Pregenerated sensors for NAIP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078942Ensembl transcript IDs: ENSMUST00000042220.3, ENSMUST00000118574.8
Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATGCATGTGCTCCTGTAGGTGGAATGATCTGATGACCTGTGCTTaGCCTGTTAGCAGAGCAGGAAGATTCAAGAGTGACCCTGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: ACMCSCRWNDLMTCA*PVSRAGRFKSDPVR Trigger: TCTGACAGGGTCACTCTTGAATCTTCCTGCTCTGCTAACAGGCCAAGCACAGGTCATCAGATCATTCCACCTACAGGAGCACATGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR CCA 90 bp | TTCACAGCCAATACTAATTCCAGTCCCAAGATCCAACACCCTGTCTaGCCTCTGAGGGCAGCATGCAGACTTGTGGCACACATACGTATA | + |
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Preference number: 1 (lower is better) Translates to: FTANTNSSPKIQHPV*PLRAACRLVAHIRI Trigger: TATACGTATGTGTGCCACAAGTCTGCATGCTGCCCTCAGAGGCCAGACAGGGTGTTGGATCTTGGGACTGGAATTAGTATTGGCTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR CCA 90 bp | TTTGTAATGAAAATAATCAGAAAGGCATGGGATTTCCAGATATGGTaGCATCCCTCAGTAATAACAGCACTTGGGTGGCTGAGGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: FVMKIIRKAWDFQIW*HPSVITALGWLRQE Trigger: CTCCTGCCTCAGCCACCCAAGTGCTGTTATTACTGAGGGATGCCACCATATCTGGAAATCCCATGCCTTTCTGATTATTTTCATTACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR TCA 90 bp | ATGTGGTATGAAGATAATTTGAGCCAGTGGAATATGTTTGTTGCATaGAGTGGCTGCAGAATCCTCAGGTTCAGAGGCTGGACACTAAAG | + |
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Preference number: 1 (lower is better) Translates to: MWYEDNLSQWNMFVA*SGCRILRFRGWTLK Trigger: CTTTAGTGTCCAGCCTCTGAACCTGAGGATTCTGCAGCCACTTCATGCAACAAACATATTCCACTGGCTCAAATTATCTTCATACCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR CCA 90 bp | GCAGGAAGATTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATaGCAAAGAATGGGTTACTCCATGAATTCATTCTATTCATTTCTG | + |
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Preference number: 1 (lower is better) Translates to: AGRFKSDPVRTMGRQ*QRMGYSMNSFYSFL Trigger: CAGAAATGAATAGAATGAATTCATGGAGTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAATCTTCCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR CCA 90 bp | TTGATGTTAAAATTTAAGTCAGTTGTATGCTTGCATGAGTGTGTGTaGTCTGTGTGTGTCTGTGTGCTTTCATGTGTGTGTGTGTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: LMLKFKSVVCLHECV*SVCVCVLSCVCVWS Trigger: AGACCACACACACACACATGAAAGCACACAGACACACACAGACCACACACACTCATGCAAGCATACAACTGACTTAAATTTTAACATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR GCA 90 bp | ACTCATAGCTGGGGTGGTGCAGAAGAACAAAGTTCAGAGTCTCTATaGAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATT | + |
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Preference number: 1 (lower is better) Translates to: THSWGGAEEQSSESL*KLDYEESLVSPYII Trigger: AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTCTGAACTTTGTTCTTCTGCACCACCCCAGCTATGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAACCCTGTCTGGCCTCTaGGGGCAGCATGCAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: RESVMGARDEDIGCVLHRTLSGL*GQHADL Trigger: CAAGTCTGCATGCTGCCCTCAGAGGCCAGACAGGGT...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCTGATGACCTGTGCTTaGCCTGTTAGCAGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKLMTCA*PVSRAG Trigger: TCCTGCTCTGCTAACAGGCCAAGCACAGGTCATCAG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGCTGATGACCTGTGCTTaGCCTGTTAGCAGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GARDEDIGCVLHRGNRGWLMTCA*PVSRAG Trigger: TCCTGCTCTGCTAACAGGCCAAGCACAGGTCATCAG...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCTCAGGTTCAGAGGCTaGACACTAAAGGCACTATGG | + |
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Preference number: 2 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKLRFRG*TLKALW Trigger: CCATAGTGCCTTTAGTGTCCAGCCTCTGAACCTGAG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGAGTTGTATGCTTGCATaGGTGTGTGTGGTCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKSCMLA*VCVVCV Trigger: CACACAGACCACACACACTCATGCAAGCATACAACT...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGGCACATGCATGCATGTaGTCCTGTAGGTGGAATGAT | + |
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Preference number: 2 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKAHACM*SCRWND Trigger: ATCATTCCACCTACAGGAGCACATGCATGCATGTGC...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCCTATGAGACAGACTTaGAGGCTGACAAGAGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKPMRQT*RLTRGN Trigger: ATTTCCTCTTGTCAGCCTTCAAGTCTGTCTCATAGG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCACATGCATGCATGTaGTCCTGTAGGTGGAATGAT | + |
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Preference number: 2 (lower is better) Translates to: GARDEDIGCVLHRGNRGWAHACM*SCRWND Trigger: ATCATTCCACCTACAGGAGCACATGCATGCATGTGC...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGCCTATGAGACAGACTTaGAGGCTGACAAGAGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: GARDEDIGCVLHRGNRGWPMRQT*RLTRGN Trigger: ATTTCCTCTTGTCAGCCTTCAAGTCTGTCTCATAGG...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGTTTGTTGCATGAAGTaGCTGCAGAATCCTCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: GARDEDIGCVLHRGNRGWVCCMK*LQNPQV Trigger: AACCTGAGGATTCTGCAGCCACTTCATGCAACAAAC...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGACTATGGGAAGACAATaGCAAAGAATGGGTTACTCC | + |
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Preference number: 2 (lower is better) Translates to: GARDEDIGCVLHRGNRGWTMGRQ*QRMGYS Trigger: GGAGTAACCCATTCTTTGCCATTGTCTTCCCATAGT...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGACCCTGTCAGAACTATaGGAAGACAATGGCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GARDEDIGCVLHRGNRGWTLSEL*EDNGKE Trigger: TTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGT...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGCTCAGGTTCAGAGGCTaGACACTAAAGGCACTATGG | + |
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Preference number: 2 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLLRFRG*TLKALW Trigger: CCATAGTGCCTTTAGTGTCCAGCCTCTGAACCTGAG...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGTTTCAGCACCCAAATaGTGGTTCACAGCCAATACT | + |
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Preference number: 2 (lower is better) Translates to: RESVMGARDEDIGCVLHRVSAPK*WFTANT Trigger: AGTATTGGCTGTGAACCATCATTTGGGTGCTGAAAC...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGGAGACTAAAAGAAGGTaGAAGAGGATTCAAGTATGT | + |
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Preference number: 2 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKETKRR*KRIQVC Trigger: ACATACTTGAATCCTCTTGCACCTTCTTTTAGTCTC...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAATGTGCTCCTGTAGGTaGAATGATCTGATGACCTGT | + |
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Preference number: 2 (lower is better) Translates to: RESVMGARDEDIGCVLHRMCSCR*NDLMTC Trigger: ACAGGTCATCAGATCATTCCACCTACAGGAGCACAT...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCATCCAACACCCTGTCTaGCCTCTGAGGGCAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLIQHPV*PLRAAC Trigger: GCATGCTGCCCTCAGAGGCCAGACAGGGTGTTGGAT...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGAGGATTCAAGTATGTaGTCCACACAAAATACTGAC | + |
