Pregenerated sensors for NAMPT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020572Ensembl transcript IDs: ENSMUST00000020886.9
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTACAGGTGACCTAGGAGTCACCTCAAAGAGACTGGTGTCTTGTTaGGTGCAATGGCTGACTCAGGACCTAGCAGTAAATCGCTATAAA | + |
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Preference number: 1 (lower is better) Translates to: PTGDLGVTSKRLVSC*VQWLTQDLAVNRYK Trigger: TTTATAGCGATTTACTGCTAGGTCCTGAGTCAGCCATTGCACTCAACAAGACACCAGTCTCTTTGAGGTGACTCCTAGGTCACCTGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 90 bp | AAATCCAAAATGAACCCGTTCCAAGGGGACTGGAGCCAAGAGACATaGCTCCTTCCATCTCTAGACCCATTCTGTGCACAAATGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: KSKMNPFQGDWSQET*LLPSLDPFCAQMEA Trigger: AGCTTCCATTTGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCCCCTTGGAACGGGTTCATTTTGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 90 bp | GCTAGCGAGCTCTCTGTGATTGTGTTTAGTGAACATTCCAGGCTTTaGGGACTATCTGGTCTCTATTGTAACTACTCTATTTCTGCCACC | + |
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Preference number: 1 (lower is better) Translates to: ASELSVIVFSEHSRL*GLSGLYCNYSISAT Trigger: GGTGGCAGAAATAGAGTAGTTACAATAGAGACCAGATAGTCCTCAAAGCCTGGAATGTTCACTAAACACAATCACAGAGAGCTCGCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 90 bp | GGAAACATCCTTAGACAGTGTGTAACTAAAAATGAAGAAGCAGTATaGAGTTGGCTGGCCAACCTTGGCTTAGAACTGTGTAGTGTCACC | + |
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Preference number: 1 (lower is better) Translates to: GNILRQCVTKNEEAV*SWLANLGLELCSVT Trigger: GGTGACACTACACAGTTCTAAGCCAAGGTTGGCCAGCCAACTTCATACTGCTTCTTCATTTTTAGTTACACACTGTCTAAGGATGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR GCA 90 bp | GAAGCTACTAGTTTATACTACATGCTTCTAAACAAAACTGGCATGTaGAGCCGGTGGAATTCACACAACACAAAAACACTGCTTGTAGTA | + |
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Preference number: 1 (lower is better) Translates to: EATSLYYMLLNKTGM*SRWNSHNTKTLLVV Trigger: TACTACAAGCAGTGTTTTTGTGTTGTGTGAATTCCACCGGCTGCACATGCCAGTTTTGTTTAGAAGCATGTAGTATAAACTAGTAGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 90 bp | AAAGATCAACACCAGATTGGATTACTATCTATTAGCAAAGGACCCTaGAAAGCTTGCTTCAGCATTAATCTTGTACATGGTTGTAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: KDQHQIGLLSISKGP*KACFSINLVHGCKC Trigger: ACACTTACAACCATGTACAAGATTAATGCTGAAGCAAGCTTTTCAGGGTCCTTTGCTAATAGATAGTAATCCAATCTGGTGTTGATCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR CCA 90 bp | GGACTGGAGCCAAGAGACATGACTCCTTCCATCTCTAGACCCATTCTGTGCACATGTTCGGAACTCTGTTaGGTGTCTGTCTGTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GLEPRDMTPSISRPILCTCSELC*VSVCPD Trigger: GTCAGGACAGACAGACACCCAACAGAGTTCCGAACA...TGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR CCA 90 bp | GGACTGGAGCCAAGAGACATGACTCCTTCCATCTCTAGACCCATTCTGTGCACATGCAGAACAGGCCTTTaGGATTTGGCATCACTGGTA | + |
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Preference number: 2 (lower is better) Translates to: GLEPRDMTPSISRPILCTCRTGL*DLASLV Trigger: TACCAGTGATGCCAAATCCCAAAGGCCTGTTCTGCA...TGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR TCA 90 bp | GGACTGGAGCCAAGAGACATGACTCCTTCCATCTCTAGACCCATTCTGTGCACAAATGAAGAAGCAGTATaGAGTTGGCTGGCCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: GLEPRDMTPSISRPILCTNEEAV*SWLANL Trigger: AAGGTTGGCCAGCCAACTTCATACTGCTTCTTCATT...TGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR