Pregenerated sensors for NAGPA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023143Ensembl transcript IDs: ENSMUST00000023911.11, ENSMUST00000147567.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGCAGGTGCAGGCTCTCCAGAGCTCCTTATTGCTAGGTTGGCATaGGCCACAGCATGGGGACAGGAGGAATATGGCCAGCAAAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: EAGAGSPELLIARLA*ATAWGQEEYGQQRV Trigger: CACCCTTTGCTGGCCATATTCCTCCTGTCCCCATGCTGTGGCTCATGCCAACCTAGCAATAAGGAGCTCTGGAGAGCCTGCACCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR CCA 90 bp | TCTTGTCATGATGGGGTTACAGAGTTCCATTTGCTAGTGGCTTCCTaGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: SCHDGVTEFHLLVAS*ESLAVARPLCETGL Trigger: GAGGCCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGCAAATGGAACTCTGTAACCCCATCATGACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR TCA 90 bp | AGGTCTGTAAACAAGGCGACTTCCTTCCCTCCCCATCCCTTCTTATaGGGTGCTTCCTGTGACAGGATGCAGAGTTCTAGTTGGCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: RSVNKATSFPPHPFL*GASCDRMQSSSWLS Trigger: GGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAGCACCTCATAAGAAGGGATGGGGAGGGAAGGAAGTCGCCTTGTTTACAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR GCA 90 bp | CCTTCCCTCCCCATCCCTTCTTATGAGGTGCTTCCTGTGACAGGATaGAGAGTTCTAGTTGGCTGTCCAGCGATGAGGCTGTATAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: PSLPIPSYEVLPVTG*RVLVGCPAMRLYKR Trigger: CCTTTTATACAGCCTCATCGCTGGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAGCACCTCATAAGAAGGGATGGGGAGGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGTGTCCCCTGTGGAAGTaGGGAGCAGGGACAAGATTA | + |
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Preference number: 2 (lower is better) Translates to: GSLWQWRDPCARQASGQQCPLWK*GAGTRL Trigger: TAATCTTGTCCCTGCTCCTCACTTCCACAGGGGACA...CTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR CAA 90 bp | GATGGGGTTACAGAGTTCCATTTGCTAGTGGCTTCCTGGGAGTCTTaGGCAGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: DGVTEFHLLVASWES*AVARPLCETGLWAA Trigger: TGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGCAAATGGAACTCTGTAACCCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR CAA 90 bp | GCGGAGAGTGGCCACTCTTGTCATGATGGGGTTACAGAGTTCCATTaGCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AESGHSCHDGVTEFH*LVASWESLAVARPL Trigger: CAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGCAAATGGAACTCTGTAACCCCATCATGACAAGAGTGGCCACTCTCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTATAAAAGGCGAGTGCCGTGGCTGAGCCGAGGGTGTGTGTGTGTGTGTGTGATTGCTAGGTTGGCATaGGCCACAGCATGGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LYKRRVPWLSRGCVCVCVIARLA*ATAWGQ Trigger: CTGTCCCCATGCTGTGGCTCATGCCAACCTAGCAAT...CACACACACACACACACACCCTCGGCTCAGCCACGGCACTCGCCTTTTATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTGTGACAGGATGCAGAGTTCTAGTTGGCTGTCCAGCGATGAGGCTGTATTGTCCCCTGTGGAAGTaGGGAGCAGGGACAAGATTA | + |
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Preference number: 2 (lower is better) Translates to: LPVTGCRVLVGCPAMRLYCPLWK*GAGTRL Trigger: TAATCTTGTCCCTGCTCCTCACTTCCACAGGGGACA...ATACAGCCTCATCGCTGGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTTTCTATTTCATCCCTGTGCAGGCGGAGAGTGGCCACTCTTGTCATGATATTGCTAGGTTGGCATaGGCCACAGCATGGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: KAFYFIPVQAESGHSCHDIARLA*ATAWGQ Trigger: CTGTCCCCATGCTGTGGCTCATGCCAACCTAGCAAT...ATCATGACAAGAGTGGCCACTCTCCGCCTGCACAGGGATGAAATAGAAAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTGTGACAGGATGCAGAGTTCTAGTTGGCTGTCCAGCGATGAGGCTGTATAGGGACAAGATTATCTaGAGCATGCCGTTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LPVTGCRVLVGCPAMRLYRDKII*SMPLGQ Trigger: CTGCCCCAACGGCATGCTCCAGATAATCTTGTCCCT...ATACAGCCTCATCGCTGGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR-3UTR CCA 90 bp | GACAACAAAAATAGGTCTGTAAACAAGGCGACTTCCTTCCCTCCCCATCCCTTCAGGGACAAGATTATCTaGAGCATGCCGTTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DNKNRSVNKATSFPPHPFRDKII*SMPLGQ Trigger: CTGCCCCAACGGCATGCTCCAGATAATCTTGTCCCT...GAAGGGATGGGGAGGGAAGGAAGTCGCCTTGTTTACAGACCTATTTTTGTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR GCA 72 bp | TGGGGACAGGAGGAATATGGCCAGCAAAGGGTGGGGTaGATAGCATCCATGCCAGTGGCCTCACAATGTCCC | + |
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Preference number: 3 (lower is better) Translates to: WGQEEYGQQRVG*IASMPVASQCP Trigger: GGGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCATATTCCTCCTGTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR CCA 72 bp | GATGGGGTTACAGAGTTCCATTTGCTAGTGGCTTCCTaGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAG | + |
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Preference number: 3 (lower is better) Translates to: DGVTEFHLLVAS*ESLAVARPLCE Trigger: CTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGCAAATGGAACTCTGTAACCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR GCA 72 bp | GTGTGTGTGTGTGTAAGGCTTTCTATTTCATCCCTGTaGAGGCGGAGAGTGGCCACTCTTGTCATGATGGGG | + |
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Preference number: 3 (lower is better) Translates to: VCVCVRLSISSL*RRRVATLVMMG Trigger: CCCCATCATGACAAGAGTGGCCACTCTCCGCCTGCACAGGGATGAAATAGAAAGCCTTACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR TCA 90 bp | GCAGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGGTTCTGCAGTCCCCCTaGGCTGCTCACCAGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: AVARPLCETGLWAADIGEVLQSP*AAHQPP Trigger: GGGCGGCTGGTGAGCAGCTCAGGGGGACTGCAGAAC...CTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | GCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGTGGCGCCGGGGTTCGTaGGTGGCGGAGGCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ASGFLGVFGSGETPVRDRWRRGS*VAEASS Trigger: AGAGCTGGCCTCCGCCACCCACGAACCCCGGCGCCA...CCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