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Preference number: 2 (lower is better) Translates to: GARDEDIGCVLHRGNRGWEDSSM*STQNTD Trigger: GTCAGTATTTTGTGTGGACCACATACTTGAATCCTC...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGCACTATGGGAAACTaGAGATCTTATGAAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: RESVMGARDEDIGCVLHRGTMGN*RSYETQ Trigger: TTGGGTTTCATAAGATCTTCAGTTTCCCATAGTGCC...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGAGTTCAGAGTCTCTATaGAAGCTAGATTATGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKSSESL*KLDYEE Trigger: TTCTTCATAATCTAGCTTGCATAGAGACTCTGAACT...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGGTTTGTTGCATGAAGTaGCTGCAGAATCCTCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLVCCMK*LQNPQV Trigger: AACCTGAGGATTCTGCAGCCACTTCATGCAACAAAC...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAATGCAAGCTAGATTATaGAGAATCACTTGTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RESVMGARDEDIGCVLHRMQARL*RITCLS Trigger: GGAGAGACAAGTGATTCTTCATAATCTAGCTTGCAT...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCGTGCTTGCACATGCATaGATGTGCTCCTGTAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLVLAHA*MCSCRW Trigger: CCACCTACAGGAGCACATGCATGCATGTGCAAGCAC...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGATGCAAGCTAGATTATaGAGAATCACTTGTCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLMQARL*RITCLS Trigger: GGAGAGACAAGTGATTCTTCATAATCTAGCTTGCAT...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGCAAATCACATACACCTaGCAGCTCACAAAACAACAA | + |
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Preference number: 2 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLQITYT*QLTKQQ Trigger: TTGTTGTTTTGTGAGCTGGCAGGTGTATGTGATTTG...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAATCCAACACCCTGTCTaGCCTCTGAGGGCAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: FSCLLRDTRAKDSCFLITIQHPV*PLRAAC Trigger: GCATGCTGCCCTCAGAGGCCAGACAGGGTGTTGGAT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGTTTCAGCACCCAAATaGTGGTTCACAGCCAATACT | + |
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Preference number: 2 (lower is better) Translates to: ESLCKLDYEESLVSPYIIVSAPK*WFTANT Trigger: AGTATTGGCTGTGAACCATCATTTGGGTGCTGAAAC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTAGTCAGTTGTATGCTTaGATGAGTGTGTGTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ESLCKLDYEESLVSPYIISQLYA*MSVCGL Trigger: CAGACCACACACACTCATGCAAGCATACAACTGACT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAAGTCAGTTGTATGCTTaGATGAGTGTGTGTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: FSCLLRDTRAKDSCFLITSQLYA*MSVCGL Trigger: CAGACCACACACACTCATGCAAGCATACAACTGACT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTAATATGTTTGTTGCATaGAGTGGCTGCAGAATCCTC | + |
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Preference number: 2 (lower is better) Translates to: ESLCKLDYEESLVSPYIINMFVA*SGCRIL Trigger: GAGGATTCTGCAGCCACTTCATGCAACAAACATATT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGACAGACTTGAAGGCTaGCAAGAGGAAATAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ESLCKLDYEESLVSPYIIDRLEG*QEEIKA Trigger: TGCTTTTATTTCCTCTTGTCAGCCTTCAAGTCTGTC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCATGTGTGTATCATCATaGTCAGCTAGAATTTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLMCVSS*SARILG Trigger: TCCTAAAATTCTAGCTGAGCATGATGATACACACAT...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAACCCTGTCAGAACTATaGGAAGACAATGGCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: FSCLLRDTRAKDSCFLITTLSEL*EDNGKE Trigger: TTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTTTTAAGTCAGTTGTATaGTTGCATGAGTGTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ESLCKLDYEESLVSPYIIFKSVV*LHECVW Trigger: CCACACACACTCATGCAAGCATACAACTGACTTAAA...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACACAAATCACATACACCTaGCAGCTCACAAAACAACAA | + |
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Preference number: 2 (lower is better) Translates to: FSCLLRDTRAKDSCFLITQITYT*QLTKQQ Trigger: TTGTTGTTTTGTGAGCTGGCAGGTGTATGTGATTTG...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGAGGATTCAAGTATGTaGTCCACACAAAATACTGAC | + |
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Preference number: 2 (lower is better) Translates to: ESLCKLDYEESLVSPYIIEDSSM*STQNTD Trigger: GTCAGTATTTTGTGTGGACCACATACTTGAATCCTC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAATAATCAGAAAGGCATaGGATTTCCAGATATGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: FSCLLRDTRAKDSCFLITIIRKA*DFQIWW Trigger: CCACCATATCTGGAAATCCCATGCCTTTCTGATTAT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAGAGACTAAAAGAAGGTaGAAGAGGATTCAAGTATGT | + |
|
Preference number: 2 (lower is better) Translates to: FSCLLRDTRAKDSCFLITETKRR*KRIQVC Trigger: ACATACTTGAATCCTCTTGCACCTTCTTTTAGTCTC...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTACACTAAAGGCACTATaGGAAACTGAAGATCTTATG | + |
|
Preference number: 2 (lower is better) Translates to: ESLCKLDYEESLVSPYIITLKAL*ETEDLM Trigger: CATAAGATCTTCAGTTTCCCATAGTGCCTTTAGTGT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAATGTGTGTATCATCATaGTCAGCTAGAATTTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FSCLLRDTRAKDSCFLITMCVSS*SARILG Trigger: TCCTAAAATTCTAGCTGAGCATGATGATACACACAT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAAGCACTAAGATGATGTaGTATGAAGATAATTTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FSCLLRDTRAKDSCFLITSTKMM*YEDNLS Trigger: GCTCAAATTATCTTCATACCACATCATCTTAGTGCT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR CCA 72 bp | AATACTAATTCCAGTCCCAAGATCCAACACCCTGTCTaGCCTCTGAGGGCAGCATGCAGACTTGTGGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: NTNSSPKIQHPV*PLRAACRLVAH Trigger: GTGTGCCACAAGTCTGCATGCTGCCCTCAGAGGCCAGACAGGGTGTTGGATCTTGGGACTGGAATTAGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGACCTATGAGACAGACTaGAAGGCTGACAAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GARDEDIGCVLHRGNRGWTYETD*KADKRK Trigger: TTTCCTCTTGTCAGCCTTCAAGTCTGTCTCATAGGT...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR CCA 72 bp | TGCTCCTGTAGGTGGAATGATCTGATGACCTGTGCTTaGCCTGTTAGCAGAGCAGGAAGATTCAAGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: CSCRWNDLMTCA*PVSRAGRFKSD Trigger: GTCACTCTTGAATCTTCCTGCTCTGCTAACAGGCCAAGCACAGGTCATCAGATCATTCCACCTACAGGAGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR TCA 72 bp | AAATCTAGAAAGGGAGAGTGTCATGGGAGCAAGGGATaGAGACATAGGATGTGTCCTTCACAGAGGGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: KSRKGECHGSKG*RHRMCPSQREQ Trigger: CTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCTTTCTAGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR TCA 72 bp | GAAGATAATTTGAGCCAGTGGAATATGTTTGTTGCATaGAGTGGCTGCAGAATCCTCAGGTTCAGAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EDNLSQWNMFVA*SGCRILRFRGW Trigger: CCAGCCTCTGAACCTGAGGATTCTGCAGCCACTTCATGCAACAAACATATTCCACTGGCTCAAATTATCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR CCA 72 bp | ATCCTCAGGTTCAGAGGCTGGACACTAAAGGCACTATaGGAAACTGAAGATCTTATGAAACCCAAAGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: ILRFRGWTLKAL*ETEDLMKPKEI Trigger: GATCTCTTTGGGTTTCATAAGATCTTCAGTTTCCCATAGTGCCTTTAGTGTCCAGCCTCTGAACCTGAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR