Pregenerated sensors for NAGS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048217Ensembl transcript IDs: ENSMUST00000055409.6
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCCAGCCCCGTTTCCCAGGCTGGACATTGAAGGCCGTCTGGTTTaGCTTTGGAGCCGAGTCCTTAGCTGGCTTCACTTCCGTGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: IPAPFPRLDIEGRLV*LWSRVLSWLHFRVC Trigger: ACAAACACGGAAGTGAAGCCAGCTAAGGACTCGGCTCCAAAGTCAAACCAGACGGCCTTCAATGTCCAGCCTGGGAAACGGGGCTGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR-3UTR CCA 90 bp | GCTTCACTTCCGTGTTTGTTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTATTCCCCTCAGCTGCCTaGGGTCACCCCCAGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ASLPCLFCSGAPEQTMLLFPSAA*GHPQQA Trigger: TGCCTGCTGGGGGTGACCCCAGGCAGCTGAGGGGAA...TAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAGTGAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTCTGAAGGCAATCCCAGCCCCGTTTCCCAGGCTGGACATTGAAGGCCGTCAGACGATGCTGCTATaGTGCTGCAGCTTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RALKAIPAPFPRLDIEGRQTMLL*CCSFFP Trigger: GGGGAAGAAGCTGCAGCAGCATAGCAGCATCGTCTG...ACGGCCTTCAATGTCCAGCCTGGGAAACGGGGCTGGGATTGCCTTCAGAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR-3UTR CCA 90 bp | AAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGGCCTGCCCTTAAGCAGGCATGGCTTTTaGTCCATCCTGGCTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: KTMEPQDSPEAMETGLPLSRHGF*SILAVP Trigger: TGGGACAGCCAGGATGGACCAAAAGCCATGCCTGCT...TAAGGGCAGGCCAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR CCA 72 bp | GGGTCACCCCCAGCAGGCATGGCTTTTGGTCCATCCTaGCTGTCCCAGGGTTTACAGGGCCCGCGATGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GSPPAGMAFGPS*LSQGLQGPRWW Trigger: CCACCATCGCGGGCCCTGTAAACCCTGGGACAGCCAGGATGGACCAAAAGCCATGCCTGCTGGGGGTGACCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR TCA 72 bp | GGCTTCACTTCCGTGTTTGTTCTGCTCCGGGGCCCCTaGGCAGACGATGCTGCTATGCTGCTGCAGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: GFTSVFVLLRGP*ADDAAMLLQLL Trigger: AAGAAGCTGCAGCAGCATAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAGTGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR TCA 72 bp | GAAGGCAATCCCAGCCCCGTTTCCCAGGCTGGACATTaGAGGCCGTCTGGTTTGACTTTGGAGCCGAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: EGNPSPVSQAGH*RPSGLTLEPSP Trigger: AGGACTCGGCTCCAAAGTCAAACCAGACGGCCTTCAATGTCCAGCCTGGGAAACGGGGCTGGGATTGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR CCA 72 bp | CAGCCCCGTTTCCCAGGCTGGACATTGAAGGCCGTCTaGTTTGACTTTGGAGCCGAGTCCTTAGCTGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: QPRFPGWTLKAV*FDFGAESLAGF Trigger: GAAGCCAGCTAAGGACTCGGCTCCAAAGTCAAACCAGACGGCCTTCAATGTCCAGCCTGGGAAACGGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGCTTAGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCACAGCAGGCATGGCTTTaGGTCCATCCTGGCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: GRLRCYVRQWSLKTAQRPQQAWL*VHPGCP Trigger: GGGACAGCCAGGATGGACCAAAAGCCATGCCTGCTG...TGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCTAAGCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR TCA 72 bp | CCGTTTCCCAGGCTGGACATTGAAGGCCGTCTGGTTTaGCTTTGGAGCCGAGTCCTTAGCTGGCTTCACTTC | + |
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Preference number: 3 (lower is better) Translates to: PFPRLDIEGRLV*LWSRVLSWLHF Trigger: GAAGTGAAGCCAGCTAAGGACTCGGCTCCAAAGTCAAACCAGACGGCCTTCAATGTCCAGCCTGGGAAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR CCA 72 bp | AATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTaGCCTGCCCTTAAGGTTACCTTAGGTAGAGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: NGASRQPRGHGN*PALKVTLGRAL Trigger: CAGAGCTCTACCTAAGGTAACCTTAAGGGCAGGCCAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR GCA 72 bp | GAGACCCAAATGAGTGGCAGACCAGGCAGGCTTAGATaGTATGTAAGACAATGGAGCCTCAAGACAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: ETQMSGRPGRLR*YVRQWSLKTAQ Trigger: CTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCTAAGCCTGCCTGGTCTGCCACTCATTTGGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| 3UTR CAA 72 bp | TCAGCTGCCTGGGGTCACCCCCAGCAGGCATGGCTTTaGGTCCATCCTGGCTGTCCCAGGGTTTACAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SAAWGHPQQAWL*VHPGCPRVYRA Trigger: GGCCCTGTAAACCCTGGGACAGCCAGGATGGACCAAAAGCCATGCCTGCTGGGGGTGACCCCAGGCAGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | GCTCTGAAGGCAATCCCAGCCCCGTTTCCCAGGCTGGACATTGAAGGCCGTCTGGGCTGCGCAACCTTCTaGCCGCTGCAGCAGACCGCA | + |
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Preference number: 4 (lower is better) Translates to: ALKAIPAPFPRLDIEGRLGCATF*PLQQTA Trigger: TGCGGTCTGCTGCAGCGGCCAGAAGGTTGCGCAGCC...CAGACGGCCTTCAATGTCCAGCCTGGGAAACGGGGCTGGGATTGCCTTCAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | AAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGGCCTGCCCTTAGCCCTCGGCGTCCTCTaGGTGAGCCCTGGCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KTMEPQDSPEAMETGLPLALGVL*VSPGGA Trigger: AGCACCGCCAGGGCTCACGCAGAGGACGCCGAGGGC...TAAGGGCAGGCCAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | GCTTCACTTCCGTGTTTGTTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTAGCCTGGATGTCCCGCTaGACCAGTGATCTGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: ASLPCLFCSGAPEQTMLLAWMSR*TSDLPA Trigger: CGCCGGCAGATCACTGGTGCAGCGGGACATCCAGGC...TAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAGTGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR TCA 90 bp | GCTCTGAAGGCAATCCCAGCCCCGTTTCCCAGGCTGGACATTGAAGGCCGTCTGTCAGCACGTCCACGATaGGCCGAATCTGCTGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: ALKAIPAPFPRLDIEGRLSARPR*AESAAA Trigger: AGCGGCAGCAGATTCGGCTCATCGTGGACGTGCTGA...CAGACGGCCTTCAATGTCCAGCCTGGGAAACGGGGCTGGGATTGCCTTCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | CTTCCGTGTTTGTTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTATGCTGCCAGCCGTTTCCCCAATaGGGCACAGGATGGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: LPCLFCSGAPEQTMLLCCQPFPQ*GTGWGC Trigger: GCATCCCCATCCTGTGCCCCATTGGGGAAACGGCTG...GCAGCATAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR TCA 90 bp | CTTCCGTGTTTGTTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTATGCTGCAGCACCTTGCAGCTCTaGGCAAGCTGCGCCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LPCLFCSGAPEQTMLLCCSTLQL*ASCALA Trigger: AGCTAAGGCGCAGCTTGCTCAGAGCTGCAAGGTGCT...GCAGCATAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | CTGAGCAGACGATGCTGCTATGCTGCTGCAGCTTCTTCCCCTCAGCTGCCTGGGTGGTTCAGGAAGGCCTaGATGTCCCGCTGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: LSRRCCYAAAASSPQLPGWFRKA*MSRCTS Trigger: ACTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCA...CCCAGGCAGCTGAGGGGAAGAAGCTGCAGCAGCATAGCAGCATCGTCTGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | GCTTCACTTCCGTGTTTGTTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTAATCTGTCCAGAACCTTaGCCCTGGCGGCTGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASLPCLFCSGAPEQTMLLICPEP*PWRLEL Trigger: GAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGAT...TAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAGTGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | AGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGCGTGAGCCAGTGGCGTaGTTCCCCCGGGCTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: RCYVRQWSLKTAQRPWKLREPVA*FPRAGT Trigger: GGTGCCAGCCCGGGGGAAGCACGCCACTGGCTCACG...CAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | TTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTATGCTGCTGCAGCTTCTTCGGCACAGGATGGGGATaGTGTTGGATTCCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: FCSGAPEQTMLLCCCSFFGTGWG*CWIPDT Trigger: GGTGTCTGGAATCCAACAGCATCCCCATCCTGTGCC...GAAGAAGCTGCAGCAGCATAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | CCCCCAGCAGGCATGGCTTTTGGTCCATCCTGGCTGTCCCAGGGTTTACAGGGCCGGGCAGGTTCACGTTaGTCAGGATCTTCTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: PPAGMAFGPSWLSQGLQGRAGSR*SGSSDC Trigger: ACAGTCAGAAGATCCTGAGCAACGTGAACCTGCCCG...GCCCTGTAAACCCTGGGACAGCCAGGATGGACCAAAAGCCATGCCTGCTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | CCCAGAGGCCATGGAAACTGGCCTGCCCTTAAGGTTACCTTAGGTAGAGCTCTGAATTGCGTGAGCCAGTaGCGTGCTTCCCCCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRGHGNWPALKVTLGRALNCVSQ*RASPGL Trigger: CAGCCCGGGGGAAGCACGCCACTGGCTCACGCAATT...CAGAGCTCTACCTAAGGTAACCTTAAGGGCAGGCCAGTTTCCATGGCCTCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | TTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTATGCTGCTGCAGCTTCTTCGCCTGGGTCAGAAGCTaGTTTGCAGAAAGAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FCSGAPEQTMLLCCCSFFAWVRS*FAERVR Trigger: CCGGACTCTTTCTGCAAACCAGCTTCTGACCCAGGC...GAAGAAGCTGCAGCAGCATAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR TCA 90 bp | CTTAGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAAGCCACTCAGTCTCCGTaGGCCCCCAGGACCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LRCYVRQWSLKTAQRPWKATQSP*APRTSR Trigger: CCGGGAGGTCCTGGGGGCTCACGGAGACTGAGTGGC...TTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | GGCAGGCTTAGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCAAAGACAGCCAGAAGGTaGCGTGGGGGTAGGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRLRCYVRQWSLKTAQRPKTARR*RGGRQP Trigger: GGGCTGCCTACCCCCACGGCACCTTCTGGCTGTCTT...TGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCTAAGCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | CTGAGCAGACGATGCTGCTATGCTGCTGCAGCTTCTTCCCCTCAGCTGCCTGGGGATTCCAGACACCACTaGAACAGGTCTGTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: LSRRCCYAAAASSPQLPGDSRHH*NRSVST Trigger: GGTGGAGACAGACCTGTTGCAGTGGTGTCTGGAATC...CCCAGGCAGCTGAGGGGAAGAAGCTGCAGCAGCATAGCAGCATCGTCTGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | GCTCTGAAGGCAATCCCAGCCCCGTTTCCCAGGCTGGACATTGAAGGCCGTCTGTGGGCTGCAAAGCCTTaGCTAGAGATGCAGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: ALKAIPAPFPRLDIEGRLWAAKP*LEMQSP Trigger: AGGTGACTGCATCTCTAGCCAAGGCTTTGCAGCCCA...CAGACGGCCTTCAATGTCCAGCCTGGGAAACGGGGCTGGGATTGCCTTCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | GCCCTTAAGGTTACCTTAGGTAGAGCTCTGAAGGCAATCCCAGCCCCGTTTCCCCATCCACCAGCACCTTaGAGCTCTGAGCAAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: ALKVTLGRALKAIPAPFPHPPAP*SSEQAA Trigger: CGCAGCTTGCTCAGAGCTGCAAGGTGCTGGTGGATG...GGGAAACGGGGCTGGGATTGCCTTCAGAGCTCTACCTAAGGTAACCTTAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | AAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGGCCTGCCCTTAAGCGGCTGTAATGACTaGGGAGGAGTAGTGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KTMEPQDSPEAMETGLPLSGCND*GGVVRQ Trigger: CTGCCGCACTACTCCTCCGCAGTCATTACAGCCGCT...TAAGGGCAGGCCAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | GACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGGCCTGCCCTTAAGCCCCAGAACCACCAGTaGCTTCATGTCCATGCGTTG | + |
