Pregenerated sensors for NANOG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000012396Ensembl transcript IDs: ENSMUST00000012540.5, ENSMUST00000112580.8, ENSMUST00000112581.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACCAGGGGCTGGTGAGATGGCTCAGTGGATAAGAGCACCCGACTaGTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: KPGAGEMAQWIRAPD*SSEGQEFKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTCTTATCCACTGAGCCATCTCACCAGCCCCTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR GCA 90 bp | GCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTaGAGAGCTAGTTCAAAGACAATTAGAGCTATGCAGAGAAACCCT | + |
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Preference number: 1 (lower is better) Translates to: AKISGQISEFKARLV*RASSKTIRAMQRNP Trigger: AGGGTTTCTCTGCATAGCTCTAATTGTCTTTGAACTAGCTCTGCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGCTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACGGTGAGATGGCTCAGTaGATAAGAGCACCCGACTGC | + |
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Preference number: 2 (lower is better) Translates to: SELPSNSWSFCLILESSHGEMAQ*IRAPDC Trigger: GCAGTCGGGTGCTCTTATCCACTGAGCCATCTCACC...GTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAGCTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CCA 90 bp | CTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCACTAGCATGGGTGGGTaGGCGTGGGTAAGGGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LPSNSWSFCLILESSHHITSMGG*AWVRVF Trigger: GAACACCCTTACCCACGCCCACCCACCCATGCTAGT...GATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTGAAGGAACCTGGCTTTaGCCTGACTTTAAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: AKISGQISEFKARLVCRAEGTWL*PDFKPR Trigger: TCTGGGCTTAAAGTCAGGGCAAAGCCAGGTTCCTTC...AGCTCTGCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGCTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACAAGGCCAGGCTGGTCTaGAGAGCTAGTTCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SELPSNSWSFCLILESSHKARLV*RASSKT Trigger: TGTCTTTGAACTAGCTCTGCAGACCAGCCTGGCCTT...GTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAGCTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CCA 90 bp | CTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCATATGCCAGGTGTGGTaGTATGCCACCTTTGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LPSNSWSFCLILESSHHIICQVW*YATFGP Trigger: GGGACCAAAGGTGGCATACCACCACACCTGGCATAT...GATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGTGGTGGTATGCCACCTTTGGTCCCAGCATTCAGGAGGCAAAGATAAGTGAAGGAACCTGGCTTTaGCCTGACTTTAAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QVWWYATFGPSIQEAKISEGTWL*PDFKPR Trigger: TCTGGGCTTAAAGTCAGGGCAAAGCCAGGTTCCTTC...ACTTATCTTTGCCTCCTGAATGCTGGGACCAAAGGTGGCATACCACCACACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATACGTAACAAGATCTGACGCCCTCTTCGAAGGAACCTGGCTTTaGCCTGACTTTAAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QQPHGGSQPYVTRSDALFEGTWL*PDFKPR Trigger: TCTGGGCTTAAAGTCAGGGCAAAGCCAGGTTCCTTC...GAAGAGGGCGTCAGATCTTGTTACGTATGGTTGTGAGCCACCATGTGGTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATAACTAGCATGGGTGGGTaGGCGTGGGTAAGGGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SNSWSFCLILESSHHIVITSMGG*AWVRVF Trigger: GAACACCCTTACCCACGCCCACCCACCCATGCTAGT...TATAACGATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR GCA 90 bp | GTACAGGTTGGCCTTGAACTTATTGCATATCTGAGCTACCCTCAAACTCCTGGTCCAGGTGTGGTGGTATaGCACCTTTGGTCCCAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: VQVGLELIAYLSYPQTPGPGVVV*HLWSQH Trigger: ATGCTGGGACCAAAGGTGGCATACCACCACACCTGG...ACCAGGAGTTTGAGGGTAGCTCAGATATGCAATAAGTTCAAGGCCAACCTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CCA 90 bp | CTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGCTCAGAAGTTGAGTTaGTGCCCAGCATGTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LPSNSWSFCLILESSHHIAQKLS*CPACSK Trigger: CTTAGAACATGCTGGGCACCAACTCAACTTCTGAGC...GATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCAGAGCTAGTTCAAAGACAATTAGAGCTATGCAGAGAAACCCTGTCTTGGGTGAGATGGCTCAGTaGATAAGAGCACCCGACTGC | + |
