Pregenerated sensors for NAIF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039164Ensembl transcript IDs: ENSMUST00000048431.3
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTCTGCAGCTAGCATTACACACGCCTCCTCGGAGAAGGGACAGTaGACAGCCACCTCACTGTCTCCAGGGGACCTCTTCCTGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: LSAASITHASSEKGQ*TATSLSPGDLFLGQ Trigger: CTGTCCCAGGAAGAGGTCCCCTGGAGACAGTGAGGTGGCTGTCCACTGTCCCTTCTCCGAGGAGGCGTGTGTAATGCTAGCTGCAGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 90 bp | TATGTGCAGTGGATTTCGGATGTGTGGTCCAGCGGAGGAGGAAGGTaGCGCCACAGAGCCTGGAGTCCTCCCAGAAAGGGTTCAGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: YVQWISDVWSSGGGR*RHRAWSPPRKGSAV Trigger: TACAGCTGAACCCTTTCTGGGAGGACTCCAGGCTCTGTGGCGCCACCTTCCTCCTCCGCTGGACCACACATCCGAAATCCACTGCACATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 90 bp | CTCTTACATTCAGGGACCGTCCTTGCTTTGGATTCGCTCAGCCAGTaGGGGGCAGGGAGCATCTTCAGGGCACCAGACACTGAGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LLHSGTVLALDSLSQ*GAGSIFRAPDTEKQ Trigger: CTGCTTCTCAGTGTCTGGTGCCCTGAAGATGCTCCCTGCCCCCCACTGGCTGAGCGAATCCAAAGCAAGGACGGTCCCTGAATGTAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR TCA 90 bp | AAGACGGTGCACCTGAGGTGGGGCAGCTCGCTGAGGATCGTGTGCTaGGACATAGCCCCAGTGAGAACCAGTCTGACTTTAAAGTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: KTVHLRWGSSLRIVC*DIAPVRTSLTLKLF Trigger: GAACAACTTTAAAGTCAGACTGGTTCTCACTGGGGCTATGTCTCAGCACACGATCCTCAGCGAGCTGCCCCACCTCAGGTGCACCGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR TCA 90 bp | TCATGGAAGACTAGAGAGTGGCTAACCCACCACACACAGCATTCCTaGGCCAGGCCAGGCTGGCTGCATAAGTCTCAGGGCATATCCAAG | + |
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Preference number: 1 (lower is better) Translates to: SWKTREWLTHHTQHS*ARPGWLHKSQGISK Trigger: CTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAATGCTGTGTGTGGTGGGTTAGCCACTCTCTAGTCTTCCATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR TCA 90 bp | ACACTGAGAAGCAGAGTAAGGGAGAGGAGTACTTGGGTGGGATGCTaGGCAGGGCTCTATGTGCAGTGGATTTCGGATGTGTGGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: TLRSRVRERSTWVGC*AGLYVQWISDVWSS Trigger: GCTGGACCACACATCCGAAATCCACTGCACATAGAGCCCTGCTCAGCATCCCACCCAAGTACTCCTCTCCCTTACTCTGCTTCTCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 90 bp | GGGAACTCCCAGTGGCGCTGGGAGACATTCTTATTTGGGTGTTATTaGATTTCTGCCAGCGACATTGGCAGGGTGGCACTCAGAAAGACG | + |
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Preference number: 1 (lower is better) Translates to: GNSQWRWETFLFGCY*ISASDIGRVALRKT Trigger: CGTCTTTCTGAGTGCCACCCTGCCAATGTCGCTGGCAGAAATGCAATAACACCCAAATAAGAATGTCTCCCAGCGCCACTGGGAGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 90 bp | CCTCTTCCTGGGACAGCAGTGGAGCTAAGCATCTCAAAGTGTGCATaGGTGGAAAGGCAACTTGGCCTCTTTGCTTGGCTAAGATCTGGA | + |
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Preference number: 1 (lower is better) Translates to: PLPGTAVELSISKCA*VERQLGLFAWLRSG Trigger: TCCAGATCTTAGCCAAGCAAAGAGGCCAAGTTGCCTTTCCACGCATGCACACTTTGAGATGCTTAGCTCCACTGCTGTCCCAGGAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 90 bp | TCAAGCCTTCGATCATGTCAACCCATGTCCCATCACCAGCATACATaGCTCCCAACTAAAATCTTCTCAGCAAGGCAGCTCCAGAGGTTG | + |
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Preference number: 1 (lower is better) Translates to: SSLRSCQPMSHHQHT*LPTKIFSARQLQRL Trigger: CAACCTCTGGAGCTGCCTTGCTGAGAAGATTTTAGTTGGGAGCCATGTATGCTGGTGATGGGACATGGGTTGACATGATCGAAGGCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR TCA 90 bp | TTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCATaGGTGTCCCAGATGTGGCAGCAACATGGCGAATGGGGTAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: FAWLRSGTLSCCHWS*VSQMWQQHGEWGRN Trigger: GTTTCTACCCCATTCGCCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR TCA 90 bp | CATGGCTCCCAACTAAAATCTTCTCAGCAAGGCAGCTCCAGAGGTTaGAGTGAGATATATTGGGTTCCAGGAGCCCAACAAATTAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: HGSQLKSSQQGSSRG*SEIYWVPGAQQISF Trigger: AAAACTAATTTGTTGGGCTCCTGGAACCCAATATATCTCACTTCAACCTCTGGAGCTGCCTTGCTGAGAAGATTTTAGTTGGGAGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCAGATGTGGCAGCAACATGGCGAATGGGGTAGAAACGTGGGAGCCTGAGGGTGGGGCAGCTCGCTaGGGATCGTGTGCTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: CPRCGSNMANGVETWEPEGGAAR*GSCAET Trigger: TGTCTCAGCACACGATCCTCAGCGAGCTGCCCCACC...CTCAGGCTCCCACGTTTCTACCCCATTCGCCATGTTGCTGCCACATCTGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGCGGAGGAGGAAGGTGGCGCCACAGAGCCTGGAGTCCTCCCAGAAAGGGTTTGGGCTGTGTCTGGGTaGTTACAGCAGTCAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PAEEEGGATEPGVLPERVWAVSG*LQQSRE Trigger: CTCTCTTGACTGCTGTAACCACCCAGACACAGCCCA...AACCCTTTCTGGGAGGACTCCAGGCTCTGTGGCGCCACCTTCCTCCTCCGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCAGATGTGGCAGCAACATGGCGAATGGGGTAGAAACGTGGGAGCCTGAGGCCTCGGAGAGAAGGTaGGAAGCCGGGCAACATGTA | + |
