Pregenerated sensors for NADK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029063Ensembl transcript IDs: ENSMUST00000030939.14, ENSMUST00000105612.2, ENSMUST00000105613.10, ENSMUST00000146080.8
Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGACGTGGCTGACCACTGACTCCACAAAGGCTCTAGGGCGTGTGTaGCACTCACGGCCTGTGTGGCACTCACGTGCTAATGTTACTTGC | + |
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Preference number: 1 (lower is better) Translates to: TTWLTTDSTKALGRV*HSRPVWHSRANVTC Trigger: GCAAGTAACATTAGCACGTGAGTGCCACACAGGCCGTGAGTGCCACACACGCCCTAGAGCCTTTGTGGAGTCAGTGGTCAGCCACGTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CCA 90 bp | CCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATaGCTGTGCCAAGTGTTGCCTCTGTCTGCTCTGGAAGGAGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: PGAAALLCEECEVVG*LCQVLPLSALEGVR Trigger: TCTGACTCCTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR GCA 90 bp | TGTTGTGTGAGGAATGTGAGGTTGTTGGATGGCTGTGCCAAGTGTTaGCTCTGTCTGCTCTGGAAGGAGTCAGAGGTCTGGGGGCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: CCVRNVRLLDGCAKC*LCLLWKESEVWGPD Trigger: GTCTGGCCCCCAGACCTCTGACTCCTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR GCA 90 bp | GCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGCTGTaGCAAGTGTTGCCTCTGTCTGCTCTGGAAGGAGTCAGAGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: AAALLCEECEVVGWL*QVLPLSALEGVRGL Trigger: CAGACCTCTGACTCCTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR GCA 90 bp | GTGTGGCACTCACGGCCTGTGTGGCACTCACGTGCTAATGTTACTTaGATTACATGGCTCCATGCATCTCGCACACAGGCTCCATATGGC | + |
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Preference number: 1 (lower is better) Translates to: VWHSRPVWHSRANVT*ITWLHASRTQAPYG Trigger: GCCATATGGAGCCTGTGTGCGAGATGCATGGAGCCATGTAATGCAAGTAACATTAGCACGTGAGTGCCACACAGGCCGTGAGTGCCACAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CCA 90 bp | TCACGGCCTGTGTGGCACTCACGTGCTAATGTTACTTGCATTACATaGCTCCATGCATCTCGCACACAGGCTCCATATGGCTGCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: SRPVWHSRANVTCIT*LHASRTQAPYGCCS Trigger: TGAACAGCAGCCATATGGAGCCTGTGTGCGAGATGCATGGAGCCATGTAATGCAAGTAACATTAGCACGTGAGTGCCACACAGGCCGTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR TCA 90 bp | ATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTaGGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCA | + |
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Preference number: 1 (lower is better) Translates to: ISLVAAASRFVNTCF*DAWHTLQTLLSSGS Trigger: TGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CAA 90 bp | TGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTaGGATGGCTGTGCCAAGTGTTGCCTCTGTCTGCTCTGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: CPQGLLPCCVRNVRL*DGCAKCCLCLLWKE Trigger: CTCCTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGTGCCTCTGTCTGCTCTaGAAGGAGTCAGAGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSPGAAALLCEECEVVGWCLCLL*KESEVW Trigger: CCAGACCTCTGACTCCTTCCAGAGCAGACAGAGGCA...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CAA 90 bp | GAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGCTTGCCTaGCCCACCCATAGCAAAGCTGCCAGGGGGAAAGGTACAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ERDLAISRNTKSKLA*PTHSKAARGKGTGP Trigger: AGGGCCTGTACCTTTCCCCCTGGCAGCTTTGCTATGGGTGGGCAAGGCAAGCTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CAA 90 bp | CTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGCTGTGCCAAGTGTaGCCTCTGTCTGCTCTGGAAGGAGTCAGAGGTCTGGGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LLCEECEVVGWLCQV*PLSALEGVRGLGAR Trigger: TCTGGCCCCCAGACCTCTGACTCCTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGATTTATGGGAATTCCTaGCCTGGGAATCTCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LSPGAAALLCEECEVVGWIYGNS*PGNLRG Trigger: CCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAAT...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCAAAGAGCTTGAGGGTCTaGGCAGGTTGGAAGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LLRCVAHTSDPALLWIIAKSLRV*AGWKLG Trigger: TCCCAGCTTCCAACCTGCGCAGACCCTCAAGCTCTT...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGTGGGAATTCCTGACCTaGGAATCTCAGGGGGATACG | + |