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Preference number: 2 (lower is better) Translates to: VCRASSKTIRAMQRNPVLGEMAQ*IRAPDC Trigger: GCAGTCGGGTGCTCTTATCCACTGAGCCATCTCACC...CAAGACAGGGTTTCTCTGCATAGCTCTAATTGTCTTTGAACTAGCTCTGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR GCA 90 bp | GTACAGGTTGGCCTTGAACTTATTGCATATCTGAGCTACCCTCAAACTCCTGGTAATAAACAATATATATaGCAGGTGTGGTGGTATGCC | + |
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Preference number: 2 (lower is better) Translates to: VQVGLELIAYLSYPQTPGNKQYI*QVWWYA Trigger: GGCATACCACCACACCTGGCATATATATTGTTTATT...ACCAGGAGTTTGAGGGTAGCTCAGATATGCAATAAGTTCAAGGCCAACCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATAAATAAACAATATATATaGCAGGTGTGGTGGTATGCC | + |
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Preference number: 2 (lower is better) Translates to: SNSWSFCLILESSHHIVINKQYI*QVWWYA Trigger: GGCATACCACCACACCTGGCATATATATTGTTTATT...TATAACGATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATACTTTGTATATACTTTTGCTCAGAAGTTGAGTTaGTGCCCAGCATGTTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SVSSSRVATISLYFVYTFAQKLS*CPACSK Trigger: CTTAGAACATGCTGGGCACCAACTCAACTTCTGAGC...AAAAGTATATACAAAGTATAACGATATGGTGGCTACTCTCGAGGATGAGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR GCA 72 bp | GCTGGTGAGATGGCTCAGTGGATAAGAGCACCCGACTaGTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: AGEMAQWIRAPD*SSEGQEFKSQQ Trigger: TTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTCTTATCCACTGAGCCATCTCACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGAGCTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACAATAGAGCTCAGAAGTaGAGTTGGTGCCCAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: SELPSNSWSFCLILESSHNRAQK*SWCPAC Trigger: ACATGCTGGGCACCAACTCAACTTCTGAGCTCTATT...GTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAGCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR CCA 72 bp | ACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTaGTCCCAGCATTCAGGAGGCAAAGATAAGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TIYMPGVVVCHL*SQHSGGKDKWA Trigger: TGCCCACTTATCTTTGCCTCCTGAATGCTGGGACCAAAGGTGGCATACCACCACACCTGGCATATATATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CAA 90 bp | CTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCTTCAAGCACTTATTCTaGGGAAGGAGAGAGTATATG | + |
|
Preference number: 3 (lower is better) Translates to: LPSNSWSFCLILESSHHIFKHLF*GRREYM Trigger: CATATACTCTCTCCTTCCCAAGAATAAGTGCTTGAA...GATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGAATAGAGCTCAGAAGTaGAGTTGGTGCCCAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: SSTYSWEGESICTSLSPKNRAQK*SWCPAC Trigger: ACATGCTGGGCACCAACTCAACTTCTGAGCTCTATT...