGTTGCGGCGGGGCGAGCGTaGCGCCCAAGGGAAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGAHPCSVAGLCLVSTGVAAGRA*RPRESL Trigger: GAGGCTTTCCCTTGGGCGCCACGCTCGCCCCGCCGC...AACCCCAGTGCTCACGAGGCAGAGGCCAGCCACGCTACATGGATGGGCTCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR GCA 90 bp | GCCTCCCATCTAGGACAGAAACAAGCCACGAGGAAGAACACCCTCTCAATACTGCACTTCGGCCGTGGATaGGGCGGCGGCGGTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASHLGQKQATRKNTLSILHFGRG*GGGGGG Trigger: TCCACCACCGCCGCCGCCGCATCCACGGCCGAAGTG...CAGTATTGAGAGGGTGTTCTTCCTCGTGGCTTGTTTCTGTCCTAGATGGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR TCA 90 bp | CCATACCTGGAGCTAGACTGCCTTGCTAGTGTCCCCAGTGATGCAATCATAGCTAGTCGTTCCAGGAGCTaGAGGGCTGCGGGTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: PYLELDCLASVPSDAIIASRSRS*RAAGAP Trigger: CGGTGCACCCGCAGCCCTTCAGCTCCTGGAACGACT...AGCTATGATTGCATCACTGGGGACACTAGCAAGGCAGTCTAGCTCCAGGTATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CCA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTCGGTGGTGGAGGCGGTaGGCGCGCAGCCCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSRWWRR*ARSPAE Trigger: TTCTGCTGGGCTGCGCGCCCACCGCCTCCACCACCG...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CCA 90 bp | CCATACCTGGAGCTAGACTGCCTTGCTAGTGTCCCCAGTGATGCAATCATAGCTAGCGCAGCTTCTTGCTaGGCAGGCTGTCCCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PYLELDCLASVPSDAIIASAASC*AGCPCC Trigger: GCAACAGGGACAGCCTGCCCAGCAAGAAGCTGCGCT...AGCTATGATTGCATCACTGGGGACACTAGCAAGGCAGTCTAGCTCCAGGTATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTGGCCGTCCGGGCCCTTaGGGATGTGTGTGGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAHGGQRSRVALLNHILLGRPGP*GCVWCR Trigger: TCTACACCACACACATCCTCAAGGGCCCGGACGGCC...AAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTTGGGAAATATCTGATGGGATTACAGCAATCTGACTTGATTTTGCTTTTGGTGCGTTGTCGCCGCTaGCGCCGCACAGGGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CLGKYLMGLQQSDLILLLVRCRR*RRTGGT Trigger: CGTGCCCCCTGTGCGGCGCCAGCGGCGACAACGCAC...CAAAAGCAAAATCAAGTCAGATTGCTGTAATCCCATCAGATATTTCCCAAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR CAA 72 bp | CCTGCGGCTTCCGTAAAATCAAGACGACTTCCCAAATaGAGGCAAGGGAGAGGAGCGCAGGTTTCAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PAASVKSRRLPK*RQGRGAQVSGV Trigger: TACACCTGAAACCTGCGCTCCTCTCCCTTGCCTCAATTTGGGAAGTCGTCTTGATTTTACGGAAGCCGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR GCA 90 bp | TGCCTTGGGAAATATCTGATGGGATTACAGCAATCTGACTTGATTTTGCTTTTGCAGGAGCTGAAGGGCTaGGGGTGCACCGGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLGKYLMGLQQSDLILLLQELKG*GCTGPE Trigger: CTCGGGCCCGGTGCACCCGCAGCCCTTCAGCTCCTG...CAAAAGCAAAATCAAGTCAGATTGCTGTAATCCCATCAGATATTTCCCAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCTAGACTGCCTTGCTAGTGTCCCCAGTGATGCAATCATAGCTACCTTTCAAAACACACACACCTaGAGCTCCGGTTTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LELDCLASVPSDAIIATFQNTHT*SSGFSR Trigger: TCTGCTGAAACCGGAGCTTCAGGTGTGTGTGTTTTG...AAAGGTAGCTATGATTGCATCACTGGGGACACTAGCAAGGCAGTCTAGCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR GCA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTATACTTGATGGTATGTaGGTTGTCGCCGCTGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSILDGM*VVAAGA Trigger: GGCGCCAGCGGCGACAACGCACATACCATCAAGTAT...