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Preference number: 2 (lower is better) Translates to: SGGQTERDLAISRNTKSKWEFLT*ESQGDT Trigger: CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCA...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGTGCCTCTGTCTGCTCTaGAAGGAGTCAGAGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SFRLLLQEVRTKLKVASECLCLL*KESEVW Trigger: CCAGACCTCTGACTCCTTCCAGAGCAGACAGAGGCA...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGATTTATGGGAATTCCTaGCCTGGGAATCTCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SGGQTERDLAISRNTKSKIYGNS*PGNLRG Trigger: CCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAAT...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGCAGGACATAGATGCCTaGACAGCCATGTGGTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SGGQTERDLAISRNTKSKQDIDA*TAMWFV Trigger: GACAAACCACATGGCTGTCCAGGCATCTATGTCCTG...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTGGGAATTCCTGACCTaGGAATCTCAGGGGGATACG | + |
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Preference number: 2 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSWEFLT*ESQGDT Trigger: CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCA...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGTGTGAGGTTGTTGGATaGCTGTGCCAAGTGTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SFRLLLQEVRTKLKVASECEVVG*LCQVLP Trigger: AGGCAACACTTGGCACAGCCATCCAACAACCTCACA...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | TTTCAACAGACTGATTTATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGAAGAGCTTGAGGGTCTaGGCAGGTTGGAAGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: FQQTDLWEFLTWESQGDTKSLRV*AGWKLG Trigger: TCCCAGCTTCCAACCTGCGCAGACCCTCAAGCTCTT...CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGAAAGCTGATCTGTTCTaGAAAAGGCAGACCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SGGQTERDLAISRNTKSKKADLF*KRQTQA Trigger: AGCTTGGGTCTGCCTTTTGCAGAACAGATCAGCTTT...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAGGCTGTGCCAAGTGTTaGCTCTGTCTGCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSGCAKC*LCLLWK Trigger: CTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCC...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGAAGAGCTTGAGGGTCTaGGCAGGTTGGAAGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMKSLRV*AGWKLG Trigger: TCCCAGCTTCCAACCTGCGCAGACCCTCAAGCTCTT...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | TTTCAACAGACTGATTTATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGCAGGCAGGACATAGATaGCTGGACAGCCATGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: FQQTDLWEFLTWESQGDTQAGHR*LDSHVV Trigger: AACCACATGGCTGTCCAGGCATCTATGTCCTGCCTG...CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCACAGGCAGGACATAGATaGCTGGACAGCCATGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSQAGHR*LDSHVV Trigger: AACCACATGGCTGTCCAGGCATCTATGTCCTGCCTG...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAAGTGTTGCCTCTGTCTaGTCTGGAAGGAGTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSSVASV*SGRSQR Trigger: CCTCTGACTCCTTCCAGAGCAGACAGAGGCAACACT...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGGGCTGTGCCAAGTGTTaGCTCTGTCTGCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMGCAKC*LCLLWK Trigger: CTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCC...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCAAAGGTACAGGCCCTGTaGAAAAGCACTGCAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LLRCVAHTSDPALLWIIAKVQAL*KSTAVK Trigger: TTTAACTGCAGTGCTTTTCCACAGGGCCTGTACCTT...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR TCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAAAGTGTATACAGGATTaGAACTGTCCCCAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSKCIQD*NCPQGL Trigger: CAGCCCCTGGGGACAGTTTCAATCCTGTATACACTT...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCACAGGACATAGATGCCTaGACAGCCATGTGGTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSQDIDA*TAMWFV Trigger: GACAAACCACATGGCTGTCCAGGCATCTATGTCCTG...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGAAGATCAATTCATTCTaGCCCCCTCAGAATTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: SFRLLLQEVRTKLKVASEKINSF*PPQNFN Trigger: GTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTT...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAAAAGCTGATCTGTTCTaGAAAAGGCAGACCCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSKADLF*KRQTQA Trigger: AGCTTGGGTCTGCCTTTTGCAGAACAGATCAGCTTT...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGCACACAGGCTCCATATaGCTGCTGTTCAGATGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMHTGSI*LLFRWN Trigger: ATTCCATCTGAACAGCAGCCATATGGAGCCTGTGTG...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CCA 72 bp | CCTGACCTGGGAATCTCAGGGGGATACGGGGGCCCATaGGAGAGATGTAGGACACCCAGCCCAGTTCTCATT | + |
