Pregenerated sensors for NAIP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071203Ensembl transcript IDs: ENSMUST00000049789.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTaGTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RASDLITDGCEPPCG*WDLNSGPSEEQSVL Trigger: GAGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR CCA 90 bp | GCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTaGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDLITDGCEPPCGC*DLNSGPSEEQSVLL Trigger: TAAGAGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR GCA 90 bp | TCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATaGTTCCTCATGTACAAGGCTGATTCAATCTATAAACAGACCATG | + |
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Preference number: 1 (lower is better) Translates to: SPGERVSCSHDKVNT*FLMYKADSIYKQTM Trigger: CATGGTCTGTTTATAGATTGAATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR TCA 90 bp | TTGGCTTTACATAGATCAATGTTCCTTTCACCAGCCCTTTCCTGTTaGCCTTGGTATTGGAAGGTTCCTTGTATGAACTTGAAGGAAACT | + |
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Preference number: 1 (lower is better) Translates to: LALHRSMFLSPALSC*PWYWKVPCMNLKET Trigger: AGTTTCCTTCAAGTTCATACAAGGAACCTTCCAATACCAAGGTCAACAGGAAAGGGCTGGTGAAAGGAACATTGATCTATGTAAAGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR GCA 90 bp | AGGCTGATTCAATCTATAAACAGACCATGTATATCCTCCACCCAGTaGTCCTATGATGTCTTGGCTTTACATAGATCAATGTTCCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RLIQSINRPCISSTQ*SYDVLALHRSMFLS Trigger: TGAAAGGAACATTGATCTATGTAAAGCCAAGACATCATAGGAGCACTGGGTGGAGGATATACATGGTCTGTTTATAGATTGAATCAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR TCA 72 bp | CCAGAACAGGGCATCAGATCTCATTACAGATGGTTGTaGGCCACCGTGTGGTTGCTGGGATTTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEQGIRSHYRWL*ATVWLLGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTGTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR GCA 72 bp | GATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTaGTGGGATTTGAACTCAGGACCTTCAGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLITDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR CCA 72 bp | CTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTaGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LITDGCEPPCGC*DLNSGPSEEQS Trigger: TGACTGCTCTTCTGAAGGTCCTGAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCACCTTTCCTGTTGACCTaGGTATTGGAAGGTTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: KVLQRLKSISWRESQLQPPFLLT*VLEGSL Trigger: CAAGGAACCTTCCAATACCAAGGTCAACAGGAAAGG...TGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR TCA 72 bp | CATAGATCAATGTTCCTTTCACCAGCCCTTTCCTGTTaGCCTTGGTATTGGAAGGTTCCTTGTATGAACTTG | + |
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Preference number: 3 (lower is better) Translates to: HRSMFLSPALSC*PWYWKVPCMNL Trigger: CAAGTTCATACAAGGAACCTTCCAATACCAAGGTCAACAGGAAAGGGCTGGTGAAAGGAACATTGATCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR GCA 72 bp | GAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATaGTTCCTCATGTACAAGGCTGATTCAATCTATAAA | + |
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Preference number: 3 (lower is better) Translates to: ERVSCSHDKVNT*FLMYKADSIYK Trigger: TTTATAGATTGAATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR GCA 72 bp | CAATCTATAAACAGACCATGTATATCCTCCACCCAGTaGTCCTATGATGTCTTGGCTTTACATAGATCAATG | + |
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Preference number: 3 (lower is better) Translates to: QSINRPCISSTQ*SYDVLALHRSM Trigger: CATTGATCTATGTAAAGCCAAGACATCATAGGAGCACTGGGTGGAGGATATACATGGTCTGTTTATAGATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AAAGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCAGGCCAGCTGCCCACATaGGGACACAGTGGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KVLQRLKSISWRESQLQPGQLPT*GHSGLE Trigger: CTCCAGGCCACTGTGTCCTCATGTGGGCAGCTGGCC...TGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | ACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGGATTTGAACTCAGGACCTTCACTACAGCAAAAGCACTaGACGCCAAGTCTCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWDLNSGPSLQQKH*TPSLTP Trigger: AGGGGTGAGACTTGGCGTTCAGTGCTTTTGCTGTAG...TGAAGGTCCTGAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | AGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGCTTTGCCACCTGAAATaGATCCACCCCGAGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SAAKTKEHLLERESAAAMLCHLK*IHPEKS Trigger: GCTCTTCTCGGGGTGGATGCATTTCAGGTGGCAAAG...CATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AACAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGGGATCTTGCATGGCTTaGGGGACAGTTTCCAGTACC | + |
