Pregenerated sensors for NAGK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034744Ensembl transcript IDs: ENSMUST00000037376.14, ENSMUST00000113850.2, ENSMUST00000113851.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATCAGCTGCCAACTGGATGTAGAAATTATGGAGAACCCTGCCTCTaGGCCAGAGTTTTTCCTGGAAGGATTACCTCCAGAGGAAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: NQLPTGCRNYGEPCL*ARVFPGRITSRGKA Trigger: GGCCTTTCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGCCCAGAGGCAGGGTTCTCCATAATTTCTACATCCAGTTGGCAGCTGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR GCA 90 bp | CTGCTTAATCAGCTGCCAACTGGATGTAGAAATTATGGAGAACCCTaGCTCTGGGCCAGAGTTTTTCCTGGAAGGATTACCTCCAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: LLNQLPTGCRNYGEP*LWARVFPGRITSRG Trigger: TCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGCCCAGAGGCAGGGTTCTCCATAATTTCTACATCCAGTTGGCAGCTGATTAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR TCA 90 bp | TTGCTGTATAAATCAAATGTCAGCTGTTTTAAAACTCATACTTGCTaGGATGGCACCTTCCTGGCTATGCCTTATGGACACATGTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: LLYKSNVSCFKTHTC*DGTFLAMPYGHMCC Trigger: ACAGCACATGTGTCCATAAGGCATAGCCAGGAAGGTGCCATCTCAGCAAGTATGAGTTTTAAAACAGCTGACATTTGATTTATACAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR GCA 90 bp | GAGAAAACAAACCCAGAGGTTAATAGCATTGTTGCACATCATACCTaGTTAATCAGCTGCCAACTGGATGTAGAAATTATGGAGAACCCT | + |
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Preference number: 1 (lower is better) Translates to: EKTNPEVNSIVAHHT*LISCQLDVEIMENP Trigger: AGGGTTCTCCATAATTTCTACATCCAGTTGGCAGCTGATTAAGCAGGTATGATGTGCAACAATGCTATTAACCTCTGGGTTTGTTTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGAGTTTTTCCTGGAAGGATTACCTCCAGAGGAAAGGCCCTCCCCACTAGGCCAAAGCATATAGTGTaGAAATGGGAAGGTCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ARVFPGRITSRGKALPTRPKHIV*KWEGLG Trigger: GCCCAGACCTTCCCATTTCCACACTATATGCTTTGG...CCTAGTGGGGAGGGCCTTTCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGCTGCCAACTGGATGTAGAAATTATGGAGAACCCTGCCTCTGGGCCAGAGCTGTCTCCCAGAGCTTaGGAGACAATAGACCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: ISCQLDVEIMENPASGPELSPRA*ETIDLG Trigger: CCCAAGGTCTATTGTCTCCCAAGCTCTGGGAGACAG...CTCTGGCCCAGAGGCAGGGTTCTCCATAATTTCTACATCCAGTTGGCAGCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR-3UTR TCA 90 bp | AAACTCATACTTGCTGAGATGGCACCTTCCTGGCTATGCCTTATGGACACATGTATAACCAGAGCCGGGTaGGCAGCAGTCAGAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KLILAEMAPSWLCLMDTCITRAG*AAVRSR Trigger: CCTGCTTCTGACTGCTGCTCACCCGGCTCTGGTTAT...ACATGTGTCCATAAGGCATAGCCAGGAAGGTGCCATCTCAGCAAGTATGAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCCCTCAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACGGAAATGGGAAGGTCTaGGCTCTTATATGCCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: LGPQGIHAHMRKKNCPVYGNGKV*ALICLR Trigger: TCTTAGGCATATAAGAGCCCAGACCTTCCCATTTCC...GTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTGAGGGCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCCCTCAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACCATATAGTGTGGAAATaGGAAGGTCTGGGCTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: LGPQGIHAHMRKKNCPVYHIVWK*EGLGSY Trigger: ATAAGAGCCCAGACCTTCCCATTTCCACACTATATG...GTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTGAGGGCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR-3UTR GCA 90 bp | AAACTCATACTTGCTGAGATGGCACCTTCCTGGCTATGCCTTATGGACACATGTAATTATGGAGAACCCTaGCTCTGGGCCAGAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: KLILAEMAPSWLCLMDTCNYGEP*LWARVF Trigger: AAAAACTCTGGCCCAGAGGCAGGGTTCTCCATAATT...ACATGTGTCCATAAGGCATAGCCAGGAAGGTGCCATCTCAGCAAGTATGAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR-3UTR TCA 90 bp | CGGAGAGCGAGAAAACAAACCCAGAGGTTAATAGCATTGTTGCACATCATACCTGGATTCATGCACACATaGGAAAGAAAAACTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RRARKQTQRLIALLHIIPGFMHT*ERKTAL Trigger: CAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCC...AGGTATGATGTGCAACAATGCTATTAACCTCTGGGTTTGTTTTCTCGCTCTCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR-3UTR TCA 90 bp | CGGAGAGCGAGAAAACAAACCCAGAGGTTAATAGCATTGTTGCACATCATACCTCCAGATATAAAGGTCTaGGAGAAAGGTCTCTTACTA | + |
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Preference number: 2 (lower is better) Translates to: RRARKQTQRLIALLHIIPPDIKV*EKGLLL Trigger: TAGTAAGAGACCTTTCTCTCAGACCTTTATATCTGG...AGGTATGATGTGCAACAATGCTATTAACCTCTGGGTTTGTTTTCTCGCTCTCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR CCA 72 bp | TTATGGAGAACCCTGCCTCTGGGCCAGAGTTTTTCCTaGAAGGATTACCTCCAGAGGAAAGGCCCTCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LWRTLPLGQSFS*KDYLQRKGPPH Trigger: GTGGGGAGGGCCTTTCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGCCCAGAGGCAGGGTTCTCCATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR GCA 72 bp | GATGGCACCTTCCTGGCTATGCCTTATGGACACATGTaGTGTTCAGGAGTCGGAGAGCGAGAAAACAAACCC | + |
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Preference number: 3 (lower is better) Translates to: DGTFLAMPYGHM*CSGVGERENKP Trigger: GGGTTTGTTTTCTCGCTCTCCGACTCCTGAACAGCACATGTGTCCATAAGGCATAGCCAGGAAGGTGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR CCA 72 bp | TACTTGCTGAGATGGCACCTTCCTGGCTATGCCTTATaGACACATGTGCTGTTCAGGAGTCGGAGAGCGAGA | + |
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Preference number: 3 (lower is better) Translates to: YLLRWHLPGYAL*THVLFRSRRAR Trigger: TCTCGCTCTCCGACTCCTGAACAGCACATGTGTCCATAAGGCATAGCCAGGAAGGTGCCATCTCAGCAAGTA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR CCA 72 bp | CCCAGCTTCTGGCAGCCAAAGCATATAGTGTGGAAATaGGAAGGTCTGGGCTCTTATATGCCTAAGAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PSFWQPKHIVWK*EGLGSYMPKSL Trigger: CAGGCTCTTAGGCATATAAGAGCCCAGACCTTCCCATTTCCACACTATATGCTTTGGCTGCCAGAAGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR CCA 72 bp | TGTACTGTCTCCCAGAGCTTGGGAGACAATAGACCTTaGGTCATTCCCCAGGAGGTAGGCTTAGACACACTT | + |