TCA 90 bp | GGACTGGAGCCAAGAGACATGACTCCTTCCATCTCTAGACCCATTCTGTGCACAACACTGCTTGTAGTATaGCACCAATGGGTTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GLEPRDMTPSISRPILCTTLLVV*HQWVLC Trigger: ACACAAAACCCATTGGTGTCATACTACAAGCAGTGT...TGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR TCA 90 bp | TCTAAACAAAACTGGCATGTGCAGCCGGTGGAATTCACACAACACAAAAACACTAGACTGGTGTCTTGTTaGGTGCAATGGCTGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: SKQNWHVQPVEFTQHKNTRLVSC*VQWLTQ Trigger: CTGAGTCAGCCATTGCACTCAACAAGACACCAGTCT...AGTGTTTTTGTGTTGTGTGAATTCCACCGGCTGCACATGCCAGTTTTGTTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR GCA 90 bp | GGACTGGAGCCAAGAGACATGACTCCTTCCATCTCTAGACCCATTCTGTGCACAACATCTCTCTTAAAATaGAAACGCATGCTCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GLEPRDMTPSISRPILCTTSLLK*KRMLLF Trigger: GAAAAGGAGCATGCGTTTGCATTTTAAGAGAGATGT...TGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTCCCTTCCCAGAAAAACCAACATCTCTCTTAAAATGCAAACGCATGCTCGAACATTCCAGGCTTTaGGGACTATCTGGTCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: LPPFPEKPTSLLKCKRMLEHSRL*GLSGLY Trigger: ATAGAGACCAGATAGTCCTCAAAGCCTGGAATGTTC...GAGCATGCGTTTGCATTTTAAGAGAGATGTTGGTTTTTCTGGGAAGGGAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR CCA 90 bp | TCTAAACAAAACTGGCATGTGCAGCCGGTGGAATTCACACAACACAAAAACACTCAGGCCTTTGGGATTTaGCATCACTGGTACATACAC | + |
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Preference number: 2 (lower is better) Translates to: SKQNWHVQPVEFTQHKNTQAFGI*HHWYIH Trigger: GTGTATGTACCAGTGATGCCAAATCCCAAAGGCCTG...AGTGTTTTTGTGTTGTGTGAATTCCACCGGCTGCACATGCCAGTTTTGTTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR TCA 90 bp | TTCTACTGCCTACTTCAAAGTTATGAATTGAGGGGACTAATGTCAACTGCAAATCTAGCGAGCTCTCTGTaGTTGTGTTTAGTGAACATT | + |
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Preference number: 2 (lower is better) Translates to: FYCLLQSYELRGLMSTANLASSL*LCLVNI Trigger: AATGTTCACTAAACACAATCACAGAGAGCTCGCTAG...ATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR GCA 90 bp | GAATTCACACAACACAAAAACACTGCTTGTAGTATGACACCAATGGGTTTTGTGCACAGAACTGTACAATaGCTAAACATTCGCGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: EFTQHKNTACSMTPMGFVHRTVQ*LNIRVR Trigger: TCTTACGCGAATGTTTAGGCATTGTACAGTTCTGTG...CACAAAACCCATTGGTGTCATACTACAAGCAGTGTTTTTGTGTTGTGTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTACTGCCTACTTCAAAGTTATGAATTGAGGGGACTAATGTCAACTGCAAATAGATCATCTAAACACTaGGAGAAAAATAAAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: FYCLLQSYELRGLMSTANRSSKH*EKNKKG Trigger: GCCCTTTTTATTTTTCTCCCAGTGTTTAGATGATCT...ATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTACTGCCTACTTCAAAGTTATGAATTGAGGGGACTAATGTCAACTGCAAATCATTCTGTGCACAAATaGAAGCTACTAGTTTATACT | + |
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Preference number: 2 (lower is better) Translates to: FYCLLQSYELRGLMSTANHSVHK*KLLVYT Trigger: AGTATAAACTAGTAGCTTCCATTTGTGCACAGAATG...ATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 72 bp | ATGAACCCGTTCCAAGGGGACTGGAGCCAAGAGACATaGCTCCTTCCATCTCTAGACCCATTCTGTGCACAA | + |