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Preference number: 4 (lower is better) Translates to: NRASDLITDGCEPPCGCWGSCMA*GTVSST Trigger: GGTACTGGAAACTGTCCCCCAAGCCATGCAAGATCC...CCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATTGTTGGCGCTGCCTTTaGGGAAGAGTGGCTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: KEHLLERESAAAMIKSTHCWRCL*GRVAGD Trigger: GTCTCCAGCCACTCTTCCTCAAAGGCAGCGCCAACA...ATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGACCATGAGTTTCTAAGACCAGCTTGGGGATCTTaGATGGCTTGGGGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQPDHEFLRPAWGS*MAWGTV Trigger: AACTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGG...TCTTAGAAACTCATGGTCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AAAGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATCTCAGCATCTTCTCTaGCCTCTTCACCCGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: KVLQRLKSISWRESQLQPSQHLL*PLHPDV Trigger: GACATCCGGGTGAAGAGGCCAGAGAAGATGCTGAGA...TGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AACAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGACTCAGCTCCAGAGCTaGGCAGATGCTTTCAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: NRASDLITDGCEPPCGCWTQLQS*ADAFKE Trigger: TTCCTTGAAAGCATCTGCCCAGCTCTGGAGCTGAGT...CCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AACAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGAGGTCTTTAGTCGTTTaGCTTCACTGCGCATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NRASDLITDGCEPPCGCWRSLVV*LHCASV Trigger: CACAGATGCGCAGTGAAGCCAAACGACTAAAGACCT...CCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AACAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGAGCTGTTCTGGTAACTaGTTTGTCTCTGAGACCTCG | + |
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Preference number: 4 (lower is better) Translates to: NRASDLITDGCEPPCGCWSCSGN*FVSETS Trigger: CGAGGTCTCAGAGACAAACCAGTTACCAGAACAGCT...CCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGACCATGAGTTTCTAAGATGGGTCGTCACCTTCTaGCCACTTTTCCAAACATCC | + |
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Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQPDHEFLRWVVTF*PLFQTS Trigger: GGATGTTTGGAAAAGTGGGCAGAAGGTGACGACCCA...TCTTAGAAACTCATGGTCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | TTAACTATCTATAACTCCAGACCCAGGAGGGCCCAACATACTTTTCTGACCTCAGAGGACCTGGAGCAGTaGTTGATCTGCTGCATCCGT | + |
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Preference number: 4 (lower is better) Translates to: LTIYNSRPRRAQHTFLTSEDLEQ*LICCIR Trigger: ACGGATGCAGCAGATCAAGCACTGCTCCAGGTCCTC...TGAGGTCAGAAAAGTATGTTGGGCCCTCCTGGGTCTGGAGTTATAGATAGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | GCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATGCTTCAGGCCCAGGAACTTGTaGAAGTTATGGAAGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ASPGERVSCSHDKVNTCFRPRNL*KLWKSC Trigger: ACAGCTCTTCCATAACTTGCACAAGTTCCTGGGCCT...GAAGCATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AATGTTCCTTTCACCAGCCCTTTCCTGTTGACCTTGGTATTGGAAGGTTCCTTGGCTGGAGCACACTTCTaGCAAGTTCATGTGGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: NVPFTSPFLLTLVLEGSLAGAHF*QVHVAE Trigger: TTCCGCCACATGAACTTGCCAGAAGTGTGCTCCAGC...CAAGGAACCTTCCAATACCAAGGTCAACAGGAAAGGGCTGGTGAAAGGAACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATCTTGGGGATCTTGCATaGCTTGGGGGACAGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: KEHLLERESAAAMIKSTHLGDLA*LGGQFP Trigger: TGGAAACTGTCCCCCAAGCCATGCAAGATCCCCAAG...ATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGACCATGAGTTTCTAAGACTTGAACTTCCAGCTTaGGGATCTTGCATGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQPDHEFLRLELPA*GSCMAW Trigger: CCAAGCCATGCAAGATCCCCAAGCTGGAAGTTCAAG...TCTTAGAAACTCATGGTCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATTCCACCACTGTAGAATaGACTGCTGCTGCATCACCA | + |
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Preference number: 4 (lower is better) Translates to: KEHLLERESAAAMIKSTHSTTVE*TAAASP Trigger: TGGTGATGCAGCAGCAGTTCATTCTACAGTGGTGGA...ATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATATGTTGGCCAGTCCCTaGTCTGGTGTGATGGAACTA | + |