GCA 72 bp | TGGGGTGGTGCAGAAGAACAAAGTTCAGAGTCTCTATaGAAGCTAGATTATGAAGAATCACTTGTCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WGGAEEQSSESL*KLDYEESLVSP Trigger: AGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTCTGAACTTTGTTCTTCTGCACCACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR CCA 72 bp | AACACTGAACAATGTCTTTTCTGCCTAAAAGAGGAATaGGGTCAGTTCAAATCACATACACCTGCCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NTEQCLFCLKEE*GQFKSHTPASS Trigger: TGAGCTGGCAGGTGTATGTGATTTGAACTGACCCCATTCCTCTTTTAGGCAGAAAAGACATTGTTCAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR CCA 72 bp | AAATTTAAGTCAGTTGTATGCTTGCATGAGTGTGTGTaGTCTGTGTGTGTCTGTGTGCTTTCATGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KFKSVVCLHECV*SVCVCVLSCVC Trigger: ACACACACATGAAAGCACACAGACACACACAGACCACACACACTCATGCAAGCATACAACTGACTTAAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR CCA 72 bp | GCTTACCGAGTAAATCAGAAAGAATATACTCATAGCTaGGGTGGTGCAGAAGAACAAAGTTCAGAGTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: AYRVNQKEYTHS*GGAEEQSSESL Trigger: TAGAGACTCTGAACTTTGTTCTTCTGCACCACCCCAGCTATGAGTATATTCTTTCTGATTTACTCGGTAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR CCA 72 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATaGCAAAGAATGGGTTACTCCATGAATTCATTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FKSDPVRTMGRQ*QRMGYSMNSFY Trigger: ATAGAATGAATTCATGGAGTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAACCTATGAGACAGACTaGAAGGCTGACAAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSCLLRDTRAKDSCFLITTYETD*KADKRK Trigger: TTTCCTCTTGTCAGCCTTCAAGTCTGTCTCATAGGT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| 3UTR TCA 72 bp | TTAACCTTGACTCTCCCACATCATTATCCTAAATGTTaGAGTACATGTGTGTATCATCATGCTCAGCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LTLTLPHHYPKC*STCVYHHAQLE Trigger: TTCTAGCTGAGCATGATGATACACACATGTACTTCAACATTTAGGATAATGATGTGGGAGAGTCAAGGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGGGCAGGCAGGGTaGGAAGCAACTCCTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GARDEDIGCVLHRGNRGWAGQAG*EATPVL Trigger: CAGAACAGGAGTTGCTTCTCACCCTGCCTGCCCTGC...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGCTCCTTCTTCCCAGTTaGCCAAGCTTCCGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRLLLPS*PSFRHR Trigger: CCTGTGGCGGAAGCTTGGGCAACTGGGAAGAAGGAG...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCTCTTCAGGAAGGACTaGGAGCACATCCGGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKLFRKD*EHIRFA Trigger: GGCAAACCGGATGTGCTCTCAGTCCTTCCTGAAGAG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTCGTCCAAGATGTCGTaGAAGGCGAGAACTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRSSKMS*KARTRR Trigger: CCTCCGAGTTCTCGCCTTTCACGACATCTTGGACGA...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGGTAAAACCCAGCAGCTaGCATCTCCTGTGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKVKPSS*HLLWRP Trigger: TGGACGCCACAGGAGATGGCAGCTGCTGGGTTTTAC...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGGCCCCTTGCACAGGCTaGCTGACGTGCTTTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKAPCTG*LTCFEM Trigger: CATTTCAAAGCACGTCAGCCAGCCTGTGCAAGGGGC...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGGCCCCTTGCACAGGCTaGCTGACGTGCTTTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRAPCTG*LTCFEM Trigger: CATTTCAAAGCACGTCAGCCAGCCTGTGCAAGGGGC...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGCCTGCCCCTAGGAGTTaGGTACAGATGATGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRPAPRS*VQMMLA Trigger: GGCCAACATCATCTGTACCCAACTCCTAGGGGCAGG...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGGAGGACACAGTGGCCTaGAGAGACTCAGCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHREDTVA*RDSAVA Trigger: AGCTACAGCTGAGTCTCTCCAGGCCACTGTGTCCTC...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTGGGTCGTCACCTTCTaGCCACTTCTCCAAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRWVVTF*PLLQTS Trigger: GGATGTTTGGAGAAGTGGGCAGAAGGTGACGACCCA...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCTTGGGGATCTTGCATaGCTTGGGGGACAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKLGDLA*LGGQIP Trigger: TGGAATCTGTCCCCCAAGCCATGCAAGATCCCCAAG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTTCAAAACCCACAGGTaGTTCTTGGGGCCAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRFKTHR*FLGPVL Trigger: AAGGACTGGCCCCAAGAATCACCTGTGGGTTTTGAA...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGACCTGGTGTTGTAACTaGTGGATGCTGCTGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKTWCCN*WMLLLR Trigger: TCTGAGCAGCAGCATCCAGCAGTTACAACACCAGGT...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGCGGAGGCACGGAAGCTaGAGACACTGCCGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLRRHGS*RHCRTI Trigger: GATTGTCCGGCAGTGTCTGCAGCTTCCGTGCCTCCG...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGACTTCCATGAGGACCTaGAGCAGTGCTTGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GARDEDIGCVLHRGNRGWTSMRT*SSAWSA Trigger: AGCAGACCAAGCACTGCTCCAGGTCCTCATGGAAGT...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGGAATCCCATCCCCAGTaGGAACAAGCAGTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKESHPQ*EQAVPL Trigger: TAGAGGAACTGCTTGTTCCCACTGGGGATGGGATTC...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGCCCATGTTGTTCACTTaGACTTCCAGCTTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GARDEDIGCVLHRGNRGWPMLFT*TSSLGI Trigger: GATCCCCAAGCTGGAAGTTCAAGTGAACAACATGGG...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGACTCCTGTGGCGTCCATaGTCTGAACGTGTCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RESVMGARDEDIGCVLHRLLWRP*SERVIG Trigger: TCCTATGACACGTTCAGATCATGGACGCCACAGGAG...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCCAACATCTTTTCCCTaGAGGAACTCACATTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKPTSFP*RNSHSG Trigger: ACCAGAATGTGAGTTCCTTCAGGGAAAAGATGTTGG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGAGAAAAAGCCTGCTCTaGCTAGAGCTTCAAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRRKSLL*LELQNP Trigger: TGGGTTTTGAAGCTCTAGTCAGAGCAGGCTTTTTCT...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGAGTTGGGTACAGATaGTGTTGGCCAGTCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RESVMGARDEDIGCVLHRGVGYR*CWPVPD Trigger: ATCAGGGACTGGCCAACATCATCTGTACCCAACTCC...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGGATAACTTCTCCATGTaGTGGAGGTTCAGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRDNFSM*WRFRNS Trigger: AGAGTTCCTGAACCTCCATCACATGGAGAAGTTATC...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAAGTGACCCAAAGCCTTaGCAGTGGTGGCCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RESVMGARDEDIGCVLHRSDPKP*QWWPEL Trigger: AAGTTCAGGCCACCACTGTCAAGGCTTTGGGTCACT...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGATGGGTCGTCACCTTCTaGCCACTTCTCCAAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: RESVMGARDEDIGCVLHRWVVTF*PLLQTS Trigger: GGATGTTTGGAGAAGTGGGCAGAAGGTGACGACCCA...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCATCGTCAGGGCCCCTTaGACAGGCTGGCTGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSAIVRAP*TGWLTC Trigger: GCACGTCAGCCAGCCTGTGCAAGGGGCCCTGACGAT...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGATCAACTCCTGCCTCTaGCAGGTCATCACTATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRINSCL*QVITIE Trigger: TTCAATAGTGATGACCTGGCAGAGGCAGGAGTTGAT...