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Preference number: 4 (lower is better) Translates to: DNGASRQPRGHGNWPALKPQNHQ*LHVHAL Trigger: CAACGCATGGACATGAAGCCACTGGTGGTTCTGGGG...CTTAAGGGCAGGCCAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | CCCCCAGCAGGCATGGCTTTTGGTCCATCCTGGCTGTCCCAGGGTTTACAGGGCATGATTTTGGTGGGCTaGAAAGCCTTGGCTAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: PPAGMAFGPSWLSQGLQGMILVG*KALARD Trigger: ATCTCTAGCCAAGGCTTTGCAGCCCACCAAAATCAT...GCCCTGTAAACCCTGGGACAGCCAGGATGGACCAAAAGCCATGCCTGCTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | CTTAGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAAGCTGGCATGGGGAGCTaGCTCCGCAGCGCTCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: LRCYVRQWSLKTAQRPWKAGMGS*LRSAQY Trigger: GTACTGAGCGCTGCGGAGCCAGCTCCCCATGCCAGC...TTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR TCA 90 bp | GCTTCACTTCCGTGTTTGTTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTAATTCCGCAGGCCGCCTaGATTATTGAGGAAGATGAT | + |
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Preference number: 4 (lower is better) Translates to: ASLPCLFCSGAPEQTMLLIPQAA*IIEEDD Trigger: ATCATCTTCCTCAATAATTCAGGCGGCCTGCGGAAT...TAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAGTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | GGCAGGCTTAGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCAGGTCAGAAGCTGGTTTaGAGAAAGAGTCCGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GRLRCYVRQWSLKTAQRPGQKLV*RKSPAA Trigger: GGCTGCCGGACTCTTTCTGCAAACCAGCTTCTGACC...TGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCTAAGCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | CCCAGAGGCCATGGAAACTGGCCTGCCCTTAAGGTTACCTTAGGTAGAGCTCTGGGATGGGGATGCTGTTaGATTCCAGACACCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: PRGHGNWPALKVTLGRALGWGCC*IPDTTA Trigger: TGCAGTGGTGTCTGGAATCCAACAGCATCCCCATCC...CAGAGCTCTACCTAAGGTAACCTTAAGGGCAGGCCAGTTTCCATGGCCTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | GCCCTTAAGGTTACCTTAGGTAGAGCTCTGAAGGCAATCCCAGCCCCGTTTCCCCAATGGGGCACAGGATaGGGATGCTGTTGGATTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALKVTLGRALKAIPAPFPQWGTG*GCCWIP Trigger: TGGAATCCAACAGCATCCCCATCCTGTGCCCCATTG...GGGAAACGGGGCTGGGATTGCCTTCAGAGCTCTACCTAAGGTAACCTTAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | AAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGGCCTGCCCTTATTCATGTCCATGCGTTaGAAGAAGGCCAGGGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: KTMEPQDSPEAMETGLPLFMSMR*KKARAK Trigger: TTTCGCCCTGGCCTTCTTGCAACGCATGGACATGAA...TAAGGGCAGGCCAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | CTGAAGAATTTTGAGACCCAAATGAGTGGCAGACCAGGCAGGCTTAGATGCTATCCAGAACCTTGGCCCTaGCGGCTGGAGCTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: LKNFETQMSGRPGRLRCYPEPWP*RLELTT Trigger: TGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGG...ATAGCATCTAAGCCTGCCTGGTCTGCCACTCATTTGGGTCTCAAAATTCTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR TCA 90 bp | CTGAAGAATTTTGAGACCCAAATGAGTGGCAGACCAGGCAGGCTTAGATGCTATCCTCATCGACCTCCATaGCGGCGAAGGGCTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LKNFETQMSGRPGRLRCYPHRPP*RRRACP Trigger: TGGACAAGCCCTTCGCCGTCATGGAGGTCGATGAGG...ATAGCATCTAAGCCTGCCTGGTCTGCCACTCATTTGGGTCTCAAAATTCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | AGGCTTAGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGACGATGAGCCGAATCTaGTGCCGCTCTTTGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: RLRCYVRQWSLKTAQRPWTMSRI*CRSLML Trigger: GAGCATCAAAGAGCGGCAGCAGATTCGGCTCATCGT...CCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCTAAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | AGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGTGTCCAGATATGGGGTaGCCCCTAGTACAGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RCYVRQWSLKTAQRPWKLCPDMG*PLVQVP Trigger: TGGAACCTGTACTAGGGGGCACCCCATATCTGGACA...CAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | CATTTGCGGTTTAATCAAGGCCTCCTGAAGAATTTTGAGACCCAAATGAGTGGCGGGCTGGCACCACACTaGTTCAGGAAGGCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: HLRFNQGLLKNFETQMSGGLAPH*FRKAWM Trigger: CATCCAGGCCTTCCTGAACCAGTGTGGTGCCAGCCC...GCCACTCATTTGGGTCTCAAAATTCTTCAGGAGGCCTTGATTAAACCGCAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CCA 90 bp | CATTTGCGGTTTAATCAAGGCCTCCTGAAGAATTTTGAGACCCAAATGAGTGGCCTTGGCCCTGGCGGCTaGAGCTCACCACAAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: HLRFNQGLLKNFETQMSGLGPGG*SSPQIC Trigger: ACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAG...GCCACTCATTTGGGTCTCAAAATTCTTCAGGAGGCCTTGATTAAACCGCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR GCA 90 bp | CATTTGCGGTTTAATCAAGGCCTCCTGAAGAATTTTGAGACCCAAATGAGTGGCCAGAAGAAGATCCACTaGTTGTTGGAGAAGCTACCG | + |
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Preference number: 4 (lower is better) Translates to: HLRFNQGLLKNFETQMSGQKKIH*LLEKLP Trigger: CGGTAGCTTCTCCAACAAGCAGTGGATCTTCTTCTG...GCCACTCATTTGGGTCTCAAAATTCTTCAGGAGGCCTTGATTAAACCGCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 90 bp | GCCGGCGTCCCGGGCTGGCGCTCTTTGCCCCGCGCCGCCGCGCGCTaGCACTCAGTCTCCGTGAGCCCCCAGGACCTCCCGGGCTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGVPGWRSLPRAAAR*HSVSVSPQDLPGCA Trigger: TGCGCAGCCCGGGAGGTCCTGGGGGCTCACGGAGACTGAGTGGCAGCGCGCGGCGGCGCGGGGCAAAGAGCGCCAGCCCGGGACGCCGGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS TCA 90 bp | GGCGCTCTTTGCCCCGCGCCGCCGCGCGCTGCCACTCAGTCTCCGTaGGCCCCCAGGACCTCCCGGGCTGCGCAACCTTCTGGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GALCPAPPRAATQSP*APRTSRAAQPSGRC Trigger: GCAGCGGCCAGAAGGTTGCGCAGCCCGGGAGGTCCTGGGGGCTCACGGAGACTGAGTGGCAGCGCGCGGCGGCGCGGGGCAAAGAGCGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | TCAGTCTCCGTGAGCCCCCAGGACCTCCCGGGCTGCGCAACCTTCTaGCCGCTGCAGCAGACCGCAGGGCTGTGGCCACCCACGCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVSVSPQDLPGCATF*PLQQTAGLWPPTPS Trigger: CGACGGCGTGGGTGGCCACAGCCCTGCGGTCTGCTGCAGCGGCCAGAAGGTTGCGCAGCCCGGGAGGTCCTGGGGGCTCACGGAGACTGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS TCA 90 bp | GCAGGAGACTGGACACGACCCTTAGCGCCCTCGGCGTCCTCTGCGTaGGCCCTGGCGGTGCTGAGCCGGCGTCCCGGGCTGGCGCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGDWTRPLAPSASSA*ALAVLSRRPGLALF Trigger: AAAGAGCGCCAGCCCGGGACGCCGGCTCAGCACCGCCAGGGCTCACGCAGAGGACGCCGAGGGCGCTAAGGGTCGTGTCCAGTCTCCTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 90 bp | CCCGGGCTGGCACCACACTGGTTCAGGAAGGCCTGGATGTCCCGCTaGACCAGTGATCTGCCGGCGGGAGGCGCAGGGGATTCGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLAPHWFRKAWMSR*TSDLPAGGAGDSRG Trigger: GCCCCTCGAATCCCCTGCGCCTCCCGCCGGCAGATCACTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGTGGTGCCAGCCCGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | TGGCGTGCTTCCCCCGGGCTGGCACCACACTGGTTCAGGAAGGCCTaGATGTCCCGCTGCACCAGTGATCTGCCGGCGGGAGGCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRASPGLAPHWFRKA*MSRCTSDLPAGGAG Trigger: CCCTGCGCCTCCCGCCGGCAGATCACTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGTGGTGCCAGCCCGGGGGAAGCACGCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS TCA 90 bp | GGCACCACACTGGTTCAGGAAGGCCTGGATGTCCCGCTGCACCAGTaGTCTGCCGGCGGGAGGCGCAGGGGATTCGAGGGGCGTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTTLVQEGLDVPLHQ*SAGGRRRGFEGRWK Trigger: CTTCCAACGCCCCTCGAATCCCCTGCGCCTCCCGCCGGCAGATCACTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGTGGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 90 bp | CACACTGGTTCAGGAAGGCCTGGATGTCCCGCTGCACCAGTGATCTaGCGGCGGGAGGCGCAGGGGATTCGAGGGGCGTTGGAAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HTGSGRPGCPAAPVI*RREAQGIRGALEAV Trigger: CACCGCTTCCAACGCCCCTCGAATCCCCTGCGCCTCCCGCCGGCAGATCACTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 90 bp | GGGGTAGGCAGCCCCAGAACCACCAGTGGCTTCATGTCCATGCGTTaGAAGAAGGCCAGGGCGAAAGCCAGGCGGGATACCGCCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GVGSPRTTSGFMSMR*KKARAKARRDTACG Trigger: CCCGCAGGCGGTATCCCGCCTGGCTTTCGCCCTGGCCTTCTTGCAACGCATGGACATGAAGCCACTGGTGGTTCTGGGGCTGCCTACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 90 bp | ATGCGTTGCAAGAAGGCCAGGGCGAAAGCCAGGCGGGATACCGCCTaGGGGCACCGGATCACCTCCTCATCGACCTCCATGACGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MRCKKARAKARRDTA*GHRITSSSTSMTAK Trigger: CTTCGCCGTCATGGAGGTCGATGAGGAGGTGATCCGGTGCCCGCAGGCGGTATCCCGCCTGGCTTTCGCCCTGGCCTTCTTGCAACGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | AATTGCGTGAGCCAGTGGCGTGCTTCCCCCGGGCTGGCACCACACTaGTTCAGGAAGGCCTGGATGTCCCGCTGCACCAGTGATCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NCVSQWRASPGLAPH*FRKAWMSRCTSDLP Trigger: CGGCAGATCACTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGTGGTGCCAGCCCGGGGGAAGCACGCCACTGGCTCACGCAATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 90 bp | GTCCACCGAATGGTAGCAGGTCTGGAATTGCGTGAGCCAGTGGCGTaGTTCCCCCGGGCTGGCACCACACTGGTTCAGGAAGGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VHRMVAGLELREPVA*FPRAGTTLVQEGLD Trigger: ATCCAGGCCTTCCTGAACCAGTGTGGTGCCAGCCCGGGGGAAGCACGCCACTGGCTCACGCAATTCCAGACCTGCTACCATTCGGTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | ACAGCCAGAAGGTGCCGTGGGGGTAGGCAGCCCCAGAACCACCAGTaGCTTCATGTCCATGCGTTGCAAGAAGGCCAGGGCGAAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TARRCRGGRQPQNHQ*LHVHALQEGQGESQ Trigger: CTGGCTTTCGCCCTGGCCTTCTTGCAACGCATGGACATGAAGCCACTGGTGGTTCTGGGGCTGCCTACCCCCACGGCACCTTCTGGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | CCAGCGAGTCAAGGAGCACGGAACGGCGCGCAGCCGTTTCCCCAATaGGGCACAGGATGGGGATGCTGTTGGATTCCAGACACCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PASQGARNGAQPFPQ*GTGWGCCWIPDTTA Trigger: TGCAGTGGTGTCTGGAATCCAACAGCATCCCCATCCTGTGCCCCATTGGGGAAACGGCTGCGCGCCGTTCCGTGCTCCTTGACTCGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | AGCTTCTTGCCGAAGCTGGCGTTGACTAGGTTCACTAGGCGGCCCTaGTCCAGGCTGTCCAGGTTGCGCACTCGCAGCATCCGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLPKLALTRFTRRP*SRLSRLRTRSIRSA Trigger: TGCTGAGCGGATGCTGCGAGTGCGCAACCTGGACAGCCTGGACCAGGGCCGCCTAGTGAACCTAGTCAACGCCAGCTTCGGCAAGAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS TCA 90 bp | GGGATACCGCCTGCGGGCACCGGATCACCTCCTCATCGACCTCCATaGCGGCGAAGGGCTTGTCCACCGAATGGTAGCAGGTCTGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: GIPPAGTGSPPHRPP*RRRACPPNGSRSGI Trigger: AATTCCAGACCTGCTACCATTCGGTGGACAAGCCCTTCGCCGTCATGGAGGTCGATGAGGAGGTGATCCGGTGCCCGCAGGCGGTATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | GGAGCACGGAACGGCGCGCAGCCGTTTCCCCAATGGGGCACAGGATaGGGATGCTGTTGGATTCCAGACACCACTGCAACAGGTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GARNGAQPFPQWGTG*GCCWIPDTTATGLS Trigger: AGACAGACCTGTTGCAGTGGTGTCTGGAATCCAACAGCATCCCCATCCTGTGCCCCATTGGGGAAACGGCTGCGCGCCGTTCCGTGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS-3UTR CAA 90 bp | GACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGGCCTGCCCTTAAGTCCAGGCTGTCCAGGTaGCGCACTCGCAGCATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DNGASRQPRGHGNWPALKSRLSR*RTRSIR Trigger: GCGGATGCTGCGAGTGCGCAACCTGGACAGCCTGGA...CTTAAGGGCAGGCCAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTGTTTGTTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTATGCTGCATCTGCTGCCGCTCTTaGATGCTCAGCCACTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPCLFCSGAPEQTMLLCCICCRS*MLSHSA Trigger: CGCTGAGTGGCTGAGCATCAAAGAGCGGCAGCAGAT...GCAGCATAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 90 bp | GTTACTAAAGAGTTCCGTGAGCAGCGTGCTAGCGGCTGTAATGACTaGGGAGGAGTAGTGCGGCAGGCGGCTCAGCACGTCCACGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTKEFREQRASGCND*GGVVRQAAQHVHDE Trigger: CTCATCGTGGACGTGCTGAGCCGCCTGCCGCACTACTCCTCCGCAGTCATTACAGCCGCTAGCACGCTGCTCACGGAACTCTTTAGTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 90 bp | GGCCCTGGCGGCTGGAGCTCACCACAAATTTGTCCAGATATGGGGTaGCCCCTAGTACAGGTTCCACTGTCAGAATGGCTGCCGCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPGGWSSPQICPDMG*PLVQVPLSEWLPRC Trigger: ACAACGCGGCAGCCATTCTGACAGTGGAACCTGTACTAGGGGGCACCCCATATCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CAA 90 bp | TTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTATGCTGCTGCAGCTTCTTCCTTCATGTCCATGCGTaGCAAGAAGGCCAGGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: FCSGAPEQTMLLCCCSFFLHVHA*QEGQGE Trigger: TTCGCCCTGGCCTTCTTGCAACGCATGGACATGAAG...GAAGAAGCTGCAGCAGCATAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | TCTCTCCGAAGGCATTCCCACAGCATCTGTCCAGAACCTTGGCCCTaGCGGCTGGAGCTCACCACAAATTTGTCCAGATATGGGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRRHSHSICPEPWP*RLELTTNLSRYGVP Trigger: GGGCACCCCATATCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATGCTGTGGGAATGCCTTCGGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 90 bp | GAAGGCATTCCCACAGCATCTGTCCAGAACCTTGGCCCTGGCGGCTaGAGCTCACCACAAATTTGTCCAGATATGGGGTGCCCCCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EGIPTASVQNLGPGG*SSPQICPDMGCPLV Trigger: TACTAGGGGGCACCCCATATCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATGCTGTGGGAATGCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CCA 90 bp | TGCAGGTCTCTCCGAAGGCATTCCCACAGCATCTGTCCAGAACCTTaGCCCTGGCGGCTGGAGCTCACCACAAATTTGTCCAGATATGGG | + |
|
Preference number: 5 (lower is better) Translates to: CRSLRRHSHSICPEP*PWRLELTTNLSRYG Trigger: CCCATATCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATGCTGTGGGAATGCCTTCGGAGAGACCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGGCCATGGAAACTGGCCTGCCCTTAAGGTTACCTTAGGTAGAGCTCTGCAGGGATTGATGGGATaGGTGACCCTTGAGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRGHGNWPALKVTLGRALQGLMG*VTLERQ Trigger: CTGGCGCTCAAGGGTCACCAATCCCATCAATCCCTG...CAGAGCTCTACCTAAGGTAACCTTAAGGGCAGGCCAGTTTCCATGGCCTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CAA 90 bp | CTGAGCAGACGATGCTGCTATGCTGCTGCAGCTTCTTCCCCTCAGCTGCCTGGGAAGATCCACTGCTTGTaGGAGAAGCTACCGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRRCCYAAAASSPQLPGKIHCL*EKLPSL Trigger: CAGTGACGGTAGCTTCTCCAACAAGCAGTGGATCTT...CCCAGGCAGCTGAGGGGAAGAAGCTGCAGCAGCATAGCAGCATCGTCTGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 90 bp | CAGGGATTGATGGGATTGGTGACCCTTGAGCGCCAGAACAACGTTTaGAGGTCTCTCCGAAGGCATTCCCACAGCATCTGTCCAGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: QGLMGLVTLERQNNV*RSLRRHSHSICPEP Trigger: AGGTTCTGGACAGATGCTGTGGGAATGCCTTCGGAGAGACCTGCAAACGTTGTTCTGGCGCTCAAGGGTCACCAATCCCATCAATCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CAA 90 bp | CTTAGATGCTATGTAAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACATCTGTCCAGAACCTaGGCCCTGGCGGCTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRCYVRQWSLKTAQRPWKHLSRT*ALAAGA Trigger: AGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATG...TTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTTACATAGCATCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS-3UTR CAA 90 bp | GCTTCACTTCCGTGTTTGTTCTGCTCCGGGGCCCCTGAGCAGACGATGCTGCTAAAGAAGATCCACTGCTaGTTGGAGAAGCTACCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLPCLFCSGAPEQTMLLKKIHC*LEKLPS Trigger: TGACGGTAGCTTCTCCAACAAGCAGTGGATCTTCTT...TAGCAGCATCGTCTGCTCAGGGGCCCCGGAGCAGAACAAACACGGAAGTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS TCA 90 bp | GTCACTGTGCTTGAAGTACCAGGGATTGATGGGATTGGTGACCCTTaGGCGCCAGAACAACGTTTGCAGGTCTCTCCGAAGGCATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VTVLEVPGIDGIGDP*APEQRLQVSPKAFP Trigger: TGGGAATGCCTTCGGAGAGACCTGCAAACGTTGTTCTGGCGCTCAAGGGTCACCAATCCCATCAATCCCTGGTACTTCAAGCACAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 90 bp | TTCCGCAGGCCGCCTGAATTATTGAGGAAGATGATTTTGGTGGGCTaGAAAGCCTTGGCTAGAGATGCAGTCACCTCCAGCGAGTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRRPPELLRKMILVG*KALARDAVTSSESR Trigger: CCTTGACTCGCTGGAGGTGACTGCATCTCTAGCCAAGGCTTTGCAGCCCACCAAAATCATCTTCCTCAATAATTCAGGCGGCCTGCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS-3UTR CAA 90 bp | AAGACAATGGAGCCTCAAGACAGCCCAGAGGCCATGGAAACTGGCCTGCCCTTATTGAGGAAGATGATTTaGGTGGGCTGCAAAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KTMEPQDSPEAMETGLPLLRKMI*VGCKAL Trigger: CAAGGCTTTGCAGCCCACCAAAATCATCTTCCTCAA...TAAGGGCAGGCCAGTTTCCATGGCCTCTGGGCTGTCTTGAGGCTCCATTGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS TCA 90 bp | GTTCACGTTGCTCAGGATCTTCTGACTGTTATTCCGCAGGCCGCCTaGATTATTGAGGAAGATGATTTTGGTGGGCTGCAAAGCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHVAQDLLTVIPQAA*IIEEDDFGGLQSLG Trigger: GCCAAGGCTTTGCAGCCCACCAAAATCATCTTCCTCAATAATTCAGGCGGCCTGCGGAATAACAGTCAGAAGATCCTGAGCAACGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS-3UTR CAA 90 bp | TTTAATCAAGGCCTCCTGAAGAATTTTGAGACCCAAATGAGTGGCAGACCAGGCAGGATGGGGATGCTGTaGGATTCCAGACACCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FNQGLLKNFETQMSGRPGRMGML*DSRHHC