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Preference number: 4 (lower is better) Translates to: KEHLLERESAAAMIKSTHMLASP*SGVMEL Trigger: TAGTTCCATCACACCAGATCAGGGACTGGCCAACAT...ATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | GCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATGCTTCGGAAGCCACTGCTGTTaGATAAACGGAACTCAATAC | + |
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Preference number: 4 (lower is better) Translates to: ASPGERVSCSHDKVNTCFGSHCC*INGTQY Trigger: GTATTGAGTTCCGTTTATTCAACAGCAGTGGCTTCC...GAAGCATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AACAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGCTGGGCAAACTTTTCTaGCGTTTCCTTATCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: NRASDLITDGCEPPCGCWLGKLF*RFLIWK Trigger: TTTCCAGATAAGGAAACGTCAGAAAAGTTTGCCCAG...CCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AATGTTCCTTTCACCAGCCCTTTCCTGTTGACCTTGGTATTGGAAGGTTCCTTGGATGTGATCTTCCATTaGGTCGTCACCTTCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NVPFTSPFLLTLVLEGSLDVIFH*VVTFCP Trigger: TGGGCAGAAGGTGACGACCCAATGGAAGATCACATC...CAAGGAACCTTCCAATACCAAGGTCAACAGGAAAGGGCTGGTGAAAGGAACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | GCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATGCTTCGCAGCAAGAAACTCCTaGAACAGAGGACCTAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: ASPGERVSCSHDKVNTCFAARNS*NRGPKN Trigger: GTTTTTAGGTCCTCTGTTCCAGGAGTTTCTTGCTGC...GAAGCATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AAAGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGTCTGGTAGGGCTCTaGGTCGGATATTTTCATAGT | + |
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Preference number: 4 (lower is better) Translates to: KVLQRLKSISWRESQLQPCLVGL*VGYFHS Trigger: ACTATGAAAATATCCGACCCAGAGCCCTACCAGACA...TGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | ACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGGATTTGAACTCAGGACCTTCAAACTTGAATGCGTCCTaGGATATTCCTGCAGATGTT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWDLNSGPSNLNAS*DIPADV Trigger: AACATCTGCAGGAATATCCCAGGACGCATTCAAGTT...TGAAGGTCCTGAGTTCAAATCCCAGCAACCACACGGTGGCTCACAACCATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | CTGATTCAATCTATAAACAGACCATGTATATCCTCCACCCAGTGCTCCTATGATGGAGTTGGGCACAGATaGTGTTGGCCAGTCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LIQSINRPCISSTQCSYDGVGHR*CWPVPD Trigger: ATCAGGGACTGGCCAACATCATCTGTGCCCAACTCC...ATCATAGGAGCACTGGGTGGAGGATATACATGGTCTGTTTATAGATTGAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATGATCTCCTCATCTTaGGCAAAATTTCTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SAAKTKEHLLERESAAAMMISSS*AKFLLH Trigger: ATGGAGGAGAAATTTTGCTCAAGATGAGGAGATCAT...CATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AAAGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCAAAGCAAGCACAGCCATaGGAGACTCACAATTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: KVLQRLKSISWRESQLQPKQAQP*ETHNLK Trigger: TTTCAAATTGTGAGTCTCTCATGGCTGTGCTTGCTT...TGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTCTGCATCACCATGGTTaGTTTCACGTGTGGTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: SAAAMIKSTHASSCTRLILHHHG*FHVWFP Trigger: CGGAAACCACACGTGAAAGCAACCATGGTGATGCAG...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTCCCATGGGCATAAAATaGCCAGTCCTCAAAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: SAAAMIKSTHASSCTRLIPMGIK*PVLKGL Trigger: GAGTCCTTTGAGGACTGGCCATTTTATGCCCATGGG...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | AGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGAACTTGTGCAAGTTATaGAAGAGCTGTTCTGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: SAAKTKEHLLERESAAAMNLCKL*KSCSGN Trigger: GTTACCAGAACAGCTCTTCCATAACTTGCACAAGTT...CATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGACCATGAGTTTCTAAGAGAGGACTTCAAGGTTTaGAGAAATACACATTCGGGA | + |
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Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQPDHEFLREDFKV*RNTHSG Trigger: TCCCGAATGTGTATTTCTTCAAACCTTGAAGTCCTC...TCTTAGAAACTCATGGTCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AACAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGAATTTGGCAAAATGTTaGCAAAGGTCATGGCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: NRASDLITDGCEPPCGCWNLAKC*QRSWLQ Trigger: TTGAAGCCATGACCTTTGTCAACATTTTGCCAAATT...CCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTCAGTGCTTGATCTGCTaGATCCGTGTTGTTCACTTG | + |