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGCACATGAGGACACAGTaGCCTGGAGAGACTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLHMRTQ*PGETQL Trigger: CAGCTGAGTCTCTCCAGGCCACTGTGTCCTCATGTG...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGTGTCTGGTAGGGCTCTaGGCCAGATATTTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKCLVGL*ARYFHS Trigger: ACTATGAAAATATCTGGCCCAGAGCCCTACCAGACA...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTGTCTGGTAGGGCTCTaGGCCAGATATTTTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRCLVGL*ARYFHS Trigger: ACTATGAAAATATCTGGCCCAGAGCCCTACCAGACA...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGGGAAGCCACTGCTGTTaGATAAATGGAACTCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKGSHCC*INGTQY Trigger: GTATTGAGTTCCATTTATTCAACAGCAGTGGCTTCC...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGAAGCAAGCGCAGTCATaGGAGACTCACAATTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IGCVLHRGNRGWAETIHRKQAQS*ETHNLK Trigger: TTTCAAATTGTGAGTCTCTCATGACTGCGCTTGCTT...CCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGGAGCAGTGCTTGGTCTaGTGGACCCATGTTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLEQCLV*WTHVVH Trigger: GTGAACAACATGGGTCCAGCAGACCAAGCACTGCTC...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGAAGCAACTCCTGTTCTaGTCTGCTGAGCTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLKQLLF*SAELQP Trigger: AGGCTGGAGCTCAGCAGAGCAGAACAGGAGTTGCTT...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGTCTGGCAAGTTCATGTaGCAGAAACTGGTTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKSGKFM*QKLVLV Trigger: CACTAAAACCAGTTTCTGCCACATGAACTTGCCAGA...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGCTTGGGGATCTTGCATaGCTTGGGGGACAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLLGDLA*LGGQIP Trigger: TGGAATCTGTCCCCCAAGCCATGCAAGATCCCCAAG...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGTGGGCAGATGCATTTTaGTTCCAGTCATTACATACT | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKWADAF*FQSLHT Trigger: AGTATGTAATGACTGGAATCAAAATGCATCTGCCCA...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGGCTGGAGCACACTTCTaGCAAGTTCATGTGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLAGAHF*QVHVAE Trigger: TTCTGCCACATGAACTTGCCAGAAGTGTGCTCCAGC...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACATTGGAGAAGACCTCTaGGATCGTCAGGGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYIGEDL*DRQGPL Trigger: CAAGGGGCCCTGACGATCCCAGAGGTCTTCTCCAAT...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGTCCACCACTGTAGAATaGACTGCTGCTGCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLSTTVE*TAAASS Trigger: TGATGATGCAGCAGCAGTTCATTCTACAGTGGTGGA...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGCTCTTCATGGTACCTTaGTTTGCCACCTCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLLFMVP*FATSQH Trigger: ATGCTGAGAGGTGGCAAAGCAAGGTACCATGAAGAG...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR GCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGGTTGTAACTGCTGGATaGTGCTGCTCAGACACACTT | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLVVTAG*CCSDTL Trigger: AAGTGTGTCTGAGCAGCAGCATCCAGCAGTTACAAC...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCGAGGACCTGGAGCAGTaGTTGGTCTGCTGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLEDLEQ*LVCWTH Trigger: ATGGGTCCAGCAGACCAAGCACTGCTCCAGGTCCTC...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCCTCCTGTGGCGTCCATaGTCTGAACGTGTCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSALLWRP*SERVIG Trigger: TCCTATGACACGTTCAGATCATGGACGCCACAGGAG...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR TCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGTATTGCCTTCAGAGGTaGGTCAATTTGTCTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GARDEDIGCVLHRGNRGWYCLQR*VNLSQI Trigger: TATTTGAGACAAATTGACTCACCTCTGAAGGCAATA...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGACCCGGATGTCATACTTaGCAATGTTACCAACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RESVMGARDEDIGCVLHRPGCHT*QCYQHL Trigger: AAGATGTTGGTAACATTGGCAAGTATGACATCCGGG...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR GCA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGACAATGTCCTTTTTaGCAGTGTAGAAAAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RESVMGARDEDIGCVLHRGQCPF*QCRKSL Trigger: CAGGCTTTTTCTACACTGGCAAAAAGGACATTGTCC...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACCGTGGCTTCTGGAAGTaGATATTGGCTCTGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYRGFWK*ILALKG Trigger: ACCCTTCAGAGCCAATATGCACTTCCAGAAGCCACG...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTATCGTCAGGGCCCCTTaGACAGGCTGGCTGACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKYMCVSSCSARILGVLGIVRAP*TGWLTC Trigger: GCACGTCAGCCAGCCTGTGCAAGGGGCCCTGACGAT...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR GCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGGTCATTACATACTGCTaGTACGAAGAGAGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLVITYC*YEERGL Trigger: AAGACCCCTCTCTTCGTAGCAGCAGTATGTAATGAC...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR GCA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGCTTCCTCGAAGGAATTaGAAAATAAATGGAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GARDEDIGCVLHRGNRGWLPRRN*KINGEH Trigger: ATGCTCTCCATTTATTTTGCAATTCCTTCGAGGAAG...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR GCA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACTGGCCTGAACTTGAATaGGTCCTGGGATATTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYWPELE*VLGYSC Trigger: GCAGGAATATCCCAGGACGCATTCAAGTTCAGGCCA...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR CCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCCTGGCCTCCTCTTCATaGTACCTTGCTTTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSALASSS*YLALPP Trigger: AGGTGGCAAAGCAAGGTACCATGAAGAGGAGGCCAG...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR CCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCGAGGACACAGTGGCCTaGAGAGACTCAGCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLEDTVA*RDSAVA Trigger: AGCTACAGCTGAGTCTCTCCAGGCCACTGTGTCCTC...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR CCA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCTGCTGTTGAATAAATaGAACTCAATACTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKLLLNK*NSILCE Trigger: TTCACAGAGTATTGAGTTCCATTTATTCAACAGCAG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR TCA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTGCAGGGCAGGCAGGGTaGGAAGCAACTCCTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYMCVSSCSARILGVLGAGQAG*EATPVL Trigger: CAGAACAGGAGTTGCTTCTCACCCTGCCTGCCCTGC...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR TCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGTGACCCAAAGCCTTaGCAGTGGTGGCCTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLSDPKP*QWWPEL Trigger: AAGTTCAGGCCACCACTGTCAAGGCTTTGGGTCACT...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTCGGAGGCACGGAAGCTaGAGACACTGCCGGACAATC | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIRRHGS*RHCRTI Trigger: GATTGTCCGGCAGTGTCTGCAGCTTCCGTGCCTCCG...