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Preference number: 3 (lower is better) Translates to: PDLGISGGYGGP*ERCRTPSPVLI Trigger: AATGAGAACTGGGCTGGGTGTCCTACATCTCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CAA 90 bp | ATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGGGGCCCATGGGAGAGAGAGGGTCTGCGCAGGTaGGAAGCTGGGAAATGTAGT | + |
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Preference number: 3 (lower is better) Translates to: MGIPDLGISGGYGGPWEREGLRR*EAGKCS Trigger: ACTACATTTCCCAGCTTCCAACCTGCGCAGACCCTC...TCTCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR GCA 72 bp | GGTTGTTGGATGGCTGTGCCAAGTGTTGCCTCTGTCTaGTCTGGAAGGAGTCAGAGGTCTGGGGGCCAGACT | + |
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Preference number: 3 (lower is better) Translates to: GCWMAVPSVASV*SGRSQRSGGQT Trigger: AGTCTGGCCCCCAGACCTCTGACTCCTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CCA 72 bp | CTGACCACTGACTCCACAAAGGCTCTAGGGCGTGTGTaGCACTCACGGCCTGTGTGGCACTCACGTGCTAAT | + |
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Preference number: 3 (lower is better) Translates to: LTTDSTKALGRV*HSRPVWHSRAN Trigger: ATTAGCACGTGAGTGCCACACAGGCCGTGAGTGCCACACACGCCCTAGAGCCTTTGTGGAGTCAGTGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CCA 72 bp | AAGCTCTCCCAGCAAGGCAGGCAGGACATAGATGCCTaGACAGCCATGTGGTTTGTCAAGGCTAGGTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: KLSQQGRQDIDA*TAMWFVKARSA Trigger: GGCTGACCTAGCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGGGAGAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CCA 72 bp | GAGAGCGGGCCCACGAGCCTGATGTCAATAGTGAGCTaGTCTCAAAACCCTTGTGGCCACTGTGTAAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: ESGPTSLMSIVS*SQNPCGHCVRE Trigger: CTCCCTTACACAGTGGCCACAAGGGTTTTGAGACCAGCTCACTATTGACATCAGGCTCGTGGGCCCGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGGACATAGAGAGGGTCTGCGCAGGTaGGAAGCTGGGAAATGTAGT | + |
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Preference number: 3 (lower is better) Translates to: LFCKRQTQALPARQAGHREGLRR*EAGKCS Trigger: ACTACATTTCCCAGCTTCCAACCTGCGCAGACCCTC...TCTATGTCCTGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGGACATAGAGGACAGCCATGTGGTTaGTCAAGGCTAGGTCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LFCKRQTQALPARQAGHRGQPCG*SRLGQP Trigger: TGGCTGACCTAGCCTTGACAAACCACATGGCTGTCC...TCTATGTCCTGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR GCA 72 bp | AGGAATGTGAGGTTGTTGGATGGCTGTGCCAAGTGTTaGCTCTGTCTGCTCTGGAAGGAGTCAGAGGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: RNVRLLDGCAKC*LCLLWKESEVW Trigger: CCAGACCTCTGACTCCTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CCA 72 bp | GCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATaGCTGTGCCAAGTGTTGCCTCTGTCTGCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AALLCEECEVVG*LCQVLPLSALE Trigger: TTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACAGGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR CCA 72 bp | CTGCTGTGCTCAGTCACAGATGAACAGCACAGACCGTaGGGACGAGTCACCATGATAACAGCACTGAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLCSVTDEQHRP*GRVTMITALNP Trigger: TGGGTTCAGTGCTGTTATCATGGTGACTCGTCCCCACGGTCTGTGCTGTTCATCTGTGACTGAGCACAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGTGGCTGTGCCAAGTGTaGCCTCTGTCTGCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SFRLLLQEVRTKLKVASEWLCQV*PLSALE Trigger: TTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCA...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTGGGGCTGCTGCCCTGTaGTGTGAGGAATGTGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSGAAAL*CEECEV Trigger: AACCTCACATTCCTCACACAACAGGGCAGCAGCCCC...