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Preference number: 4 (lower is better) Translates to: SAAAMIKSTHASSCTRLIQCLIC*IRVVHL Trigger: CAAGTGAACAACACGGATGCAGCAGATCAAGCACTG...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | TTAACTATCTATAACTCCAGACCCAGGAGGGCCCAACATACTTTTCTGACCTCATCTGGCAAGTTCATGTaGCGGAAAGTGGCTTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: LTIYNSRPRRAQHTFLTSSGKFM*RKVALV Trigger: CACTAAAGCCACTTTCCGCCACATGAACTTGCCAGA...TGAGGTCAGAAAAGTATGTTGGGCCCTCCTGGGTCTGGAGTTATAGATAGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | TTGAAGGAAACTCTAGTCTTTAGACAGGAGAAATATACAAGGACTAAAAAGGCAAGTGTGTGTAGGGCTTaGGGGAGTGAGGCCAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKETLVFRQEKYTRTKKASVCRA*GSEASP Trigger: TGGGCTGGCCTCACTCCCCCAAGCCCTACACACACT...TGCCTTTTTAGTCCTTGTATATTTCTCCTGTCTAAAGACTAGAGTTTCCTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATTGGGCAGATGCATTTTaGATCCAGTCAGTACATACT | + |
|
Preference number: 4 (lower is better) Translates to: KEHLLERESAAAMIKSTHWADAF*IQSVHT Trigger: AGTATGTACTGACTGGATTCAAAATGCATCTGCCCA...ATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | CTGATTCAATCTATAAACAGACCATGTATATCCTCCACCCAGTGCTCCTATGATTCCGTGTTGTTCACTTaGACTTCCAGCTTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LIQSINRPCISSTQCSYDSVLFT*TSSLGI Trigger: GATCCCCAAGCTGGAAGTTCAAGTGAACAACACGGA...ATCATAGGAGCACTGGGTGGAGGATATACATGGTCTGTTTATAGATTGAATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTGTCAGTACATACTGCTaGTACAAAGAGAGGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAAAMIKSTHASSCTRLIVSTYC*YKERGL Trigger: AAGACCCCTCTCTTTGTAGCAGCAGTATGTACTGAC...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | ACTCTAGTCTTTAGACAGGAGAAATATACAAGGACTAAAAAGGCACTGTTCATTGAGGACACAGTGGCCTaGAGAGGCTCAGCTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVFRQEKYTRTKKALFIEDTVA*RGSAVA Trigger: AGCTACAGCTGAGCCTCTCCAGGCCACTGTGTCCTC...AATGAACAGTGCCTTTTTAGTCCTTGTATATTTCTCCTGTCTAAAGACTAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTCCGTGGAGGTTTGGATaGATAACTTCTCCATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAAAMIKSTHASSCTRLIPWRFG*ITSPCE Trigger: TTCACATGGAGAAGTTATCCATCCAAACCTCCACGG...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR CAA 72 bp | GTTCCTTTCACCAGCCCTTTCCTGTTGACCTTGGTATaGGAAGGTTCCTTGTATGAACTTGAAGGAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPFTSPFLLTLV*EGSLYELEGNS Trigger: AGAGTTTCCTTCAAGTTCATACAAGGAACCTTCCAATACCAAGGTCAACAGGAAAGGGCTGGTGAAAGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGACCATGAGTTTCTAAGAAAAAGTGTCACATCTTaGAATTTATCCTGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQPDHEFLRKSVTS*NLSWAD Trigger: ATCTGCCCAGGATAAATTTCAAGATGTGACACTTTT...TCTTAGAAACTCATGGTCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS-3UTR TCA 90 bp | TCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGACCATGAGTTTCTAAGATCCTCGGTAATCTTGTaGTTCATGGAAATATCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLLTTEPSLQPDHEFLRSSVIL*FMEISK Trigger: CTTAGATATTTCCATGAATCACAAGATTACCGAGGA...TCTTAGAAACTCATGGTCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | CTGATTCAATCTATAAACAGACCATGTATATCCTCCACCCAGTGCTCCTATGATCCAGTCAGTACATACTaGTGCTACAAAGAGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIQSINRPCISSTQCSYDPVSTY*CYKERG Trigger: ACCCCTCTCTTTGTAGCAGCAGTATGTACTGACTGG...ATCATAGGAGCACTGGGTGGAGGATATACATGGTCTGTTTATAGATTGAATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS-3UTR GCA 90 bp | GCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGATAAAGTCAACACATGCTTCTTTCCTCGAAGGAATTaGAAAATAAATGGAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASPGERVSCSHDKVNTCFFPRRN*KINGEH Trigger: ATGCTCTCCATTTATTTTGCAATTCCTTCGAGGAAA...GAAGCATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTCCAGGAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTGAAGAAATTCACATTTaGGGAACCACTTGGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SAAAMIKSTHASSCTRLIEEIHI*GTTWHA Trigger: AGCATGCCAAGTGGTTCCCCAAATGTGAATTTCTTC...