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| CDS-3UTR CCA 90 bp | GGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGGGGCCTCTGGCAACCTaGCCCATACCAGCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSLWQWRDPCARQASGQQGPLAT*PIPAQR Trigger: CCTCTGGGCTGGTATGGGCCAGGTTGCCAGAGGCCC...CTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR TCA 90 bp | GCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGGTTCTGCAGTCCCCCTaGGCTGCTCACCAGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ASGFLGVFGSGETPVRDRVLQSP*AAHQPP Trigger: GGGCGGCTGGTGAGCAGCTCAGGGGGACTGCAGAAC...CCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR TCA 90 bp | AGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGCGGCCAGGTGGTCCTGGTaGAAGAGGCCAGCTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SGETPVRDRPLGSRYRRAARWSW*KRPALL Trigger: CAGGAGAGCTGGCCTCTTTCACCAGGACCACCTGGC...CGCTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | GCAGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGCCGAACTGCGCGTTCTaGAGTCCCCCTGAGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: AVARPLCETGLWAADIGEPNCAF*SPPELL Trigger: GAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGG...CTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | GCAGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGTCCACACAGGTCCCATaGCCACTGCAGTCGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AVARPLCETGLWAADIGESTQVP*PLQSGG Trigger: GCCACCCGACTGCAGTGGCCATGGGACCTGTGTGGA...CTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | TGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCAGTGCGACACGAAGGTaGGCACGGCCGCGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: WPAKGGVHSIHASGLTMSSATRR*ARPRGG Trigger: GCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACT...GGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
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| CDS-3UTR GCA 90 bp | TGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCGCGCGCCCCTCGAAGTaGGACACGAAGGTGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: WPAKGGVHSIHASGLTMSARPSK*DTKVRT Trigger: CGTGCGCACCTTCGTGTCGCACTTCGAGGGGCGCGC...GGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
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| CDS-3UTR GCA 90 bp | GCAGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGTGGCAGCGCGGTTCATaGACACACACCACAGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: AVARPLCETGLWAADIGEWQRGS*THTTVD Trigger: GTCCACTGTGGTGTGTGTGCATGAACCGCGCTGCCA...CTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | GCAGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGCTGCAGTTGCCAGTCTaGGGGTCACAGGAACACTGG | + |
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Preference number: 4 (lower is better) Translates to: AVARPLCETGLWAADIGELQLPV*GSQEHW Trigger: CCAGTGTTCCTGTGACCCGCAGACTGGCAACTGCAG...CTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR TCA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACGCCAGGTGGTCCTGGTaGAAGAGGCCAGCTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SIHASGLTMSPVEVRSRDARWSW*KRPALL Trigger: CAGGAGAGCTGGCCTCTTTCACCAGGACCACCTGGC...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | GGGAGGCAGGTGCAGGCTCTCCAGAGCTCCTTATTGCTAGGTTGGCATGAGCCAGGCAGCCAGTCTCTGTaGACAGCCCATGCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GRQVQALQSSLLLGWHEPGSQSL*TAHAGC Trigger: GCAGCCAGCATGGGCTGTGCACAGAGACTGGCTGCC...TGGCTCATGCCAACCTAGCAATAAGGAGCTCTGGAGAGCCTGCACCTGCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | GCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGTCACAGGAACACTGGTaGTCACACTGGCAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ASGFLGVFGSGETPVRDRSQEHW*SHWQGL Trigger: GAGGCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGA...CCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | AGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGCGGTTGGCTGGAGACACTaGCTCACTTGGGAGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGETPVRDRPLGSRYRRAVGWRH*LTWEML Trigger: CAGCATCTCCCAAGTGAGGCAGTGTCTCCAGCCAAC...CGCTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | GTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCGGGCCTCTGGCAACCTaGCCCATACCAGCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VHSIHASGLTMSPVEVRSGPLAT*PIPAQR Trigger: CCTCTGGGCTGGTATGGGCCAGGTTGCCAGAGGCCC...GCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCTATGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| 3UTR CAA 72 bp | AGCGGGAGGCAGGTGCAGGCTCTCCAGAGCTCCTTATaGCTAGGTTGGCATGAGCCACAGCATGGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: SGRQVQALQSSL*LGWHEPQHGDR Trigger: CCTGTCCCCATGCTGTGGCTCATGCCAACCTAGCAATAAGGAGCTCTGGAGAGCCTGCACCTGCCTCCCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | TGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCGTCGGATACCGAACTaGGCGTTCTGCAGTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: WPAKGGVHSIHASGLTMSRRIPN*AFCSPP Trigger: AGGGGGACTGCAGAACGCGCAGTTCGGTATCCGACG...GGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACTCTGTGCACAGCCCATaGTGGCTGCAGTTGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SIHASGLTMSPVEVRSRDSVHSP*WLQLEG Trigger: CCCCTCCAACTGCAGCCAGCATGGGCTGTGCACAGA...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACACCACAGTGGACACTTaGCGGGGACAGCGCCACATG | + |
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Preference number: 4 (lower is better) Translates to: SIHASGLTMSPVEVRSRDTTVDT*RGQRHM Trigger: CATGTGGCGCTGTCCCCGCCAAGTGTCCACTGTGGT...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGTCGCCCCGCCAGAAGTaGCTGGTGCATTCACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: AKGGVHSIHASGLTMSPVSPRQK*LVHSQW Trigger: CCACTGTGAATGCACCAGCCACTTCTGGCGGGGCGA...CACAGGGGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGCAGGTGCAGGCTCTCCAGAGCTCCTTATTGCTAGGTTGGCATGAGCCATCGCCCCGCCAGAAGTaGCTGGTGCATTCACAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRQVQALQSSLLLGWHEPSPRQK*LVHSQW Trigger: CCACTGTGAATGCACCAGCCACTTCTGGCGGGGCGA...TGGCTCATGCCAACCTAGCAATAAGGAGCTCTGGAGAGCCTGCACCTGCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACCACTGGTGCTCACACTaGCAGGGCCTCTGGCAACCT | + |