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Preference number: 3 (lower is better) Translates to: MNPFQGDWSQET*LLPSLDPFCAQ Trigger: TTGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCCCCTTGGAACGGGTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 72 bp | GACCTAGGAGTCACCTCAAAGAGACTGGTGTCTTGTTaGGTGCAATGGCTGACTCAGGACCTAGCAGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: DLGVTSKRLVSC*VQWLTQDLAVN Trigger: ATTTACTGCTAGGTCCTGAGTCAGCCATTGCACTCAACAAGACACCAGTCTCTTTGAGGTGACTCCTAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR CCA 72 bp | GATGTTGGTTTCCGATCCCTGTGTCTACCTCATTTCTaGGATTACAGGCATTGTAGTGTATACACCATGACC | + |
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Preference number: 3 (lower is better) Translates to: DVGFRSLCLPHF*DYRHCSVYTMT Trigger: GGTCATGGTGTATACACTACAATGCCTGTAATCCCAGAAATGAGGTAGACACAGGGATCGGAAACCAACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 72 bp | GTGATGTTCGGAACTCTGTTGGGTGTCTGTCTGTCCTaGCATAATTTGCAAATGTACAACACCACAAACAAC | + |
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Preference number: 3 (lower is better) Translates to: VMFGTLLGVCLS*HNLQMYNTTNN Trigger: GTTGTTTGTGGTGTTGTACATTTGCAAATTATGTCAGGACAGACAGACACCCAACAGAGTTCCGAACATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 72 bp | ACCAATGGGTTTTGTGTAGTACTCTACAAGCCTTTGTaGAGAGGAGGAGACTCAAGGGTCTATTTAAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: TNGFCVVLYKPL*RGGDSRVYLSS Trigger: TGAGCTTAAATAGACCCTTGAGTCTCCTCCTCTTCACAAAGGCTTGTAGAGTACTACACAAAACCCATTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 72 bp | CTTAGACAGTGTGTAACTAAAAATGAAGAAGCAGTATaGAGTTGGCTGGCCAACCTTGGCTTAGAACTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LRQCVTKNEEAV*SWLANLGLELC Trigger: ACACAGTTCTAAGCCAAGGTTGGCCAGCCAACTTCATACTGCTTCTTCATTTTTAGTTACACACTGTCTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR CCA 72 bp | TACATGCTTCTAAACAAAACTGGCATGTGCAGCCGGTaGAATTCACACAACACAAAAACACTGCTTGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: YMLLNKTGMCSR*NSHNTKTLLVV Trigger: TACTACAAGCAGTGTTTTTGTGTTGTGTGAATTCCACCGGCTGCACATGCCAGTTTTGTTTAGAAGCATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 72 bp | TGGAATTCACACAACACAAAAACACTGCTTGTAGTATaGCACCAATGGGTTTTGTGTAGTACTCTACAAGCC | + |
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Preference number: 3 (lower is better) Translates to: WNSHNTKTLLVV*HQWVLCSTLQA Trigger: GGCTTGTAGAGTACTACACAAAACCCATTGGTGTCATACTACAAGCAGTGTTTTTGTGTTGTGTGAATTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR GCA 72 bp | AGTTTATACTACATGCTTCTAAACAAAACTGGCATGTaGAGCCGGTGGAATTCACACAACACAAAAACACTG | + |
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Preference number: 3 (lower is better) Translates to: SLYYMLLNKTGM*SRWNSHNTKTL Trigger: CAGTGTTTTTGTGTTGTGTGAATTCCACCGGCTGCACATGCCAGTTTTGTTTAGAAGCATGTAGTATAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTACTGCCTACTTCAAAGTTATGAATTGAGGGGACTAATGTCAACTGCAAATATTCATGTTAACCATTaGGTACTCAGAAGGGGGATG | + |
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Preference number: 3 (lower is better) Translates to: FYCLLQSYELRGLMSTANIHVNH*VLRRGM Trigger: CATCCCCCTTCTGAGTACCAAATGGTTAACATGAAT...ATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 72 bp | CTCTCTGTGATTGTGTTTAGTGAACATTCCAGGCTTTaGGGACTATCTGGTCTCTATTGTAACTACTCTATT | + |
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Preference number: 3 (lower is better) Translates to: LSVIVFSEHSRL*GLSGLYCNYSI Trigger: AATAGAGTAGTTACAATAGAGACCAGATAGTCCTCAAAGCCTGGAATGTTCACTAAACACAATCACAGAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| 3UTR TCA 72 bp | CAAATAACACAAATTCTACTGCCTACTTCAAAGTTATaGATTGAGGGGACTAATGTCAACTGCAAATCTAGT | + |