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR CCA 72 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTaGTATGCCACCTTTGGTCCCAGCATTCAGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RNRNKQYICQVW*YATFGPSIQEA Trigger: TGCCTCCTGAATGCTGGGACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| 3UTR CCA 72 bp | AATAGAAATAGAAATAAACAATATATATGCCAGGTGTaGTGGTATGCCACCTTTGGTCCCAGCATTCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: NRNRNKQYICQV*WYATFGPSIQE Trigger: CTCCTGAATGCTGGGACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | CAGGAGGCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCTGGCCGTTCCAGGACTaGGCGGTCCAGGCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QEAKISGQISEFKARLVCWPFQD*AVQAWL Trigger: CAGCCAGGCCTGGACCGCTCAGTCCTGGAACGGCCA...GCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGCCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | CAGGAGGCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCGCACACAGCTGGGCCTaGGAGAACACAGTCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: QEAKISGQISEFKARLVCAHSWA*ENTVRI Trigger: GATGCGGACTGTGTTCTCTCAGGCCCAGCTGTGTGC...GCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | ACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACGCACACAGCTGGGCCTaGGAGAACACAGTCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: TALPKVRSSNPSNHMVAHAHSWA*ENTVRI Trigger: GATGCGGACTGTGTTCTCTCAGGCCCAGCTGTGTGC...GTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR GCA 90 bp | CAGGTGTGGTGGTATGCCACCTTTGGTCCCAGCATTCAGGAGGCAAAGATAAGTCGGTCCAGGCCTGGCTaGTCCAAGTTGGGTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QVWWYATFGPSIQEAKISRSRPG*SKLGWS Trigger: GGACCAACCCAACTTGGAGCAGCCAGGCCTGGACCG...ACTTATCTTTGCCTCCTGAATGCTGGGACCAAAGGTGGCATACCACCACACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTGGGTTGGTCCAAGTCTaGCTGCCCCACATGGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: AKISGQISEFKARLVCRAGLVQV*LPHMER Trigger: CCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCC...AGCTCTGCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | GCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTTCTGAAACCTGTCCTTaGGTGCACACAGCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AKISGQISEFKARLVCRASETCP*VHTAGP Trigger: AGGCCCAGCTGTGTGCACTCAAGGACAGGTTTCAGA...AGCTCTGCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGTGGCCGTTCCAGGACTaGGCGGTCCAGGCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSTYSWEGESICTSLSPKWPFQD*AVQAWL Trigger: CAGCCAGGCCTGGACCGCTCAGTCCTGGAACGGCCA...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR GCA 90 bp | GCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTTGGTCCAAGTCTGGCTaGCCCACATGGAAAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AKISGQISEFKARLVCRAWSKSG*PTWKGF Trigger: GAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCA...AGCTCTGCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR GCA 90 bp | CTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTAGTTCAAAGACAATTAGAGCTACGGTCCAGGCCTGGCTaGTCCAAGTTGGGTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSSRPGWSAELVQRQLELRSRPG*SKLGWS Trigger: GGACCAACCCAACTTGGAGCAGCCAGGCCTGGACCG...TAGCTCTAATTGTCTTTGAACTAGCTCTGCAGACCAGCCTGGCCTTGAACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR CCA 90 bp | GCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTTCTGGCTGCCCCACATaGAAAGGCTTCCAGATGCGT | + |