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Preference number: 3 (lower is better) Translates to: CTVSQSLGDNRP*VIPQEVGLDTL Trigger: AAGTGTGTCTAAGCCTACCTCCTGGGGAATGACCCAAGGTCTATTGTCTCCCAAGCTCTGGGAGACAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR GCA 72 bp | CAGCTGCCAACTGGATGTAGAAATTATGGAGAACCCTaGCTCTGGGCCAGAGTTTTTCCTGGAAGGATTACC | + |
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Preference number: 3 (lower is better) Translates to: QLPTGCRNYGEP*LWARVFPGRIT Trigger: GGTAATCCTTCCAGGAAAAACTCTGGCCCAGAGGCAGGGTTCTCCATAATTTCTACATCCAGTTGGCAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR GCA 72 bp | AAACTCATACTTGCTGAGATGGCACCTTCCTGGCTATaGCTTATGGACACATGTGCTGTTCAGGAGTCGGAG | + |
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Preference number: 3 (lower is better) Translates to: KLILAEMAPSWL*LMDTCAVQESE Trigger: CTCCGACTCCTGAACAGCACATGTGTCCATAAGGCATAGCCAGGAAGGTGCCATCTCAGCAAGTATGAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR CCA 72 bp | TTGGGTCCCAGCTTCTGGCAGCCAAAGCATATAGTGTaGAAATGGGAAGGTCTGGGCTCTTATATGCCTAAG | + |
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Preference number: 3 (lower is better) Translates to: LGPSFWQPKHIV*KWEGLGSYMPK Trigger: CTTAGGCATATAAGAGCCCAGACCTTCCCATTTCCACACTATATGCTTTGGCTGCCAGAAGCTGGGACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR CCA 72 bp | AAAATTGAGACTAGGATTGTACTGTCTCCCAGAGCTTaGGAGACAATAGACCTTGGGTCATTCCCCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KIETRIVLSPRA*ETIDLGSFPRR Trigger: CCTCCTGGGGAATGACCCAAGGTCTATTGTCTCCCAAGCTCTGGGAGACAGTACAATCCTAGTCTCAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR CCA 72 bp | CCAACTGGATGTAGAAATTATGGAGAACCCTGCCTCTaGGCCAGAGTTTTTCCTGGAAGGATTACCTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: PTGCRNYGEPCL*ARVFPGRITSR Trigger: TCTGGAGGTAATCCTTCCAGGAAAAACTCTGGCCCAGAGGCAGGGTTCTCCATAATTTCTACATCCAGTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR CCA 72 bp | GTTTTAAAACTCATACTTGCTGAGATGGCACCTTCCTaGCTATGCCTTATGGACACATGTGCTGTTCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: VLKLILAEMAPS*LCLMDTCAVQE Trigger: CTCCTGAACAGCACATGTGTCCATAAGGCATAGCCAGGAAGGTGCCATCTCAGCAAGTATGAGTTTTAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR GCA 72 bp | AATAGCATTGTTGCACATCATACCTGCTTAATCAGCTaGCAACTGGATGTAGAAATTATGGAGAACCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: NSIVAHHTCLIS*QLDVEIMENPA Trigger: GGCAGGGTTCTCCATAATTTCTACATCCAGTTGGCAGCTGATTAAGCAGGTATGATGTGCAACAATGCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| 3UTR GCA 72 bp | AACCCAGAGGTTAATAGCATTGTTGCACATCATACCTaGTTAATCAGCTGCCAACTGGATGTAGAAATTATG | + |
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Preference number: 3 (lower is better) Translates to: NPEVNSIVAHHT*LISCQLDVEIM Trigger: CATAATTTCTACATCCAGTTGGCAGCTGATTAAGCAGGTATGATGTGCAACAATGCTATTAACCTCTGGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACGGTATCCAATGTGCCTaGCCCCCAGGCTGGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDGIQCA*PPGWHP Trigger: GGGGTGCCAGCCTGGGGGCCAGGCACATTGGATACC...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACGGACTTTGGACCGTGTaGCTCCCCCTTCCACGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDGLWTV*LPLPRH Trigger: GTGGCGTGGAAGGGGGAGGCACACGGTCCAAAGTCC...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000037376.14 |
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| CDS-3UTR GCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACGAGTTCTGTGCCTGCTaGTCTCGGCCCAGCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDEFCAC*SRPSVS Trigger: GCTGACGCTGGGCCGAGAGCAGCAGGCACAGAACTC...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACGGACTTTGGACCGTGTaGCTCCCCGTTGCCACCGCT | + |
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Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDGLWTV*LPVATA Trigger: AGCGGTGGCAACGGGGAGGCACACGGTCCAAAGTCC...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113851.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTTCCCACCGTCCGGTGTaGCTGTGGCGATGGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTSHRPV*LWRWNL Trigger: CAGGTTCCATCGCCACAGCCACACCGGACGGTGGGA...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR GCA 90 bp | GGGTCCCAGCTTCTGGCAGCCAAAGCATATAGTGTGGAAATGGGAAGGTCTGGGGGACTTTGGACCGTGTaGCTCCCCCTTCCACGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GSQLLAAKAYSVEMGRSGGLWTV*LPLPRH Trigger: GTGGCGTGGAAGGGGGAGGCACACGGTCCAAAGTCC...CCCAGACCTTCCCATTTCCACACTATATGCTTTGGCTGCCAGAAGCTGGGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR GCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTCTCACTGCATCCTCCTaGTCCCCACCACTCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTLTASS*SPPLRD Trigger: GTCCCTGAGTGGTGGGGAGCAGGAGGATGCAGTGAG...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR GCA 90 bp | GGGTCCCAGCTTCTGGCAGCCAAAGCATATAGTGTGGAAATGGGAAGGTCTGGGGAGTTCTGTGCCTGCTaGTCTCGGCCCAGCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: GSQLLAAKAYSVEMGRSGEFCAC*SRPSVS Trigger: GCTGACGCTGGGCCGAGAGCAGCAGGCACAGAACTC...CCCAGACCTTCCCATTTCCACACTATATGCTTTGGCTGCCAGAAGCTGGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACCGTCCGGTGTGGCTGTaGCGATGGAACCTGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDRPVWL*RWNLLH Trigger: ATGCAGCAGGTTCCATCGCCACAGCCACACCGGACG...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGGTATCCAATGTGCCTaGCCCCCAGGCTGGCACCCC | + |