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR CAA 72 bp | TGGCATGGGTTGGAGAACACCATGTGGGATACAGTTTaGTGTGGTCACTACTGTGTGCAAGCACATGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WHGLENTMWDTV*CGHYCVQAHGG Trigger: ACCTCCATGTGCTTGCACACAGTAGTGACCACACAAAACTGTATCCCACATGGTGTTCTCCAACCCATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR CAA 72 bp | ACTGTGTGCAAGCACATGGAGGTCAGAGGTCAAGGGTaGCCCTACTCAATCATATTCTCCTTTTCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVCKHMEVRGQG*PYSIIFSFSSN Trigger: GTTTGAAGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTGCTTGCACACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| 3UTR CAA 72 bp | TATGATAGATTTACAGGAGTACTGGAAAGAGGAACTTaGCATGAAGATCTTTTGGGGTTCTGGAAGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YDRFTGVLERGT*HEDLLGFWKQT Trigger: TGTCTGCTTCCAGAACCCCAAAAGATCTTCATGCAAAGTTCCTCTTTCCAGTACTCCTGTAAATCTATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS CCA 90 bp | CTTCGCGCGGCGTCACTTCGGCCGTGGATGCGGCGGCGGCGGTGGTaGAGGCGGTGGGCGCGCAGCCCAGCAGAACCGCGGCGGCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRAASLRPWMRRRRW*RRWARSPAEPRRRA Trigger: GGCGCGCCGCCGCGGTTCTGCTGGGCTGCGCGCCCACCGCCTCCACCACCGCCGCCGCCGCATCCACGGCCGAAGTGACGCCGCGCGAAG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS CCA 90 bp | CCCGGAAGCCGCGTGCAGACGAGGCTCGGCAGCCCACGCAGGGCTTaGCTCTTCGCGCGGCGTCACTTCGGCCGTGGATGCGGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSRVQTRLGSPRRA*LFARRHFGRGCGGG Trigger: GCCGCCGCCGCATCCACGGCCGAAGTGACGCCGCGCGAAGAGCCAAGCCCTGCGTGGGCTGCCGAGCCTCGTCTGCACGCGGCTTCCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS GCA 90 bp | GGAGGCGGTGGGCGCGCAGCCCAGCAGAACCGCGGCGGCGCGCCCTaGAAACGGGTTCAGCTCAGCGAAGCGCTCCTCCAGCAACCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGGGRAAQQNRGGAP*KRVQLSEALLQQPG Trigger: CCCGGGTTGCTGGAGGAGCGCTTCGCTGAGCTGAACCCGTTTGCAGGGCGCGCCGCCGCGGTTCTGCTGGGCTGCGCGCCCACCGCCTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS GCA 90 bp | AGCTCCGGTTTCAGCAGACGTGCGGCGGTCGCCCCGGAAGCCGCGTaGAGACGAGGCTCGGCAGCCCACGCAGGGCTTGGCTCTTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSGFSRRAAVAPEAA*RRGSAAHAGLGSSR Trigger: GCGCGAAGAGCCAAGCCCTGCGTGGGCTGCCGAGCCTCGTCTGCACGCGGCTTCCGGGGCGACCGCCGCACGTCTGCTGAAACCGGAGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS TCA 90 bp | GCGGGCGGACGGTGGGCGGTGGCACTTTGGAGAGCGGGCAATACTTaGTGGTATGTGCGTTGTCGCCGCTGGCGCCGCACAGGGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: AGGRWAVALWRAGNT*WYVRCRRWRRTGGT Trigger: CGTGCCCCCTGTGCGGCGCCAGCGGCGACAACGCACATACCATCAAGTATTGCCCGCTCTCCAAAGTGCCACCGCCCACCGTCCGCCCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS TCA 90 bp | TGTAGCGGCGCAAGACCGGGCACAGCACCCGGCCGTCCGGGCCCTTaGGGATGTGTGTGGTGTAGAGCGCCACCGCCTCCTTGTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSGARPGTAPGRPGP*GCVWCRAPPPPCCS Trigger: GGAACAACAAGGAGGCGGTGGCGCTCTACACCACACACATCCTCAAGGGCCCGGACGGCCGGGTGCTGTGCCCGGTCTTGCGCCGCTACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS GCA 90 bp | GTTCCGGCAAAACACACACACCTGAAGCTCCGGTTTCAGCAGACGTaGGGCGGTCGCCCCGGAAGCCGCGTGCAGACGAGGCTCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPAKHTHLKLRFQQT*GGRPGSRVQTRLGS