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Preference number: 4 (lower is better) Translates to: AKISGQISEFKARLVCRASGCPT*KGFQMR Trigger: ACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGA...AGCTCTGCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | CTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTAGTTCAAAGACAATTAGAGCTAGCACACAGCTGGGCCTaGGAGAACACAGTCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: LSSRPGWSAELVQRQLELAHSWA*ENTVRI Trigger: GATGCGGACTGTGTTCTCTCAGGCCCAGCTGTGTGC...TAGCTCTAATTGTCTTTGAACTAGCTCTGCAGACCAGCCTGGCCTTGAACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | TCTGAGCTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACGGTGCTGAGCCCTTCTaGATCAGACCATTGCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: SELPSNSWSFCLILESSHGAEPF*IRPLLV Trigger: GACTAGCAATGGTCTGATTCAGAAGGGCTCAGCACC...GTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAGCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR GCA 90 bp | TCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATGGTCCAAGTCTGGCTaGCCCACATGGAAAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSEGQEFKSQQPHGGSQPWSKSG*PTWKGF Trigger: GAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCA...TGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGGCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCGCATCTTCTGCTTCCTaGCAAGGACCTTGTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QEAKISGQISEFKARLVCASSAS*QGPCSP Trigger: AGGAGAACAAGGTCCTTGCCAGGAAGCAGAAGATGC...GCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGCCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR CCA 90 bp | CTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCTCTGGCTGCCCCACATaGAAAGGCTTCCAGATGCGT | + |
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Preference number: 4 (lower is better) Translates to: LPSNSWSFCLILESSHHISGCPT*KGFQMR Trigger: ACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGA...GATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATACGTAACAAGATCTGACGCCCTCTTCGGTGCTGAGCCCTTCTaGATCAGACCATTGCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: QQPHGGSQPYVTRSDALFGAEPF*IRPLLV Trigger: GACTAGCAATGGTCTGATTCAGAAGGGCTCAGCACC...GAAGAGGGCGTCAGATCTTGTTACGTATGGTTGTGAGCCACCATGTGGTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR TCA 90 bp | CTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGGTGCTGAGCCCTTCTaGATCAGACCATTGCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: LPSNSWSFCLILESSHHIGAEPF*IRPLLV Trigger: GACTAGCAATGGTCTGATTCAGAAGGGCTCAGCACC...GATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR CCA 90 bp | TCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCAGAACTAGGCAAACTGTaGGGACCAGGAAGACCCACA | + |
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Preference number: 4 (lower is better) Translates to: SSEGQEFKSQQPHGGSQPELGKL*GPGRPT Trigger: TGTGGGTCTTCCTGGTCCCCACAGTTTGCCTAGTTC...TGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012540.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGATAAGTGGGCAGATCTCTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTGCATCTTCTGCTTCCTaGCAAGGACCTTGTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: AKISGQISEFKARLVCRAASSAS*QGPCSP Trigger: AGGAGAACAAGGTCCTTGCCAGGAAGCAGAAGATGC...AGCTCTGCAGACCAGCCTGGCCTTGAACTCAGAGATCTGCCCACTTATCTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS-3UTR CCA 90 bp | GTACAGGTTGGCCTTGAACTTATTGCATATCTGAGCTACCCTCAAACTCCTGGTGGGTTGGTCCAAGTCTaGCTGCCCCACATGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQVGLELIAYLSYPQTPGGLVQV*LPHMER Trigger: CCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCC...ACCAGGAGTTTGAGGGTAGCTCAGATATGCAATAAGTTCAAGGCCAACCTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR TCA 90 bp | CTACCCTCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCAGGTACTTCTGCTTCTaGAACCTGTCCTTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSNSWSFCLILESSHHIRYFCF*NLSLSA