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Preference number: 2 (lower is better) Translates to: CPRCGSNMANGVETWEPEASERR*EAGQHV Trigger: TACATGTTGCCCGGCTTCCCACCTTCTCTCCGAGGC...CTCAGGCTCCCACGTTTCTACCCCATTCGCCATGTTGCTGCCACATCTGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR TCA 90 bp | CCTATCTTCCACCTCTTACATTCAGGGACCGTCCTTGCTTTGGATTCGCTCAGCCACACACAGCATTCCTaGGCCAGGCCAGGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PIFHLLHSGTVLALDSLSHTQHS*ARPGWL Trigger: CAGCCAGCCTGGCCTGGCTCAGGAATGCTGTGTGTG...GCTGAGCGAATCCAAAGCAAGGACGGTCCCTGAATGTAAGAGGTGGAAGATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGTGTCTGGGTGGTTACAGCAGTCAAGAGAGGAGTCCCCTGAGAATGGAGTTCTGCCAGCGACATTaGCAGGGTGGCACTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GLCLGGYSSQERSPLRMEFCQRH*QGGTQK Trigger: TTTCTGAGTGCCACCCTGCCAATGTCGCTGGCAGAA...CTCCATTCTCAGGGGACTCCTCTCTTGACTGCTGTAACCACCCAGACACAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CAA 90 bp | TTCAGGGCACCAGACACTGAGAAGCAGAGTAAGGGAGAGGAGTACTaGGGTGGGATGCTGAGCAGGGCTCTATGTGCAGTGGATTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: FRAPDTEKQSKGEEY*GGMLSRALCAVDFG Trigger: TCCGAAATCCACTGCACATAGAGCCCTGCTCAGCATCCCACCCAAGTACTCCTCTCCCTTACTCTGCTTCTCAGTGTCTGGTGCCCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCAAGTACACTGCAGCAGGAAACAGGACTCCACAGGGCTTTGCCTTCTAACAAGAAGGAGAAAGGACTaGGAACTCCCAGTGGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: PQVHCSRKQDSTGLCLLTRRRKD*ELPVAL Trigger: CAGCGCCACTGGGAGTTCCCAGTCCTTTCTCCTTCT...TGTTAGAAGGCAAAGCCCTGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CAA 90 bp | TGGGAACTCCCAGTGGCGCTGGGAGACATTCTTATTTGGGTGTTATaGCATTTCTGCCAGCGACATTGGCAGGGTGGCACTCAGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: WELPVALGDILIWVL*HFCQRHWQGGTQKD Trigger: GTCTTTCTGAGTGCCACCCTGCCAATGTCGCTGGCAGAAATGCAATAACACCCAAATAAGAATGTCTCCCAGCGCCACTGGGAGTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR TCA 90 bp | AACTTTGAGTTGTTGTCATTGGTCATGAGTGTCCCAGATGTGGCAGCAACATGGACTTGGGTGGGATGCTaGGCAGGGCTCTATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: NFELLSLVMSVPDVAATWTWVGC*AGLYVQ Trigger: CTGCACATAGAGCCCTGCTCAGCATCCCACCCAAGT...CCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCAGATGTGGCAGCAACATGGCGAATGGGGTAGAAACGTGGGAGCCTGAGCATCACCAGCATACATaGCTCCCAACTAAAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: CPRCGSNMANGVETWEPEHHQHT*LPTKIF Trigger: GAAGATTTTAGTTGGGAGCCATGTATGCTGGTGATG...CTCAGGCTCCCACGTTTCTACCCCATTCGCCATGTTGCTGCCACATCTGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CAA 90 bp | TGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATaGGTCATGAGTGTCCCAGATGTGGCAGCAACATGGCGAATGGGG | + |
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Preference number: 2 (lower is better) Translates to: WPLCLAKIWNFELLS*VMSVPDVAATWRMG Trigger: CCCCATTCGCCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR TCA 90 bp | AACTTTGAGTTGTTGTCATTGGTCATGAGTGTCCCAGATGTGGCAGCAACATGGAAGAGAGGAGTCCCCTaGGAATGGAGGCACAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: NFELLSLVMSVPDVAATWKRGVP*EWRHSE Trigger: CTCACTGTGCCTCCATTCTCAGGGGACTCCTCTCTT...CCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCAAGTACACTGCAGCAGGAAACAGGACTCCACAGGGCTTTGCCTTCTAACAGTGTTATTGCATTTCTaGCAGCGACATTGGCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PQVHCSRKQDSTGLCLLTVLLHF*QRHWQG Trigger: ACCCTGCCAATGTCGCTGGCAGAAATGCAATAACAC...TGTTAGAAGGCAAAGCCCTGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR GCA 90 bp | AACTTTGAGTTGTTGTCATTGGTCATGAGTGTCCCAGATGTGGCAGCAACATGGGATCCAGATAAACCTTaGCTGGCAGAGCCTCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: NFELLSLVMSVPDVAATWDPDKP*LAEPRR Trigger: TCTCCGAGGCTCTGCCAGGCAAGGTTTATCTGGATC...CCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CAA 90 bp | AAGGCAACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTaGTTGTCATTGGTCATGAGTGTCCCAGATGTGGCAGCAACATGG | + |
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Preference number: 2 (lower is better) Translates to: KATWPLCLAKIWNFE*LSLVMSVPDVAATW Trigger: CCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGTTGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCGGCATATCCAAGAGCTaGGCTGTGTCTGGGTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: TWPLCLAKIWNFELLSLVGISKS*AVSGWL Trigger: TAACCACCCAGACACAGCCCAGCTCTTGGATATGCC...GACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACAGCGGAGGAGGAAGGTaGCGCCACAGAGCCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNSGGGR*RHRAWS Trigger: ACTCCAGGCTCTGTGGCGCCACCTTCCTCCTCCGCT...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CCA 90 bp | AACTTTGAGTTGTTGTCATTGGTCATGAGTGTCCCAGATGTGGCAGCAACATGGTACCCAGAGGTGTCATaGAAGACTAGAGAGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: NFELLSLVMSVPDVAATWYPEVS*KTREWL Trigger: TAGCCACTCTCTAGTCTTCCATGACACCTCTGGGTA...CCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACTTATTTGGGTGTTATTaGATTTCTGCCAGCGACATT | + |
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Preference number: 2 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNLFGCY*ISASDI Trigger: AATGTCGCTGGCAGAAATGCAATAACACCCAAATAA...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 72 bp | TGGATTTCGGATGTGTGGTCCAGCGGAGGAGGAAGGTaGCGCCACAGAGCCTGGAGTCCTCCCAGAAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: WISDVWSSGGGR*RHRAWSPPRKG Trigger: ACCCTTTCTGGGAGGACTCCAGGCTCTGTGGCGCCACCTTCCTCCTCCGCTGGACCACACATCCGAAATCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 72 bp | TCAGGGACCGTCCTTGCTTTGGATTCGCTCAGCCAGTaGGGGGCAGGGAGCATCTTCAGGGCACCAGACACT | + |