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCTGGCCTGAACTTGAATaGGTCCTGGGATATTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSAWPELE*VLGYSC Trigger: GCAGGAATATCCCAGGACGCATTCAAGTTCAGGCCA...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCACTTCCATGAGGACCTaGAGCAGTGCTTGGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLTSMRT*SSAWSA Trigger: AGCAGACCAAGCACTGCTCCAGGTCCTCATGGAAGT...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGCTGGGCAAACTTTTCTaGTGTTTCCTTATCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLLGKLF*CFLICK Trigger: TTTGCAGATAAGGAAACATCAGAAAAGTTTGCCCAG...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACACTCCTTCTTCCCAGTTaGCCAAGCTTCCGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITLLLPS*PSFRHR Trigger: CCTGTGGCGGAAGCTTGGGCAACTGGGAAGAAGGAG...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCCGTGGCTTCTGGAAGTaGATATTGGCTCTGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLRGFWK*ILALKG Trigger: ACCCTTCAGAGCCAATATGCACTTCCAGAAGCCACG...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCGTTGTAACTGCTGGATaGTGCTGCTCAGACACACTT | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSAVVTAG*CCSDTL Trigger: AAGTGTGTCTGAGCAGCAGCATCCAGCAGTTACAAC...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTGAGGACCTGGAGCAGTaGTTGGTCTGCTGGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKYMCVSSCSARILGVLGEDLEQ*LVCWTH Trigger: ATGGGTCCAGCAGACCAAGCACTGCTCCAGGTCCTC...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTCTCTTCAGGAAGGACTaGGAGCACATCCGGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIILFRKD*EHIRFA Trigger: GGCAAACCGGATGTGCTCTCAGTCCTTCCTGAAGAG...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCGATAACTTCTCCATGTaGTGGAGGTTCAGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSADNFSM*WRFRNS Trigger: AGAGTTCCTGAACCTCCATCACATGGAGAAGTTATC...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAGTTCCTCTAAGTTCCTaGGAGAACCCAGAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITVPLSS*ENPEPG Trigger: CCCAGGCTCTGGGTTCTCTCAGGAACTTAGAGGAAC...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGTTCCTCTAAGTTCCTaGGAGAACCCAGAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIVPLSS*ENPEPG Trigger: CCCAGGCTCTGGGTTCTCTCAGGAACTTAGAGGAAC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTTCGTCCAAGATGTCGTaGAAGGCGAGAACTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIISSKMS*KARTRR Trigger: CCTCCGAGTTCTCGCCTTTCACGACATCTTGGACGA...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAAGTCGGGACACACAGTaGCCCAAAGCCTTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITSRDTQ*PKALTV Trigger: CACTGTCAAGGCTTTGGGTCACTGTGTGTCCCGACT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTAGTCGGGACACACAGTaGCCCAAAGCCTTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYMCVSSCSARILGVLGSRDTQ*PKALTV Trigger: CACTGTCAAGGCTTTGGGTCACTGTGTGTCCCGACT...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGTAAAACCCAGCAGCTaGCATCTCCTGTGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIVKPSS*HLLWRP Trigger: TGGACGCCACAGGAGATGGCAGCTGCTGGGTTTTAC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCCATGGTACCTTGCTTTaGCACCTCTCAGCATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLHGTLL*HLSASS Trigger: AGAAGATGCTGAGAGGTGGCAAAGCAAGGTACCATG...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCCTCTTCATGGTACCTTaGTTTGCCACCTCTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLLFMVP*FATSQH Trigger: ATGCTGAGAGGTGGCAAAGCAAGGTACCATGAAGAG...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGGGAACCACTTGGCATaGTCCTTCCAGGGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIGNHLA*SFQGSS Trigger: AGATGACCCCTGGAAGGAGCATGCCAAGTGGTTCCC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTGGGAACCACTTGGCATaGTCCTTCCAGGGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYMCVSSCSARILGVLGGNHLA*SFQGSS Trigger: AGATGACCCCTGGAAGGAGCATGCCAAGTGGTTCCC...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAATTGGAGAAGACCTCTaGGATCGTCAGGGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITIGEDL*DRQGPL Trigger: CAAGGGGCCCTGACGATCCCAGAGGTCTTCTCCAAT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTCCTGCCCCTAGGAGTTaGGTACAGATGATGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIPAPRS*VQMMLA Trigger: GGCCAACATCATCTGTACCCAACTCCTAGGGGCAGG...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACACACATGAGGACACAGTaGCCTGGAGAGACTCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITHMRTQ*PGETQL Trigger: CAGCTGAGTCTCTCCAGGCCACTGTGTCCTCATGTG...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCCCAACATCTTTTCCCTaGAGGAACTCACATTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLPTSFP*RNSHSG Trigger: ACCAGAATGTGAGTTCCTTCAGGGAAAAGATGTTGG...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGGAGTTGGGTACAGATaGTGTTGGCCAGTCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIGVGYR*CWPVPD Trigger: ATCAGGGACTGGCCAACATCATCTGTACCCAACTCC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCAAGCAAGCGCAGTCATaGGAGACTCACAATTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSAKQAQS*ETHNLK Trigger: TTTCAAATTGTGAGTCTCTCATGACTGCGCTTGCTT...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCCCCGGATGTCATACTTaGCAATGTTACCAACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSAPGCHT*QCYQHL Trigger: AAGATGTTGGTAACATTGGCAAGTATGACATCCGGG...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGATCTTGGTCTTCCTaGCTATCTGAACTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLRSWSS*LSELRS Trigger: ACTCCTGAGTTCAGATAGGCAGGAAGACCAAGATCT...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTGAGCAGTGCTTGGTCTaGTGGACCCATGTTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKYMCVSSCSARILGVLGEQCLV*WTHVVH Trigger: GTGAACAACATGGGTCCAGCAGACCAAGCACTGCTC...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTAAGCAACTCCTGTTCTaGTCTGCTGAGCTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIKQLLF*SAELQP Trigger: AGGCTGGAGCTCAGCAGAGCAGAACAGGAGTTGCTT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACACTGGCCTCCTCTTCATaGTACCTTGCTTTGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITLASSS*YLALPP Trigger: AGGTGGCAAAGCAAGGTACCATGAAGAGGAGGCCAG...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCTCTGGCAAGTTCATGTaGCAGAAACTGGTTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSASGKFM*QKLVLV Trigger: CACTAAAACCAGTTTCTGCCACATGAACTTGCCAGA...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCTGGGCAGATGCATTTTaGTTCCAGTCATTACATACT | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSAWADAF*FQSLHT Trigger: AGTATGTAATGACTGGAATCAAAATGCATCTGCCCA...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAAAAGTGTCACATCTTaGAAGTCATCCTGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLKSVTS*KSSWAD Trigger: ATCTGCCCAGGATGACTTTCAAGATGTGACACTTTT...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTCCCATGTTGTTCACTTaGACTTCCAGCTTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LKYMCVSSCSARILGVLGPMLFT*TSSLGI Trigger: GATCCCCAAGCTGGAAGTTCAAGTGAACAACATGGG...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCGGACAATGTCCTTTTTaGCAGTGTAGAAAAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLGQCPF*QCRKSL Trigger: CAGGCTTTTTCTACACTGGCAAAAAGGACATTGTCC...