Trigger: GCTGCCGAGCCTCGTCTGCACGCGGCTTCCGGGGCGACCGCCGCACGTCTGCTGAAACCGGAGCTTCAGGTGTGTGTGTTTTGCCGGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS GCA 90 bp | GGTGGGCGGTGGCACTTTGGAGAGCGGGCAATACTTGATGGTATGTaGGTTGTCGCCGCTGGCGCCGCACAGGGGGCACGTGTAGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGRWHFGERAILDGM*VVAAGAAQGARVAA Trigger: CGCCGCTACACGTGCCCCCTGTGCGGCGCCAGCGGCGACAACGCACATACCATCAAGTATTGCCCGCTCTCCAAAGTGCCACCGCCCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS CCA 90 bp | CAGGCTGTCCCTGTTGCTGCGCGGCGGCGGGCGGACGGTGGGCGGTaGCACTTTGGAGAGCGGGCAATACTTGATGGTATGTGCGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QAVPVAARRRADGGR*HFGERAILDGMCVV Trigger: GACAACGCACATACCATCAAGTATTGCCCGCTCTCCAAAGTGCCACCGCCCACCGTCCGCCCGCCGCCGCGCAGCAACAGGGACAGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCATCTAGGACAGAAACAAGCCACGAGGAAGAACACCCTCTCAATACTGGCCACCGCCTCCTTGTaGTTCCGGCAAAACACACAC | + |
|
Preference number: 5 (lower is better) Translates to: ASHLGQKQATRKNTLSILATASL*FRQNTH Trigger: GTGTGTGTTTTGCCGGAACAACAAGGAGGCGGTGGC...CAGTATTGAGAGGGTGTTCTTCCTCGTGGCTTGTTTCTGTCCTAGATGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGGACAGAAACAAGCCACGAGGAAGAACACCCTCTCAATACTGGGAAGTGCGTGGGCGGTGGCACTTaGGAGAGCGGGCAATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRTETSHEEEHPLNTGKCVGGGT*ESGQYL Trigger: CAAGTATTGCCCGCTCTCCAAAGTGCCACCGCCCAC...GCACTTCCCAGTATTGAGAGGGTGTTCTTCCTCGTGGCTTGTTTCTGTCCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGGACAGAAACAAGCCACGAGGAAGAACACCCTCTCAATACTGGGAAGTGCAGCGCCACCGCCTCCTaGTTGTTCCGGCAAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: SRTETSHEEEHPLNTGKCSATAS*LFRQNT Trigger: TGTGTTTTGCCGGAACAACAAGGAGGCGGTGGCGCT...GCACTTCCCAGTATTGAGAGGGTGTTCTTCCTCGTGGCTTGTTTCTGTCCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CAA 90 bp | CACATGGAGGTCAGAGGTCAAGGGTTGCCCTACTCAATCATATTCTCCTTTTCTTTGATGGTATGTGCGTaGTCGCCGCTGGCGCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HMEVRGQGLPYSIIFSFSLMVCA*SPLAPH Trigger: GTGCGGCGCCAGCGGCGACAACGCACATACCATCAA...AGAAAAGGAGAATATGATTGAGTAGGGCAACCCTTGACCTCTGACCTCCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS-3UTR CAA 90 bp | TCTAGGACAGAAACAAGCCACGAGGAAGAACACCCTCTCAATACTGGGAAGTGCGAGAGCGGGCAATACTaGATGGTATGTGCGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRTETSHEEEHPLNTGKCESGQY*MVCALS Trigger: CGACAACGCACATACCATCAAGTATTGCCCGCTCTC...GCACTTCCCAGTATTGAGAGGGTGTTCTTCCTCGTGGCTTGTTTCTGTCCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS CAA 90 bp | CCCCGGAAGCCGCGTGCAGACGAGGCTCGGCAGCCCACGCAGGGCTaGGCTCTTCGCGCGGCGTCACTTCGGCCGTGGATGCGGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PRKPRADEARQPTQG*ALRAASLRPWMRRR Trigger: CCGCCGCCGCATCCACGGCCGAAGTGACGCCGCGCGAAGAGCCAAGCCCTGCGTGGGCTGCCGAGCCTCGTCTGCACGCGGCTTCCGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS GCA 72 bp | GGGCGCGCAGCCCAGCAGAACCGCGGCGGCGCGCCCTaGAAACGGGTTCAGCTCAGCGAAGCGCTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRAAQQNRGGAP*KRVQLSEALLQ Trigger: CTGGAGGAGCGCTTCGCTGAGCTGAACCCGTTTGCAGGGCGCGCCGCCGCGGTTCTGCTGGGCTGCGCGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS GCA 72 bp | TTCAGCAGACGTGCGGCGGTCGCCCCGGAAGCCGCGTaGAGACGAGGCTCGGCAGCCCACGCAGGGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSRRAAVAPEAA*RRGSAAHAGLG Trigger: GCCAAGCCCTGCGTGGGCTGCCGAGCCTCGTCTGCACGCGGCTTCCGGGGCGACCGCCGCACGTCTGCTGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS CCA 72 bp | CGCGTGCAGACGAGGCTCGGCAGCCCACGCAGGGCTTaGCTCTTCGCGCGGCGTCACTTCGGCCGTGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: RVQTRLGSPRRA*LFARRHFGRGC Trigger: GCATCCACGGCCGAAGTGACGCCGCGCGAAGAGCCAAGCCCTGCGTGGGCTGCCGAGCCTCGTCTGCACGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS CAA 72 bp | CCGCGTGCAGACGAGGCTCGGCAGCCCACGCAGGGCTaGGCTCTTCGCGCGGCGTCACTTCGGCCGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: PRADEARQPTQG*ALRAASLRPWM Trigger: CATCCACGGCCGAAGTGACGCCGCGCGAAGAGCCAAGCCCTGCGTGGGCTGCCGAGCCTCGTCTGCACGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS CAA 90 bp | GGCGGGCGGACGGTGGGCGGTGGCACTTTGGAGAGCGGGCAATACTaGATGGTATGTGCGTTGTCGCCGCTGGCGCCGCACAGGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GGRTVGGGTLESGQY*MVCALSPLAPHRGH Trigger: GTGCCCCCTGTGCGGCGCCAGCGGCGACAACGCACATACCATCAAGTATTGCCCGCTCTCCAAAGTGCCACCGCCCACCGTCCGCCCGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS TCA 72 bp | GCAAGACCGGGCACAGCACCCGGCCGTCCGGGCCCTTaGGGATGTGTGTGGTGTAGAGCGCCACCGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ARPGTAPGRPGP*GCVWCRAPPPP Trigger: AGGAGGCGGTGGCGCTCTACACCACACACATCCTCAAGGGCCCGGACGGCCGGGTGCTGTGCCCGGTCTTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS GCA 72 bp | AAACACACACACCTGAAGCTCCGGTTTCAGCAGACGTaGGGCGGTCGCCCCGGAAGCCGCGTGCAGACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KHTHLKLRFQQT*GGRPGSRVQTR Trigger: CCTCGTCTGCACGCGGCTTCCGGGGCGACCGCCGCACGTCTGCTGAAACCGGAGCTTCAGGTGTGTGTGTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
||
| CDS TCA 72 bp | CGGTGGGCGGTGGCACTTTGGAGAGCGGGCAATACTTaGTGGTATGTGCGTTGTCGCCGCTGGCGCCGCACA | + |
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Preference number: 6 (lower is better) Translates to: RWAVALWRAGNT*WYVRCRRWRRT Trigger: TGTGCGGCGCCAGCGGCGACAACGCACATACCATCAAGTATTGCCCGCTCTCCAAAGTGCCACCGCCCACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| CDS CAA 72 bp | ACGGTGGGCGGTGGCACTTTGGAGAGCGGGCAATACTaGATGGTATGTGCGTTGTCGCCGCTGGCGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: TVGGGTLESGQY*MVCALSPLAPH Trigger: GTGCGGCGCCAGCGGCGACAACGCACATACCATCAAGTATTGCCCGCTCTCCAAAGTGCCACCGCCCACCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| CDS GCA 72 bp | TGGCACTTTGGAGAGCGGGCAATACTTGATGGTATGTaGGTTGTCGCCGCTGGCGCCGCACAGGGGGCACGT | + |
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Preference number: 6 (lower is better) Translates to: WHFGERAILDGM*VVAAGAAQGAR Trigger: ACGTGCCCCCTGTGCGGCGCCAGCGGCGACAACGCACATACCATCAAGTATTGCCCGCTCTCCAAAGTGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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| CDS TCA 72 bp | ACCGCCTCCTTGTTGTTCCGGCAAAACACACACACCTaGAGCTCCGGTTTCAGCAGACGTGCGGCGGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: TASLLFRQNTHT*SSGFSRRAAVA Trigger: GGCGACCGCCGCACGTCTGCTGAAACCGGAGCTTCAGGTGTGTGTGTTTTGCCGGAACAACAAGGAGGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088237.6 |
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