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Preference number: 4 (lower is better) Translates to: SIHASGLTMSPVEVRSRDHWCSH*QGLWQP Trigger: AGGTTGCCAGAGGCCCTGCCAGTGTGAGCACCAGTG...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | TTGCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGGTCACAGGAACACTaGTGCTCACACTGGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLVASWESLAVARPLCETGSQEH*CSHWQG Trigger: GCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGACCC...TGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGCGGCGTAGCCTCAGTTaGCTGGAGACACTGCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: AKGGVHSIHASGLTMSPVRRSLS*LETLPH Trigger: GTGAGGCAGTGTCTCCAGCCAACTGAGGCTACGCCG...CACAGGGGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CCA 90 bp | TGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCGGCGTAGCCTCAGTTaGCTGGAGACACTGCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: WPAKGGVHSIHASGLTMSRRSLS*LETLPH Trigger: GTGAGGCAGTGTCTCCAGCCAACTGAGGCTACGCCG...GGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR TCA 90 bp | TTGCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGTCCTGGCAGTGATCTaGAGGGTAACTGGCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLVASWESLAVARPLCETVLAVI*RVTGQG Trigger: ACCCTGGCCAGTTACCCTTCAGATCACTGCCAGGAC...TGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR GCA 90 bp | GACAACAAAAATAGGTCTGTAAACAAGGCGACTTCCTTCCCTCCCCATCCCTTCGTAGCGCGGCGCTTCTaGGCGCAGCCCCCGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: DNKNRSVNKATSFPPHPFVARRF*AQPPAP Trigger: AGGAGCCGGGGGCTGCGCGCAGAAGCGCCGCGCTAC...GAAGGGATGGGGAGGGAAGGAAGTCGCCTTGTTTACAGACCTATTTTTGTTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
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| CDS-3UTR GCA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACCCAAGCACTCGCCAGTaGTCATGCGGAAGAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SIHASGLTMSPVEVRSRDPSTRQ*SCGRSH Trigger: GTGGCTTCTTCCGCATGAGCACTGGCGAGTGCTTGG...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
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| CDS-3UTR CCA 90 bp | GCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGCCCGCCAGAAGTGGCTaGTGCATTCACAGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AKGGVHSIHASGLTMSPVPARSG*CIHSGH Trigger: ATGGCCACTGTGAATGCACCAGCCACTTCTGGCGGG...CACAGGGGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | CATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACAACACTGGTGCTCACACTaGCAGGGCCTCTGGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: HPCQWPHNVPCGSEEQGQHWCSH*QGLWQP Trigger: AGGTTGCCAGAGGCCCTGCCAGTGTGAGCACCAGTG...TTGTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | CTGTATAAAAGGCGAGTGCCGTGGCTGAGCCGAGGGTGTGTGTGTGTGTGTGTGGGGTCACAGGAACACTaGTGCTCACACTGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYKRRVPWLSRGCVCVCVGSQEH*CSHWQG Trigger: GCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGACCC...CACACACACACACACACACCCTCGGCTCAGCCACGGCACTCGCCTTTTATACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | CTGTATAAAAGGCGAGTGCCGTGGCTGAGCCGAGGGTGTGTGTGTGTGTGTGTGGGTTCCTCTCGGCCCTaGAGCCCAGGAACAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LYKRRVPWLSRGCVCVCVGSSRP*SPGTRT Trigger: TGTCCTTGTTCCTGGGCTCCAGGGCCGAGAGGAACC...CACACACACACACACACACCCTCGGCTCAGCCACGGCACTCGCCTTTTATACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGCGCACGGCTGTCCTGGCTaGCATCACATTCACAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: SGETPVRDRPLGSRYRRAHGCPG*HHIHKF Trigger: AAATTTGTGAATGTGATGTCAGCCAGGACAGCCGTG...CGCTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | GTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCTGGCAGCGCGGTTCATaGACACACACCACAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VHSIHASGLTMSPVEVRSWQRGS*THTTVD Trigger: GTCCACTGTGGTGTGTGTGCATGAACCGCGCTGCCA...GCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCTATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | GTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCTCACAGGAACACTGGTaGTCACACTGGCAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHSIHASGLTMSPVEVRSSQEHW*SHWQGL Trigger: GAGGCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGA...GCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCTATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | GGAATATGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAGTTGGCTGGAGACACTaGCTCACTTGGGAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIWPAKGGVHSIHASGLTVGWRH*LTWEML Trigger: CAGCATCTCCCAAGTGAGGCAGTGTCTCCAGCCAAC...TGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCATATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | CTGTATAAAAGGCGAGTGCCGTGGCTGAGCCGAGGGTGTGTGTGTGTGTGTGTGCATGTGCTCCTTCTCTaGAGTCAGCGCTTCCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LYKRRVPWLSRGCVCVCVHVLLL*SQRFPV Trigger: AACGGGGAAGCGCTGACTGCAGAGAAGGAGCACATG...CACACACACACACACACACCCTCGGCTCAGCCACGGCACTCGCCTTTTATACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGTGACAGGATGCAGAGTTCTAGTTGGCTGTCCAGCGATGAGGCTGTATTCCACACAGGTCCCATaGCCACTGCAGTCGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVTGCRVLVGCPAMRLYSTQVP*PLQSGG Trigger: GCCACCCGACTGCAGTGGCCATGGGACCTGTGTGGA...ATACAGCCTCATCGCTGGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCAGGTGCAGGCTCTCCAGAGCTCCTTATTGCTAGGTTGGCATGAGCCAAGACACTGCCTCACTTaGGAGATGCTGCAGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRQVQALQSSLLLGWHEPRHCLT*EMLQLP Trigger: TGGCAACTGCAGCATCTCCCAAGTGAGGCAGTGTCT...TGGCTCATGCCAACCTAGCAATAAGGAGCTCTGGAGAGCCTGCACCTGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGGCAGGTGCAGGCTCTCCAGAGCTCCTTATTGCTAGGTTGGCATGAGCCAGTTCACCTCCTGCAGTaGGTGATACACATAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRQVQALQSSLLLGWHEPVHLLQ*VIHIVP