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Preference number: 3 (lower is better) Translates to: SGTVLALDSLSQ*GAGSIFRAPDT Trigger: AGTGTCTGGTGCCCTGAAGATGCTCCCTGCCCCCCACTGGCTGAGCGAATCCAAAGCAAGGACGGTCCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 72 bp | GCTAGCATTACACACGCCTCCTCGGAGAAGGGACAGTaGACAGCCACCTCACTGTCTCCAGGGGACCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: ASITHASSEKGQ*TATSLSPGDLF Trigger: GAAGAGGTCCCCTGGAGACAGTGAGGTGGCTGTCCACTGTCCCTTCTCCGAGGAGGCGTGTGTAATGCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 72 bp | ACCACACACAGCATTCCTGAGCCAGGCCAGGCTGGCTaGATAAGTCTCAGGGCATATCCAAGAGCTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TTHSIPEPGQAG*ISLRAYPRAGL Trigger: CAGCCCAGCTCTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAATGCTGTGTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 72 bp | GGAGTACTTGGGTGGGATGCTGAGCAGGGCTCTATGTaGAGTGGATTTCGGATGTGTGGTCCAGCGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: GVLGWDAEQGSM*SGFRMCGPAEE Trigger: CTCCTCCGCTGGACCACACATCCGAAATCCACTGCACATAGAGCCCTGCTCAGCATCCCACCCAAGTACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR TCA 72 bp | GAAGCCGGGCAACATGTACTTCAGCCCTCTGAGCTATaGCCTGCTAGAGCACAGGTCTCAAAGGGCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: EAGQHVLQPSEL*PARAQVSKGHF Trigger: GAAGTGGCCCTTTGAGACCTGTGCTCTAGCAGGTCATAGCTCAGAGGGCTGAAGTACATGTTGCCCGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR TCA 72 bp | AGCAGAGTAAGGGAGAGGAGTACTTGGGTGGGATGCTaGGCAGGGCTCTATGTGCAGTGGATTTCGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: SRVRERSTWVGC*AGLYVQWISDV Trigger: CACATCCGAAATCCACTGCACATAGAGCCCTGCTCAGCATCCCACCCAAGTACTCCTCTCCCTTACTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 72 bp | CAGTGGCGCTGGGAGACATTCTTATTTGGGTGTTATTaGATTTCTGCCAGCGACATTGGCAGGGTGGCACTC | + |
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Preference number: 3 (lower is better) Translates to: QWRWETFLFGCY*ISASDIGRVAL Trigger: GAGTGCCACCCTGCCAATGTCGCTGGCAGAAATGCAATAACACCCAAATAAGAATGTCTCCCAGCGCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 72 bp | CAGCATCGAAAGTTTGAAAGTGATCCAGATAAACCTTaGCTGGCAGAGCCTCGGAGAGAAGGTGGGAAGCCG | + |
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Preference number: 3 (lower is better) Translates to: QHRKFESDPDKP*LAEPRREGGKP Trigger: CGGCTTCCCACCTTCTCTCCGAGGCTCTGCCAGGCAAGGTTTATCTGGATCACTTTCAAACTTTCGATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 72 bp | GGGACAGCAGTGGAGCTAAGCATCTCAAAGTGTGCATaGGTGGAAAGGCAACTTGGCCTCTTTGCTTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: GTAVELSISKCA*VERQLGLFAWL Trigger: TAGCCAAGCAAAGAGGCCAAGTTGCCTTTCCACGCATGCACACTTTGAGATGCTTAGCTCCACTGCTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 72 bp | ATCGAAAGTTTGAAAGTGATCCAGATAAACCTTGCCTaGCAGAGCCTCGGAGAGAAGGTGGGAAGCCGGGCA | + |
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Preference number: 3 (lower is better) Translates to: IESLKVIQINLA*QSLGEKVGSRA Trigger: TGCCCGGCTTCCCACCTTCTCTCCGAGGCTCTGCCAGGCAAGGTTTATCTGGATCACTTTCAAACTTTCGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 72 bp | TGGGAACTCCCAGTGGCGCTGGGAGACATTCTTATTTaGGTGTTATTGCATTTCTGCCAGCGACATTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: WELPVALGDILI*VLLHFCQRHWQ Trigger: CTGCCAATGTCGCTGGCAGAAATGCAATAACACCCAAATAAGAATGTCTCCCAGCGCCACTGGGAGTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR CCA 72 bp | CGATCATGTCAACCCATGTCCCATCACCAGCATACATaGCTCCCAACTAAAATCTTCTCAGCAAGGCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: RSCQPMSHHQHT*LPTKIFSARQL Trigger: GAGCTGCCTTGCTGAGAAGATTTTAGTTGGGAGCCATGTATGCTGGTGATGGGACATGGGTTGACATGATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 72 bp | CTGGGAGACATTCTTATTTGGGTGTTATTGCATTTCTaGCAGCGACATTGGCAGGGTGGCACTCAGAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: LGDILIWVLLHF*QRHWQGGTQKD Trigger: GTCTTTCTGAGTGCCACCCTGCCAATGTCGCTGGCAGAAATGCAATAACACCCAAATAAGAATGTCTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR TCA 72 bp | CTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCATaGGTGTCCCAGATGTGGCAGCAACATGGCGAATGG | + |
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Preference number: 3 (lower is better) Translates to: LRSGTLSCCHWS*VSQMWQQHGEW Trigger: CCATTCGCCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTTCCAGATCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACAAGGGAGAGGAGTACTaGGGTGGGATGCTGAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNKGEEY*GGMLSR Trigger: CCTGCTCAGCATCCCACCCAAGTACTCCTCTCCCTT...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR GCA 72 bp | AAAGTGTGCATGCGTGGAAAGGCAACTTGGCCTCTTTaGTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCA | + |
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Preference number: 3 (lower is better) Translates to: KVCMRGKATWPL*LAKIWNFELLS Trigger: TGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGTTGCCTTTCCACGCATGCACACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CAA 90 bp | CAATGGCTCAGTTTTCCAACCCTAGAGAAGAACCAAACTAGGTCACAAAACCTTTTTGAGTTGTTGTCATaGGTCATGAGTGTCCCAGAT | + |
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Preference number: 3 (lower is better) Translates to: QWLSFPTLEKNQTRSQNLFELLS*VMSVPD Trigger: ATCTGGGACACTCATGACCAATGACAACAACTCAAA...AAGGTTTTGTGACCTAGTTTGGTTCTTCTCTAGGGTTGGAAAACTGAGCCATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACCTTATTTGGGTGTTATaGCATTTCTGCCAGCGACAT | + |
|