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTACCTGGTGTTGTAACTaGTGGATGCTGCTGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIITWCCN*WMLLLR Trigger: TCTGAGCAGCAGCATCCAGCAGTTACAACACCAGGT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACCTTCCTCGAAGGAATTaGAAAATAAATGGAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYLPRRN*KINGEH Trigger: ATGCTCTCCATTTATTTTGCAATTCCTTCGAGGAAG...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCGCAGCAAGAAACTCCTaGAACAGAGGACCTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLAARNS*NRGPKN Trigger: ATTTTTAGGTCCTCTGTTCCAGGAGTTTCTTGCTGC...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGAATCCCATCCCCAGTaGGAACAAGCAGTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIESHPQ*EQAVPL Trigger: TAGAGGAACTGCTTGTTCCCACTGGGGATGGGATTC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTTCCACCACTGTAGAATaGACTGCTGCTGCATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIISTTVE*TAAASS Trigger: TGATGATGCAGCAGCAGTTCATTCTACAGTGGTGGA...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCTATTGCCTTCAGAGGTaGGTCAATTTGTCTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RIQVCGPHKILTLKRCSAYCLQR*VNLSQI Trigger: TATTTGAGACAAATTGACTCACCTCTGAAGGCAATA...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAAGAAAAAGCCTGCTCTaGCTAGAGCTTCAAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITRKSLL*LELQNP Trigger: TGGGTTTTGAAGCTCTAGTCAGAGCAGGCTTTTTCT...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTATCAACTCCTGCCTCTaGCAGGTCATCACTATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIINSCL*QVITIE Trigger: TTCAATAGTGATGACCTGGCAGAGGCAGGAGTTGAT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTAGATCTTGGTCTTCCTaGCTATCTGAACTCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIRSWSS*LSELRS Trigger: ACTCCTGAGTTCAGATAGGCAGGAAGACCAAGATCT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAGGAAGCCACTGCTGTTaGATAAATGGAACTCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITGSHCC*INGTQY Trigger: GTATTGAGTTCCATTTATTCAACAGCAGTGGCTTCC...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGCAGCAAGAAACTCCTaGAACAGAGGACCTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ESLCKLDYEESLVSPYIIAARNS*NRGPKN Trigger: ATTTTTAGGTCCTCTGTTCCAGGAGTTTCTTGCTGC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACACTGGGCAAACTTTTCTaGTGTTTCCTTATCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITLGKLF*CFLICK Trigger: TTTGCAGATAAGGAAACATCAGAAAAGTTTGCCCAG...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTCTCCATTCACTTACATaGTCAAAGGCAGATGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LKYMCVSSCSARILGVLGLHSLT*SKADVY Trigger: GTATACATCTGCCTTTGAGCATGTAAGTGAATGGAG...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACACTGCTGTTGAATAAATaGAACTCAATACTCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSCLLRDTRAKDSCFLITLLLNK*NSILCE Trigger: TTCACAGAGTATTGAGTTCCATTTATTCAACAGCAG...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCTGTTGGCGCTGCCTTaGAGGAAGAGTGGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKLLALP*RKSGWR Trigger: TCTCCAGCCACTCTTCCTCAAAGGCAGCGCCAACAG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGTCCAGCTTGGGGATCTaGCATGGCTTGGGGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GARDEDIGCVLHRGNRGWSSLGI*HGLGDR Trigger: TCTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGA...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGGACCTGGAGCAGTGCTaGGTCTGCTGGACCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GARDEDIGCVLHRGNRGWDLEQC*VCWTHV Trigger: AACATGGGTCCAGCAGACCAAGCACTGCTCCAGGTC...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS CCA 90 bp | GTGCTTGGTCTGCTGGACCCATGTTGTTCACTTGAACTTCCAGCTTaGGGATCTTGCATGGCTTGGGGGACAGATTCCAGTACCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLGLLDPCCSLELPA*GSCMAWGTDSSTLH Trigger: GTGAAGGGTACTGGAATCTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGAAGTTCAAGTGAACAACATGGGTCCAGCAGACCAAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGAGTGGTGGCCTGAACTaGAATGCGTCCTGGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKSGGLN*NASWDI Trigger: AATATCCCAGGACGCATTCAAGTTCAGGCCACCACT...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGATGGTCTTCTTCTTCTaGGCTCTTTGCCAGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKMVFFF*ALCQLN Trigger: GTTCAGCTGGCAAAGAGCCAAGAAGAAGAAGACCAT...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCTTCTTCTTGGCTCTTaGCCAGCTGAACTAGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKLLLGS*PAELDS Trigger: TGAATCTAGTTCAGCTGGCAAAGAGCCAAGAAGAAG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS TCA 90 bp | TGTGGTAAAACCCAGCAGCTGCCATCTCCTGTGGCGTCCATGATCTaGACGTGTCATAGGACTCAAAGGTCTTTAGTCGTTTGGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CGKTQQLPSPVASMI*TCHRTQRSLVVWLH Trigger: GTGAAGCCAAACGACTAAAGACCTTTGAGTCCTATGACACGTTCAGATCATGGACGCCACAGGAGATGGCAGCTGCTGGGTTTTACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GATGTGTCCTTCACAGAGGGAACAGAGGGTGGGCAGAGACCATCCACAGGTAAGCATGGCTTCAAAGCATaGTCCAGAAAACTCAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: DVSFTEGTEGGQRPSTGKHGFKA*SRKLNL Trigger: GAGATTGAGTTTTCTGGACAATGCTTTGAAGCCATG...CTTACCTGTGGATGGTCTCTGCCCACCCTCTGTTCCCTCTGTGAAGGACACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS TCA 90 bp | GAGAGGTCAGACTCTGTAGAGGTTCTGATGGATAACTTCTCCATGTaGTGGAGGTTCAGGAACTCTTCAGGAAGGACTGAGAGCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: ERSDSVEVLMDNFSM*WRFRNSSGRTESTS Trigger: GGATGTGCTCTCAGTCCTTCCTGAAGAGTTCCTGAACCTCCATCACATGGAGAAGTTATCCATCAGAACCTCTACAGAGTCTGACCTCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS CCA 90 bp | CTCCTCTTCATGGTACCTTGCTTTGCCACCTCTCAGCATCTTCTCTaGACTCTTCACCCGGATGTCATACTTGCCAATGTTACCAACATC | + |
|
Preference number: 5 (lower is better) Translates to: LLFMVPCFATSQHLL*TLHPDVILANVTNI Trigger: GATGTTGGTAACATTGGCAAGTATGACATCCGGGTGAAGAGTCCAGAGAAGATGCTGAGAGGTGGCAAAGCAAGGTACCATGAAGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGAGAGGACTTCAAGGTTaGAAGAAATACACATTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GARDEDIGCVLHRGNRGWRGLQG*KKYTFG Trigger: CCCGAATGTGTATTTCTTCAAACCTTGAAGTCCTCT...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGCCAGGTCATCACTATaGAACTCAAAGCACGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: RESVMGARDEDIGCVLHRARSSL*NSKHDE Trigger: CTCATCGTGCTTTGAGTTCAATAGTGATGACCTGGC...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACGGGATCTTGCATGGCTaGGGGGACAGATTCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYGILHG*GDRFQY Trigger: GTACTGGAATCTGTCCCCCAAGCCATGCAAGATCCC...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGACTTCTTCTTGGCTCTTaGCCAGCTGAACTAGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: RESVMGARDEDIGCVLHRLLLGS*PAELDS Trigger: TGAATCTAGTTCAGCTGGCAAAGAGCCAAGAAGAAG...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGATCGTCAGGGCCCCTaGCACAGGCTGGCTGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: ESLCKLDYEESLVSPYIIDRQGP*HRLADV Trigger: CACGTCAGCCAGCCTGTGCAAGGGGCCCTGACGATC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTGATCGTCAGGGCCCCTaGCACAGGCTGGCTGACGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKYMCVSSCSARILGVLGDRQGP*HRLADV Trigger: CACGTCAGCCAGCCTGTGCAAGGGGCCCTGACGATC...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGAGGGAACAGAGGGTGGTATGATCTCCTCATCTaGAGCAAAATTTCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GARDEDIGCVLHRGNRGWYDLLI*SKISPP Trigger: TGGAGGAGAAATTTTGCTCAAGATGAGGAGATCATA...CCACCCTCTGTTCCCTCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS GCA 90 bp | CACCTCTCAGCATCTTCTCTGGACTCTTCACCCGGATGTCATACTTaGCAATGTTACCAACATCTTTTCCCTGAAGGAACTCACATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLSASSLDSSPGCHT*QCYQHLFPEGTHIL Trigger: CAGAATGTGAGTTCCTTCAGGGAAAAGATGTTGGTAACATTGGCAAGTATGACATCCGGGTGAAGAGTCCAGAGAAGATGCTGAGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGTTCTGGAAGTGCATATaGGCTCTGAAGGGTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLFWKCI*ALKGWN Trigger: ATTCCAACCCTTCAGAGCCAATATGCACTTCCAGAA...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAGTGTCATGGGAGCAAGGGATGAAGACATAGGATGTGTCCTTCACAGACTGGGCAGATGCATTTaGATTCCAGTCATTACATAC | + |