Trigger: GGGGACTATGTGTATCACCCACTGCAGGAGGTGAAC...TGGCTCATGCCAACCTAGCAATAAGGAGCTCTGGAGAGCCTGCACCTGCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCGTTCACCTCCTGCAGTaGGTGATACACATAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WPAKGGVHSIHASGLTMSVHLLQ*VIHIVP Trigger: GGGGACTATGTGTATCACCCACTGCAGGAGGTGAAC...GGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | GACAACAAAAATAGGTCTGTAAACAAGGCGACTTCCTTCCCTCCCCATCCCTTCGGAGGCCAGCTCTCCTaGTCTGGGCTACCTGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DNKNRSVNKATSFPPHPFGGQLS*SGLPER Trigger: GCGCTCAGGTAGCCCAGAGCAGGAGAGCTGGCCTCC...GAAGGGATGGGGAGGGAAGGAAGTCGCCTTGTTTACAGACCTATTTTTGTTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGTGACAGGATGCAGAGTTCTAGTTGGCTGTCCAGCGATGAGGCTGTATCGTCGGATACCGAACTaGGCGTTCTGCAGTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVTGCRVLVGCPAMRLYRRIPN*AFCSPP Trigger: AGGGGGACTGCAGAACGCGCAGTTCGGTATCCGACG...ATACAGCCTCATCGCTGGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGTGACAGGATGCAGAGTTCTAGTTGGCTGTCCAGCGATGAGGCTGTATTCTGTGCACAGCCCATaGTGGCTGCAGTTGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVTGCRVLVGCPAMRLYSVHSP*WLQLEG Trigger: CCCCTCCAACTGCAGCCAGCATGGGCTGTGCACAGA...ATACAGCCTCATCGCTGGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | CATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACAAGAGGACACTCTTCACTaGAGTTGGATCCTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HPCQWPHNVPCGSEEQGQEDTLH*SWILST Trigger: GGTGGACAGGATCCAACTGCAGTGAAGAGTGTCCTC...TTGTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | CTGTATAAAAGGCGAGTGCCGTGGCTGAGCCGAGGGTGTGTGTGTGTGTGTGTGGTCTGTCCATCAGCATaGAAGAGGATAAGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYKRRVPWLSRGCVCVCVVCPSA*KRISCP Trigger: GGGGCAGCTTATCCTCTTCCATGCTGATGGACAGAC...CACACACACACACACACACCCTCGGCTCAGCCACGGCACTCGCCTTTTATACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | GACAACAAAAATAGGTCTGTAAACAAGGCGACTTCCTTCCCTCCCCATCCCTTCCCGAACTGCGCGTTCTaGAGTCCCCCTGAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DNKNRSVNKATSFPPHPFPNCAF*SPPELL Trigger: GAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGG...GAAGGGATGGGGAGGGAAGGAAGTCGCCTTGTTTACAGACCTATTTTTGTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | GTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCACTCTTCACTGCAGTTaGATCCTGTCCACCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHSIHASGLTMSPVEVRSTLHCS*ILSTQH Trigger: ATGCTGGGTGGACAGGATCCAACTGCAGTGAAGAGT...GCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCTATGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTCTATTTCATCCCTGTGCAGGCGGAGAGTGGCCACTCTTGTCATGATGGTTCCTCTCGGCCCTaGAGCCCAGGAACAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KAFYFIPVQAESGHSCHDGSSRP*SPGTRT Trigger: TGTCCTTGTTCCTGGGCTCCAGGGCCGAGAGGAACC...ATCATGACAAGAGTGGCCACTCTCCGCCTGCACAGGGATGAAATAGAAAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| 3UTR CAA 72 bp | GGCCACTCTTGTCATGATGGGGTTACAGAGTTCCATTaGCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GHSCHDGVTEFH*LVASWESLAVA Trigger: CGCCACTGCCAAAGACTCCCAGGAAGCCACTAGCAAATGGAACTCTGTAACCCCATCATGACAAGAGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR TCA 90 bp | CATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACAACACGGCTGTCCTGGCTaGCATCACATTCACAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: HPCQWPHNVPCGSEEQGQHGCPG*HHIHKF Trigger: AAATTTGTGAATGTGATGTCAGCCAGGACAGCCGTG...TTGTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTCTATTTCATCCCTGTGCAGGCGGAGAGTGGCCACTCTTGTCATGATCCCGCCAGAAGTGGCTaGTGCATTCACAGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAFYFIPVQAESGHSCHDPARSG*CIHSGH Trigger: ATGGCCACTGTGAATGCACCAGCCACTTCTGGCGGG...ATCATGACAAGAGTGGCCACTCTCCGCCTGCACAGGGATGAAATAGAAAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTTCTATTTCATCCCTGTGCAGGCGGAGAGTGGCCACTCTTGTCATGATCATGTGCTCCTTCTCTaGAGTCAGCGCTTCCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAFYFIPVQAESGHSCHDHVLLL*SQRFPV Trigger: AACGGGGAAGCGCTGACTGCAGAGAAGGAGCACATG...ATCATGACAAGAGTGGCCACTCTCCGCCTGCACAGGGATGAAATAGAAAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGTGACAGGATGCAGAGTTCTAGTTGGCTGTCCAGCGATGAGGCTGTATGACCCACGGCTGTCCTaGCTGACATCACATTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LPVTGCRVLVGCPAMRLYDPRLS*LTSHSQ Trigger: TTGTGAATGTGATGTCAGCCAGGACAGCCGTGGGTC...ATACAGCCTCATCGCTGGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGTGACAGGATGCAGAGTTCTAGTTGGCTGTCCAGCGATGAGGCTGTATAGACACTGCCTCACTTaGGAGATGCTGCAGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVTGCRVLVGCPAMRLYRHCLT*EMLQLP Trigger: TGGCAACTGCAGCATCTCCCAAGTGAGGCAGTGTCT...ATACAGCCTCATCGCTGGACAGCCAACTAGAACTCTGCATCCTGTCACAGGAAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTTCTATTTCATCCCTGTGCAGGCGGAGAGTGGCCACTCTTGTCATGATGAGGACACTCTTCACTaGAGTTGGATCCTGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KAFYFIPVQAESGHSCHDEDTLH*SWILST Trigger: GGTGGACAGGATCCAACTGCAGTGAAGAGTGTCCTC...ATCATGACAAGAGTGGCCACTCTCCGCCTGCACAGGGATGAAATAGAAAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | GACAACAAAAATAGGTCTGTAAACAAGGCGACTTCCTTCCCTCCCCATCCCTTCGACCCACGGCTGTCCTaGCTGACATCACATTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: DNKNRSVNKATSFPPHPFDPRLS*LTSHSQ Trigger: TTGTGAATGTGATGTCAGCCAGGACAGCCGTGGGTC...GAAGGGATGGGGAGGGAAGGAAGTCGCCTTGTTTACAGACCTATTTTTGTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CCA 90 bp | GACAACAAAAATAGGTCTGTAAACAAGGCGACTTCCTTCCCTCCCCATCCCTTCACTCTTCACTGCAGTTaGATCCTGTCCACCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DNKNRSVNKATSFPPHPFTLHCS*ILSTQH Trigger: ATGCTGGGTGGACAGGATCCAACTGCAGTGAAGAGT...GAAGGGATGGGGAGGGAAGGAAGTCGCCTTGTTTACAGACCTATTTTTGTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 90 bp | TCGGCGACCCGCGTCAGGTGGCCGGCCACCGCGCGCCCCTCGAAGTaGGACACGAAGGTGCGCACGGCCGCGTGGTGGCTGGCGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SATRVRWPATARPSK*DTKVRTAAWWLAPG Trigger: CCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGAGGGGCGCGCGGTGGCCGGCCACCTGACGCGGGTCGCCGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 90 bp | TCAGGTGGCCGGCCACCGCGCGCCCCTCGAAGTGCGACACGAAGGTaGGCACGGCCGCGTGGTGGCTGGCGCCGGGGTTCGTGGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SGGRPPRAPRSATRR*ARPRGGWRRGSWVA Trigger: CGCCACCCACGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGAGGGGCGCGCGGTGGCCGGCCACCTGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 90 bp | TCTGCGCGCAGCCCCCGGCTCCTCCGGGCTCCAGCACCGAGAAAGTaGGTAGGGGATCGGCGACCCGCGTCAGGTGGCCGGCCACCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SARSPRLLRAPAPRK*VGDRRPASGGRPPR Trigger: GCGCGGTGGCCGGCCACCTGACGCGGGTCGCCGATCCCCTACGCACTTTCTCGGTGCTGGAGCCCGGAGGAGCCGGGGGCTGCGCGCAGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS CCA 90 bp | GCGCGCCCCTCGAAGTGCGACACGAAGGTGCGCACGGCCGCGTGGTaGCTGGCGCCGGGGTTCGTGGGTGGCGGAGGCCAGCTCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARPSKCDTKVRTAAW*LAPGFVGGGGQLSC Trigger: GCAGGAGAGCTGGCCTCCGCCACCCACGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGAGGGGCGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS CCA 90 bp | ACCGCGCGCCCCTCGAAGTGCGACACGAAGGTGCGCACGGCCGCGTaGTGGCTGGCGCCGGGGTTCGTGGGTGGCGGAGGCCAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TARPSKCDTKVRTAA*WLAPGFVGGGGQLS Trigger: GGAGAGCTGGCCTCCGCCACCCACGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGAGGGGCGCGCGGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS CCA 90 bp | GCCCCTCGAAGTGCGACACGAAGGTGCGCACGGCCGCGTGGTGGCTaGCGCCGGGGTTCGTGGGTGGCGGAGGCCAGCTCTCCTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: APRSATRRCARPRGG*RRGSWVAEASSPAL Trigger: CAGAGCAGGAGAGCTGGCCTCCGCCACCCACGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGAGGGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 90 bp | CTGGGCTACCTGAGCGCACCCGGGCGCAGTCTCGCGAGGGACGTCTaGGCGCTAGTGGGTAAGGCAGCAGCAGGTCATCGTCGCGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGYLSAPGRSLARDV*ALVGKAAAGHRRGK Trigger: TTTCCCGCGACGATGACCTGCTGCTGCCTTACCCACTAGCGCGCAGACGTCCCTCGCGAGACTGCGCCCGGGTGCGCTCAGGTAGCCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 90 bp | GCCGCCCGTCGCTCACCACGTTCCCCAAGCACTCGCCAGTGCTCATaGGGAAGAAGCCACCGTTCTGAGCGATGCGGCAACCGGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AARRSPRSPSTRQCS*GRSHRSERCGNRPG Trigger: TCCCGGCCGGTTGCCGCATCGCTCAGAACGGTGGCTTCTTCCGCATGAGCACTGGCGAGTGCTTGGGGAACGTGGTGAGCGACGGGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 90 bp | CATCGCGTCGGATACCGAACTGCGCGTTCTGCAGTCCCCCTGAGCTaGTCACCAGCCGCCCGTCGCTCACCACGTTCCCCAAGCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HRVGYRTARSAVPLS*SPAARRSPRSPSTR Trigger: GCGAGTGCTTGGGGAACGTGGTGAGCGACGGGCGGCTGGTGAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGGTATCCGACGCGATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 90 bp | ACAGCCCATGCTGGCTGCAGTTGGAGGGGCCACAGTCCAGCTCGCTaGAGGCCTCGCCCCGCCAGAAGTGGCTGGTGCATTCACAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TAHAGCSWRGHSPAR*RPRPARSGWCIHSG Trigger: GCCACTGTGAATGCACCAGCCACTTCTGGCGGGGCGAGGCCTGCAGCGAGCTGGACTGTGGCCCCTCCAACTGCAGCCAGCATGGGCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 90 bp | GAGGGGCCACAGTCCAGCTCGCTGCAGGCCTCGCCCCGCCAGAAGTaGCTGGTGCATTCACAGTGGCCATCCACACAGGTCCCATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGPQSSSLQASPRQK*LVHSQWPSTQVPWP Trigger: TGGCCATGGGACCTGTGTGGATGGCCACTGTGAATGCACCAGCCACTTCTGGCGGGGCGAGGCCTGCAGCGAGCTGGACTGTGGCCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS TCA 90 bp | GGTTCCATCGCGTCGGATACCGAACTGCGCGTTCTGCAGTCCCCCTaGGCTGCTCACCAGCCGCCCGTCGCTCACCACGTTCCCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSIASDTELRVLQSP*AAHQPPVAHHVPQA Trigger: TGCTTGGGGAACGTGGTGAGCGACGGGCGGCTGGTGAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGGTATCCGACGCGATGGAACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 90 bp | TCACCAGCCGCCCGTCGCTCACCACGTTCCCCAAGCACTCGCCAGTaGTCATGCGGAAGAAGCCACCGTTCTGAGCGATGCGGCAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPAARRSPRSPSTRQ*SCGRSHRSERCGNR Trigger: CCGGTTGCCGCATCGCTCAGAACGGTGGCTTCTTCCGCATGAGCACTGGCGAGTGCTTGGGGAACGTGGTGAGCGACGGGCGGCTGGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 90 bp | CCGGTGACTATGGTTCCATCGCGTCGGATACCGAACTGCGCGTTCTaGAGTCCCCCTGAGCTGCTCACCAGCCGCCCGTCGCTCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: PVTMVPSRRIPNCAF*SPPELLTSRPSLTT Trigger: CGTGGTGAGCGACGGGCGGCTGGTGAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGGTATCCGACGCGATGGAACCATAGTCACCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 90 bp | CAGGTCCCATGGCCACTGCAGTCGGGTGGCTGGCAGCGCGGTTCATaGACACACACCACAGTGGACACTTGGCGGGGACAGCGCCACATG | + |
|
Preference number: 5 (lower is better) Translates to: QVPWPLQSGGWQRGS*THTTVDTWRGQRHM Trigger: CATGTGGCGCTGTCCCCGCCAAGTGTCCACTGTGGTGTGTGTGCATGAACCGCGCTGCCAGCCACCCGACTGCAGTGGCCATGGGACCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 90 bp | GTCCACCCAGCATCACAGTGGCAGCCAGTCTCTGTGCACAGCCCATaGTGGCTGCAGTTGGAGGGGCCACAGTCCAGCTCGCTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VHPASQWQPVSVHSP*WLQLEGPQSSSLQA Trigger: GGCCTGCAGCGAGCTGGACTGTGGCCCCTCCAACTGCAGCCAGCATGGGCTGTGCACAGAGACTGGCTGCCACTGTGATGCTGGGTGGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 90 bp | CACCCAGCATCACAGTGGCAGCCAGTCTCTGTGCACAGCCCATGCTaGCTGCAGTTGGAGGGGCCACAGTCCAGCTCGCTGCAGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HPASQWQPVSVHSPC*LQLEGPQSSSLQAS Trigger: CGAGGCCTGCAGCGAGCTGGACTGTGGCCCCTCCAACTGCAGCCAGCATGGGCTGTGCACAGAGACTGGCTGCCACTGTGATGCTGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 90 bp | GACAGGTACCCGGTGACTATGGTTCCATCGCGTCGGATACCGAACTaGGCGTTCTGCAGTCCCCCTGAGCTGCTCACCAGCCGCCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DRYPVTMVPSRRIPN*AFCSPPELLTSRPS Trigger: CGACGGGCGGCTGGTGAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGGTATCCGACGCGATGGAACCATAGTCACCGGGTACCTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS TCA 90 bp | TTCCCCAAGCACTCGCCAGTGCTCATGCGGAAGAAGCCACCGTTCTaGGCGATGCGGCAACCGGCCGGGACGGCTGTGTCCTCCACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FPKHSPVLMRKKPPF*AMRQPAGTAVSSTV Trigger: TACTGTGGAGGACACAGCCGTCCCGGCCGGTTGCCGCATCGCTCAGAACGGTGGCTTCTTCCGCATGAGCACTGGCGAGTGCTTGGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 90 bp | TGGGAGATGCTGCAGTTGCCAGTCTGCGGGTCACAGGAACACTGGTaGTCACACTGGCAGGGCCTCTGGCAACCTGGCCCATACCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WEMLQLPVCGSQEHW*SHWQGLWQPGPYQP Trigger: GGGCTGGTATGGGCCAGGTTGCCAGAGGCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGACCCGCAGACTGGCAACTGCAGCATCTCCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 90 bp | GGCTGGAGACACTGCCTCACTTGGGAGATGCTGCAGTTGCCAGTCTaGGGGTCACAGGAACACTGGTGCTCACACTGGCAGGGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWRHCLTWEMLQLPV*GSQEHWCSHWQGLW Trigger: CCAGAGGCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGACCCGCAGACTGGCAACTGCAGCATCTCCCAAGTGAGGCAGTGTCTCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 90 bp | TGCAGTCGGGTGGCTGGCAGCGCGGTTCATGCACACACACCACAGTaGACACTTGGCGGGGACAGCGCCACATGTTGTCCTGGCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CSRVAGSAVHAHTPQ*TLGGDSATCCPGSD Trigger: ATCACTGCCAGGACAACATGTGGCGCTGTCCCCGCCAAGTGTCCACTGTGGTGTGTGTGCATGAACCGCGCTGCCAGCCACCCGACTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 90 bp | CAGAAGTGGCTGGTGCATTCACAGTGGCCATCCACACAGGTCCCATaGCCACTGCAGTCGGGTGGCTGGCAGCGCGGTTCATGCACACAC | + |
|
Preference number: 5 (lower is better) Translates to: QKWLVHSQWPSTQVP*PLQSGGWQRGSCTH Trigger: GTGTGTGCATGAACCGCGCTGCCAGCCACCCGACTGCAGTGGCCATGGGACCTGTGTGGATGGCCACTGTGAATGCACCAGCCACTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 90 bp | GTGCTCCTTCTCTGCAGTCAGCGCTTCCCCGTTCACCTCCTGCAGTaGGTGATACACATAGTCCCCGTCGAGGTGCCGGTTCCTCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLLCSQRFPVHLLQ*VIHIVPVEVPVPLG Trigger: GCCGAGAGGAACCGGCACCTCGACGGGGACTATGTGTATCACCCACTGCAGGAGGTGAACGGGGAAGCGCTGACTGCAGAGAAGGAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 90 bp | ACTTGGGAGATGCTGCAGTTGCCAGTCTGCGGGTCACAGGAACACTaGTGCTCACACTGGCAGGGCCTCTGGCAACCTGGCCCATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TWEMLQLPVCGSQEH*CSHWQGLWQPGPYQ Trigger: CTGGTATGGGCCAGGTTGCCAGAGGCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGACCCGCAGACTGGCAACTGCAGCATCTCCCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 90 bp | CCTGGTGAAAGAGGCCAGCTCTCCTGCCCTCGGCGTAGCCTCAGTTaGCTGGAGACACTGCCTCACTTGGGAGATGCTGCAGTTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGERGQLSCPRRSLS*LETLPHLGDAAVAS Trigger: ACTGGCAACTGCAGCATCTCCCAAGTGAGGCAGTGTCTCCAGCCAACTGAGGCTACGCCGAGGGCAGGAGAGCTGGCCTCTTTCACCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 90 bp | CCTCAGTTGGCTGGAGACACTGCCTCACTTGGGAGATGCTGCAGTTaGCAGTCTGCGGGTCACAGGAACACTGGTGCTCACACTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQLAGDTASLGRCCS*QSAGHRNTGAHTGR Trigger: CCTGCCAGTGTGAGCACCAGTGTTCCTGTGACCCGCAGACTGGCAACTGCAGCATCTCCCAAGTGAGGCAGTGTCTCCAGCCAACTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGCGAGACCCCTGTGCGAGACAGGCCTCTGGGCAGCAGATATAGGCGAGCGGTCACACTCGATGGCTaGGCTCTCGTTGATGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SGETPVRDRPLGSRYRRAVTLDG*ALVDVD Trigger: ATCTACATCAACGAGAGCCAAGCCATCGAGTGTGAC...CGCTCGCCTATATCTGCTGCCCAGAGGCCTGTCTCGCACAGGGGTCTCGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGCAGTCCTTGAAGGGGTaGCTAGTTTCCTCCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASGFLGVFGSGETPVRDRQSLKG*LVSSMC Trigger: GCACATGGAGGAAACTAGCAACCCCTTCAAGGACTG...CCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACACCGCCTCCATCCAGGTaGATGGCATTGACGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LLVASWESLAVARPLCETPPPSR*MALTTS Trigger: AGATGTCGTCAATGCCATCAACCTGGATGGAGGCGG...TGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACCACTCTTCACTGCAGTaGGATCCTGTCCACCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SIHASGLTMSPVEVRSRDHSSLQ*DPVHPA Trigger: TGCTGGGTGGACAGGATCCAACTGCAGTGAAGAGTG...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCAGGAACAAGGACACGTaGACCCCAGTGCTGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WPAKGGVHSIHASGLTMSRNKDT*TPVLIS Trigger: GCTGATCAGCACTGGGGTCAACGTGTCCTTGTTCCT...GGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAATGTCCCTGGCCAGGGTCCCATaGAGCACAAAAGTAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WPAKGGVHSIHASGLTMSLARVP*STKVAE Trigger: TTCTGCTACTTTTGTGCTCAATGGGACCCTGGCCAG...GGACATTGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACCTGGCCAGGGTCCCATaGAGCACAAAAGTAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SIHASGLTMSPVEVRSRDLARVP*STKVAE Trigger: TTCTGCTACTTTTGTGCTCAATGGGACCCTGGCCAG...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | CATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACAACACTCTTCACTGCAGTaGGATCCTGTCCACCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HPCQWPHNVPCGSEEQGQHSSLQ*DPVHPA Trigger: TGCTGGGTGGACAGGATCCAACTGCAGTGAAGAGTG...TTGTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | GGAATATGGCCAGCAAAGGGTGGGGTGCATAGCATCCATGCCAGTGGCCTCACAAGGAACAAGGACACGTaGACCCCAGTGCTGATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GIWPAKGGVHSIHASGLTRNKDT*TPVLIS Trigger: GCTGATCAGCACTGGGGTCAACGTGTCCTTGTTCCT...TGTGAGGCCACTGGCATGGATGCTATGCACCCCACCCTTTGCTGGCCATATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACCAGTCCTTGAAGGGGTaGCTAGTTTCCTCCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SIHASGLTMSPVEVRSRDQSLKG*LVSSMC Trigger: GCACATGGAGGAAACTAGCAACCCCTTCAAGGACTG...