Preference number: 3 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNLIWVL*HFCQRH Trigger: ATGTCGCTGGCAGAAATGCAATAACACCCAAATAAG...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAGATGTGGCAGCAACATGGCGAATGGGGTAGAAACGTGGGAGCCTGAGGTGCCCTCCATGGCCTaGGCCTGCCGTTCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPRCGSNMANGVETWEPEVPSMA*ACRSWA Trigger: TGCCCAGGAACGGCAGGCCCAGGCCATGGAGGGCAC...CTCAGGCTCCCACGTTTCTACCCCATTCGCCATGTTGCTGCCACATCTGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | AGCATTCCTGAGCCAGGCCAGGCTGGCTGCATAAGTCTCAGGGCATATCCAAGATGGGCCTGCCGTTCCTaGGCACAGGCCTGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SIPEPGQAGCISLRAYPRWACRS*AQACTS Trigger: GGAGGTGCAGGCCTGTGCCCAGGAACGGCAGGCCCA...TCTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGAGCCAGGCCAGGCTGGCTGCATAAGTCTCAGGGCATATCCAAGAGCTCCTGAGTGCCCTCCATaGCCTGGGCCTGCCGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPEPGQAGCISLRAYPRAPECPP*PGPAVP Trigger: AGGAACGGCAGGCCCAGGCCATGGAGGGCACTCAGG...AGCTCTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTGTGTCTGGGTGGTTACAGCAGTCAAGAGAGGAGTCCCCTGAGAATGGAGCTATGGCTGTGCCACTaGCACCACTGCCACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLCLGGYSSQERSPLRMELWLCH*HHCHCL Trigger: CAGGCAGTGGCAGTGGTGGCAGTGGCACAGCCATAG...CTCCATTCTCAGGGGACTCCTCTCTTGACTGCTGTAACCACCCAGACACAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | AGCATCTTCAGGGCACCAGACACTGAGAAGCAGAGTAAGGGAGAGGAGTACTTGCAGGGTGACGGTGGCTaGGGCTGTAGTGGCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIFRAPDTEKQSKGEEYLQGDGG*GCSGRG Trigger: TCCACGGCCACTACAGCCGCAGCCACCGTCACCCTG...CAAGTACTCCTCTCCCTTACTCTGCTTCTCAGTGTCTGGTGCCCTGAAGATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGAGCCAGGCCAGGCTGGCTGCATAAGTCTCAGGGCATATCCAAGAGCTGACGGACCTCGGTCTTaGGGTCGGACCACTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPEPGQAGCISLRAYPRADGPRS*GRTTSS Trigger: AGAAGAAGTGGTCCGACCTCAAGACCGAGGTCCGTC...AGCTCTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | GACTCCACAGGGCTTTGCCTTCTAACACTGACAGCACCAGAGGCTCTCCTGTGTAGGTTGGTGACCCGCTaGTCCTGGATCAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSTGLCLLTLTAPEALLCRLVTR*SWISLA Trigger: AGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCT...ACACAGGAGAGCCTCTGGTGCTGTCAGTGTTAGAAGGCAAAGCCCTGTGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAGATGTGGCAGCAACATGGCGAATGGGGTAGAAACGTGGGAGCCTGAGACCCCAGCATTGAAGTaGTTCACCAGCAGGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPRCGSNMANGVETWEPETPALK*FTSRCF Trigger: GAAGCACCTGCTGGTGAACCACTTCAATGCTGGGGT...CTCAGGCTCCCACGTTTCTACCCCATTCGCCATGTTGCTGCCACATCTGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGAGCCAGGCCAGGCTGGCTGCATAAGTCTCAGGGCATATCCAAGAGCTGTGACCCGCTGCTCCTaGATCAGCTTGGCTGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: IPEPGQAGCISLRAYPRAVTRCS*ISLAEL Trigger: CAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCAC...AGCTCTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR TCA 90 bp | CCTCAAGTACACTGCAGCAGGAAACAGGACTCCACAGGGCTTTGCCTTCTAACAGAGGGACCCCAGCATTaGAGTGGTTCACCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQVHCSRKQDSTGLCLLTEGPQH*SGSPAG Trigger: ACCTGCTGGTGAACCACTTCAATGCTGGGGTCCCTC...TGTTAGAAGGCAAAGCCCTGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR TCA 90 bp | ACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCACACTCAGGGCCGCCTaGGTGCCCTCCATGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWPLCLAKIWNFELLSLVTLRAA*VPSMAW Trigger: CCAGGCCATGGAGGGCACTCAGGCGGCCCTGAGTGT...GACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| 3UTR CAA 72 bp | AGTACACTGCAGCAGGAAACAGGACTCCACAGGGCTTaGCCTTCTAACACTGACAGCACCAGAGGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STLQQETGLHRA*PSNTDSTRGSP Trigger: AGGAGAGCCTCTGGTGCTGTCAGTGTTAGAAGGCAAAGCCCTGTGGAGTCCTGTTTCCTGCTGCAGTGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR TCA 90 bp | CCTCAAGTACACTGCAGCAGGAAACAGGACTCCACAGGGCTTTGCCTTCTAACATTATGTGCAGGTTGGTaGCCCGCTGCTCCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PQVHCSRKQDSTGLCLLTLCAGW*PAAPGS Trigger: TGATCCAGGAGCAGCGGGTCACCAACCTGCACATAA...TGTTAGAAGGCAAAGCCCTGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | ATTCCTGAGCCAGGCCAGGCTGGCTGCATAAGTCTCAGGGCATATCCAAGAGCTTGGTTCACCAGCAGGTaGTTCTTCAGTTCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPEPGQAGCISLRAYPRAWFTSR*FFSSSS Trigger: GGAACTGGAACTGAAGAAGCACCTGCTGGTGAACCA...AGCTCTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | CCTCAAGTACACTGCAGCAGGAAACAGGACTCCACAGGGCTTTGCCTTCTAACAGCGATCTCCTTTATGTaGAGGTTGGTGACCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQVHCSRKQDSTGLCLLTAISFM*RLVTRC Trigger: GCAGCGGGTCACCAACCTGCACATAAAGGAGATCGC...TGTTAGAAGGCAAAGCCCTGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | CAATGGCTCAGTTTTCCAACCCTAGAGAAGAACCAAACTAGGTCACAAAACCTTTCAGGGCCGCCTGAGTaGCCTCCATGGCCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QWLSFPTLEKNQTRSQNLSGPPE*PPWPGP Trigger: AGGCCCAGGCCATGGAGGGCACTCAGGCGGCCCTGA...AAGGTTTTGTGACCTAGTTTGGTTCTTCTCTAGGGTTGGAAAACTGAGCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | AACTTTGAGTTGTTGTCATTGGTCATGAGTGTCCCAGATGTGGCAGCAACATGGCTCTGTTGGCAGGGGTaGGGGCGCTTCAGCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NFELLSLVMSVPDVAATWLCWQG*GRFSCA Trigger: TGCACAGCTGAAGCGCCCCCACCCCTGCCAACAGAG...CCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| 3UTR CAA 72 bp | CCAGTGGCGCTGGGAGACATTCTTATTTGGGTGTTATaGCATTTCTGCCAGCGACATTGGCAGGGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PVALGDILIWVL*HFCQRHWQGGT Trigger: AGTGCCACCCTGCCAATGTCGCTGGCAGAAATGCAATAACACCCAAATAAGAATGTCTCCCAGCGCCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGAGCCAGGCCAGGCTGGCTGCATAAGTCTCAGGGCATATCCAAGAGCTCTCCACTTCCCGCTCTaGAAAGTTCATCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IPEPGQAGCISLRAYPRALHFPL*KVHLPL Trigger: AAGAGGAAGATGAACTTTTCAGAGCGGGAAGTGGAG...AGCTCTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | ACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCGATGCCATGCCAGGCTaGACTCTTGGCAGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWPLCLAKIWNFELLSLVDAMPG*TLGSQR Trigger: CCTCTGGCTGCCAAGAGTGCAGCCTGGCATGGCATC...GACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | AATAAAACTAGAGGTTCACCTCAAGTACACTGCAGCAGGAAACAGGACTCCACACAGGAGCTATGGCTGTaGCACTGCCACCACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKTRGSPQVHCSRKQDSTQELWL*HCHHCH Trigger: GTGGCAGTGGTGGCAGTGGCACAGCCATAGCTCCTG...TGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGGTGAACCTCTAGTTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | AATAAAACTAGAGGTTCACCTCAAGTACACTGCAGCAGGAAACAGGACTCCACAGGGGCGCTTCAGCTGTaGAGTACTCCACCACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTRGSPQVHCSRKQDSTGALQL*STPPLP Trigger: AGGGAGTGGTGGAGTACTGCACAGCTGAAGCGCCCC...TGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGGTGAACCTCTAGTTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | AACTTTGAGTTGTTGTCATTGGTCATGAGTGTCCCAGATGTGGCAGCAACATGGATGATGCTGTCTGGCTaGCCATTCTGGGCCACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NFELLSLVMSVPDVAATWMMLSG*PFWATG Trigger: ACCGGTGGCCCAGAATGGGCAGCCAGACAGCATCAT...CCATGTTGCTGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | ACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCACAGCAGCTCGGACTTaGGCAACCTTGCGACGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TWPLCLAKIWNFELLSLVTAART*ATLRRT Trigger: GGTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGT...GACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | GCCCATAGAAACCACTTAAAATTCCATAGACGTGTCCTTCAATCACAAGCAGAGATGGGCCGGAGGACCTaGATGAGGACACTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHRNHLKFHRRVLQSQAEMGRRT*MRTLRA Trigger: GGCCCTGAGTGTCCTCATCCAGGTCCTCCGGCCCAT...CTCTGCTTGTGATTGAAGGACACGTCTATGGAATTTTAAGTGGTTTCTATGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR TCA 90 bp | ACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCCCAGTTCCTCCACGATaGTCTCCACTTCCCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWPLCLAKIWNFELLSLVPVPPR*SPLPAL Trigger: CAGAGCGGGAAGTGGAGATCATCGTGGAGGAACTGG...GACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTCAGTTTTCCAACCCTAGAGAAGAACCAAACTAGGTCACAAAACCTTCCGAGGGCCACGGGATaGATCTCTGTGGTACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QWLSFPTLEKNQTRSQNLPRATG*ISVVLG Trigger: ACCCAGTACCACAGAGATCCATCCCGTGGCCCTCGG...AAGGTTTTGTGACCTAGTTTGGTTCTTCTCTAGGGTTGGAAAACTGAGCCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | AATAAAACTAGAGGTTCACCTCAAGTACACTGCAGCAGGAAACAGGACTCCACAGGCAGAGGCTGGGGCTaGGTTGGGAGTGTTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTRGSPQVHCSRKQDSTGRGWG*VGSVIL Trigger: CAGAATAACACTCCCAACCCAGCCCCAGCCTCTGCC...TGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGGTGAACCTCTAGTTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR TCA 90 bp | CAATGGCTCAGTTTTCCAACCCTAGAGAAGAACCAAACTAGGTCACAAAACCTTAGGTGGCCACAGCGTTaGCCCTTCTCAGGATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QWLSFPTLEKNQTRSQNLRWPQR*PFSGCH Trigger: ATGGCATCCTGAGAAGGGTCAACGCTGTGGCCACCT...AAGGTTTTGTGACCTAGTTTGGTTCTTCTCTAGGGTTGGAAAACTGAGCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCATGCTTCTCAGGATGCCATaGCAGGCTGCACTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPLCLAKIWNFELLSLVMLLRMP*QAALLA Trigger: TGCCAAGAGTGCAGCCTGGCATGGCATCCTGAGAAG...CATGACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACGCCAGGCTGCACTCTTaGCAGCCAGAGGGACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNARLHS*QPEGPQ Trigger: CTGGGGTCCCTCTGGCTGCCAAGAGTGCAGCCTGGC...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | GCCCATAGAAACCACTTAAAATTCCATAGACGTGTCCTTCAATCACAAGCAGAGGCAGTACAGGAGCTATaGCTGTGCCACTGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHRNHLKFHRRVLQSQAEAVQEL*LCHCHH Trigger: GTGGTGGCAGTGGCACAGCCATAGCTCCTGTACTGC...CTCTGCTTGTGATTGAAGGACACGTCTATGGAATTTTAAGTGGTTTCTATGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | TGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCATGTGCTGCTCCAGGTGCTaGGCGATCTCCTTTATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WPLCLAKIWNFELLSLVMCCSRC*AISFMC Trigger: GCACATAAAGGAGATCGCCCAGCACCTGGAGCAGCA...CATGACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | ACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCAGGCTGGGGCTGGGTTaGGAGTGTTATTCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWPLCLAKIWNFELLSLVRLGLG*ECYSVG Trigger: ACCTACAGAATAACACTCCCAACCCAGCCCCAGCCT...GACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR TCA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACCAGGCCTGCACCTCCTaGGAACGCCGGATCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNQACTS*ERRIIC Trigger: ACAGATGATCCGGCGTTCTCAGGAGGTGCAGGCCTG...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACAGCAGGCCATTCTGCTaGTCCAGGTGCTGGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNSRPFC*SRCWAI Trigger: GATCGCCCAGCACCTGGAGCAGCAGAATGGCCTGCT...