Trigger: TGCACTCAAGGACAGGTTTCAGAAGCAGAAGTACCT...GATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGAGGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTGGTTGGCCGTTCCAGGACTaGGCGGTCCAGGCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNRNKQYICQVWWYATFGWPFQD*AVQAWL Trigger: CAGCCAGGCCTGGACCGCTCAGTCCTGGAACGGCCA...ACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CCA 90 bp | TCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATATGTTCCAAGTTGGGTTaGTCCAGGTCTGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNSWSFCLILESSHHIVICSKLG*SRSGCS Trigger: GGAGCAGCCAGACCTGGACCAACCCAACTTGGAACA...TATAACGATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGTCTGAAACCTGTCCTTaGGTGCACACAGCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTYSWEGESICTSLSPKSETCP*VHTAGP Trigger: AGGCCCAGCTGTGTGCACTCAAGGACAGGTTTCAGA...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCAGAGCTAGTTCAAAGACAATTAGAGCTATGCAGAGAAACCCTGTCTTGTGGTCCAAGTCTGGCTaGCCCACATGGAAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCRASSKTIRAMQRNPVLWSKSG*PTWKGF Trigger: GAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCA...CAAGACAGGGTTTCTCTGCATAGCTCTAATTGTCTTTGAACTAGCTCTGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTAGTTCAAAGACAATTAGAGCTATGTGGGGTGCTAAAATaGGCATGGCTTTCCCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSRPGWSAELVQRQLELCGVLK*AWLSLV Trigger: CACTAGGGAAAGCCATGCGCATTTTAGCACCCCACA...TAGCTCTAATTGTCTTTGAACTAGCTCTGCAGACCAGCCTGGCCTTGAACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTCAAGGCCAGGCTGGTCTGCAGAGCTAGTTCAAAGACAATTAGAGCTAGCATCTTCTGCTTCCTaGCAAGGACCTTGTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSRPGWSAELVQRQLELASSAS*QGPCSP Trigger: AGGAGAACAAGGTCCTTGCCAGGAAGCAGAAGATGC...TAGCTCTAATTGTCTTTGAACTAGCTCTGCAGACCAGCCTGGCCTTGAACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGTCTGGCTGCCCCACATaGAAAGGCTTCCAGATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTYSWEGESICTSLSPKSGCPT*KGFQMR Trigger: ACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGA...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAGAGCTAGTTCAAAGACAATTAGAGCTATGCAGAGAAACCCTGTCTTGTGTTCCAAGTTGGGTTaGTCCAGGTCTGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCRASSKTIRAMQRNPVLCSKLG*SRSGCS Trigger: GGAGCAGCCAGACCTGGACCAACCCAACTTGGAACA...CAAGACAGGGTTTCTCTGCATAGCTCTAATTGTCTTTGAACTAGCTCTGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGAGCCCTGGGGATAGCTaGAATGGATGCTGGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: SSTYSWEGESICTSLSPKSPGDS*NGCWDT Trigger: AGTATCCCAGCATCCATTGCAGCTATCCCCAGGGCT...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTGGTCGGTCCAGGCCTGGCTaGTCCAAGTTGGGTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNRNKQYICQVWWYATFGRSRPG*SKLGWS Trigger: GGACCAACCCAACTTGGAGCAGCCAGGCCTGGACCG...ACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | TCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATATGTGGGGTGCTAAAATaGGCATGGCTTTCCCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNSWSFCLILESSHHIVICGVLK*AWLSLV Trigger: CACTAGGGAAAGCCATGCGCATTTTAGCACCCCACA...TATAACGATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGTGTGGGGTGCTAAAATaGGCATGGCTTTCCCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTYSWEGESICTSLSPKCGVLK*AWLSLV Trigger: CACTAGGGAAAGCCATGCGCATTTTAGCACCCCACA...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGAGGTACTTCTGCTTCTaGAACCTGTCCTTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTYSWEGESICTSLSPKRYFCF*NLSLSA Trigger: TGCACTCAAGGACAGGTTTCAGAAGCAGAAGTACCT...