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS TCA 90 bp | GCAGAACCGCCTCCATCCAGGTTGATGGCATTGACGACATCTTGTTaGCGCAGGAACTCTGCCATCTCCCATAGGTTAAGGCCACGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AEPPPSRLMALTTSC*RRNSAISHRLRPRC Trigger: ACAGCGTGGCCTTAACCTATGGGAGATGGCAGAGTTCCTGCGTCAACAAGATGTCGTCAATGCCATCAACCTGGATGGAGGCGGTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | CATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACAAGTCACACTCGATGGCTaGGCTCTCGTTGATGTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HPCQWPHNVPCGSEEQGQVTLDG*ALVDVD Trigger: ATCTACATCAACGAGAGCCAAGCCATCGAGTGTGAC...TTGTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS-3UTR CAA 90 bp | GCTAGTGGCTTCCTGGGAGTCTTTGGCAGTGGCGAGACCCCTGTGCGAGACAGGATCACATTCACAAATTaGCTAAAAGAACCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGFLGVFGSGETPVRDRITFTN*LKEPVS Trigger: GGAGACAGGTTCTTTTAGCAAATTTGTGAATGTGAT...CCTGTCTCGCACAGGGGTCTCGCCACTGCCAAAGACTCCCAGGAAGCCACTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS-3UTR CAA 90 bp | AGCATCCATGCCAGTGGCCTCACAATGTCCCCTGTGGAAGTGAGGAGCAGGGACATCACATTCACAAATTaGCTAAAAGAACCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIHASGLTMSPVEVRSRDITFTN*LKEPVS Trigger: GGAGACAGGTTCTTTTAGCAAATTTGTGAATGTGAT...GTCCCTGCTCCTCACTTCCACAGGGGACATTGTGAGGCCACTGGCATGGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 72 bp | CGGCCACCGCGCGCCCCTCGAAGTGCGACACGAAGGTaGGCACGGCCGCGTGGTGGCTGGCGCCGGGGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RPPRAPRSATRR*ARPRGGWRRGS Trigger: CGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGAGGGGCGCGCGGTGGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 72 bp | CGCGTCAGGTGGCCGGCCACCGCGCGCCCCTCGAAGTaGGACACGAAGGTGCGCACGGCCGCGTGGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVRWPATARPSK*DTKVRTAAWWL Trigger: CAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGAGGGGCGCGCGGTGGCCGGCCACCTGACGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS CCA 72 bp | TGCGCACGGCCGCGTGGTGGCTGGCGCCGGGGTTCGTaGGTGGCGGAGGCCAGCTCTCCTGCTCTGGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: CARPRGGWRRGS*VAEASSPALGY Trigger: GTAGCCCAGAGCAGGAGAGCTGGCCTCCGCCACCCACGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS CCA 72 bp | CCCTCGAAGTGCGACACGAAGGTGCGCACGGCCGCGTaGTGGCTGGCGCCGGGGTTCGTGGGTGGCGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSKCDTKVRTAA*WLAPGFVGGGG Trigger: GCCTCCGCCACCCACGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGAGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 72 bp | AGCCCCCGGCTCCTCCGGGCTCCAGCACCGAGAAAGTaGGTAGGGGATCGGCGACCCGCGTCAGGTGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPRLLRAPAPRK*VGDRRPASGGR Trigger: CCGGCCACCTGACGCGGGTCGCCGATCCCCTACGCACTTTCTCGGTGCTGGAGCCCGGAGGAGCCGGGGGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS CCA 72 bp | AGTGCGACACGAAGGTGCGCACGGCCGCGTGGTGGCTaGCGCCGGGGTTCGTGGGTGGCGGAGGCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SATRRCARPRGG*RRGSWVAEASS Trigger: AGAGCTGGCCTCCGCCACCCACGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS CCA 72 bp | TCGAAGTGCGACACGAAGGTGCGCACGGCCGCGTGGTaGCTGGCGCCGGGGTTCGTGGGTGGCGGAGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SKCDTKVRTAAW*LAPGFVGGGGQ Trigger: CTGGCCTCCGCCACCCACGAACCCCGGCGCCAGCCACCACGCGGCCGTGCGCACCTTCGTGTCGCACTTCGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS TCA 72 bp | GGGTGGCGGAGGCCAGCTCTCCTGCTCTGGGCTACCTaGGCGCACCCGGGCGCAGTCTCGCGAGGGACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GWRRPALLLWAT*AHPGAVSRGTS Trigger: AGACGTCCCTCGCGAGACTGCGCCCGGGTGCGCTCAGGTAGCCCAGAGCAGGAGAGCTGGCCTCCGCCACCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 72 bp | CTGAGCGCACCCGGGCGCAGTCTCGCGAGGGACGTCTaGGCGCTAGTGGGTAAGGCAGCAGCAGGTCATCGT | + |
|
Preference number: 6 (lower is better) Translates to: LSAPGRSLARDV*ALVGKAAAGHR Trigger: ACGATGACCTGCTGCTGCCTTACCCACTAGCGCGCAGACGTCCCTCGCGAGACTGCGCCCGGGTGCGCTCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS TCA 72 bp | CACTCGCCAGTGCTCATGCGGAAGAAGCCACCGTTCTaGGCGATGCGGCAACCGGCCGGGACGGCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HSPVLMRKKPPF*AMRQPAGTAVS Trigger: GGACACAGCCGTCCCGGCCGGTTGCCGCATCGCTCAGAACGGTGGCTTCTTCCGCATGAGCACTGGCGAGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS TCA 72 bp | GCGTCGGATACCGAACTGCGCGTTCTGCAGTCCCCCTaGGCTGCTCACCAGCCGCCCGTCGCTCACCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASDTELRVLQSP*AAHQPPVAHHV Trigger: AACGTGGTGAGCGACGGGCGGCTGGTGAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGGTATCCGACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 72 bp | GGATACCGAACTGCGCGTTCTGCAGTCCCCCTGAGCTaGTCACCAGCCGCCCGTCGCTCACCACGTTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GYRTARSAVPLS*SPAARRSPRSP Trigger: TGGGGAACGTGGTGAGCGACGGGCGGCTGGTGAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGGTATCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 72 bp | GCTCGCTGCAGGCCTCGCCCCGCCAGAAGTGGCTGGTaGATTCACAGTGGCCATCCACACAGGTCCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARCRPRPARSGW*IHSGHPHRSHG Trigger: GCCATGGGACCTGTGTGGATGGCCACTGTGAATGCACCAGCCACTTCTGGCGGGGCGAGGCCTGCAGCGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 72 bp | CAGTGCTCATGCGGAAGAAGCCACCGTTCTGAGCGATaGGGCAACCGGCCGGGACGGCTGTGTCCTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QCSCGRSHRSER*GNRPGRLCPPQ Trigger: CTGTGGAGGACACAGCCGTCCCGGCCGGTTGCCGCATCGCTCAGAACGGTGGCTTCTTCCGCATGAGCACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 72 bp | TGGCCACTGCAGTCGGGTGGCTGGCAGCGCGGTTCATaGACACACACCACAGTGGACACTTGGCGGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: WPLQSGGWQRGS*THTTVDTWRGQ Trigger: CTGTCCCCGCCAAGTGTCCACTGTGGTGTGTGTGCATGAACCGCGCTGCCAGCCACCCGACTGCAGTGGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 72 bp | CAGTCCAGCTCGCTGCAGGCCTCGCCCCGCCAGAAGTaGCTGGTGCATTCACAGTGGCCATCCACACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QSSSLQASPRQK*LVHSQWPSTQV Trigger: GACCTGTGTGGATGGCCACTGTGAATGCACCAGCCACTTCTGGCGGGGCGAGGCCTGCAGCGAGCTGGACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS GCA 72 bp | GCCCGTCGCTCACCACGTTCCCCAAGCACTCGCCAGTaGTCATGCGGAAGAAGCCACCGTTCTGAGCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ARRSPRSPSTRQ*SCGRSHRSERC Trigger: GCATCGCTCAGAACGGTGGCTTCTTCCGCATGAGCACTGGCGAGTGCTTGGGGAACGTGGTGAGCGACGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