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| 3UTR CAA 72 bp | TGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTaGTTGTCATTGGTCATGAGTGTCCCAGATGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPLCLAKIWNFE*LSLVMSVPDVA Trigger: TGCCACATCTGGGACACTCATGACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCATGTTGCAGATCCTCTGTTaGATAGGGGTCAGCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: WPLCLAKIWNFELLSLVMLQILC*IGVSST Trigger: TGTACTGCTGACCCCTATGCAACAGAGGATCTGCAA...CATGACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR CCA 90 bp | TTTAAAGTTGTTCTAAAGAGTGTGGGTGATGTCTCAAGCCTTCGATCATGTCAAATCTTCTGTGGGCCCTaGAGCTTCGCCACCTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FKVVLKSVGDVSSLRSCQIFCGP*SFATFY Trigger: GTAGAAGGTGGCGAAGCTCCAGGGCCCACAGAAGAT...TTGACATGATCGAAGGCTTGAGACATCACCCACACTCTTTAGAACAACTTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS-3UTR GCA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACTTCTGCTGCTCCAGGTaGTGGGCGATCTCCTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNFCCSR*WAISFM Trigger: CATAAAGGAGATCGCCCAGCACCTGGAGCAGCAGAA...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS GCA 90 bp | GTGGTAGGTGGTCTCGGTGGGGATCTGTGTCAGGGTGACGGTGGCTaGGGCTGTAGTGGCCGTGGATCCGAGGGCCACGGGATGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VVGGLGGDLCQGDGG*GCSGRGSEGHGMDL Trigger: GAGATCCATCCCGTGGCCCTCGGATCCACGGCCACTACAGCCGCAGCCACCGTCACCCTGACACAGATCCCCACCGAGACCACCTACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS CCA 90 bp | ACGGTGGCTGCGGCTGTAGTGGCCGTGGATCCGAGGGCCACGGGATaGATCTCTGTGGTACTGGGTAGGCTGATGATGGTGGCCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: TVAAAVVAVDPRATG*ISVVLGRLMMVASP Trigger: GGGTGAGGCCACCATCATCAGCCTACCCAGTACCACAGAGATCCATCCCGTGGCCCTCGGATCCACGGCCACTACAGCCGCAGCCACCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS CCA 90 bp | CACTGCCACTGCCTGTCCCAGGCCCACCAGCTCCATCATCTTCTGTaGGCCCTGGAGCTTCGCCACCTTCTACAGCAGCTCGGACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HCHCLSQAHQLHHLL*ALELRHLLQQLGLG Trigger: CCCAAGTCCGAGCTGCTGTAGAAGGTGGCGAAGCTCCAGGGCCCACAGAAGATGATGGAGCTGGTGGGCCTGGGACAGGCAGTGGCAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS GCA 90 bp | TCCCTACGGCAGGTGGCCACAGCGTTGACCCTTCTCAGGATGCCATaGCAGGCTGCACTCTTGGCAGCCAGAGGGACCCCAGCATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLRQVATALTLLRMP*QAALLAARGTPALK Trigger: CTTCAATGCTGGGGTCCCTCTGGCTGCCAAGAGTGCAGCCTGGCATGGCATCCTGAGAAGGGTCAACGCTGTGGCCACCTGCCGTAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
||
| CDS CCA 90 bp | TCTGTGGGCCCTGGAGCTTCGCCACCTTCTACAGCAGCTCGGACTTaGGCAACCTTGCGACGGACCTCGGTCTTGAGGTCGGACCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVGPGASPPSTAART*ATLRRTSVLRSDHF Trigger: GAAGTGGTCCGACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGTAGAAGGTGGCGAAGCTCCAGGGCCCACAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CCA 90 bp | ACTGCCTGTCCCAGGCCCACCAGCTCCATCATCTTCTGTGGGCCCTaGAGCTTCGCCACCTTCTACAGCAGCTCGGACTTGGGCAACCTT | + |
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Preference number: 5 (lower is better) Translates to: TACPRPTSSIIFCGP*SFATFYSSSDLGNL Trigger: AAGGTTGCCCAAGTCCGAGCTGCTGTAGAAGGTGGCGAAGCTCCAGGGCCCACAGAAGATGATGGAGCTGGTGGGCCTGGGACAGGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CCA 90 bp | GAACGCCGGATCATCTGTAGCAGGCCATTCTGCTGCTCCAGGTGCTaGGCGATCTCCTTTATGTGCAGGTTGGTGACCCGCTGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ERRIICSRPFCCSRC*AISFMCRLVTRCSW Trigger: CCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGAGATCGCCCAGCACCTGGAGCAGCAGAATGGCCTGCTACAGATGATCCGGCGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | TGTCCCAGATGTGGCAGCAACATGGCGAATGGGGTAGAAACGTGGGAGCCTGAGCAGGTGGCCACAGCGTaGACCCTTCTCAGGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: CPRCGSNMANGVETWEPEQVATA*TLLRMP Trigger: TGGCATCCTGAGAAGGGTCAACGCTGTGGCCACCTG...CTCAGGCTCCCACGTTTCTACCCCATTCGCCATGTTGCTGCCACATCTGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS GCA 90 bp | AGCAGGCCATTCTGCTGCTCCAGGTGCTGGGCGATCTCCTTTATGTaGAGGTTGGTGACCCGCTGCTCCTGGATCAGCTTGGCTGAATTG | + |
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Preference number: 5 (lower is better) Translates to: SRPFCCSRCWAISFM*RLVTRCSWISLAEL Trigger: CAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGAGATCGCCCAGCACCTGGAGCAGCAGAATGGCCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | AGCATTCCTGAGCCAGGCCAGGCTGGCTGCATAAGTCTCAGGGCATATCCAAGATCCTTTATGTGCAGGTaGGTGACCCGCTGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SIPEPGQAGCISLRAYPRSFMCR*VTRCSW Trigger: CCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGA...TCTTGGATATGCCCTGAGACTTATGCAGCCAGCCTGGCCTGGCTCAGGAATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | GACTCCACAGGGCTTTGCCTTCTAACACTGACAGCACCAGAGGCTCTCCTGTGTTCGGACCACTTCTTCTaGACTTCGGGCAGCTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: DSTGLCLLTLTAPEALLCSDHFF*TSGSSL Trigger: TAGGGAGCTGCCCGAAGTCAAGAAGAAGTGGTCCGA...ACACAGGAGAGCCTCTGGTGCTGTCAGTGTTAGAAGGCAAAGCCCTGTGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | TGTCCCAGATGTGGCAGCAACATGGCGAATGGGGTAGAAACGTGGGAGCCTGAGTTAAGTGCCTGTGGTTaGACAGATGTGTCTGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: CPRCGSNMANGVETWEPELSACG*TDVSGG Trigger: GCCCCCAGACACATCTGTCAAACCACAGGCACTTAA...CTCAGGCTCCCACGTTTCTACCCCATTCGCCATGTTGCTGCCACATCTGGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS GCA 90 bp | TCCAGGTGCTGGGCGATCTCCTTTATGTGCAGGTTGGTGACCCGCTaGTCCTGGATCAGCTTGGCTGAATTGAGGGCAATACGGCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: SRCWAISFMCRLVTR*SWISLAELRAIRLL Trigger: TAAAAGCCGTATTGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGAGATCGCCCAGCACCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | CCTATCTTCCACCTCTTACATTCAGGGACCGTCCTTGCTTTGGATTCGCTCAGCGTTGCAGATCCTCTGTaGCATAGGGGTCAGCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: PIFHLLHSGTVLALDSLSVADPL*HRGQQY Trigger: GTACTGCTGACCCCTATGCAACAGAGGATCTGCAAC...GCTGAGCGAATCCAAAGCAAGGACGGTCCCTGAATGTAAGAGGTGGAAGATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS TCA 90 bp | CTTTATGTGCAGGTTGGTGACCCGCTGCTCCTGGATCAGCTTGGCTaGATTGAGGGCAATACGGCTTTTAAGTGCCTGTGGTTTGACAGA | + |