|
Preference number: 5 (lower is better) Translates to: RESVMGARDEDIGCVLHRLGRCI*IPVITY Trigger: GTATGTAATGACTGGAATCAAAATGCATCTGCCCAG...TCTGTGAAGGACACATCCTATGTCTTCATCCCTTGCTCCCATGACACTCTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCGGGATCTTGCATGGCTaGGGGGACAGATTCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLGILHG*GDRFQY Trigger: GTACTGGAATCTGTCCCCCAAGCCATGCAAGATCCC...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACAGTGGTGGCCTGAACTaGAATGCGTCCTGGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYSGGLN*NASWDI Trigger: AATATCCCAGGACGCATTCAAGTTCAGGCCACCACT...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS TCA 90 bp | TTCATCCGTTCTTTATGGTCTTCTTCTTCTTGGCTCTTTGCCAGCTaGACTAGATTCATCCCGAAACGAGCAGAGAGCTCAGCGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FIRSLWSSSSWLFAS*TRFIPKRAESSARN Trigger: ATTTCTCGCTGAGCTCTCTGCTCGTTTCGGGATGAATCTAGTTCAGCTGGCAAAGAGCCAAGAAGAAGAAGACCATAAAGAACGGATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | AGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAGCCATGACAGAGCTGAGATaGGAGAAGACCTCTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RIQVCGPHKILTLKRCSAMTELR*EKTSGI Trigger: GATCCCAGAGGTCTTCTCCAATCTCAGCTCTGTCAT...GGCTGAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGCTGGGCAGATGCATTTaGATTCCAGTCATTACATAC | + |
|
Preference number: 5 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLLGRCI*IPVITY Trigger: GTATGTAATGACTGGAATCAAAATGCATCTGCCCAG...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACGCCAGGTCATCACTATaGAACTCAAAGCACGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYARSSL*NSKHDE Trigger: CTCATCGTGCTTTGAGTTCAATAGTGATGACCTGGC...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS TCA 90 bp | CACATTCTGGTCGTAATTTCTTGTGTCTCTCTATGGGAAGCTTCCTaGGGCTGTTACCAAAGAGGATCAAGCTACAGCAAAAGCACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HILVVISCVSLWEAS*GCYQRGSSYSKSTE Trigger: TTCAGTGCTTTTGCTGTAGCTTGATCCTCTTTGGTAACAGCCTCAGGAAGCTTCCCATAGAGAGACACAAGAAATTACGACCAGAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS CCA 90 bp | GAGAACGGGACTATCCATTTCCAGAAGATAGTCAAGCGTTTGGACTaGGGGTGTCTTTCCTTCACATCATTAATCACTTTCATGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ENGTIHFQKIVKRLD*GCLSFTSLITFMSS Trigger: AGAGGACATGAAAGTGATTAATGATGTGAAGGAAAGACACCCCCAGTCCAAACGCTTGACTATCTTCTGGAAATGGATAGTCCCGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTCTGTTGGCGCTGCCTTaGAGGAAGAGTGGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESLCKLDYEESLVSPYIILLALP*RKSGWR Trigger: TCTCCAGCCACTCTTCCTCAAAGGCAGCGCCAACAG...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR CAA 90 bp | GTCAGGGTTCCCTGCATAGACCCCTGTGCTCAGAAATATCCTATTTTCCATCTGTCTTCCTCGAAGGAATaGCAAAATAAATGGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRVPCIDPCAQKYPIFHLSSSKE*QNKWRA Trigger: TGCTCTCCATTTATTTTGCAATTCCTTCGAGGAAGA...CAGATGGAAAATAGGATATTTCTGAGCACAGGGGTCTATGCAGGGAACCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR CAA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTTCCAGCTTGGGGATCTaGCATGGCTTGGGGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LKYMCVSSCSARILGVLGSSLGI*HGLGDR Trigger: TCTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGA...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS-3UTR CAA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTGACCTGGAGCAGTGCTaGGTCTGCTGGACCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESLCKLDYEESLVSPYIIDLEQC*VCWTHV Trigger: AACATGGGTCCAGCAGACCAAGCACTGCTCCAGGTC...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS GCA 90 bp | GTAGGAATGGAAAAGTGTCACATCTTGAAAGTCATCCTGGGCAGATaGATTTTGATTCCAGTCATTACATACTGCTGCTACGAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGMEKCHILKVILGR*ILIPVITYCCYEER Trigger: CCTCTCTTCGTAGCAGCAGTATGTAATGACTGGAATCAAAATGCATCTGCCCAGGATGACTTTCAAGATGTGACACTTTTCCATTCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACAGAGGACTTCAAGGTTaGAAGAAATACACATTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYRGLQG*KKYTFG Trigger: CCCGAATGTGTATTTCTTCAAACCTTGAAGTCCTCT...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTATGACAGAGCTGAGATaGGAGAAGACCTCTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ESLCKLDYEESLVSPYIIMTELR*EKTSGI Trigger: GATCCCAGAGGTCTTCTCCAATCTCAGCTCTGTCAT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAGTGACCCTGTCAGAACTATGGGAAGACAATGGCAAAGAATGGGTTACAAATTTGGCAAAATGTaGACAAAGGTCATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FKSDPVRTMGRQWQRMGYKFGKM*TKVMAS Trigger: TGAAGCCATGACCTTTGTCAACATTTTGCCAAATTT...GTAACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACTCTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCTCTATGCAAGCTAGATTATGAAGAATCACTTGTCTCTCCTTACATTATTATGGTCTTCTTCTTCTaGGCTCTTTGCCAGCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ESLCKLDYEESLVSPYIIMVFFF*ALCQLN Trigger: GTTCAGCTGGCAAAGAGCCAAGAAGAAGAAGACCAT...AATAATGTAAGGAGAGACAAGTGATTCTTCATAATCTAGCTTGCATAGAGACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCTCTTCCTCGAAGGAATaGCAAAATAAATGGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLSSSKE*QNKWRA Trigger: TGCTCTCCATTTATTTTGCAATTCCTTCGAGGAAGA...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACATCTGGTCGTAATTTCTaGTGTCTCTCTATGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSCLLRDTRAKDSCFLITSGRNF*CLSMGS Trigger: GCTTCCCATAGAGAGACACAAGAAATTACGACCAGA...