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATACTTTGTATATACTTTTGGGTTGGTCCAAGTCTaGCTGCCCCACATGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSSRVATISLYFVYTFGLVQV*LPHMER Trigger: CCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCC...AAAAGTATATACAAAGTATAACGATATGGTGGCTACTCTCGAGGATGAGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTGGTTGTTCCAAGTTGGGTTaGTCCAGGTCTGGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNRNKQYICQVWWYATFGCSKLG*SRSGCS Trigger: GGAGCAGCCAGACCTGGACCAACCCAACTTGGAACA...ACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATACTTTGTATATACTTTTAGCCCTGGGGATAGCTaGAATGGATGCTGGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: SVSSSRVATISLYFVYTFSPGDS*NGCWDT Trigger: AGTATCCCAGCATCCATTGCAGCTATCCCCAGGGCT...AAAAGTATATACAAAGTATAACGATATGGTGGCTACTCTCGAGGATGAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTGGTAGCCCTGGGGATAGCTaGAATGGATGCTGGGATACT | + |
|
Preference number: 4 (lower is better) Translates to: RNRNKQYICQVWWYATFGSPGDS*NGCWDT Trigger: AGTATCCCAGCATCCATTGCAGCTATCCCCAGGGCT...ACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATACTTTGTATATACTTTTGGAAAGGCTTCCAGATaGGTTCACCAGATAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSSSRVATISLYFVYTFGKASR*VHQIAL Trigger: CAGGGCTATCTGGTGAACGCATCTGGAAGCCTTTCC...AAAAGTATATACAAAGTATAACGATATGGTGGCTACTCTCGAGGATGAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTGGTAGCTGCAATGGATGCTaGGATACTCCACTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNRNKQYICQVWWYATFGSCNGC*DTPLVL Trigger: CAGCACCAGTGGAGTATCCCAGCATCCATTGCAGCT...ACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTGGTAGGTACTTCTGCTTCTaGAACCTGTCCTTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNRNKQYICQVWWYATFGRYFCF*NLSLSA Trigger: TGCACTCAAGGACAGGTTTCAGAAGCAGAAGTACCT...ACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTGGTGTTCCCAGAATTCGATaGTTCCTCAGAACTAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RNRNKQYICQVWWYATFGVPRIR*FLRTRQ Trigger: TTGCCTAGTTCTGAGGAAGCATCGAATTCTGGGAAC...ACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012540.5 |
||
| CDS CCA 90 bp | GGGTTGGTCCAGGTCTGGTTGTTCCAAGTTGGGTTGGTCCAGGTCTaGCTGCTCCAAGTTGGGTTGGTCCAAGTCTGGCTGCCCCACATG | + |
|
Preference number: 5 (lower is better) Translates to: GLVQVWLFQVGLVQV*LLQVGLVQVWLPHM Trigger: CATGTGGGGCAGCCAGACTTGGACCAACCCAACTTGGAGCAGCCAGACCTGGACCAACCCAACTTGGAACAACCAGACCTGGACCAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS GCA 90 bp | TGGGTTGGTCCAAGTCTGGCTGCCCCACATGGAAAGGCTTCCAGATaGGTTCACCAGATAGCCCTGGGGATAGCTGCAATGGATGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WVGPSLAAPHGKASR*VHQIALGIAAMDAG Trigger: CCCAGCATCCATTGCAGCTATCCCCAGGGCTATCTGGTGAACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS GCA 90 bp | TGGTCCAGGTCTGGCTGCTCCAAGTTGGGTTGGTCCAAGTCTGGCTaGCCCACATGGAAAGGCTTCCAGATGCGTTCACCAGATAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WSRSGCSKLGWSKSG*PTWKGFQMRSPDSP Trigger: AGGGCTATCTGGTGAACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCCAACTTGGAGCAGCCAGACCTGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS CCA 90 bp | TCTGGCTGCTCCAAGTTGGGTTGGTCCAAGTCTGGCTGCCCCACATaGAAAGGCTTCCAGATGCGTTCACCAGATAGCCCTGGGGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGCSKLGWSKSGCPT*KGFQMRSPDSPGDS Trigger: GCTATCCCCAGGGCTATCTGGTGAACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCCAACTTGGAGCAGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTGTGGTGGTATGCCACCTTTGGTCCCAGCATTCAGGAGGCAAAGATAAGTTCCTCCTCAGGGCCCTaGTCAGCCTCAGGACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QVWWYATFGPSIQEAKISSSSGP*SASGLE