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Preference number: 5 (lower is better) Translates to: LYVQVGDPLLLDQLG*IEGNTAFKCLWFDR Trigger: TCTGTCAAACCACAGGCACTTAAAAGCCGTATTGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACATAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | ACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCCGACGGACCTCGGTCTaGAGGTCGGACCACTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: TWPLCLAKIWNFELLSLVRRTSV*RSDHFF Trigger: GAAGAAGTGGTCCGACCTCAAGACCGAGGTCCGTCG...GACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | GCCCAACAAATTAGTTTTCCCAGTCTCCTTCATTTTTCTCACACCAACAAACCCCGGACTTGGGCAACCTaGCGACGGACCTCGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: AQQISFPSLLHFSHTNKPRTWAT*RRTSVL Trigger: CAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCG...GGGTTTGTTGGTGTGAGAAAAATGAAGGAGACTGGGAAAACTAATTTGTTGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | ACTTGGCCTCTTTGCTTGGCTAAGATCTGGAACTTTGAGTTGTTGTCATTGGTCTACAGCAGCTCGGACTaGGGCAACCTTGCGACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TWPLCLAKIWNFELLSLVYSSSD*GNLATD Trigger: GTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGTA...GACCAATGACAACAACTCAAAGTTCCAGATCTTAGCCAAGCAAAGAGGCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | AATAAAACTAGAGGTTCACCTCAAGTACACTGCAGCAGGAAACAGGACTCCACAAGAGGGACCCCAGCATaGAAGTGGTTCACCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKTRGSPQVHCSRKQDSTRGTPA*KWFTSR Trigger: CCTGCTGGTGAACCACTTCAATGCTGGGGTCCCTCT...TGTGGAGTCCTGTTTCCTGCTGCAGTGTACTTGAGGTGAACCTCTAGTTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | AGCATCTTCAGGGCACCAGACACTGAGAAGCAGAGTAAGGGAGAGGAGTACTTGATCAGCTTGGCTGAATaGAGGGCAATACGGCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SIFRAPDTEKQSKGEEYLISLAE*RAIRLL Trigger: TAAAAGCCGTATTGCCCTCAATTCAGCCAAGCTGAT...CAAGTACTCCTCTCCCTTACTCTGCTTCTCAGTGTCTGGTGCCCTGAAGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS-3UTR CAA 90 bp | GAAGAACAAGTTAGCTTAAGTAATCTAGGCTTCCTCTTTATGCACAAATGGAACGAGGCTGGGGCTGGGTaGGGAGTGTTATTCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEQVSLSNLGFLFMHKWNEAGAG*GVLFCR Trigger: CCTACAGAATAACACTCCCAACCCAGCCCCAGCCTC...GTTCCATTTGTGCATAAAGAGGAAGCCTAGATTACTTAAGCTAACTTGTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS GCA 72 bp | GGGCCTCTGTTGGCAGGGGTGGGGGCGCTTCAGCTGTaGAGTACTCCACCACTCCCTCCTCCAGCGTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GPLLAGVGALQL*STPPLPPPACG Trigger: ACCACACGCTGGAGGAGGGAGTGGTGGAGTACTGCACAGCTGAAGCGCCCCCACCCCTGCCAACAGAGGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS TCA 72 bp | CTTCGGGCAGCTCCCTACGGCAGGTGGCCACAGCGTTaGCCCTTCTCAGGATGCCATGCCAGGCTGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: LRAAPYGRWPQR*PFSGCHARLHS Trigger: AGAGTGCAGCCTGGCATGGCATCCTGAGAAGGGTCAACGCTGTGGCCACCTGCCGTAGGGAGCTGCCCGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS GCA 72 bp | CAGGTGGCCACAGCGTTGACCCTTCTCAGGATGCCATaGCAGGCTGCACTCTTGGCAGCCAGAGGGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: QVATALTLLRMP*QAALLAARGTP Trigger: TGGGGTCCCTCTGGCTGCCAAGAGTGCAGCCTGGCATGGCATCCTGAGAAGGGTCAACGCTGTGGCCACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | GCAACCTTGCGACGGACCTCGGTCTTGAGGTCGGACCACTTCTTCTaGACTTCGGGCAGCTCCCTACGGCAGGTGGCCACAGCGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: ATLRRTSVLRSDHFF*TSGSSLRQVATALT Trigger: GGTCAACGCTGTGGCCACCTGCCGTAGGGAGCTGCCCGAAGTCAAGAAGAAGTGGTCCGACCTCAAGACCGAGGTCCGTCGCAAGGTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CCA 72 bp | CCTGGAGCTTCGCCACCTTCTACAGCAGCTCGGACTTaGGCAACCTTGCGACGGACCTCGGTCTTGAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PGASPPSTAART*ATLRRTSVLRS Trigger: CGACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGTAGAAGGTGGCGAAGCTCCAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | CGACGGACCTCGGTCTTGAGGTCGGACCACTTCTTCTaGACTTCGGGCAGCTCCCTACGGCAGGTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: RRTSVLRSDHFF*TSGSSLRQVAT Trigger: TGTGGCCACCTGCCGTAGGGAGCTGCCCGAAGTCAAGAAGAAGTGGTCCGACCTCAAGACCGAGGTCCGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | CCCTGGAGCTTCGCCACCTTCTACAGCAGCTCGGACTaGGGCAACCTTGCGACGGACCTCGGTCTTGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PWSFATFYSSSD*GNLATDLGLEV Trigger: GACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGTAGAAGGTGGCGAAGCTCCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | TTCTTCTTGACTTCGGGCAGCTCCCTACGGCAGGTGGCCACAGCGTaGACCCTTCTCAGGATGCCATGCCAGGCTGCACTCTTGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FFLTSGSSLRQVATA*TLLRMPCQAALLAA Trigger: GGCTGCCAAGAGTGCAGCCTGGCATGGCATCCTGAGAAGGGTCAACGCTGTGGCCACCTGCCGTAGGGAGCTGCCCGAAGTCAAGAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | TTCTGTGGGCCCTGGAGCTTCGCCACCTTCTACAGCAGCTCGGACTaGGGCAACCTTGCGACGGACCTCGGTCTTGAGGTCGGACCACTT | + |
|
