Pregenerated sensors for NAE1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031878

Ensembl transcript IDs: ENSMUST00000034349.10, ENSMUST00000162466.8

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	AGCAGCAGCTCCTCCCAGGAACGCAGCAATGGTGTGTaGCTCAGCAGCTCCGTACCGGCAAAATTCATGGAC	+
Preference number: 6 (lower is better) Translates to: SSSSSQERSNGV*LSSSVPAKFMD Trigger: GTCCATGAATTTTGCCGGTACGGAGCTGCTGAGCCACACACCATTGCTGCGTTCCTGGGAGGAGCTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034349.10 ENSMUST00000162466.8
CDS CCA 72 bp	TGGACTCTGGTGCCTGGCCAACAGACTGAAGCAATTTaGCAACGTGATTGCCTACAGCAGCAGCATCTTTCT	+
Preference number: 6 (lower is better) Translates to: WTLVPGQQTEAI*QRDCLQQQHLS Trigger: AGAAAGATGCTGCTGCTGTAGGCAATCACGTTGCCAAATTGCTTCAGTCTGTTGGCCAGGCACCAGAGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034349.10 ENSMUST00000162466.8
CDS CAA 90 bp	TCAACAGCCCGCAACATCAGGTACAGGACTATCTCATTATCCGGATaGTCCATGCTAGAAATAATTTCATCTTTGTTGACTGTATCCAAG	+
Preference number: 6 (lower is better) Translates to: STARNIRYRTISLSG*SMLEIISSLLTVSK Trigger: CTTGGATACAGTCAACAAAGATGAAATTATTTCTAGCATGGACAATCCGGATAATGAGATAGTCCTGTACCTGATGTTGCGGGCTGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034349.10 ENSMUST00000162466.8
CDS TCA 72 bp	CTCTCGGTAAACATTCTGCAGTTTTATGTATTTGTTTaGATCTGCAATCATATCAGGAATTGTGCCTCGGAC	+
Preference number: 6 (lower is better) Translates to: LSVNILQFYVFV*ICNHIRNCASD Trigger: GTCCGAGGCACAATTCCTGATATGATTGCAGATTCAAACAAATACATAAAACTGCAGAATGTTTACCGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034349.10 ENSMUST00000162466.8
CDS CAA 72 bp	TTATCCGGATTGTCCATGCTAGAAATAATTTCATCTTaGTTGACTGTATCCAAGCCATACTCTTCAGCTAAA	+
Preference number: 6 (lower is better) Translates to: LSGLSMLEIISS*LTVSKPYSSAK Trigger: TTTAGCTGAAGAGTATGGCTTGGATACAGTCAACAAAGATGAAATTATTTCTAGCATGGACAATCCGGATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034349.10 ENSMUST00000162466.8

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