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATTGAGGAAGAGTGGCTaGAGACATAATACAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KVLQRLKSISWRESQLQPLRKSG*RHNTKI Trigger: TATTTTTGTATTATGTCTCCAGCCACTCTTCCTCAA...TGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| 3UTR CAA 72 bp | TTAAGAGCACCTGTAGCTTTTACTGAGGATAAAGGTTaGGTGACCAGCACCCAAATGGAGACTCTTAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRAPVAFTEDKG*VTSTQMETLNY Trigger: ATAGTTAAGAGTCTCCATTTGGGTGCTGGTCACCAAACCTTTATCCTCAGTAAAAGCTACAGGTGCTCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS-3UTR TCA 90 bp | CTGATTCAATCTATAAACAGACCATGTATATCCTCCACCCAGTGCTCCTATGATTATTGCCTTCAGAGGTaGGTCGATTTGTCTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LIQSINRPCISSTQCSYDYCLQR*VDLSQI Trigger: TATTTGAGACAAATCGACTCACCTCTGAAGGCAATA...ATCATAGGAGCACTGGGTGGAGGATATACATGGTCTGTTTATAGATTGAATCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CCA 90 bp | ACTCTAGTCTTTAGACAGGAGAAATATACAAGGACTAAAAAGGCACTGTTCATTGACTCCGTGGAGGTTTaGATGGATAACTTCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TLVFRQEKYTRTKKALFIDSVEV*MDNFSM Trigger: CATGGAGAAGTTATCCATCCAAACCTCCACGGAGTC...AATGAACAGTGCCTTTTTAGTCCTTGTATATTTCTCCTGTCTAAAGACTAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR GCA 90 bp | TTGAAGGAAACTCTAGTCTTTAGACAGGAGAAATATACAAGGACTAAAAAGGCATTCTTCTTGGCTCTTTaGCACCTGAAATGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKETLVFRQEKYTRTKKAFFLAL*HLKCIH Trigger: GTGGATGCATTTCAGGTGGCAAAGAGCCAAGAAGAA...TGCCTTTTTAGTCCTTGTATATTTCTCCTGTCTAAAGACTAGAGTTTCCTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS-3UTR GCA 90 bp | ACTCTAGTCTTTAGACAGGAGAAATATACAAGGACTAAAAAGGCACTGTTCATTTGTAGAATGAACTGCTaGTGCATCACCATGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVFRQEKYTRTKKALFICRMNC*CITMVA Trigger: AGCAACCATGGTGATGCAGCAGCAGTTCATTCTACA...AATGAACAGTGCCTTTTTAGTCCTTGTATATTTCTCCTGTCTAAAGACTAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR TCA 90 bp | TTGAAGGAAACTCTAGTCTTTAGACAGGAGAAATATACAAGGACTAAAAAGGCAGAGAGACTCACAATTTaGAAGGAAATCACATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKETLVFRQEKYTRTKKAERLTI*KEITFQ Trigger: CTGAAATGTGATTTCCTTTCAAATTGTGAGTCTCTC...TGCCTTTTTAGTCCTTGTATATTTCTCCTGTCTAAAGACTAGAGTTTCCTTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS CCA 90 bp | AGGCCCAGGAACTTGTGCAAGTTATGGAAGAGCTGTTCTGGTAACTaGTTTGTCTCTGAGACCTCGAGAGACTGCAGGGCAGGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPRNLCKLWKSCSGN*FVSETSRDCRAGRV Trigger: CACCCTGCCTGCCCTGCAGTCTCTCGAGGTCTCAGAGACAAACCAGTTACCAGAACAGCTCTTCCATAACTTGCACAAGTTCCTGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | AGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGGACCTGGAGCAGTGCTaGATCTGCTGCATCCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SAAKTKEHLLERESAAAMDLEQC*ICCIRV Trigger: AACACGGATGCAGCAGATCAAGCACTGCTCCAGGTC...CATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | AATGTTCCTTTCACCAGCCCTTTCCTGTTGACCTTGGTATTGGAAGGTTCCTTGGATCGTCAGGGCCTCTaGCACAGGCTGGCTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: NVPFTSPFLLTLVLEGSLDRQGL*HRLADV Trigger: CACATCAGCCAGCCTGTGCAAGAGGCCCTGACGATC...CAAGGAACCTTCCAATACCAAGGTCAACAGGAAAGGGCTGGTGAAAGGAACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | AGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGGTTCTGGTAACTGGTTaGTCTCTGAGACCTCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAAKTKEHLLERESAAAMVLVTG*SLRPRE Trigger: CTCTCGAGGTCTCAGAGACAAACCAGTTACCAGAAC...CATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS TCA 90 bp | TGTGGTAAAACCCAGCAGCTGCCATCTCCTGTGGCGTCCATGATCTaGACGTGTCATAGGTCTCAAAGGTCTTTAGTCGTTTGGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CGKTQQLPSPVASMI*TCHRSQRSLVVWLH Trigger: GTGAAGCCAAACGACTAAAGACCTTTGAGACCTATGACACGTTCAGATCATGGACGCCACAGGAGATGGCAGCTGCTGGGTTTTACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 90 bp | CACCTCTCAGCATCTTCTCTGGCCTCTTCACCCGGATGTCATACTTaGCAATGTTACCAACATCTTTGCCCTGAAGGAACTCACATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HLSASSLASSPGCHT*QCYQHLCPEGTHIP Trigger: CGGAATGTGAGTTCCTTCAGGGCAAAGATGTTGGTAACATTGGCAAGTATGACATCCGGGTGAAGAGGCCAGAGAAGATGCTGAGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | AGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGTCCGGACGTAATTTCTaGTGTCTCTCTATGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAAKTKEHLLERESAAAMSGRNF*CLSMGS Trigger: GCTTCCCATAGAGAGACACAAGAAATTACGTCCGGA...CATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | AACAGGGCATCAGATCTCATTACAGATGGTTGTGAGCCACCGTGTGGTTGCTGGGGCTCAGCTGTAGCTTaGTATTTTAAGGACAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NRASDLITDGCEPPCGCWGSAVA*YFKDRY Trigger: ATACCTGTCCTTAAAATACAAAGCTACAGCTGAGCC...CCAGCAACCACACGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | CTGATTCAATCTATAAACAGACCATGTATATCCTCCACCCAGTGCTCCTATGATTCCAGCTTGGGGATCTaGCATGGCTTGGGGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LIQSINRPCISSTQCSYDSSLGI*HGLGDS