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR GCA 72 bp | CTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGCTGTaGCAAGTGTTGCCTCTGTCTGCTCTGGAAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLCEECEVVGWL*QVLPLSALEGV Trigger: GACTCCTTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR GCA 72 bp | TCACGGCCTGTGTGGCACTCACGTGCTAATGTTACTTaGATTACATGGCTCCATGCATCTCGCACACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRPVWHSRANVT*ITWLHASRTQA Trigger: AGCCTGTGTGCGAGATGCATGGAGCCATGTAATGCAAGTAACATTAGCACGTGAGTGCCACACAGGCCGTGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGGTGAGGAATGTGAGGTaGTTGGATGGCTGTGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SFRLLLQEVRTKLKVASEVRNVR*LDGCAK Trigger: CTTGGCACAGCCATCCAACAACCTCACATTCCTCAC...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGAGGAATGTGAGGTTGTaGGATGGCTGTGCCAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SFRLLLQEVRTKLKVASERNVRL*DGCAKC Trigger: ACACTTGGCACAGCCATCCAACAACCTCACATTCCT...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR TCA 72 bp | CCTCAGAATTTCAACAGACTGATTTATGGGAATTCCTaGCCTGGGAATCTCAGGGGGATACGGGGGCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: PQNFNRLIYGNS*PGNLRGIRGPM Trigger: CATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAATTCTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR TCA 72 bp | GTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTaGGATGCGTGGCACACACTTCAGACCCTGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VAAASRFVNTCF*DAWHTLQTLLS Trigger: GGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR CCA 72 bp | GAATTTCAACAGACTGATTTATGGGAATTCCTGACCTaGGAATCTCAGGGGGATACGGGGGCCCATGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: EFQQTDLWEFLT*ESQGDTGAHGR Trigger: TCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCATGGCTGTGCCAAGTGTaGCCTCTGTCTGCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSWLCQV*PLSALE Trigger: TTCCAGAGCAGACAGAGGCAACACTTGGCACAGCCA...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGGAGGGTCTGCGCAGGTaGGAAGCTGGGAAATGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMEGLRR*EAGKCS Trigger: ACTACATTTCCCAGCTTCCAACCTGCGCAGACCCTC...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGCTGGTCTCAAAACCCTaGTGGCCACTGTGTAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMLVSKP*WPLCKG Trigger: TCCCTTACACAGTGGCCACAAGGGTTTTGAGACCAG...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGAAAAGCAAGCTTGCCTaGCCCACCCATAGCAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMKSKLA*PTHSKA Trigger: AGCTTTGCTATGGGTGGGCAAGGCAAGCTTGCTTTT...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAAAAGTGTATACAGGATaGAAACTGTCCCCAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSKVYTG*KLSPGA Trigger: AGCCCCTGGGGACAGTTTCAATCCTGTATACACTTT...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR CCA 72 bp | ATTCTGACCCCCTCAGAATTTCAACAGACTGATTTATaGGAATTCCTGACCTGGGAATCTCAGGGGGATACG | + |
|
Preference number: 3 (lower is better) Translates to: ILTPSEFQQTDL*EFLTWESQGDT Trigger: CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAATTCTGAGGGGGTCAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR TCA 72 bp | TCAATTCATTCTGACCCCCTCAGAATTTCAACAGACTaGTTTATGGGAATTCCTGACCTGGGAATCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SIHSDPLRISTD*FMGIPDLGISG Trigger: CCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAATTCTGAGGGGGTCAGAATGAATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACAGGACAGCCATGTGGTTaGTCAAGGCTAGGTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ISVSKGRSIHSDPLRISTGQPCG*SRLGQP Trigger: TGGCTGACCTAGCCTTGACAAACCACATGGCTGTCC...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR CCA 72 bp | TTACGTGAAAACTCCATGTGTTCTAGATCAGTCTGGTaGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRENSMCSRSVW*QLLLDLSTLAF Trigger: AAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCTAGAACACATGGAGTTTTCACGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR CCA 72 bp | AATTTACGTGAAAACTCCATGTGTTCTAGATCAGTCTaGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NLRENSMCSRSV*WQLLLDLSTLA Trigger: AGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCTAGAACACATGGAGTTTTCACGTAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR TCA 72 bp | ATTTATTTCAGTATCAAAAGGAAGATCAATTCATTCTaGCCCCCTCAGAATTTCAACAGACTGATTTATGGG | + |
|