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTACATGTGTGTATCATCATGCTCAGCTAGAATTTTAGGAGTTTTAGGTTTCTGGAAGTGCATATaGGCTCTGAAGGGTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LKYMCVSSCSARILGVLGFWKCI*ALKGWN Trigger: ATTCCAACCCTTCAGAGCCAATATGCACTTCCAGAA...ACCTAAAACTCCTAAAATTCTAGCTGAGCATGATGATACACACATGTACTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | CAAGAGGATTCAAGTATGTGGTCCACACAAAATACTGACTCTAAAGAGATGCTCAAATTTGGCAAAATGTaGACAAAGGTCATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QEDSSMWSTQNTDSKEMLKFGKM*TKVMAS Trigger: TGAAGCCATGACCTTTGTCAACATTTTGCCAAATTT...GAGCATCTCTTTAGAGTCAGTATTTTGTGTGGACCACATACTTGAATCCTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCATGCCTTCTAAGGGATACCAGAGCAAAAGACTCTTGTTTCTTAATTACAGACTCAGCTGTAGCTTaGTATTTTAAGGACAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FSCLLRDTRAKDSCFLITDSAVA*YFKDRY Trigger: ATACCTGTCCTTAAAATACAAAGCTACAGCTGAGTC...TGTAATTAAGAAACAAGAGTCTTTTGCTCTGGTATCCCTTAGAAGGCATGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS GCA 72 bp | AGATTGGAGAAGACCTCTGGGATCGTCAGGGCCCCTTaGACAGGCTGGCTGACGTGCTTTGAAATGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLEKTSGIVRAP*TGWLTCFEMMD Trigger: GTCCATCATTTCAAAGCACGTCAGCCAGCCTGTGCAAGGGGCCCTGACGATCCCAGAGGTCTTCTCCAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS TCA 72 bp | AGCAGTGCTTGGTCTGCTGGACCCATGTTGTTCACTTaGACTTCCAGCTTGGGGATCTTGCATGGCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSAWSAGPMLFT*TSSLGILHGLG Trigger: CCCCAAGCCATGCAAGATCCCCAAGCTGGAAGTTCAAGTGAACAACATGGGTCCAGCAGACCAAGCACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS CCA 72 bp | CTGCTGGACCCATGTTGTTCACTTGAACTTCCAGCTTaGGGATCTTGCATGGCTTGGGGGACAGATTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLDPCCSLELPA*GSCMAWGTDSS Trigger: ACTGGAATCTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGAAGTTCAAGTGAACAACATGGGTCCAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS TCA 72 bp | ACCCAGCAGCTGCCATCTCCTGTGGCGTCCATGATCTaGACGTGTCATAGGACTCAAAGGTCTTTAGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TQQLPSPVASMI*TCHRTQRSLVV Trigger: AACGACTAAAGACCTTTGAGTCCTATGACACGTTCAGATCATGGACGCCACAGGAGATGGCAGCTGCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS TCA 72 bp | CATCCCCAGTGGGAACAAGCAGTTCCTCTAAGTTCCTaGGAGAACCCAGAGCCTGGGCAAACTTTTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: HPQWEQAVPLSS*ENPEPGQTFLM Trigger: CATCAGAAAAGTTTGCCCAGGCTCTGGGTTCTCTCAGGAACTTAGAGGAACTGCTTGTTCCCACTGGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS GCA 72 bp | TCCCAGTTGCCCAAGCTTCCGCCACAGGAGAAACACTaGACAGTGTCCCTTTTACCTGTAAAGACAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SQLPKLPPQEKH*TVSLLPVKTKP Trigger: TGGCTTTGTCTTTACAGGTAAAAGGGACACTGTGCAGTGTTTCTCCTGTGGCGGAAGCTTGGGCAACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS CAA 72 bp | ACAGTGACCCAAAGCCTTGACAGTGGTGGCCTGAACTaGAATGCGTCCTGGGATATTCCTGCAGATGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TVTQSLDSGGLN*NASWDIPADVQ Trigger: CTGAACATCTGCAGGAATATCCCAGGACGCATTCAAGTTCAGGCCACCACTGTCAAGGCTTTGGGTCACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
||
| CDS GCA 72 bp | CCTACCCAAGTCCACCACTGTAGAATGAACTGCTGCTaGATCATCATGGTTGCTTTCACGTGTGGTTTCCGT | + |
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Preference number: 6 (lower is better) Translates to: PTQVHHCRMNCC*IIMVAFTCGFR Trigger: ACGGAAACCACACGTGAAAGCAACCATGATGATGCAGCAGCAGTTCATTCTACAGTGGTGGACTTGGGTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CCA 72 bp | CTGCATCATCATGGTTGCTTTCACGTGTGGTTTCCGTaGCTTCTGGAAGTGCATATTGGCTCTGAAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LHHHGCFHVWFP*LLEVHIGSEGL Trigger: CAACCCTTCAGAGCCAATATGCACTTCCAGAAGCCACGGAAACCACACGTGAAAGCAACCATGATGATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CCA 72 bp | TCATCCAACAGGAACAGCACCTGGTGTTGTAACTGCTaGATGCTGCTGCTCAGACACACTTCACTAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSNRNSTWCCNC*MLLLRHTSLMQ Trigger: CTGCATTAGTGAAGTGTGTCTGAGCAGCAGCATCCAGCAGTTACAACACCAGGTGCTGTTCCTGTTGGATGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CCA 72 bp | GTTGTTCACTTGAACTTCCAGCTTGGGGATCTTGCATaGCTTGGGGGACAGATTCCAGTACCCTTCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: VVHLNFQLGDLA*LGGQIPVPFTD Trigger: ATCAGTGAAGGGTACTGGAATCTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGAAGTTCAAGTGAACAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS GCA 72 bp | TTCACTCCTACCCAAGTCCACCACTGTAGAATGAACTaGTGCTGCATCATCATGGTTGCTTTCACGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: FTPTQVHHCRMN*CCIIMVAFTCG Trigger: ACCACACGTGAAAGCAACCATGATGATGCAGCAGCAGTTCATTCTACAGTGGTGGACTTGGGTAGGAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS TCA 72 bp | GACTCTGTAGAGGTTCTGATGGATAACTTCTCCATGTaGTGGAGGTTCAGGAACTCTTCAGGAAGGACTGAG | + |
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Preference number: 6 (lower is better) Translates to: DSVEVLMDNFSM*WRFRNSSGRTE Trigger: CTCAGTCCTTCCTGAAGAGTTCCTGAACCTCCATCACATGGAGAAGTTATCCATCAGAACCTCTACAGAGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS GCA 72 bp | CTGGGCAGATGCATTTTGATTCCAGTCATTACATACTaGTGCTACGAAGAGAGGGGTCTTGTAAACTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGRCILIPVITY*CYEERGLVNSL Trigger: CAGGGAGTTTACAAGACCCCTCTCTTCGTAGCAGCAGTATGTAATGACTGGAATCAAAATGCATCTGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS GCA 72 bp | TGGTGGCCTGAACTTGAATGCGTCCTGGGATATTCCTaGAGATGTTCAGCATTTGTAGGTTTGGCAAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: WWPELECVLGYS*RCSAFVGLASC Trigger: ACAACTTGCCAAACCTACAAATGCTGAACATCTGCAGGAATATCCCAGGACGCATTCAAGTTCAGGCCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS GCA 72 bp | GCATCTTCTCTGGACTCTTCACCCGGATGTCATACTTaGCAATGTTACCAACATCTTTTCCCTGAAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: ASSLDSSPGCHT*QCYQHLFPEGT Trigger: AGTTCCTTCAGGGAAAAGATGTTGGTAACATTGGCAAGTATGACATCCGGGTGAAGAGTCCAGAGAAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CAA 72 bp | TCATCCGTTCTTTATGGTCTTCTTCTTCTTGGCTCTTaGCCAGCTGAACTAGATTCATCCCGAAACGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSVLYGLLLLGS*PAELDSSRNEQ Trigger: CTGCTCGTTTCGGGATGAATCTAGTTCAGCTGGCAAAGAGCCAAGAAGAAGAAGACCATAAAGAACGGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CAA 90 bp | ATGGAAAAGTGTCACATCTTGAAAGTCATCCTGGGCAGATGCATTTaGATTCCAGTCATTACATACTGCTGCTACGAAGAGAGGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: MEKCHILKVILGRCI*IPVITYCCYEERGL Trigger: AAGACCCCTCTCTTCGTAGCAGCAGTATGTAATGACTGGAATCAAAATGCATCTGCCCAGGATGACTTTCAAGATGTGACACTTTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS TCA 72 bp | GTTCCTGAGAGAACCCAGAGCCTGGGCAAACTTTTCTaGTGTTTCCTTATCTGCAAATTGTTGACCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: VPERTQSLGKLF*CFLICKLLTFK Trigger: CTTAAAGGTCAACAATTTGCAGATAAGGAAACATCAGAAAAGTTTGCCCAGGCTCTGGGTTCTCTCAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CAA 72 bp | TGTCACATCTTGAAAGTCATCCTGGGCAGATGCATTTaGATTCCAGTCATTACATACTGCTGCTACGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: CHILKVILGRCI*IPVITYCCYEE Trigger: CTCTTCGTAGCAGCAGTATGTAATGACTGGAATCAAAATGCATCTGCCCAGGATGACTTTCAAGATGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CCA 72 bp | ACTATCCATTTCCAGAAGATAGTCAAGCGTTTGGACTaGGGGTGTCTTTCCTTCACATCATTAATCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: TIHFQKIVKRLD*GCLSFTSLITF Trigger: GAAAGTGATTAATGATGTGAAGGAAAGACACCCCCAGTCCAAACGCTTGACTATCTTCTGGAAATGGATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CAA 72 bp | CAGGTATTGCATGTAGGAATGGAAAAGTGTCACATCTaGAAAGTCATCCTGGGCAGATGCATTTTGATTCCA | + |
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Preference number: 6 (lower is better) Translates to: QVLHVGMEKCHI*KVILGRCILIP Trigger: TGGAATCAAAATGCATCTGCCCAGGATGACTTTCAAGATGTGACACTTTTCCATTCCTACATGCAATACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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| CDS CAA 72 bp | TGGCAAAATGTTGACAAAGGTCATGGCTTCAAAGCATaGTCCAGAAAACTCAATCTCTCTGAGTTTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: WQNVDKGHGFKA*SRKLNLSEFLA Trigger: TGCAAGAAACTCAGAGAGATTGAGTTTTCTGGACAATGCTTTGAAGCCATGACCTTTGTCAACATTTTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042220.3 ENSMUST00000118574.8 |
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