Trigger: GCAGTGGTGTCTGGAATCCAACAGCATCCCCATCCT...GCCTGGTCTGCCACTCATTTGGGTCTCAAAATTCTTCAGGAGGCCTTGATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS-3UTR CAA 90 bp | CATTTGCGGTTTAATCAAGGCCTCCTGAAGAATTTTGAGACCCAAATGAGTGGCGTGGGCTGCAAAGCCTaGGCTAGAGATGCAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: HLRFNQGLLKNFETQMSGVGCKA*ARDAVT Trigger: GGTGACTGCATCTCTAGCCAAGGCTTTGCAGCCCAC...GCCACTCATTTGGGTCTCAAAATTCTTCAGGAGGCCTTGATTAAACCGCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS-3UTR CAA 90 bp | GACAAGCATTTGCGGTTTAATCAAGGCCTCCTGAAGAATTTTGAGACCCAAATGTTGCCGAAGCTGGCGTaGACTAGGTTCACTAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DKHLRFNQGLLKNFETQMLPKLA*TRFTRR Trigger: CCGCCTAGTGAACCTAGTCAACGCCAGCTTCGGCAA...CATTTGGGTCTCAAAATTCTTCAGGAGGCCTTGATTAAACCGCAAATGCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS-3UTR CAA 90 bp | CATTTGCGGTTTAATCAAGGCCTCCTGAAGAATTTTGAGACCCAAATGAGTGGCAGGCCGCCTGAATTATaGAGGAAGATGATTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HLRFNQGLLKNFETQMSGRPPEL*RKMILV Trigger: CACCAAAATCATCTTCCTCAATAATTCAGGCGGCCT...GCCACTCATTTGGGTCTCAAAATTCTTCAGGAGGCCTTGATTAAACCGCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 72 bp | GGCGGTGCTGAGCCGGCGTCCCGGGCTGGCGCTCTTTaGCCCGCGCCGCCGCGCGCTGCCACTCAGTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GGAEPASRAGAL*PAPPRAATQSP Trigger: CGGAGACTGAGTGGCAGCGCGCGGCGGCGCGGGGCAAAGAGCGCCAGCCCGGGACGCCGGCTCAGCACCGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS TCA 72 bp | TGCCCCGCGCCGCCGCGCGCTGCCACTCAGTCTCCGTaGGCCCCCAGGACCTCCCGGGCTGCGCAACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CPAPPRAATQSP*APRTSRAAQPS Trigger: AGAAGGTTGCGCAGCCCGGGAGGTCCTGGGGGCTCACGGAGACTGAGTGGCAGCGCGCGGCGGCGCGGGGCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CCA 72 bp | GTGAGCCCCCAGGACCTCCCGGGCTGCGCAACCTTCTaGCCGCTGCAGCAGACCGCAGGGCTGTGGCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: VSPQDLPGCATF*PLQQTAGLWPP Trigger: GGGTGGCCACAGCCCTGCGGTCTGCTGCAGCGGCCAGAAGGTTGCGCAGCCCGGGAGGTCCTGGGGGCTCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 72 bp | AGACTGGACACGACCCTTAGCGCCCTCGGCGTCCTCTaGGTGAGCCCTGGCGGTGCTGAGCCGGCGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RLDTTLSALGVL*VSPGGAEPASR Trigger: CCGGGACGCCGGCTCAGCACCGCCAGGGCTCACGCAGAGGACGCCGAGGGCGCTAAGGGTCGTGTCCAGTCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CAA 90 bp | GCACCAGTGATCTGCCGGCGGGAGGCGCAGGGGATTCGAGGGGCGTaGGAAGCGGTGTCCACGACGGCTCCTCGACCGCAGGAGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: APVICRREAQGIRGA*EAVSTTAPRPQETG Trigger: TCCAGTCTCCTGCGGTCGAGGAGCCGTCGTGGACACCGCTTCCAACGCCCCTCGAATCCCCTGCGCCTCCCGCCGGCAGATCACTGGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS TCA 72 bp | CTGGTTCAGGAAGGCCTGGATGTCCCGCTGCACCAGTaGTCTGCCGGCGGGAGGCGCAGGGGATTCGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVQEGLDVPLHQ*SAGGRRRGFEG Trigger: CCCCTCGAATCCCCTGCGCCTCCCGCCGGCAGATCACTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 72 bp | TCAGGAAGGCCTGGATGTCCCGCTGCACCAGTGATCTaGCGGCGGGAGGCGCAGGGGATTCGAGGGGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGRPGCPAAPVI*RREAQGIRGAL Trigger: CAACGCCCCTCGAATCCCCTGCGCCTCCCGCCGGCAGATCACTGGTGCAGCGGGACATCCAGGCCTTCCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS GCA 72 bp | GCACCACACTGGTTCAGGAAGGCCTGGATGTCCCGCTaGACCAGTGATCTGCCGGCGGGAGGCGCAGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: APHWFRKAWMSR*TSDLPAGGAGD Trigger: ATCCCCTGCGCCTCCCGCCGGCAGATCACTGGTGCAGCGGGACATCCAGGCCTTCCTGAACCAGTGTGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
||
| CDS CAA 90 bp | GGGGGTAGGCAGCCCCAGAACCACCAGTGGCTTCATGTCCATGCGTaGCAAGAAGGCCAGGGCGAAAGCCAGGCGGGATACCGCCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GGRQPQNHQWLHVHA*QEGQGESQAGYRLR Trigger: CCGCAGGCGGTATCCCGCCTGGCTTTCGCCCTGGCCTTCTTGCAACGCATGGACATGAAGCCACTGGTGGTTCTGGGGCTGCCTACCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | AAGAAGGCCAGGGCGAAAGCCAGGCGGGATACCGCCTaGGGGCACCGGATCACCTCCTCATCGACCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: KKARAKARRDTA*GHRITSSSTSM Trigger: CATGGAGGTCGATGAGGAGGTGATCCGGTGCCCGCAGGCGGTATCCCGCCTGGCTTTCGCCCTGGCCTTCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | GACACCACTGCAACAGGTCTGTCTCCACCGCGACGATaGCACCGTAGCTGGCATGGGGAGCTGGCTCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: DTTATGLSPPRR*HRSWHGELAPQ Trigger: CTGCGGAGCCAGCTCCCCATGCCAGCTACGGTGGCATCGTCGCGGTGGAGACAGACCTGTTGCAGTGGTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS TCA 72 bp | GCTTGTCCACCGAATGGTAGCAGGTCTGGAATTGCGTaGGCCAGTGGCGTGCTTCCCCCGGGCTGGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: ACPPNGSRSGIA*ASGVLPPGWHH Trigger: GTGGTGCCAGCCCGGGGGAAGCACGCCACTGGCTCACGCAATTCCAGACCTGCTACCATTCGGTGGACAAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS TCA 72 bp | CCTGCGGGCACCGGATCACCTCCTCATCGACCTCCATaGCGGCGAAGGGCTTGTCCACCGAATGGTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PAGTGSPPHRPP*RRRACPPNGSR Trigger: CCTGCTACCATTCGGTGGACAAGCCCTTCGCCGTCATGGAGGTCGATGAGGAGGTGATCCGGTGCCCGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | GAGTTCCGTGAGCAGCGTGCTAGCGGCTGTAATGACTaGGGAGGAGTAGTGCGGCAGGCGGCTCAGCACGTC | + |