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Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTGIQCA*PPGWHP Trigger: GGGGTGCCAGCCTGGGGGCCAGGCACATTGGATACC...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR TCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACAGCCTGTTCCAGAGATaGGCACAATCCCACCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDSLFQR*AQSHRP Trigger: CGGACGGTGGGATTGTGCTCATCTCTGGAACAGGCT...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR TCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTCCAGCTCTTCCACACTaGGCCCACACACAGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTPALPH*AHTQNG Trigger: CCCATTCTGTGTGTGGGCTCAGTGTGGAAGAGCTGG...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR GCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGCTCACTGCATCCTCCTaGTCCCCACCACTCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQLTASS*SPPLRD Trigger: GTCCCTGAGTGGTGGGGAGCAGGAGGATGCAGTGAG...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR GCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGAGTTCTGTGCCTGCTaGTCTCGGCCCAGCGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTEFCAC*SRPSVS Trigger: GCTGACGCTGGGCCGAGAGCAGCAGGCACAGAACTC...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CCA 90 bp | GGGCCAGAGTTTTTCCTGGAAGGATTACCTCCAGAGGAAAGGCCCTCCCCACTAGTGTGGCTGTGGCGATaGAACCTGCTGCATCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GPEFFLEGLPPEERPSPLVWLWR*NLLHPW Trigger: CCACGGATGCAGCAGGTTCCATCGCCACAGCCACAC...TAGTGGGGAGGGCCTTTCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGGTGTGGCTGTGGCGATaGAACCTGCTGCATCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQVWLWR*NLLHPW Trigger: CCACGGATGCAGCAGGTTCCATCGCCACAGCCACAC...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CCA 90 bp | GGGCCAGAGTTTTTCCTGGAAGGATTACCTCCAGAGGAAAGGCCCTCCCCACTACGTCCGGTGTGGCTGTaGCGATGGAACCTGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: GPEFFLEGLPPEERPSPLRPVWL*RWNLLH Trigger: ATGCAGCAGGTTCCATCGCCACAGCCACACCGGACG...TAGTGGGGAGGGCCTTTCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACATCCCACCGTCCGGTGTaGCTGTGGCGATGGAACCTG | + |
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Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTSHRPV*LWRWNL Trigger: CAGGTTCCATCGCCACAGCCACACCGGACGGTGGGA...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGTCGTCTCCCATCATGTaGCCCCAGCCTCCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQSSPIM*PQPPQP Trigger: TGGCTGTGGAGGCTGGGGCCACATGATGGGAGACGA...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CCA 90 bp | AGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCTAGGGAAGCCCAGCTCTCGGTGTTaGCTGGTTGGGCAGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RCQGHAQQCMEDDTLLGKPSSRC*LVGQGD Trigger: GTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGG...CTTCCCTAGCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR TCA 90 bp | GGGTCCCAGCTTCTGGCAGCCAAAGCATATAGTGTGGAAATGGGAAGGTCTGGGCCAGCTCTTCCACACTaGGCCCACACACAGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: GSQLLAAKAYSVEMGRSGPALPH*AHTQNG Trigger: CCCATTCTGTGTGTGGGCTCAGTGTGGAAGAGCTGG...CCCAGACCTTCCCATTTCCACACTATATGCTTTGGCTGCCAGAAGCTGGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR GCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACCAGTCCATCTGCTTCTaGCAGGATCTGCCCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDQSICF*QDLPIL Trigger: GAGGATGGGCAGATCCTGGCAGAAGCAGATGGACTG...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTTGTGCTCAGTCCATCTaGTTCTGCCAGGATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTCAQSI*FCQDLP Trigger: GGGCAGATCCTGGCAGAAGCAGATGGACTGAGCACA...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTCTGCCACAACATGTCTaGCCAGCATCTCTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTLPQHV*PASLQP Trigger: AGGCTGGAGAGATGCTGGGCAGACATGTTGTGGCAG...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGTGTGGCTGTGGCGATaGAACCTGCTGCATCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTVWLWR*NLLHPW Trigger: CCACGGATGCAGCAGGTTCCATCGCCACAGCCACAC...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCTAGGGAAGTCCCACCGTCCGGTGTaGCTGTGGCGATGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCQGHAQQCMEDDTLLGKSHRPV*LWRWNL Trigger: CAGGTTCCATCGCCACAGCCACACCGGACGGTGGGA...CTTCCCTAGCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACATCGTCTCCCATCATGTaGCCCCAGCCTCCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTSSPIM*PQPPQP Trigger: TGGCTGTGGAGGCTGGGGCCACATGATGGGAGACGA...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAAGCCTGTTCCAGAGATaGGCACAATCCCACCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTSLFQR*AQSHRP Trigger: CGGACGGTGGGATTGTGCTCATCTCTGGAACAGGCT...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGTGCAATCCAGTAGGCTaGGCCCTCGTCTCCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQCNPVG*ALVSHH Trigger: ATGATGGGAGACGAGGGCTCAGCCTACTGGATTGCA...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACACATGGCCAATATCATaGGGAGCTGCCTCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDTWPIS*GAASRL Trigger: CAACCTGGAGGCAGCTCCTCATGATATTGGCCATGT...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGTGTGCTCAGTCCATCTaGTTCTGCCAGGATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQCAQSI*FCQDLP Trigger: GGGCAGATCCTGGCAGAAGCAGATGGACTGAGCACA...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACAGGTTGGGAAAGCGGTaGCTCAACTCCTCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDRLGKR*LNSSIR Trigger: CCTGATTGAGGAGTTGAGGCACCGCTTTCCCAACCT...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTAGGCCAAGCTCCCCTTaGAACAAAACCGGGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTRPSSP*NKTGSI Trigger: GATTGACCCGGTTTTGTTCCAAGGGGAGCTTGGCCT...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTTGTCCACCATCTCATTaGTCCTCTCCACACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTCPPSH*SSPHTG Trigger: ACCAGTGTGTGGAGAGGATCAATGAGATGGTGGACA...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCTAGGGAAGAGCCTGTTCCAGAGATaGGCACAATCCCACCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RCQGHAQQCMEDDTLLGKSLFQR*AQSHRP Trigger: CGGACGGTGGGATTGTGCTCATCTCTGGAACAGGCT...CTTCCCTAGCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACATGCAATCCAGTAGGCTaGGCCCTCGTCTCCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTCNPVG*ALVSHH Trigger: ATGATGGGAGACGAGGGCTCAGCCTACTGGATTGCA...