Trigger: CTCAAGTCCTGAGGCTGACAAGGGCCCTGAGGAGGA...ACTTATCTTTGCCTCCTGAATGCTGGGACCAAAGGTGGCATACCACCACACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS GCA 90 bp | TGGAAAGGCTTCCAGATGCGTTCACCAGATAGCCCTGGGGATAGCTaGAATGGATGCTGGGATACTCCACTGGTGCTGAGCCCTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WKGFQMRSPDSPGDS*NGCWDTPLVLSPSE Trigger: TTCAGAAGGGCTCAGCACCAGTGGAGTATCCCAGCATCCATTGCAGCTATCCCCAGGGCTATCTGGTGAACGCATCTGGAAGCCTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTGTGGTGGTATGCCACCTTTGGTCCCAGCATTCAGGAGGCAAAGATAAGTTTCCTGGCAAGGACCTaGTTCTCCTCCTCCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVWWYATFGPSIQEAKISFLART*FSSSSG Trigger: CCCTGAGGAGGAGGAGAACAAGGTCCTTGCCAGGAA...ACTTATCTTTGCCTCCTGAATGCTGGGACCAAAGGTGGCATACCACCACACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAGAATCAGGGCTGCCTaGAAGAGGCAGGTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TALPKVRSSNPSNHMVAHRIRAA*KRQVFR Trigger: TCTGAAGACCTGCCTCTTCAAGGCAGCCCTGATTCT...GTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCTTCCGAAGGTCAGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACTGTCAGCCTCAGGACTaGAGAGCTTTTGTTTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TALPKVRSSNPSNHMVAHCQPQD*RAFVWD Trigger: GTCCCAAACAAAAGCTCTCAAGTCCTGAGGCTGACA...GTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | GTACAGGTTGGCCTTGAACTTATTGCATATCTGAGCTACCCTCAAACTCCTGGTTCCTCCTCAGGGCCCTaGTCAGCCTCAGGACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQVGLELIAYLSYPQTPGSSSGP*SASGLE Trigger: CTCAAGTCCTGAGGCTGACAAGGGCCCTGAGGAGGA...ACCAGGAGTTTGAGGGTAGCTCAGATATGCAATAAGTTCAAGGCCAACCTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | TCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATATCCTCCTCAGGGCCCTaGTCAGCCTCAGGACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNSWSFCLILESSHHIVISSSGP*SASGLE Trigger: CTCAAGTCCTGAGGCTGACAAGGGCCCTGAGGAGGA...TATAACGATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | TCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATAAGAATCAGGGCTGCCTaGAAGAGGCAGGTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SNSWSFCLILESSHHIVIRIRAA*KRQVFR Trigger: TCTGAAGACCTGCCTCTTCAAGGCAGCCCTGATTCT...TATAACGATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGAGAATCAGGGCTGCCTaGAAGAGGCAGGTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTYSWEGESICTSLSPKRIRAA*KRQVFR Trigger: TCTGAAGACCTGCCTCTTCAAGGCAGCCCTGATTCT...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAACCACATGGTGGCTCACAACCATACGTAACAAGATCTGACGCCCTCTTCCTTGAGAGCTTTTGTTaGGGACTGGTAGAAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: QQPHGGSQPYVTRSDALFLESFC*GLVEES Trigger: TGATTCTTCTACCAGTCCCAAACAAAAGCTCTCAAG...GAAGAGGGCGTCAGATCTTGTTACGTATGGTTGTGAGCCACCATGTGGTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | TCAAACTCCTGGTCCTTCTGTCTCATCCTCGAGAGTAGCCACCATATCGTTATATGTCAGCCTCAGGACTaGAGAGCTTTTGTTTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SNSWSFCLILESSHHIVICQPQD*RAFVWD Trigger: GTCCCAAACAAAAGCTCTCAAGTCCTGAGGCTGACA...TATAACGATATGGTGGCTACTCTCGAGGATGAGACAGAAGGACCAGGAGTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGTGTCAGCCTCAGGACTaGAGAGCTTTTGTTTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSTYSWEGESICTSLSPKCQPQD*RAFVWD Trigger: GTCCCAAACAAAAGCTCTCAAGTCCTGAGGCTGACA...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGCACTTATTCTTGGGAAGGAGAGAGTATATGCACCTCACTGTCTCCAAAGGAAAAACTGCAGGCATaGATGAGGCGTTCCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSTYSWEGESICTSLSPKEKLQA*MRRSQN Trigger: ATTCTGGGAACGCCTCATCAATGCCTGCAGTTTTTC...CTTTGGAGACAGTGAGGTGCATATACTCTCTCCTTCCCAAGAATAAGTGCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012540.5 |