Trigger: ACTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGA...ATCATAGGAGCACTGGGTGGAGGATATACATGGTCTGTTTATAGATTGAATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 90 bp | GCCTCTTCACCCGGATGTCATACTTGCCAATGTTACCAACATCTTTaGCCTGAAGGAACTCACATTCCGGACGTAATTTCTTGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSPGCHTCQCYQHL*PEGTHIPDVISCVS Trigger: AGAGACACAAGAAATTACGTCCGGAATGTGAGTTCCTTCAGGGCAAAGATGTTGGTAACATTGGCAAGTATGACATCCGGGTGAAGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | AGTGCTGCAAAGACTAAAGAGCATCTCCTGGAGAGAGAGTCAGCTGCAGCCATGGAAAAGTGTCACATCTaGAAATTTATCCTGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SAAKTKEHLLERESAAAMEKCHI*KFILGR Trigger: TCTGCCCAGGATAAATTTCAAGATGTGACACTTTTC...CATGGCTGCAGCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTTCAGCTCTTGTAGGTTaGGCAAGTTGTCCAGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAAAMIKSTHASSCTRLISALVG*ASCPGL Trigger: AAGCCCTGGACAACTTGCCAAACCTACAAGAGCTGA...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS TCA 90 bp | CACATTCCGGACGTAATTTCTTGTGTCTCTCTATGGGAAGCTTCCTaGGGCTGTTACCAAAGAGGATCAAGCTACAGCAAAAGCACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HIPDVISCVSLWEAS*GCYQRGSSYSKSTE Trigger: TTCAGTGCTTTTGCTGTAGCTTGATCCTCTTTGGTAACAGCCTCAGGAAGCTTCCCATAGAGAGACACAAGAAATTACGTCCGGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTACACACATGACAGAGTaGAGATTGGAGAAGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SAAAMIKSTHASSCTRLITHMTE*RLEKTS Trigger: CGAGGTCTTCTCCAATCTCAACTCTGTCATGTGTGT...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS TCA 90 bp | TTCACCCGGATGTCATACTTGCCAATGTTACCAACATCTTTGCCCTaGAGGAACTCACATTCCGGACGTAATTTCTTGTGTCTCTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: FTRMSYLPMLPTSLP*RNSHSGRNFLCLSM Trigger: CATAGAGAGACACAAGAAATTACGTCCGGAATGTGAGTTCCTTCAGGGCAAAGATGTTGGTAACATTGGCAAGTATGACATCCGGGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | TTAACTATCTATAACTCCAGACCCAGGAGGGCCCAACATACTTTTCTGACCTCAAGGAAGCCACTGCTGTaGAATAAACGGAACTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LTIYNSRPRRAQHTFLTSRKPLL*NKRNSI Trigger: TATTGAGTTCCGTTTATTCAACAGCAGTGGCTTCCT...TGAGGTCAGAAAAGTATGTTGGGCCCTCCTGGGTCTGGAGTTATAGATAGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 90 bp | GTAGGACTGGAAAAGTGTCACATCTTGAAATTTATCCTGGGCAGATaGATTTTGAATCCAGTCAGTACATACTGCTGCTACAAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGLEKCHILKFILGR*ILNPVSTYCCYKER Trigger: CCTCTCTTTGTAGCAGCAGTATGTACTGACTGGATTCAAAATGCATCTGCCCAGGATAAATTTCAAGATGTGACACTTTTCCAGTCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | CTGATTCAATCTATAAACAGACCATGTATATCCTCCACCCAGTGCTCCTATGATATGCTCTTCTTCTTCTaGGCTCTTTGCCACCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LIQSINRPCISSTQCSYDMLFFF*ALCHLK Trigger: TTTCAGGTGGCAAAGAGCCAAGAAGAAGAAGAGCAT...ATCATAGGAGCACTGGGTGGAGGATATACATGGTCTGTTTATAGATTGAATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS-3UTR CAA 90 bp | TCAGCTGCAGCCATGATAAAGTCAACACATGCTTCCTCATGTACAAGGCTGATTTTTTCCTCGAAGGAATaGCAAAATAAATGGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAAAMIKSTHASSCTRLIFSSKE*QNKWRA Trigger: TGCTCTCCATTTATTTTGCAATTCCTTCGAGGAAAA...AATCAGCCTTGTACATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 72 bp | AGATTGGAGAAGACCTCGGGGATCGTCAGGGCCTCTTaGACAGGCTGGCTGATGTGCTTTGAAATGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLEKTSGIVRAS*TGWLMCFEMMD Trigger: GTCCATCATTTCAAAGCACATCAGCCAGCCTGTGCAAGAGGCCCTGACGATCCCCGAGGTCTTCTCCAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS GCA 72 bp | TTCATGTCCTCTTCATCCAGGAGCCAACTGAGCATGTaGAGTCTGATGAGGCTGGGCAGTCGGGACACACAT | + |
|
Preference number: 6 (lower is better) Translates to: FMSSSSRSQLSM*SLMRLGSRDTH Trigger: ATGTGTGTCCCGACTGCCCAGCCTCATCAGACTGCACATGCTCAGTTGGCTCCTGGATGAAGAGGACATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS GCA 72 bp | CCGTGTTGTTCACTTGAACTTCCAGCTTGGGGATCTTaGATGGCTTGGGGGACAGTTTCCAGTACCCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PCCSLELPAWGS*MAWGTVSSTLH Trigger: GTGAAGGGTACTGGAAACTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGAAGTTCAAGTGAACAACACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS GCA 72 bp | GACTTCCATGAGGACCTGGAGCAGTGCTTGATCTGCTaGATCCGTGTTGTTCACTTGAACTTCCAGCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DFHEDLEQCLIC*IRVVHLNFQLG Trigger: CCCAAGCTGGAAGTTCAAGTGAACAACACGGATGCAGCAGATCAAGCACTGCTCCAGGTCCTCATGGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS CCA 72 bp | CTGCTGCATCCGTGTTGTTCACTTGAACTTCCAGCTTaGGGATCTTGCATGGCTTGGGGGACAGTTTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLHPCCSLELPA*GSCMAWGTVSS Trigger: ACTGGAAACTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGAAGTTCAAGTGAACAACACGGATGCAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS TCA 72 bp | ACCCAGCAGCTGCCATCTCCTGTGGCGTCCATGATCTaGACGTGTCATAGGTCTCAAAGGTCTTTAGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TQQLPSPVASMI*TCHRSQRSLVV Trigger: AACGACTAAAGACCTTTGAGACCTATGACACGTTCAGATCATGGACGCCACAGGAGATGGCAGCTGCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS TCA 72 bp | TGGGCTTCACTCCTACCCAAGTCCACCACTGTAGAATaGACTGCTGCTGCATCACCATGGTTGCTTTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: WASLLPKSTTVE*TAAASPWLLSR Trigger: ACGTGAAAGCAACCATGGTGATGCAGCAGCAGTTCATTCTACAGTGGTGGACTTGGGTAGGAGTGAAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS TCA 72 bp | TGCATGGCTTGGGGGACAGTTTCCAGTACCCTTCACTaGTGTCTGGTAGGGCTCTGGGTCGGATATTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CMAWGTVSSTLH*CLVGLWVGYFH Trigger: ATGAAAATATCCGACCCAGAGCCCTACCAGACATCAGTGAAGGGTACTGGAAACTGTCCCCCAAGCCATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS TCA 72 bp | GGAACTCAATACTCTGTGAAGCTGAGAAGACTTCCATaGGGACCTGGAGCAGTGCTTGATCTGCTGCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: GTQYSVKLRRLP*GPGAVLDLLHP Trigger: CGGATGCAGCAGATCAAGCACTGCTCCAGGTCCTCATGGAAGTCTTCTCAGCTTCACAGAGTATTGAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
||
| CDS GCA 72 bp | CCTACCCAAGTCCACCACTGTAGAATGAACTGCTGCTaGATCACCATGGTTGCTTTCACGTGTGGTTTCCGT | + |
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Preference number: 6 (lower is better) Translates to: PTQVHHCRMNCC*ITMVAFTCGFR Trigger: ACGGAAACCACACGTGAAAGCAACCATGGTGATGCAGCAGCAGTTCATTCTACAGTGGTGGACTTGGGTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CCA 72 bp | ATGGTACCTGGCTTTGCCACCTCTCAGCATCTTCTCTaGCCTCTTCACCCGGATGTCATACTTGCCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: MVPGFATSQHLL*PLHPDVILANV Trigger: AACATTGGCAAGTATGACATCCGGGTGAAGAGGCCAGAGAAGATGCTGAGAGGTGGCAAAGCCAGGTACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CCA 72 bp | CTGCATCACCATGGTTGCTTTCACGTGTGGTTTCCGTaGCTTCTGGAAGTGCATATTGGCTCTGAAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LHHHGCFHVWFP*LLEVHIGSEGL Trigger: CAACCCTTCAGAGCCAATATGCACTTCCAGAAGCCACGGAAACCACACGTGAAAGCAACCATGGTGATGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CAA 72 bp | TGTGCAAGTTATGGAAGAGCTGTTCTGGTAACTGGTTaGTCTCTGAGACCTCGAGAGACTGCAGGGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: CASYGRAVLVTG*SLRPRETAGQA Trigger: TGCCTGCCCTGCAGTCTCTCGAGGTCTCAGAGACAAACCAGTTACCAGAACAGCTCTTCCATAACTTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CAA 72 bp | ACATTGACCCAGAGCCTTGACAGTGGTGGCCTGAACTaGAATGCGTCCTGGGATATTCCTGCAGATGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TLTQSLDSGGLN*NASWDIPADVQ Trigger: CTGAACATCTGCAGGAATATCCCAGGACGCATTCAAGTTCAGGCCACCACTGTCAAGGCTCTGGGTCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 72 bp | ACTCCTACCCAAGTCCACCACTGTAGAATGAACTGCTaGTGCATCACCATGGTTGCTTTCACGTGTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TPTQVHHCRMNC*CITMVAFTCGF Trigger: GAAACCACACGTGAAAGCAACCATGGTGATGCAGCAGCAGTTCATTCTACAGTGGTGGACTTGGGTAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 72 bp | TTCACTCCTACCCAAGTCCACCACTGTAGAATGAACTaGTGCTGCATCACCATGGTTGCTTTCACGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: FTPTQVHHCRMN*CCITMVAFTCG Trigger: ACCACACGTGAAAGCAACCATGGTGATGCAGCAGCAGTTCATTCTACAGTGGTGGACTTGGGTAGGAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CCA 72 bp | GTTGTTCACTTGAACTTCCAGCTTGGGGATCTTGCATaGCTTGGGGGACAGTTTCCAGTACCCTTCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: VVHLNFQLGDLA*LGGQFPVPFTD Trigger: ATCAGTGAAGGGTACTGGAAACTGTCCCCCAAGCCATGCAAGATCCCCAAGCTGGAAGTTCAAGTGAACAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 72 bp | GCATCTTCTCTGGCCTCTTCACCCGGATGTCATACTTaGCAATGTTACCAACATCTTTGCCCTGAAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: ASSLASSPGCHT*QCYQHLCPEGT Trigger: AGTTCCTTCAGGGCAAAGATGTTGGTAACATTGGCAAGTATGACATCCGGGTGAAGAGGCCAGAGAAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CCA 72 bp | TCATCCAACAGGAACAGCACCTGGTGTTGTAACTGCTaGATGCTGCTGCTCAGACACACTTCACTAATGCAA | + |