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACCGAACATGGCCTGCTTaGCATGGCCAATATCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDRTWPA*HGQYHE Trigger: CTCATGATATTGGCCATGTCAAGCAGGCCATGTTCG...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTCGAACATGGCCTGCTTaGCATGGCCAATATCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTRTWPA*HGQYHE Trigger: CTCATGATATTGGCCATGTCAAGCAGGCCATGTTCG...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACGAAAGAGGGTCTCCCTaGTGTGCACCTTCTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDERGSP*CAPSAI Trigger: AATTGCAGAAGGTGCACATCAGGGAGACCCTCTTTC...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTGAAAGAGGGTCTCCCTaGTGTGCACCTTCTGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTERGSP*CAPSAI Trigger: AATTGCAGAAGGTGCACATCAGGGAGACCCTCTTTC...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCCTCAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACCTCACTGCATCCTCCTaGTCCCCACCACTCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGPQGIHAHMRKKNCPVYLTASS*SPPLRD Trigger: GTCCCTGAGTGGTGGGGAGCAGGAGGATGCAGTGAG...GTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTGAGGGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGAGGTTGGGAAAGCGGTaGCTCAACTCCTCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQRLGKR*LNSSIR Trigger: CCTGATTGAGGAGTTGAGGCACCGCTTTCCCAACCT...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACACTGCCACAACATGTCTaGCCAGCATCTCTCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTLPQHV*PASLQP Trigger: AGGCTGGAGAGATGCTGGGCAGACATGTTGTGGCAG...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTGTGCCAATCAGCCAGTaGTTTGTGCTCAGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTVPISQ*FVLSPS Trigger: AGATGGACTGAGCACAAACCACTGGCTGATTGGCAC...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGCTCCAGCCTTCTGTTTaGCCCTGTCCACCATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQLQPSV*PCPPSH Trigger: ATGAGATGGTGGACAGGGCCAAACAGAAGGCTGGAG...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCCCTCAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACTCGTCTCCCATCATGTaGCCCCAGCCTCCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGPQGIHAHMRKKNCPVYSSPIM*PQPPQP Trigger: TGGCTGTGGAGGCTGGGGCCACATGATGGGAGACGA...GTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTGAGGGCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCTAGGGAAGTGCAATCCAGTAGGCTaGGCCCTCGTCTCCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCQGHAQQCMEDDTLLGKCNPVG*ALVSHH Trigger: ATGATGGGAGACGAGGGCTCAGCCTACTGGATTGCA...CTTCCCTAGCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACGCTTCTGCCAGGATCTaGCCATCCTCAGAAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDASARI*PSSESK Trigger: TTTACTTTCTGAGGATGGGCAGATCCTGGCAGAAGC...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTAGGGTCTCCCTGATGTaGACCTTCTGCAATTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTRVSLM*TFCNFL Trigger: CAGAAAATTGCAGAAGGTGCACATCAGGGAGACCCT...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGGTGCCAATCAGCCAGTaGTTTGTGCTCAGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQVPISQ*FVLSPS Trigger: AGATGGACTGAGCACAAACCACTGGCTGATTGGCAC...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAATCCTCTCCACACACTaGTCTGTGCCAATCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTILSTH*SVPISQ Trigger: CTGGCTGATTGGCACAGACCAGTGTGTGGAGAGGAT...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACACTCCAGCCTTCTGTTTaGCCCTGTCCACCATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTLQPSV*PCPPSH Trigger: ATGAGATGGTGGACAGGGCCAAACAGAAGGCTGGAG...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTAGTTTTCACTCAGGTTaGGAAAGCGGTGCCTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTSFHSG*ESGAST Trigger: AGTTGAGGCACCGCTTTCCCAACCTGAGTGAAAACT...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAAGGCCAAGCTCCCCTTaGAACAAAACCGGGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTRPSSP*NKTGSI Trigger: GATTGACCCGGTTTTGTTCCAAGGGGAGCTTGGCCT...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGGCTTCTGCCAGGATCTaGCCATCCTCAGAAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQASARI*PSSESK Trigger: TTTACTTTCTGAGGATGGGCAGATCCTGGCAGAAGC...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCCTCAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACTGTGCTCAGTCCATCTaGTTCTGCCAGGATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPQGIHAHMRKKNCPVYCAQSI*FCQDLP Trigger: GGGCAGATCCTGGCAGAAGCAGATGGACTGAGCACA...GTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTGAGGGCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR GCA 90 bp | ATCAGCTGCCAACTGGATGTAGAAATTATGGAGAACCCTGCCTCTGGGCCAGAGAGGTTGGGAAAGCGGTaGCTCAACTCCTCAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCQLDVEIMENPASGPERLGKR*LNSSIR Trigger: CCTGATTGAGGAGTTGAGGCACCGCTTTCCCAACCT...CTCTGGCCCAGAGGCAGGGTTCTCCATAATTTCTACATCCAGTTGGCAGCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGAATATCATGAGGAGCTaGCTCCAGGTTGTCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQNIMRS*LQVVDG Trigger: TCCATCGACAACCTGGAGGCAGCTCCTCATGATATT...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGAAAGTAAAAGGACTTTaGACCGTGTGCCTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQKVKGL*TVCLPL Trigger: AAGGGGGAGGCACACGGTCCAAAGTCCTTTTACTTT...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000037376.14 |
||