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Preference number: 6 (lower is better) Translates to: EFREQRASGCND*GGVVRQAAQHV Trigger: GACGTGCTGAGCCGCCTGCCGCACTACTCCTCCGCAGTCATTACAGCCGCTAGCACGCTGCTCACGGAACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CCA 72 bp | CCGAAGCTGGCGTTGACTAGGTTCACTAGGCGGCCCTaGTCCAGGCTGTCCAGGTTGCGCACTCGCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: PKLALTRFTRRP*SRLSRLRTRSI Trigger: GATGCTGCGAGTGCGCAACCTGGACAGCCTGGACCAGGGCCGCCTAGTGAACCTAGTCAACGCCAGCTTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | GGCAGGCGGCTCAGCACGTCCACGATGAGCCGAATCTaGTGCCGCTCTTTGATGCTCAGCCACTCAGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: GRRLSTSTMSRI*CRSLMLSHSAL Trigger: CAACGCTGAGTGGCTGAGCATCAAAGAGCGGCAGCAGATTCGGCTCATCGTGGACGTGCTGAGCCGCCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CCA 72 bp | CAAGGAGCACGGAACGGCGCGCAGCCGTTTCCCCAATaGGGCACAGGATGGGGATGCTGTTGGATTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: QGARNGAQPFPQ*GTGWGCCWIPD Trigger: GTCTGGAATCCAACAGCATCCCCATCCTGTGCCCCATTGGGGAAACGGCTGCGCGCCGTTCCGTGCTCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | ATGGTAGCAGGTCTGGAATTGCGTGAGCCAGTGGCGTaGTTCCCCCGGGCTGGCACCACACTGGTTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: MVAGLELREPVA*FPRAGTTLVQE Trigger: TTCCTGAACCAGTGTGGTGCCAGCCCGGGGGAAGCACGCCACTGGCTCACGCAATTCCAGACCTGCTACCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | AGCCCCAGAACCACCAGTGGCTTCATGTCCATGCGTTaGAAGAAGGCCAGGGCGAAAGCCAGGCGGGATACC | + |
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Preference number: 6 (lower is better) Translates to: SPRTTSGFMSMR*KKARAKARRDT Trigger: GGTATCCCGCCTGGCTTTCGCCCTGGCCTTCTTGCAACGCATGGACATGAAGCCACTGGTGGTTCTGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | CAGCCCCAGAACCACCAGTGGCTTCATGTCCATGCGTaGCAAGAAGGCCAGGGCGAAAGCCAGGCGGGATAC | + |
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Preference number: 6 (lower is better) Translates to: QPQNHQWLHVHA*QEGQGESQAGY Trigger: GTATCCCGCCTGGCTTTCGCCCTGGCCTTCTTGCAACGCATGGACATGAAGCCACTGGTGGTTCTGGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | CACAGGATGGGGATGCTGTTGGATTCCAGACACCACTaGAACAGGTCTGTCTCCACCGCGACGATGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: HRMGMLLDSRHH*NRSVSTATMPP Trigger: CGGTGGCATCGTCGCGGTGGAGACAGACCTGTTGCAGTGGTGTCTGGAATCCAACAGCATCCCCATCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | AGGCGGCTCAGCACGTCCACGATGAGCCGAATCTGCTaGCGCTCTTTGATGCTCAGCCACTCAGCGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: RRLSTSTMSRIC*RSLMLSHSALV Trigger: TACCAACGCTGAGTGGCTGAGCATCAAAGAGCGGCAGCAGATTCGGCTCATCGTGGACGTGCTGAGCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CCA 72 bp | AACGGCGCGCAGCCGTTTCCCCAATGGGGCACAGGATaGGGATGCTGTTGGATTCCAGACACCACTGCAACA | + |
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Preference number: 6 (lower is better) Translates to: NGAQPFPQWGTG*GCCWIPDTTAT Trigger: TGTTGCAGTGGTGTCTGGAATCCAACAGCATCCCCATCCTGTGCCCCATTGGGGAAACGGCTGCGCGCCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 90 bp | AGGCGGCTCAGCACGTCCACGATGAGCCGAATCTGCTGCCGCTCTTaGATGCTCAGCCACTCAGCGTTGGTAACAAGGTCAAGGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RRLSTSTMSRICCRS*MLSHSALVTRSRSA Trigger: CGCTGACCTTGACCTTGTTACCAACGCTGAGTGGCTGAGCATCAAAGAGCGGCAGCAGATTCGGCTCATCGTGGACGTGCTGAGCCGCCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CCA 72 bp | CCCACAGCATCTGTCCAGAACCTTGGCCCTGGCGGCTaGAGCTCACCACAAATTTGTCCAGATATGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: PTASVQNLGPGG*SSPQICPDMGC Trigger: GCACCCCATATCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATGCTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CCA 72 bp | CTCCGAAGGCATTCCCACAGCATCTGTCCAGAACCTTaGCCCTGGCGGCTGGAGCTCACCACAAATTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LRRHSHSICPEP*PWRLELTTNLS Trigger: GGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATGCTGTGGGAATGCCTTCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 90 bp | ATGAGCCGAATCTGCTGCCGCTCTTTGATGCTCAGCCACTCAGCGTaGGTAACAAGGTCAAGGTCAGCGGGCAGGTTCACGTTGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: MSRICCRSLMLSHSA*VTRSRSAGRFTLLR Trigger: CCTGAGCAACGTGAACCTGCCCGCTGACCTTGACCTTGTTACCAACGCTGAGTGGCTGAGCATCAAAGAGCGGCAGCAGATTCGGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | ATCTGCTGCCGCTCTTTGATGCTCAGCCACTCAGCGTaGGTAACAAGGTCAAGGTCAGCGGGCAGGTTCACG | + |
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Preference number: 6 (lower is better) Translates to: ICCRSLMLSHSA*VTRSRSAGRFT Trigger: CGTGAACCTGCCCGCTGACCTTGACCTTGTTACCAACGCTGAGTGGCTGAGCATCAAAGAGCGGCAGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | TCTCCGAAGGCATTCCCACAGCATCTGTCCAGAACCTaGGCCCTGGCGGCTGGAGCTCACCACAAATTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SPKAFPQHLSRT*ALAAGAHHKFV Trigger: GACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATGCTGTGGGAATGCCTTCGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 90 bp | TTGCAGGTCTCTCCGAAGGCATTCCCACAGCATCTGTCCAGAACCTaGGCCCTGGCGGCTGGAGCTCACCACAAATTTGTCCAGATATGG | + |
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Preference number: 6 (lower is better) Translates to: LQVSPKAFPQHLSRT*ALAAGAHHKFVQIW Trigger: CCATATCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATGCTGTGGGAATGCCTTCGGAGAGACCTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | AGCACGTCCACGATGAGCCGAATCTGCTGCCGCTCTTaGATGCTCAGCCACTCAGCGTTGGTAACAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: STSTMSRICCRS*MLSHSALVTRS Trigger: TGACCTTGTTACCAACGCTGAGTGGCTGAGCATCAAAGAGCGGCAGCAGATTCGGCTCATCGTGGACGTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 90 bp | GAGTCTCGGATGTCGGCCAGGCCGAACCAGAAGAAGATCCACTGCTaGTTGGAGAAGCTACCGTCACTGTGCTTGAAGTACCAGGGATTG | + |