||
| CDS GCA 72 bp | CTGCAGTTGCCAGTCTGCGGGTCACAGGAACACTGGTaGTCACACTGGCAGGGCCTCTGGCAACCTGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQLPVCGSQEHW*SHWQGLWQPGP Trigger: TGGGCCAGGTTGCCAGAGGCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGACCCGCAGACTGGCAACTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 72 bp | TCCACACAGGTCCCATGGCCACTGCAGTCGGGTGGCTaGCAGCGCGGTTCATGCACACACACCACAGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: STQVPWPLQSGG*QRGSCTHTTVD Trigger: GTCCACTGTGGTGTGTGTGCATGAACCGCGCTGCCAGCCACCCGACTGCAGTGGCCATGGGACCTGTGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
||
| CDS CCA 72 bp | CTGGTGCATTCACAGTGGCCATCCACACAGGTCCCATaGCCACTGCAGTCGGGTGGCTGGCAGCGCGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LVHSQWPSTQVP*PLQSGGWQRGS Trigger: TGAACCGCGCTGCCAGCCACCCGACTGCAGTGGCCATGGGACCTGTGTGGATGGCCACTGTGAATGCACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS CCA 72 bp | TCACAGTGGCAGCCAGTCTCTGTGCACAGCCCATGCTaGCTGCAGTTGGAGGGGCCACAGTCCAGCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SQWQPVSVHSPC*LQLEGPQSSSL Trigger: CAGCGAGCTGGACTGTGGCCCCTCCAACTGCAGCCAGCATGGGCTGTGCACAGAGACTGGCTGCCACTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS GCA 72 bp | CGCTCACCACGTTCCCCAAGCACTCGCCAGTGCTCATaGGGAAGAAGCCACCGTTCTGAGCGATGCGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: RSPRSPSTRQCS*GRSHRSERCGN Trigger: GTTGCCGCATCGCTCAGAACGGTGGCTTCTTCCGCATGAGCACTGGCGAGTGCTTGGGGAACGTGGTGAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023911.11 |
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| CDS GCA 72 bp | CCGGTGACTATGGTTCCATCGCGTCGGATACCGAACTaGGCGTTCTGCAGTCCCCCTGAGCTGCTCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: PVTMVPSRRIPN*AFCSPPELLTS Trigger: GCTGGTGAGCAGCTCAGGGGGACTGCAGAACGCGCAGTTCGGTATCCGACGCGATGGAACCATAGTCACCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS CCA 72 bp | GTGGCTGGCAGCGCGGTTCATGCACACACACCACAGTaGACACTTGGCGGGGACAGCGCCACATGTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VAGSAVHAHTPQ*TLGGDSATCCP Trigger: AGGACAACATGTGGCGCTGTCCCCGCCAAGTGTCCACTGTGGTGTGTGTGCATGAACCGCGCTGCCAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS CCA 72 bp | ATGCTGCAGTTGCCAGTCTGCGGGTCACAGGAACACTaGTGCTCACACTGGCAGGGCCTCTGGCAACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: MLQLPVCGSQEH*CSHWQGLWQPG Trigger: GCCAGGTTGCCAGAGGCCCTGCCAGTGTGAGCACCAGTGTTCCTGTGACCCGCAGACTGGCAACTGCAGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS GCA 72 bp | CCATTGCGGATGAGCCACACGACTCCGCTCAGCAGCTaGACGAACGGATTCACGGGATCCAGAACCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PLRMSHTTPLSS*TNGFTGSRTSS Trigger: GGAGGAGGTTCTGGATCCCGTGAATCCGTTCGTGCAGCTGCTGAGCGGAGTCGTGTGGCTCATCCGCAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS CAA 90 bp | GCCTCAGTTGGCTGGAGACACTGCCTCACTTGGGAGATGCTGCAGTaGCCAGTCTGCGGGTCACAGGAACACTGGTGCTCACACTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ASVGWRHCLTWEMLQ*PVCGSQEHWCSHWQ Trigger: CTGCCAGTGTGAGCACCAGTGTTCCTGTGACCCGCAGACTGGCAACTGCAGCATCTCCCAAGTGAGGCAGTGTCTCCAGCCAACTGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS TCA 72 bp | CGGGATCCAGAACCTCCTCCTCAGACAGGTACCCGGTaGCTATGGTTCCATCGCGTCGGATACCGAACTGCG | + |
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Preference number: 6 (lower is better) Translates to: RDPEPPPQTGTR*LWFHRVGYRTA Trigger: CGCAGTTCGGTATCCGACGCGATGGAACCATAGTCACCGGGTACCTGTCTGAGGAGGAGGTTCTGGATCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS CCA 72 bp | GCCCATACCAGCCCAGAGGACACTCTTCACTGCAGTTaGATCCTGTCCACCCAGCATCACAGTGGCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AHTSPEDTLHCS*ILSTQHHSGSQ Trigger: CTGGCTGCCACTGTGATGCTGGGTGGACAGGATCCAACTGCAGTGAAGAGTGTCCTCTGGGCTGGTATGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS CAA 72 bp | GGCCCATACCAGCCCAGAGGACACTCTTCACTGCAGTaGGATCCTGTCCACCCAGCATCACAGTGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GPYQPRGHSSLQ*DPVHPASQWQP Trigger: TGGCTGCCACTGTGATGCTGGGTGGACAGGATCCAACTGCAGTGAAGAGTGTCCTCTGGGCTGGTATGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS CAA 90 bp | AGGTGCCGGTTCCTCTCGGCCCTGGAGCCCAGGAACAAGGACACGTaGACCCCAGTGCTGATCAGCAGCAGGAAAATTAGTGTCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RCRFLSALEPRNKDT*TPVLISSRKISVRV Trigger: CACCCTGACACTAATTTTCCTGCTGCTGATCAGCACTGGGGTCAACGTGTCCTTGTTCCTGGGCTCCAGGGCCGAGAGGAACCGGCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS TCA 72 bp | TCAGCATGGAAGAGGATAAGCTGCCCCTCACGGTCATaGCCCACGGCTGTCCTGGCTGACATCACATTCACA | + |
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Preference number: 6 (lower is better) Translates to: SAWKRISCPSRS*PTAVLADITFT Trigger: TGTGAATGTGATGTCAGCCAGGACAGCCGTGGGTCATGACCGTGAGGGGCAGCTTATCCTCTTCCATGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS TCA 72 bp | CCTCCATCCAGGTTGATGGCATTGACGACATCTTGTTaGCGCAGGAACTCTGCCATCTCCCATAGGTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: PPSRLMALTTSC*RRNSAISHRLR Trigger: CCTTAACCTATGGGAGATGGCAGAGTTCCTGCGTCAACAAGATGTCGTCAATGCCATCAACCTGGATGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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| CDS CAA 72 bp | AGAACCTGTCTCCTGTGTCTCGTCACACTCGATGGCTaGGCTCTCGTTGATGTAGATGTTTCCATTGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: RTCLLCLVTLDG*ALVDVDVSIAD Trigger: ATCCGCAATGGAAACATCTACATCAACGAGAGCCAAGCCATCGAGTGTGACGAGACACAGGAGACAGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023911.11 ENSMUST00000147567.2 |
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