| CDS-3UTR CCA 90 bp | AGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCTAGGGAAGATCCTCTCCACACACTaGTCTGTGCCAATCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCQGHAQQCMEDDTLLGKILSTH*SVPISQ Trigger: CTGGCTGATTGGCACAGACCAGTGTGTGGAGAGGAT...CTTCCCTAGCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGAGTTTTCACTCAGGTTaGGAAAGCGGTGCCTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQSFHSG*ESGAST Trigger: AGTTGAGGCACCGCTTTCCCAACCTGAGTGAAAACT...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGGAGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCAGTTTTCACTCAGGTTaGGAAAGCGGTGCCTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PAGGAKDMHSNVWKMTPCSFHSG*ESGAST Trigger: AGTTGAGGCACCGCTTTCCCAACCTGAGTGAAAACT...GCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCTCCAGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACAAGTCCCTATACAAATaGGTGAGGATTCCAAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDKSLYK*VRIPSR Trigger: TCGGCTTGGAATCCTCACCCATTTGTATAGGGACTT...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGAACCGGGTCAATCTCTaGCAATACTGCCACAACATG | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQNRVNL*QYCHNM Trigger: CATGTTGTGGCAGTATTGCCAGAGATTGACCCGGTT...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGAAAGTAAAAGGACTTTaGACCGTGTGCCTCCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQKVKGL*TVCLPV Trigger: AACGGGGAGGCACACGGTCCAAAGTCCTTTTACTTT...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAAATATCATGAGGAGCTaGCTCCAGGTTGTCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTNIMRS*LQVVDG Trigger: TCCATCGACAACCTGGAGGCAGCTCCTCATGATATT...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTCTGATGTGCACCTTCTaGAATTTTCTGGCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTLMCTF*NFLAKS Trigger: GGATTTTGCCAGAAAATTGCAGAAGGTGCACATCAG...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAAACCGGGTCAATCTCTaGCAATACTGCCACAACATG | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTNRVNL*QYCHNM Trigger: CATGTTGTGGCAGTATTGCCAGAGATTGACCCGGTT...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACCTACAGCTACAGTCCATCTGCTTCTaGCAGGATCTGCCCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGIHAHMRKKNCPVYLQLQSICF*QDLPIL Trigger: GAGGATGGGCAGATCCTGGCAGAAGCAGATGGACTG...TAGCTGTAGGTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTCCTCCAGGTTGTCGATaGAATCAAACACAATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTPPGCR*NQTQFS Trigger: TGAAAATTGTGTTTGATTCCATCGACAACCTGGAGG...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAAAGTCCCTATACAAATaGGTGAGGATTCCAAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTKSLYK*VRIPSR Trigger: TCGGCTTGGAATCCTCACCCATTTGTATAGGGACTT...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACCCTTCTGCAATTTTCTaGCAAAATCCAGCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKESLPALGVGWLGRGTDPSAIF*QNPANL Trigger: CAAGTTTGCTGGATTTTGCCAGAAAATTGCAGAAGG...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACCTACAGCTAACATGGCCAATATCATaGGGAGCTGCCTCCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGIHAHMRKKNCPVYLQLTWPIS*GAASRL Trigger: CAACCTGGAGGCAGCTCCTCATGATATTGGCCATGT...TAGCTGTAGGTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGCCCTCAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACGCTTCTGCCAGGATCTaGCCATCCTCAGAAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPQGIHAHMRKKNCPVYASARI*PSSESK Trigger: TTTACTTTCTGAGGATGGGCAGATCCTGGCAGAAGC...GTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTGAGGGCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACACTGATGTGCACCTTCTaGAATTTTCTGGCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: FKKESLPALGVGWLGRGTLMCTF*NFLAKS Trigger: GGATTTTGCCAGAAAATTGCAGAAGGTGCACATCAG...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGCCTTCTGCAATTTTCTaGCAAAATCCAGCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQPSAIF*QNPANL Trigger: CAAGTTTGCTGGATTTTGCCAGAAAATTGCAGAAGG...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTGGCAGCCAAAGCATATAGTGTGGAAATGGGAAGGTCTGGGCTCTTATATTGTCCACCATCTCATTaGTCCTCTCCACACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLAAKAYSVEMGRSGLLYCPPSH*SSPHTG Trigger: ACCAGTGTGTGGAGAGGATCAATGAGATGGTGGACA...ATATAAGAGCCCAGACCTTCCCATTTCCACACTATATGCTTTGGCTGCCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATAAAATTAAGTCAAAATTGAGACTAGGATTGTACTGTCTCCCAGAGCTTGGTATCCAATGTGCCTaGCCCCCAGGCTGGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PNKIKSKLRLGLYCLPELGIQCA*PPGWHP Trigger: GGGGTGCCAGCCTGGGGGCCAGGCACATTGGATACC...AAGCTCTGGGAGACAGTACAATCCTAGTCTCAATTTTGACTTAATTTTATTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR TCA 90 bp | CGGAGAGCGAGAAAACAAACCCAGAGGTTAATAGCATTGTTGCACATCATACCTCGAACATGGCCTGCTTaGCATGGCCAATATCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRARKQTQRLIALLHIIPRTWPA*HGQYHE Trigger: CTCATGATATTGGCCATGTCAAGCAGGCCATGTTCG...AGGTATGATGTGCAACAATGCTATTAACCTCTGGGTTTGTTTTCTCGCTCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACCTACAGCTAAAAGTAAAAGGACTTTaGACCGTGTGCCTCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGIHAHMRKKNCPVYLQLKVKGL*TVCLPL Trigger: AAGGGGGAGGCACACGGTCCAAAGTCCTTTTACTTT...TAGCTGTAGGTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCTAGGGAAGCCTCCAGGTTGTCGATaGAATCAAACACAATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCQGHAQQCMEDDTLLGKPPGCR*NQTQFS Trigger: TGAAAATTGTGTTTGATTCCATCGACAACCTGGAGG...CTTCCCTAGCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCATACTTGCTGAGATGGCACCTTCCTGGCTATGCCTTATGGACACATGTAAGTCCCTATACAAATaGGTGAGGATTCCAAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KLILAEMAPSWLCLMDTCKSLYK*VRIPSR Trigger: TCGGCTTGGAATCCTCACCCATTTGTATAGGGACTT...ACATGTGTCCATAAGGCATAGCCAGGAAGGTGCCATCTCAGCAAGTATGAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | CGGAGAGCGAGAAAACAAACCCAGAGGTTAATAGCATTGTTGCACATCATACCTAGGCCAAGCTCCCCTTaGAACAAAACCTTCTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRARKQTQRLIALLHIIPRPSSP*NKTFCN Trigger: ATTGCAGAAGGTTTTGTTCCAAGGGGAGCTTGGCCT...AGGTATGATGTGCAACAATGCTATTAACCTCTGGGTTTGTTTTCTCGCTCTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATAAAATTAAGTCAAAATTGAGACTAGGATTGTACTGTCTCCCAGAGCTTCTCCAGCCTTCTGTTTaGCCCTGTCCACCATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PNKIKSKLRLGLYCLPELLQPSV*PCPPSH Trigger: ATGAGATGGTGGACAGGGCCAAACAGAAGGCTGGAG...AAGCTCTGGGAGACAGTACAATCCTAGTCTCAATTTTGACTTAATTTTATTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATAAAATTAAGTCAAAATTGAGACTAGGATTGTACTGTCTCCCAGAGCTTGTGCCAATCAGCCAGTaGTTTGTGCTCAGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PNKIKSKLRLGLYCLPELVPISQ*FVLSPS Trigger: AGATGGACTGAGCACAAACCACTGGCTGATTGGCAC...AAGCTCTGGGAGACAGTACAATCCTAGTCTCAATTTTGACTTAATTTTATTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR GCA 90 bp | CCAAATAAAATTAAGTCAAAATTGAGACTAGGATTGTACTGTCTCCCAGAGCTTAATATCATGAGGAGCTaGCTCCAGGTTGTCGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNKIKSKLRLGLYCLPELNIMRS*LQVVDG Trigger: TCCATCGACAACCTGGAGGCAGCTCCTCATGATATT...AAGCTCTGGGAGACAGTACAATCCTAGTCTCAATTTTGACTTAATTTTATTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATAAAATTAAGTCAAAATTGAGACTAGGATTGTACTGTCTCCCAGAGCTTCCTTCTGCAATTTTCTaGCAAAATCCAGCAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNKIKSKLRLGLYCLPELPSAIF*QNPANL Trigger: CAAGTTTGCTGGATTTTGCCAGAAAATTGCAGAAGG...AAGCTCTGGGAGACAGTACAATCCTAGTCTCAATTTTGACTTAATTTTATTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS CCA 90 bp | GAAAGTAAAAGGACTTTGGACCGTGTGCCTCCCCGTTGCCACCGCTaGTCCGCCGTAGCAACCTCGACCCTAGCCGTGACTTCGCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ESKRTLDRVPPRCHR*SAVATSTLAVTSLP Trigger: CGGGAGCGAAGTCACGGCTAGGGTCGAGGTTGCTACGGCGGACCAGCGGTGGCAACGGGGAGGCACACGGTCCAAAGTCCTTTTACTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113851.8 |
||
| CDS GCA 90 bp | CCATCCTCAGAAAGTAAAAGGACTTTGGACCGTGTGCCTCCCCGTTaGCACCGCTGGTCCGCCGTAGCAACCTCGACCCTAGCCGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PSSESKRTLDRVPPR*HRWSAVATSTLAVT Trigger: AGTCACGGCTAGGGTCGAGGTTGCTACGGCGGACCAGCGGTGGCAACGGGGAGGCACACGGTCCAAAGTCCTTTTACTTTCTGAGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGAGTTTTTCCTGGAAGGATTACCTCCAGAGGAAAGGCCCTCCCCACTAGGCTCGGTGTTGGCTGGTaGGGCAGGGGGACAGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARVFPGRITSRGKALPTRLGVGW*GRGTDS Trigger: AGAGTCTGTCCCCCTGCCCAACCAGCCAACACCGAG...CCTAGTGGGGAGGGCCTTTCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS CCA 90 bp | CCTTCAGGAGCTCCCAGCTCTTCCACACTGAGCCCACACACAGAATaGGGAGGCCAAGCTCCCCTTGGAACAAAACCGGGTCAATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSGAPSSSTLSPHTE*GGQAPLGTKPGQSL Trigger: CAGAGATTGACCCGGTTTTGTTCCAAGGGGAGCTTGGCCTCCCCATTCTGTGTGTGGGCTCAGTGTGGAAGAGCTGGGAGCTCCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTACTCCAGCCTTCTGTTaGGCCCTGTCCACCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTTPAFC*ALSTIS Trigger: TGAGATGGTGGACAGGGCCAAACAGAAGGCTGGAGT...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACGAGGCCAAGCTCCCCTaGGAACAAAACCGGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KKESLPALGVGWLGRGTDEAKLP*EQNRVN Trigger: ATTGACCCGGTTTTGTTCCAAGGGGAGCTTGGCCTC...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS TCA 90 bp | CACCGTCCGGTGTGGCTGTGGCGATGGAACCTGCTGCATCCGTGGTaGTTAAGTAGTTTTCACTCAGGTTGGGAAAGCGGTGCCTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: HRPVWLWRWNLLHPW*LSSFHSGWESGAST Trigger: AGTTGAGGCACCGCTTTCCCAACCTGAGTGAAAACTACTTAATCACCACGGATGCAGCAGGTTCCATCGCCACAGCCACACCGGACGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS-3UTR CAA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTCCAGCCTTCTGTTaGGCCCTGTCCACCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQTPAFC*ALSTIS Trigger: TGAGATGGTGGACAGGGCCAAACAGAAGGCTGGAGT...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTTCGGAGCCATCAGGGTaGATAAGCCTACAGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTSEPSG*ISLQLE Trigger: CTCCAACTGTAGGCTTATCAACCCTGATGGCTCCGA...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACGGAGCTGCCTCCAGGTaGTCGATGGAATCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: KKESLPALGVGWLGRGTDGAASR*SMESNT Trigger: TGTGTTTGATTCCATCGACAACCTGGAGGCAGCTCC...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTGGAGCTGCCTCCAGGTaGTCGATGGAATCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTGAASR*SMESNT Trigger: TGTGTTTGATTCCATCGACAACCTGGAGGCAGCTCC...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTGAAAGTAAAAGGACTTaGGACCGTGTGCCTCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTESKRT*DRVPPR Trigger: ACGGGGAGGCACACGGTCCAAAGTCCTTTTACTTTC...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGGAAAGTAAAAGGACTTaGGACCGTGTGCCTCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQESKRT*DRVPPP Trigger: AGGGGGAGGCACACGGTCCAAAGTCCTTTTACTTTC...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000037376.14 |
||
| CDS-3UTR CAA 90 bp | GGGCCAGAGTTTTTCCTGGAAGGATTACCTCCAGAGGAAAGGCCCTCCCCACTAGAAAGTAAAAGGACTTaGGACCGTGTGCCTCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPEFFLEGLPPEERPSPLESKRT*DRVPPP Trigger: AGGGGGAGGCACACGGTCCAAAGTCCTTTTACTTTC...TAGTGGGGAGGGCCTTTCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACTCAATCAGCCAGTGGTTaGTGCTCAGTCCATCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRKVSQLSVLAGWAGGQTQSASG*CSVHLL Trigger: AAGCAGATGGACTGAGCACAAACCACTGGCTGATTG...AGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACCAATCAGCCAGTGGTTaGTGCTCAGTCCATCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KKESLPALGVGWLGRGTDQSASG*CSVHLL Trigger: AAGCAGATGGACTGAGCACAAACCACTGGCTGATTG...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCAGCTTCTGGCAGCCAAAGCATATAGTGTGGAAATGGGAAGGTCTGGGCTGTCCACCATCTCATaGATCCTCTCCACACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSQLLAAKAYSVEMGRSGLSTIS*ILSTHW Trigger: CCAGTGTGTGGAGAGGATCAATGAGATGGTGGACAG...CCCAGACCTTCCCATTTCCACACTATATGCTTTGGCTGCCAGAAGCTGGGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGTCGGAGCCATCAGGGTaGATAAGCCTACAGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LKRKVSQLSVLAGWAGGQSEPSG*ISLQLE Trigger: CTCCAACTGTAGGCTTATCAACCCTGATGGCTCCGA...CTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGAGGCCAAGCTCCCCTaGGAACAAAACCGGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FKKESLPALGVGWLGRGTEAKLP*EQNRVN Trigger: ATTGACCCGGTTTTGTTCCAAGGGGAGCTTGGCCTC...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS TCA 90 bp | TTCCAAGCCGATCTGGCACCTGGAAATAGTCGAACATGGCCTGCTTaGCATGGCCAATATCATGAGGAGCTGCCTCCAGGTTGTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: FQADLAPGNSRTWPA*HGQYHEELPPGCRW Trigger: CCATCGACAACCTGGAGGCAGCTCCTCATGATATTGGCCATGTCAAGCAGGCCATGTTCGACTATTTCCAGGTGCCAGATCGGCTTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