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Preference number: 6 (lower is better) Translates to: SSNRNSTWCCNC*MLLLRHTSLMQ Trigger: TTGCATTAGTGAAGTGTGTCTGAGCAGCAGCATCCAGCAGTTACAACACCAGGTGCTGTTCCTGTTGGATGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CCA 72 bp | AACTTGTGCAAGTTATGGAAGAGCTGTTCTGGTAACTaGTTTGTCTCTGAGACCTCGAGAGACTGCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: NLCKLWKSCSGN*FVSETSRDCRA Trigger: TGCCCTGCAGTCTCTCGAGGTCTCAGAGACAAACCAGTTACCAGAACAGCTCTTCCATAACTTGCACAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CCA 72 bp | CTAGTTTGGAGAGGTCAGACTCCGTGGAGGTTTGGATaGATAACTTCTCCATGTGAAGGAGGTTTGGGAACT | + |
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Preference number: 6 (lower is better) Translates to: LVWRGQTPWRFG*ITSPCEGGLGT Trigger: AGTTCCCAAACCTCCTTCACATGGAGAAGTTATCCATCCAAACCTCCACGGAGTCTGACCTCTCCAAACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CCA 72 bp | AGCAGTTCCTCCAGGTTCCTGAGAGAACCCAGAGCCTaGGCAAACTTTTCTGACGTTTCCTTATCTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SSSSRFLREPRA*ANFSDVSLSGN Trigger: ATTTCCAGATAAGGAAACGTCAGAAAAGTTTGCCCAGGCTCTGGGTTCTCTCAGGAACCTGGAGGAACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 72 bp | CTGGGCAGATGCATTTTGAATCCAGTCAGTACATACTaGTGCTACAAAGAGAGGGGTCTTGTAAACTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGRCILNPVSTY*CYKERGLVNSL Trigger: CAGGGAGTTTACAAGACCCCTCTCTTTGTAGCAGCAGTATGTACTGACTGGATTCAAAATGCATCTGCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS GCA 72 bp | CCCGGATGTCATACTTGCCAATGTTACCAACATCTTTaGCCTGAAGGAACTCACATTCCGGACGTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: PGCHTCQCYQHL*PEGTHIPDVIS Trigger: AGAAATTACGTCCGGAATGTGAGTTCCTTCAGGGCAAAGATGTTGGTAACATTGGCAAGTATGACATCCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CAA 72 bp | CTTCATTTTCATCCGTTCTTTATGCTCTTCTTCTTCTaGGCTCTTTGCCACCTGAAATGCATCCACCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LHFHPFFMLFFF*ALCHLKCIHPE Trigger: CTCGGGGTGGATGCATTTCAGGTGGCAAAGAGCCAAGAAGAAGAAGAGCATAAAGAACGGATGAAAATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CAA 72 bp | AAGCATCGTCCAGAAAACTCAATCTCTCTGAGTTTCTaGCAGGAAGCAAGCACAGCCATGAGAGACTCACAA | + |
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Preference number: 6 (lower is better) Translates to: KHRPENSISLSF*QEASTAMRDSQ Trigger: TTGTGAGTCTCTCATGGCTGTGCTTGCTTCCTGCAAGAAACTCAGAGAGATTGAGTTTTCTGGACGATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS TCA 72 bp | GATTCAGGAGACACCAGCCACAACCCTCTAACAAACTaGAACCATAGAAAAGTTTGTGGATGGAGCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: DSGDTSHNPLTN*NHRKVCGWSFM Trigger: CATGAAGCTCCATCCACAAACTTTTCTATGGTTTCAGTTTGTTAGAGGGTTGTGGCTGGTGTCTCCTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS TCA 72 bp | GTTCCTGAGAGAACCCAGAGCCTGGGCAAACTTTTCTaGCGTTTCCTTATCTGGAAATTGTTGATCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: VPERTQSLGKLF*RFLIWKLLIFK Trigger: CTTAAAGATCAACAATTTCCAGATAAGGAAACGTCAGAAAAGTTTGCCCAGGCTCTGGGTTCTCTCAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CAA 90 bp | CTGGAAAAGTGTCACATCTTGAAATTTATCCTGGGCAGATGCATTTaGAATCCAGTCAGTACATACTGCTGCTACAAAGAGAGGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LEKCHILKFILGRCI*NPVSTYCCYKERGL Trigger: AAGACCCCTCTCTTTGTAGCAGCAGTATGTACTGACTGGATTCAAAATGCATCTGCCCAGGATAAATTTCAAGATGTGACACTTTTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS TCA 72 bp | ATGTCATACTTGCCAATGTTACCAACATCTTTGCCCTaGAGGAACTCACATTCCGGACGTAATTTCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: MSYLPMLPTSLP*RNSHSGRNFLC Trigger: ACACAAGAAATTACGTCCGGAATGTGAGTTCCTTCAGGGCAAAGATGTTGGTAACATTGGCAAGTATGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CAA 72 bp | TGTCACATCTTGAAATTTATCCTGGGCAGATGCATTTaGAATCCAGTCAGTACATACTGCTGCTACAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: CHILKFILGRCI*NPVSTYCCYKE Trigger: CTCTTTGTAGCAGCAGTATGTACTGACTGGATTCAAAATGCATCTGCCCAGGATAAATTTCAAGATGTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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| CDS CAA 72 bp | CAGGTATTGCATGTAGGACTGGAAAAGTGTCACATCTaGAAATTTATCCTGGGCAGATGCATTTTGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: QVLHVGLEKCHI*KFILGRCILNP Trigger: TGGATTCAAAATGCATCTGCCCAGGATAAATTTCAAGATGTGACACTTTTCCAGTCCTACATGCAATACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049789.3 |
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