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Preference number: 3 (lower is better) Translates to: QITQILLPTSKL*IEGTNVNCKSS Trigger: ACTAGATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAATTTGTGTTATTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR GCA 90 bp | GGACTGGAGCCAAGAGACATGACTCCTTCCATCTCTAGACCCATTCTGTGCACAGAGCAGATGCCCCTATaGCAGCAGTCTCTTGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLEPRDMTPSISRPILCTEQMPL*QQSLAK Trigger: CTTCGCAAGAGACTGCTGGCATAGGGGCATCTGCTC...TGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR TCA 90 bp | TTCTACTGCCTACTTCAAAGTTATGAATTGAGGGGACTAATGTCAACTGCAAATTGGCCAGCAGGATGTTaGACTCGGCTTCTGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: FYCLLQSYELRGLMSTANWPAGC*TRLLPQ Trigger: CTGCGGCAGAAGCCGAGTTCAACATCCTGCTGGCCA...ATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR GCA 90 bp | TCTAAACAAAACTGGCATGTGCAGCCGGTGGAATTCACACAACACAAAAACACTGCCGTTATGGTACTGTaGTCTGCTGCTGGAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKQNWHVQPVEFTQHKNTAVMVL*SAAGTE Trigger: TTCTGTTCCAGCAGCAGAGCACAGTACCATAACGGC...AGTGTTTTTGTGTTGTGTGAATTCCACCGGCTGCACATGCCAGTTTTGTTTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR TCA 90 bp | TTCTACTGCCTACTTCAAAGTTATGAATTGAGGGGACTAATGTCAACTGCAAATTCTCTTGTAAAGTATTaGTATCCACGCCATCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FYCLLQSYELRGLMSTANSLVKY*YPRHLL Trigger: AAGGAGATGGCGTGGATATCAATACTTTACAAGAGA...ATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR CCA 90 bp | TTCTACTGCCTACTTCAAAGTTATGAATTGAGGGGACTAATGTCAACTGCAAATTTCTTGAAAACCGTATaGAGAAGATCATGGCCATAT | + |
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Preference number: 4 (lower is better) Translates to: FYCLLQSYELRGLMSTANFLKTV*RRSWPY Trigger: ATATGGCCATGATCTTCTCCATACGGTTTTCAAGAA...ATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR CAA 90 bp | GGACTGGAGCCAAGAGACATGACTCCTTCCATCTCTAGACCCATTCTGTGCACAGTGGCCAGCAGGATGTaGAACTCGGCTTCTGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: GLEPRDMTPSISRPILCTVASRM*NSASAA Trigger: TGCGGCAGAAGCCGAGTTCAACATCCTGCTGGCCAC...TGTGCACAGAATGGGTCTAGAGATGGAAGGAGTCATGTCTCTTGGCTCCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR CAA 90 bp | GAATTCACACAACACAAAAACACTGCTTGTAGTATGACACCAATGGGTTTTGTGTATGCCAGCAGTCTCTaGCGAAGAGACTCCTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: EFTQHKNTACSMTPMGFVYASSL*RRDSSV Trigger: TACAGAGGAGTCTCTTCGCAAGAGACTGCTGGCATA...CACAAAACCCATTGGTGTCATACTACAAGCAGTGTTTTTGTGTTGTGTGAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR CAA 90 bp | CTTCCTCCCTTCCCAGAAAAACCAACATCTCTCTTAAAATGCAAACGCATGCTCGATACTCCACTTCTTTaGTTTCATTCCCTCTACAAT | + |
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Preference number: 5 (lower is better) Translates to: LPPFPEKPTSLLKCKRMLDTPLL*FHSLYN Trigger: ATTGTAGAGGGAATGAAACAAAAGAAGTGGAGTATC...GAGCATGCGTTTGCATTTTAAGAGAGATGTTGGTTTTTCTGGGAAGGGAGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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| CDS-3UTR CAA 90 bp | TTCTACTGCCTACTTCAAAGTTATGAATTGAGGGGACTAATGTCAACTGCAAATATCTCTTGTAAAGTATaGATATCCACGCCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: FYCLLQSYELRGLMSTANISCKV*ISTPSP Trigger: AGGAGATGGCGTGGATATCAATACTTTACAAGAGAT...ATTTGCAGTTGACATTAGTCCCCTCAATTCATAACTTTGAAGTAGGCAGTAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020886.9 |
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