||
| CDS TCA 90 bp | GCAATACTGCCACAACATGTCTGCCCAGCATCTCTCCAGCCTTCCTaGAGATGTACCTGGAAAGAGGGTCTCCCTGATGTGCACCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AILPQHVCPASLQPS*RCTWKEGLPDVHLL Trigger: CAGAAGGTGCACATCAGGGAGACCCTCTTTCCAGGTACATCTTCAGGAAGGCTGGAGAGATGCTGGGCAGACATGTTGTGGCAGTATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
||
| CDS GCA 90 bp | ATCAGCCAGTGGTTTGTGCTCAGTCCATCTGCTTCTGCCAGGATCTaGCCATCCTCAGAAAGTAAAAGGACTTTGGACCGTGTGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISQWFVLSPSASARI*PSSESKRTLDRVPP Trigger: GGGAGGCACACGGTCCAAAGTCCTTTTACTTTCTGAGGATGGGCAGATCCTGGCAGAAGCAGATGGACTGAGCACAAACCACTGGCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
||
| CDS GCA 90 bp | GCCAAGCTCCCCTTGGAACAAAACCGGGTCAATCTCTGGCAATACTaGCACAACATGTCTGCCCAGCATCTCTCCAGCCTTCCTGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AKLPLEQNRVNLWQY*HNMSAQHLSSLPED Trigger: ATCTTCAGGAAGGCTGGAGAGATGCTGGGCAGACATGTTGTGGCAGTATTGCCAGAGATTGACCCGGTTTTGTTCCAAGGGGAGCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACACTGTCCACCATCTCATaGATCCTCTCCACACACTGG | + |
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Preference number: 5 (lower is better) Translates to: FKKESLPALGVGWLGRGTLSTIS*ILSTHW Trigger: CCAGTGTGTGGAGAGGATCAATGAGATGGTGGACAG...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CAA 90 bp | AGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCTAGGGAAGACTCCAGCCTTCTGTTaGGCCCTGTCCACCATCTCA | + |
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Preference number: 5 (lower is better) Translates to: RCQGHAQQCMEDDTLLGKTPAFC*ALSTIS Trigger: TGAGATGGTGGACAGGGCCAAACAGAAGGCTGGAGT...CTTCCCTAGCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACAGACCACAATTTTCACAGCTaGGTGTGCAATCCAGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: KKESLPALGVGWLGRGTDHNFHS*VCNPVG Trigger: GCCTACTGGATTGCACACCAAGCTGTGAAAATTGTG...GTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CAA 90 bp | CGGAGAGCGAGAAAACAAACCCAGAGGTTAATAGCATTGTTGCACATCATACCTTCCCAGCTCTCGGTGTaGGCTGGTTGGGCAGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: RRARKQTQRLIALLHIIPSQLSV*AGWAGG Trigger: TCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGA...AGGTATGATGTGCAACAATGCTATTAACCTCTGGGTTTGTTTTCTCGCTCTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CAA 90 bp | GGGCCAGAGTTTTTCCTGGAAGGATTACCTCCAGAGGAAAGGCCCTCCCCACTATTGATAAGCCTACAGTaGGAGCCTGTTCCAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: GPEFFLEGLPPEERPSPLLISLQ*EPVPEM Trigger: CATCTCTGGAACAGGCTCCAACTGTAGGCTTATCAA...TAGTGGGGAGGGCCTTTCCTCTGGAGGTAATCCTTCCAGGAAAAACTCTGGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CAA 90 bp | ATCAGCTGCCAACTGGATGTAGAAATTATGGAGAACCCTGCCTCTGGGCCAGAGTCGGAGCCATCAGGGTaGATAAGCCTACAGTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: ISCQLDVEIMENPASGPESEPSG*ISLQLE Trigger: CTCCAACTGTAGGCTTATCAACCCTGATGGCTCCGA...CTCTGGCCCAGAGGCAGGGTTCTCCATAATTTCTACATCCAGTTGGCAGCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CAA 90 bp | GGGTCCCAGCTTCTGGCAGCCAAAGCATATAGTGTGGAAATGGGAAGGTCTGGGCACAATTTTCACAGCTaGGTGTGCAATCCAGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: GSQLLAAKAYSVEMGRSGHNFHS*VCNPVG Trigger: GCCTACTGGATTGCACACCAAGCTGTGAAAATTGTG...CCCAGACCTTCCCATTTCCACACTATATGCTTTGGCTGCCAGAAGCTGGGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CAA 90 bp | AGGTGCCAAGGACATGCACAGCAATGTATGGAAGATGACACCCTGCTAGGGAAGGAGGCCAAGCTCCCCTaGGAACAAAACCTTCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: RCQGHAQQCMEDDTLLGKEAKLP*EQNLLQ Trigger: TTGCAGAAGGTTTTGTTCCAAGGGGAGCTTGGCCTC...CTTCCCTAGCAGGGTGTCATCTTCCATACATTGCTGTGCATGTCCTTGGCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CAA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACATTGATAAGCCTACAGTaGGAGCCTGTTCCAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: FKKESLPALGVGWLGRGTLISLQ*EPVPEM Trigger: CATCTCTGGAACAGGCTCCAACTGTAGGCTTATCAA...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTGGGCAGGGGGACACACAATTTTCACAGCTaGGTGTGCAATCCAGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: FKKESLPALGVGWLGRGTHNFHS*VCNPVG Trigger: GCCTACTGGATTGCACACCAAGCTGTGAAAATTGTG...TGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS-3UTR CAA 90 bp | CAGGGGATTCATGCACACATGAGAAAGAAAAACTGCCCTGTGTACCTACAGCTACAATCAGCCAGTGGTTaGTGCTCAGTCCATCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: QGIHAHMRKKNCPVYLQLQSASG*CSVHLL Trigger: AAGCAGATGGACTGAGCACAAACCACTGGCTGATTG...TAGCTGTAGGTACACAGGGCAGTTTTTCTTTCTCATGTGTGCATGAATCCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS-3UTR CAA 90 bp | CGGAGAGCGAGAAAACAAACCCAGAGGTTAATAGCATTGTTGCACATCATACCTGGAGCTGCCTCCAGGTaGTCGATGGAATCAAACACA | + |
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Preference number: 5 (lower is better) Translates to: RRARKQTQRLIALLHIIPGAASR*SMESNT Trigger: TGTGTTTGATTCCATCGACAACCTGGAGGCAGCTCC...AGGTATGATGTGCAACAATGCTATTAACCTCTGGGTTTGTTTTCTCGCTCTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS GCA 90 bp | ATAGTCGAACATGGCCTGCTTGACATGGCCAATATCATGAGGAGCTaGCTCCAGGTTGTCGATGGAATCAAACACAATTTTCACAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IVEHGLLDMANIMRS*LQVVDGIKHNFHSL Trigger: CAAGCTGTGAAAATTGTGTTTGATTCCATCGACAACCTGGAGGCAGCTCCTCATGATATTGGCCATGTCAAGCAGGCCATGTTCGACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS TCA 90 bp | AAAATCCAGCAAACTTGCATTTATCAAAGTCCCTATACAAATGGGTaGGGATTCCAAGCCGATCTGGCACCTGGAAATAGTCGAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: KIQQTCIYQSPYTNG*GFQADLAPGNSRTW Trigger: CCATGTTCGACTATTTCCAGGTGCCAGATCGGCTTGGAATCCTCACCCATTTGTATAGGGACTTTGATAAATGCAAGTTTGCTGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS GCA 72 bp | AAAGCGGTGCCTCAACTCCTCAATCAGGAGCCTCACTaGATCCTCCTGCTCCCCACCACTCAGGGACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: KAVPQLLNQEPH*ILLLPTTQGQA Trigger: GGCCTGTCCCTGAGTGGTGGGGAGCAGGAGGATGCAGTGAGGCTCCTGATTGAGGAGTTGAGGCACCGCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS GCA 72 bp | GAAAGTAAAAGGACTTTGGACCGTGTGCCTCCCCGTTaGCACCGCTGGTCCGCCGTAGCAACCTCGACCCTA | + |