Preference number: 3 (lower is better) Translates to: IYFSIKRKINSF*PPQNFNRLIYG Trigger: CCCATAAATCAGTCTGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAATAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTGCCGGCACGTTGGGGTaGACCATGGAGGCCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKSLRVCAGAGTLG*TMEAPA Trigger: AGCCGGGGCCTCCATGGTCCACCCCAACGTGCCGGC...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTGGCCCCGGCTGCAGCTaGATATGCTGTGCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKSLRVCAGGPGCS*ICCAAR Trigger: ACGGGCAGCACAGCATATGCAGCTGCAGCCGGGGCC...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTCTTCAGCTCGACCCCTaGAGGGACCACGATAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKSLRVCAGLQLDP*RDHDRP Trigger: CGGCCTATCGTGGTCCCTGCAGGGGTCGAGCTGAAG...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTGGTCGCACACACAGATaGAGGGCAGCGGGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKSLRVCAGGRTHR*RAAGSR Trigger: CCTGCTACCCGCTGCCCTCCATCTGTGTGTGCGACC...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTCAGCTGCATATGCTGTaGTGCCCGTCGGGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKSLRVCAGQLHML*CPSGWT Trigger: TGTCCACCCCGACGGGCAGCACAGCATATGCAGCTG...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGCTTCAGCTCGACCCCTaGAGGGACCACGATAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSPGAAALLCEECEVVGWLQLDP*RDHDRP Trigger: CGGCCTATCGTGGTCCCTGCAGGGGTCGAGCTGAAG...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTAGGCGTTGGGGTGGACCATaGAGGCCCCGGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGRQDIDAWTAMWFVKARRWGGP*RPRLQL Trigger: CAGCTGCAGCCGGGGCCTCCATGGTCCACCCCAACG...CCTAGCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGCACGATAGGCCGGAATaGCAGCGAGTGGGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPGAAALLCEECEVVGWHDRPE*QRVGAD Trigger: ATCTGCCCCCACTCGCTGTCATTCCGGCCTATCGTG...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGGGGCCCATGGGAGAGACCCAGGGATCCAAGGTaGAAGGCCATGACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MGIPDLGISGGYGGPWERPRDPR*KAMTGG Trigger: GCCTCCTGTCATGGCCTTCCACCTTGGATCCCTGGG...TCTCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTCGGAATGACAGCGAGTaGGGGCAGATGGGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKSLRVCAGRNDSE*GQMGVT Trigger: GGTTACACCCATCTGCCCCCACTCGCTGTCATTCCG...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCCAAGGTGGAAGGCCATaGCAGGAGGCACACTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PARQAGHRCLDSHVVCQGQGGRP*QEAHCP Trigger: AGGGCAGTGTGCCTCCTGTCATGGCCTTCCACCTTG...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTATGTGCATGATGGTCTaGGGGTTCTGCAGCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKSLRVCAGMCMMV*GFCSTQ Trigger: CTGCGTGCTGCAGAACCCGCAGACCATCATGCACAT...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCCAGCTGCATATGCTGTaGTGCCCGTCGGGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PARQAGHRCLDSHVVCQGQLHML*CPSGWT Trigger: TGTCCACCCCGACGGGCAGCACAGCATATGCAGCTG...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGGGCCCCGGCTGCAGCTaGATATGCTGTGCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGGQTERDLAISRNTKSKGPGCS*ICCAAR Trigger: ACGGGCAGCACAGCATATGCAGCTGCAGCCGGGGCC...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCCCCAGGGATCCAAGGTaGAAGGCCATGACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PARQAGHRCLDSHVVCQGPRDPR*KAMTGG Trigger: GCCTCCTGTCATGGCCTTCCACCTTGGATCCCTGGG...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTAGGTGCTGCCCGTCGGGGTaGACACGATCACTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: QGRQDIDAWTAMWFVKARCCPSG*TRSLHR Trigger: GCGATGGAGTGATCGTGTCCACCCCGACGGGCAGCA...CCTAGCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGCGTTGGGGTGGACCATaGAGGCCCCGGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASERWGGP*RPRLQL Trigger: CAGCTGCAGCCGGGGCCTCCATGGTCCACCCCAACG...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTGCCGGCACGTTGGGGTaGACCATGGAGGCCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSAGTLG*TMEAPA Trigger: AGCCGGGGCCTCCATGGTCCACCCCAACGTGCCGGC...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGCGGAATGACAGCGAGTaGGGGCAGATGGGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSPGAAALLCEECEVVGWRNDSE*GQMGVT Trigger: GGTTACACCCATCTGCCCCCACTCGCTGTCATTCCG...