||
| CDS-3UTR CAA 90 bp | AGAAATAGAAATAAACAATATATATGCCAGGTGTGGTGGTATGCCACCTTTGGTTTCCTGGCAAGGACCTaGTTCTCCTCCTCCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RNRNKQYICQVWWYATFGFLART*FSSSSG Trigger: CCCTGAGGAGGAGGAGAACAAGGTCCTTGCCAGGAA...ACCAAAGGTGGCATACCACCACACCTGGCATATATATTGTTTATTTCTATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
||
| CDS TCA 72 bp | AGCGGAGCAGCATTCCAAGGCTGGCCGTTCCAGGACTaGGCGGTCCAGGCCTGGCTGCTCCAAGTTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SGAAFQGWPFQD*AVQAWLLQVGL Trigger: CAACCCAACTTGGAGCAGCCAGGCCTGGACCGCTCAGTCCTGGAACGGCCAGCCTTGGAATGCTGCTCCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS CCA 72 bp | CAGGTCTGGCTGCTCCAAGTTGGGTTGGTCCAAGTCTaGCTGCCCCACATGGAAAGGCTTCCAGATGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: QVWLLQVGLVQV*LPHMERLPDAF Trigger: GAACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCCAACTTGGAGCAGCCAGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS CCA 72 bp | TTGGGTTGGTCCAGGTCTGGCTGCTCCAAGTTGGGTTaGTCCAAGTCTGGCTGCCCCACATGGAAAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LGWSRSGCSKLG*SKSGCPTWKGF Trigger: GAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCCAACTTGGAGCAGCCAGACCTGGACCAACCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS GCA 72 bp | CCAAGTCTGGCTGCCCCACATGGAAAGGCTTCCAGATaGGTTCACCAGATAGCCCTGGGGATAGCTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: PSLAAPHGKASR*VHQIALGIAAM Trigger: CATTGCAGCTATCCCCAGGGCTATCTGGTGAACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS GCA 72 bp | TCTGGCTGCTCCAAGTTGGGTTGGTCCAAGTCTGGCTaGCCCACATGGAAAGGCTTCCAGATGCGTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: SGCSKLGWSKSG*PTWKGFQMRSP Trigger: TGGTGAACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCCAACTTGGAGCAGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS CCA 72 bp | CAGGTCTGGTTGTTCCAAGTTGGGTTGGTCCAGGTCTaGCTGCTCCAAGTTGGGTTGGTCCAAGTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QVWLFQVGLVQV*LLQVGLVQVWL Trigger: CAGCCAGACTTGGACCAACCCAACTTGGAGCAGCCAGACCTGGACCAACCCAACTTGGAACAACCAGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS GCA 72 bp | TTCCAGATGCGTTCACCAGATAGCCCTGGGGATAGCTaGAATGGATGCTGGGATACTCCACTGGTGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FQMRSPDSPGDS*NGCWDTPLVLS Trigger: GCTCAGCACCAGTGGAGTATCCCAGCATCCATTGCAGCTATCCCCAGGGCTATCTGGTGAACGCATCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS CCA 72 bp | TCCAAGTTGGGTTGGTCCAAGTCTGGCTGCCCCACATaGAAAGGCTTCCAGATGCGTTCACCAGATAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SKLGWSKSGCPT*KGFQMRSPDSP Trigger: AGGGCTATCTGGTGAACGCATCTGGAAGCCTTTCCATGTGGGGCAGCCAGACTTGGACCAACCCAACTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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| CDS CAA 90 bp | TTCTGCTTCCTGGCAAGGACCTTGTTCTCCTCCTCCTCAGGGCCCTaGTCAGCCTCAGGACTTGAGAGCTTTTGTTTGGGACTGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: FCFLARTLFSSSSGP*SASGLESFCLGLVE Trigger: TTCTACCAGTCCCAAACAAAAGCTCTCAAGTCCTGAGGCTGACAAGGGCCCTGAGGAGGAGGAGAACAAGGTCCTTGCCAGGAAGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012540.5 ENSMUST00000112580.8 ENSMUST00000112581.8 |
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