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Preference number: 6 (lower is better) Translates to: ESKRTLDRVPPR*HRWSAVATSTL Trigger: TAGGGTCGAGGTTGCTACGGCGGACCAGCGGTGGCAACGGGGAGGCACACGGTCCAAAGTCCTTTTACTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113851.8 |
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| CDS CCA 72 bp | GCTCCCAGCTCTTCCACACTGAGCCCACACACAGAATaGGGAGGCCAAGCTCCCCTTGGAACAAAACCGGGT | + |
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Preference number: 6 (lower is better) Translates to: APSSSTLSPHTE*GGQAPLGTKPG Trigger: ACCCGGTTTTGTTCCAAGGGGAGCTTGGCCTCCCCATTCTGTGTGTGGGCTCAGTGTGGAAGAGCTGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS CAA 90 bp | CCTCCACAGCCACTCTCGGAGCCATCAGGGTTGATAAGCCTACAGTaGGAGCCTGTTCCAGAGATGAGCACAATCCCACCGTCCGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: PPQPLSEPSGLISLQ*EPVPEMSTIPPSGV Trigger: CACACCGGACGGTGGGATTGTGCTCATCTCTGGAACAGGCTCCAACTGTAGGCTTATCAACCCTGATGGCTCCGAGAGTGGCTGTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS CAA 72 bp | CCCCAGCCTCCACAGCCACTCTCGGAGCCATCAGGGTaGATAAGCCTACAGTTGGAGCCTGTTCCAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: PQPPQPLSEPSG*ISLQLEPVPEM Trigger: CATCTCTGGAACAGGCTCCAACTGTAGGCTTATCAACCCTGATGGCTCCGAGAGTGGCTGTGGAGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS CCA 72 bp | GCTCCCAGCTCTTCCACACTGAGCCCACACACAGAATaGGGAGGCCAAGCTCCCCTTGGAACAAAACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: APSSSTLSPHTE*GGQAPLGTKPS Trigger: AGAAGGTTTTGTTCCAAGGGGAGCTTGGCCTCCCCATTCTGTGTGTGGGCTCAGTGTGGAAGAGCTGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS CAA 90 bp | ATCATGTGGCCCCAGCCTCCACAGCCACTCTCGGAGCCATCAGGGTaGATAAGCCTACAGTTGGAGCCTGTTCCAGAGATGAGCACAATC | + |
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Preference number: 6 (lower is better) Translates to: IMWPQPPQPLSEPSG*ISLQLEPVPEMSTI Trigger: GATTGTGCTCATCTCTGGAACAGGCTCCAACTGTAGGCTTATCAACCCTGATGGCTCCGAGAGTGGCTGTGGAGGCTGGGGCCACATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS CAA 72 bp | CCACTCTCGGAGCCATCAGGGTTGATAAGCCTACAGTaGGAGCCTGTTCCAGAGATGAGCACAATCCCACCG | + |
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Preference number: 6 (lower is better) Translates to: PLSEPSGLISLQ*EPVPEMSTIPP Trigger: CGGTGGGATTGTGCTCATCTCTGGAACAGGCTCCAACTGTAGGCTTATCAACCCTGATGGCTCCGAGAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS CCA 72 bp | GCCCTGTCCACCATCTCATTGATCCTCTCCACACACTaGTCTGTGCCAATCAGCCAGTGGTTTGTGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: ALSTISLILSTH*SVPISQWFVLS Trigger: ACTGAGCACAAACCACTGGCTGATTGGCACAGACCAGTGTGTGGAGAGGATCAATGAGATGGTGGACAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS CCA 72 bp | GCCAAGCTCCCCTTGGAACAAAACCGGGTCAATCTCTaGCAATACTGCCACAACATGTCTGCCCAGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: AKLPLEQNRVNL*QYCHNMSAQHL Trigger: GAGATGCTGGGCAGACATGTTGTGGCAGTATTGCCAGAGATTGACCCGGTTTTGTTCCAAGGGGAGCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS CAA 90 bp | AGAGGATCCACTCCAGCCTTCTGTTTGGCCCTGTCCACCATCTCATaGATCCTCTCCACACACTGGTCTGTGCCAATCAGCCAGTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RGSTPAFCLALSTIS*ILSTHWSVPISQWF Trigger: AAACCACTGGCTGATTGGCACAGACCAGTGTGTGGAGAGGATCAATGAGATGGTGGACAGGGCCAAACAGAAGGCTGGAGTGGATCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS TCA 72 bp | GTGTGGCTGTGGCGATGGAACCTGCTGCATCCGTGGTaGTTAAGTAGTTTTCACTCAGGTTGGGAAAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: VWLWRWNLLHPW*LSSFHSGWESG Trigger: ACCGCTTTCCCAACCTGAGTGAAAACTACTTAATCACCACGGATGCAGCAGGTTCCATCGCCACAGCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS GCA 72 bp | CCCTTGGAACAAAACCGGGTCAATCTCTGGCAATACTaGCACAACATGTCTGCCCAGCATCTCTCCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PLEQNRVNLWQY*HNMSAQHLSSL Trigger: AAGGCTGGAGAGATGCTGGGCAGACATGTTGTGGCAGTATTGCCAGAGATTGACCCGGTTTTGTTCCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037376.14 ENSMUST00000113851.8 |
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| CDS CCA 72 bp | AAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTTaGGCAGGGGGACAGACTCTAGAAGGTATAGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: KRKVSQLSVLAG*AGGQTLEGIGI Trigger: TATTCCTATACCTTCTAGAGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS CCA 72 bp | TTTAAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTaGTTGGGCAGGGGGACAGACTCTAGAAGGTATAGG | + |
|
Preference number: 6 (lower is better) Translates to: FKKESLPALGVG*LGRGTDSRRYR Trigger: CCTATACCTTCTAGAGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS CAA 72 bp | AAAAAGGAAAGTCTCCCAGCTCTCGGTGTTGGCTGGTaGGGCAGGGGGACAGACTCTAGAAGGTATAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: KKESLPALGVGW*GRGTDSRRYRN Trigger: ATTCCTATACCTTCTAGAGTCTGTCCCCCTGCCCAACCAGCCAACACCGAGAGCTGGGAGACTTTCCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113850.2 |
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| CDS GCA 72 bp | CATGGCCTGCTTGACATGGCCAATATCATGAGGAGCTaGCTCCAGGTTGTCGATGGAATCAAACACAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: HGLLDMANIMRS*LQVVDGIKHNF Trigger: AAAATTGTGTTTGATTCCATCGACAACCTGGAGGCAGCTCCTCATGATATTGGCCATGTCAAGCAGGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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| CDS TCA 72 bp | CAAACTTGCATTTATCAAAGTCCCTATACAAATGGGTaGGGATTCCAAGCCGATCTGGCACCTGGAAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: QTCIYQSPYTNG*GFQADLAPGNS Trigger: ACTATTTCCAGGTGCCAGATCGGCTTGGAATCCTCACCCATTTGTATAGGGACTTTGATAAATGCAAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037376.14 ENSMUST00000113850.2 ENSMUST00000113851.8 |
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