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Preference number: 6 (lower is better) Translates to: ESRMSARPNQKKIHC*LEKLPSLCLKYQGL Trigger: CAATCCCTGGTACTTCAAGCACAGTGACGGTAGCTTCTCCAACAAGCAGTGGATCTTCTTCTGGTTCGGCCTGGCCGACATCCGAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS TCA 72 bp | AGGTCAGCGGGCAGGTTCACGTTGCTCAGGATCTTCTaGCTGTTATTCCGCAGGCCGCCTGAATTATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RSAGRFTLLRIF*LLFRRPPELLR Trigger: CCTCAATAATTCAGGCGGCCTGCGGAATAACAGTCAGAAGATCCTGAGCAACGTGAACCTGCCCGCTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS TCA 72 bp | CTCAGAGACATAGATCGAGTGCAACCGAGGGCGCAGTaGCTCCAGATAGTCTTCTCGGAGCTTCTTGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: LRDIDRVQPRAQ*LQIVFSELLAE Trigger: TTCGGCAAGAAGCTCCGAGAAGACTATCTGGAGTCACTGCGCCCTCGGTTGCACTCGATCTATGTCTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | GGCTGGAGCTCACCACAAATTTGTCCAGATATGGGGTaGCCCCTAGTACAGGTTCCACTGTCAGAATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GWSSPQICPDMG*PLVQVPLSEWL Trigger: CAGCCATTCTGACAGTGGAACCTGTACTAGGGGGCACCCCATATCTGGACAAATTTGTGGTGAGCTCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS GCA 72 bp | ATGGGATTGGTGACCCTTGAGCGCCAGAACAACGTTTaGAGGTCTCTCCGAAGGCATTCCCACAGCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: MGLVTLERQNNV*RSLRRHSHSIC Trigger: ACAGATGCTGTGGGAATGCCTTCGGAGAGACCTGCAAACGTTGTTCTGGCGCTCAAGGGTCACCAATCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CCA 72 bp | AGGCATTCCCACAGCATCTGTCCAGAACCTTGGCCCTaGCGGCTGGAGCTCACCACAAATTTGTCCAGATAT | + |
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Preference number: 6 (lower is better) Translates to: RHSHSICPEPWP*RLELTTNLSRY Trigger: ATATCTGGACAAATTTGTGGTGAGCTCCAGCCGCCAGGGCCAAGGTTCTGGACAGATGCTGTGGGAATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | TCGGCCAGGCCGAACCAGAAGAAGATCCACTGCTTGTaGGAGAAGCTACCGTCACTGTGCTTGAAGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: SARPNQKKIHCL*EKLPSLCLKYQ Trigger: CTGGTACTTCAAGCACAGTGACGGTAGCTTCTCCAACAAGCAGTGGATCTTCTTCTGGTTCGGCCTGGCCGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 90 bp | TCTCGGATGTCGGCCAGGCCGAACCAGAAGAAGATCCACTGCTTGTaGGAGAAGCTACCGTCACTGTGCTTGAAGTACCAGGGATTGATG | + |
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Preference number: 6 (lower is better) Translates to: SRMSARPNQKKIHCL*EKLPSLCLKYQGLM Trigger: CATCAATCCCTGGTACTTCAAGCACAGTGACGGTAGCTTCTCCAACAAGCAGTGGATCTTCTTCTGGTTCGGCCTGGCCGACATCCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | GAGAAGCTACCGTCACTGTGCTTGAAGTACCAGGGATaGATGGGATTGGTGACCCTTGAGCGCCAGAACAAC | + |
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Preference number: 6 (lower is better) Translates to: EKLPSLCLKYQG*MGLVTLERQNN Trigger: GTTGTTCTGGCGCTCAAGGGTCACCAATCCCATCAATCCCTGGTACTTCAAGCACAGTGACGGTAGCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | ATGTCGGCCAGGCCGAACCAGAAGAAGATCCACTGCTaGTTGGAGAAGCTACCGTCACTGTGCTTGAAGTAC | + |
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Preference number: 6 (lower is better) Translates to: MSARPNQKKIHC*LEKLPSLCLKY Trigger: GTACTTCAAGCACAGTGACGGTAGCTTCTCCAACAAGCAGTGGATCTTCTTCTGGTTCGGCCTGGCCGACAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 90 bp | CCGCCTGAATTATTGAGGAAGATGATTTTGGTGGGCTGCAAAGCCTaGGCTAGAGATGCAGTCACCTCCAGCGAGTCAAGGAGCACGGAA | + |
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Preference number: 6 (lower is better) Translates to: PPELLRKMILVGCKA*ARDAVTSSESRSTE Trigger: TTCCGTGCTCCTTGACTCGCTGGAGGTGACTGCATCTCTAGCCAAGGCTTTGCAGCCCACCAAAATCATCTTCCTCAATAATTCAGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 90 bp | ACTCGCAGCATCCGCTCAGCATTTTTAAACAGGGTGCCACAGCCCTaGTTACTAAAGAGTTCCGTGAGCAGCGTGCTAGCGGCTGTAATG | + |
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Preference number: 6 (lower is better) Translates to: TRSIRSAFLNRVPQP*LLKSSVSSVLAAVM Trigger: CATTACAGCCGCTAGCACGCTGCTCACGGAACTCTTTAGTAACAAGGGCTGTGGCACCCTGTTTAAAAATGCTGAGCGGATGCTGCGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | TTCCGCAGGCCGCCTGAATTATTGAGGAAGATGATTTaGGTGGGCTGCAAAGCCTTGGCTAGAGATGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: FRRPPELLRKMI*VGCKALARDAV Trigger: GACTGCATCTCTAGCCAAGGCTTTGCAGCCCACCAAAATCATCTTCCTCAATAATTCAGGCGGCCTGCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | ATCCGCTCAGCATTTTTAAACAGGGTGCCACAGCCCTaGTTACTAAAGAGTTCCGTGAGCAGCGTGCTAGCG | + |
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Preference number: 6 (lower is better) Translates to: IRSAFLNRVPQP*LLKSSVSSVLA Trigger: CGCTAGCACGCTGCTCACGGAACTCTTTAGTAACAAGGGCTGTGGCACCCTGTTTAAAAATGCTGAGCGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS CAA 72 bp | TTATTGAGGAAGATGATTTTGGTGGGCTGCAAAGCCTaGGCTAGAGATGCAGTCACCTCCAGCGAGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LLRKMILVGCKA*ARDAVTSSESR Trigger: CCTTGACTCGCTGGAGGTGACTGCATCTCTAGCCAAGGCTTTGCAGCCCACCAAAATCATCTTCCTCAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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| CDS TCA 72 bp | GCTCAGGATCTTCTGACTGTTATTCCGCAGGCCGCCTaGATTATTGAGGAAGATGATTTTGGTGGGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: AQDLLTVIPQAA*IIEEDDFGGLQ Trigger: TTGCAGCCCACCAAAATCATCTTCCTCAATAATTCAGGCGGCCTGCGGAATAACAGTCAGAAGATCCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055409.6 |
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