Preference number: 6 (lower is better) Translates to: FCGPWSFATFYSSSD*GNLATDLGLEVGPL Trigger: AAGTGGTCCGACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGTAGAAGGTGGCGAAGCTCCAGGGCCCACAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | GCTCGGACTTGGGCAACCTTGCGACGGACCTCGGTCTaGAGGTCGGACCACTTCTTCTTGACTTCGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ARTWATLRRTSV*RSDHFFLTSGS Trigger: GCTGCCCGAAGTCAAGAAGAAGTGGTCCGACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | TCGCCACCTTCTACAGCAGCTCGGACTTGGGCAACCTaGCGACGGACCTCGGTCTTGAGGTCGGACCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPPSTAARTWAT*RRTSVLRSDHF Trigger: GAAGTGGTCCGACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGTAGAAGGTGGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | TCTACAGCAGCTCGGACTTGGGCAACCTTGCGACGGACCTCGGTCTaGAGGTCGGACCACTTCTTCTTGACTTCGGGCAGCTCCCTACGG | + |
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Preference number: 6 (lower is better) Translates to: STAARTWATLRRTSV*RSDHFFLTSGSSLR Trigger: CCGTAGGGAGCTGCCCGAAGTCAAGAAGAAGTGGTCCGACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGTAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | CCTGGAGCTTCGCCACCTTCTACAGCAGCTCGGACTTGGGCAACCTaGCGACGGACCTCGGTCTTGAGGTCGGACCACTTCTTCTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: PGASPPSTAARTWAT*RRTSVLRSDHFFLT Trigger: AGTCAAGAAGAAGTGGTCCGACCTCAAGACCGAGGTCCGTCGCAAGGTTGCCCAAGTCCGAGCTGCTGTAGAAGGTGGCGAAGCTCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | CCATTCTGCTGCTCCAGGTGCTGGGCGATCTCCTTTATGTGCAGGTaGGTGACCCGCTGCTCCTGGATCAGCTTGGCTGAATTGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PFCCSRCWAISFMCR*VTRCSWISLAELRA Trigger: TGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGAGATCGCCCAGCACCTGGAGCAGCAGAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS GCA 72 bp | TTCTGCTGCTCCAGGTGCTGGGCGATCTCCTTTATGTaGAGGTTGGTGACCCGCTGCTCCTGGATCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FCCSRCWAISFM*RLVTRCSWISL Trigger: CAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGAGATCGCCCAGCACCTGGAGCAGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | TGCTCCAGGTGCTGGGCGATCTCCTTTATGTGCAGGTaGGTGACCCGCTGCTCCTGGATCAGCTTGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: CSRCWAISFMCR*VTRCSWISLAE Trigger: TTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGAGATCGCCCAGCACCTGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CCA 72 bp | ATCATCTGTAGCAGGCCATTCTGCTGCTCCAGGTGCTaGGCGATCTCCTTTATGTGCAGGTTGGTGACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: IICSRPFCCSRC*AISFMCRLVTR Trigger: GCGGGTCACCAACCTGCACATAAAGGAGATCGCCCAGCACCTGGAGCAGCAGAATGGCCTGCTACAGATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS TCA 72 bp | CAGGTTGGTGACCCGCTGCTCCTGGATCAGCTTGGCTaGATTGAGGGCAATACGGCTTTTAAGTGCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QVGDPLLLDQLG*IEGNTAFKCLW Trigger: CCACAGGCACTTAAAAGCCGTATTGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | GATGGTGGCCTCACCCAACAGGTTGCAGATCCTCTGTaGCATAGGGGTCAGCAGTACAGGAGCTATGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DGGLTQQVADPL*HRGQQYRSYGC Trigger: ACAGCCATAGCTCCTGTACTGCTGACCCCTATGCAACAGAGGATCTGCAACCTGTTGGGTGAGGCCACCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | CTGGGTAGGCTGATGATGGTGGCCTCACCCAACAGGTaGCAGATCCTCTGTTGCATAGGGGTCAGCAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LGRLMMVASPNR*QILCCIGVSST Trigger: TGTACTGCTGACCCCTATGCAACAGAGGATCTGCAACCTGTTGGGTGAGGCCACCATCATCAGCCTACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | TCTGTGGTACTGGGTAGGCTGATGATGGTGGCCTCACCCAACAGGTaGCAGATCCTCTGTTGCATAGGGGTCAGCAGTACAGGAGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: SVVLGRLMMVASPNR*QILCCIGVSSTGAM Trigger: CATAGCTCCTGTACTGCTGACCCCTATGCAACAGAGGATCTGCAACCTGTTGGGTGAGGCCACCATCATCAGCCTACCCAGTACCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS GCA 72 bp | AGAGGGACCCCAGCATTGAAGTGGTTCACCAGCAGGTaGTTCTTCAGTTCCAGTTCCTCCACGATGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGTPALKWFTSR*FFSSSSSTMIS Trigger: GGAGATCATCGTGGAGGAACTGGAACTGAAGAAGCACCTGCTGGTGAACCACTTCAATGCTGGGGTCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS GCA 72 bp | TGGGCGATCTCCTTTATGTGCAGGTTGGTGACCCGCTaGTCCTGGATCAGCTTGGCTGAATTGAGGGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: WAISFMCRLVTR*SWISLAELRAI Trigger: TATTGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGAGATCGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | ATGTGCAGGTTGGTGACCCGCTGCTCCTGGATCAGCTaGGCTGAATTGAGGGCAATACGGCTTTTAAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: MCRLVTRCSWIS*AELRAIRLLSA Trigger: GGCACTTAAAAGCCGTATTGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 72 bp | TTGGTGACCCGCTGCTCCTGGATCAGCTTGGCTGAATaGAGGGCAATACGGCTTTTAAGTGCCTGTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVTRCSWISLAE*RAIRLLSACGL Trigger: CAAACCACAGGCACTTAAAAGCCGTATTGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | ATGTGCAGGTTGGTGACCCGCTGCTCCTGGATCAGCTTGGCTGAATaGAGGGCAATACGGCTTTTAAGTGCCTGTGGTTTGACAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: MCRLVTRCSWISLAE*RAIRLLSACGLTDV Trigger: CACATCTGTCAAACCACAGGCACTTAAAAGCCGTATTGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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| CDS CAA 90 bp | ATCTCCTTTATGTGCAGGTTGGTGACCCGCTGCTCCTGGATCAGCTaGGCTGAATTGAGGGCAATACGGCTTTTAAGTGCCTGTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISFMCRLVTRCSWIS*AELRAIRLLSACGL Trigger: CAAACCACAGGCACTTAAAAGCCGTATTGCCCTCAATTCAGCCAAGCTGATCCAGGAGCAGCGGGTCACCAACCTGCACATAAAGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048431.3 |
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