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTAGGGCTCTTTCACCACCCTaGCCTTCAGCCGGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGRQDIDAWTAMWFVKARALSPP*PSAGSS Trigger: TGAGGAGCCGGCTGAAGGTCAGGGTGGTGAAAGAGC...CCTAGCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCGCAGGGTCCTGGATGTaGATGATGGTCTGCGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PARQAGHRCLDSHVVCQGAGSWM*MMVCGF Trigger: GAACCCGCAGACCATCATGCACATCCAGGACCCTGC...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCCGGAATGACAGCGAGTaGGGGCAGATGGGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: PARQAGHRCLDSHVVCQGRNDSE*GQMGVT Trigger: GGTTACACCCATCTGCCCCCACTCGCTGTCATTCCG...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGATCTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGAGAGCGGGTCCTCCTaGACTCCTTGGTGCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KADLFCKRQTQALPARQAESGSS*TPWCCL Trigger: TAGGCAGCACCAAGGAGTTCAGGAGGACCCGCTCTC...TGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAGATCAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | ATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGGGGCCCATGGGAGAGAAGCTCTTTGAAGGGCTaGAGTAAGCTGGCATCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MGIPDLGISGGYGGPWERSSLKG*SKLASR Trigger: CCGAGATGCCAGCTTACTGCAGCCCTTCAAAGAGCT...TCTCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGCTTCAGCTCGACCCCTaGAGGGACCACGATAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASELQLDP*RDHDRP Trigger: CGGCCTATCGTGGTCCCTGCAGGGGTCGAGCTGAAG...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTTTTCGAACATTCCAGTaGAGACACTGGGCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKSLRVCAGFRTFQ*RHWARL Trigger: GAGCCTTGCCCAGTGTCTGCACTGGAATGTTCGAAA...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGGGTAGACATCCACGTTaGACAGATATGAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPGAAALLCEECEVVGWGRHPR*TDMRRG Trigger: GCCCCTCCTCATATCTGTCCAACGTGGATGTCTACC...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCATGCTGCCCGTCGGGGTaGACACGATCACTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLRCVAHTSDPALLWIIACCPSG*TRSLHR Trigger: GCGATGGAGTGATCGTGTCCACCCCGACGGGCAGCA...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGGGTCGCACACACAGATaGAGGGCAGCGGGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASEGRTHR*RAAGSR Trigger: CCTGCTACCCGCTGCCCTCCATCTGTGTGTGCGACC...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR CAA 72 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTaGAGGGTCTGCGCAGGTTGGAAGCTGGGAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QQESKRRKAPKS*RVCAGWKLGNV Trigger: TACATTTCCCAGCTTCCAACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR CAA 72 bp | GGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTaGGATGGCTGTGCCAAGTGTTGCCTCTGTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLPCCVRNVRL*DGCAKCCLCLL Trigger: GAGCAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| 3UTR CAA 72 bp | CAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTaGTTGGATGGCTGTGCCAAGTGTTGCCTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLLPCCVRNVR*LDGCAKCCLCL Trigger: CAGACAGAGGCAACACTTGGCACAGCCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | ATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGGGGCCCATGGGAGAGAATATGCAGAGCTCTTTaGAGGGCTGCAGTAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MGIPDLGISGGYGGPWERICRAL*RAAVSW Trigger: CCAGCTTACTGCAGCCCTTCAAAGAGCTCTGCATAT...TCTCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCACAAGGTGGAAGGCCATaGCAGGAGGCACACTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCVAHTSDPALLWIIAQGGRP*QEAHCP Trigger: AGGGCAGTGTGCCTCCTGTCATGGCCTTCCACCTTG...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGGGAAGTTCTCAAAGTTaGAGGGGGTCAGAAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPGAAALLCEECEVVGWGSSQS*RGSESP Trigger: TGGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCC...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | ATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGGGGCCCATGGGAGAGAGGAAGTTCTCAAAGTTaGAGGGGGTCAGAAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MGIPDLGISGGYGGPWERGSSQS*RGSESP Trigger: TGGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCC...TCTCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGGACATAGACACGTTGGACAGATATaGGGAGGGGCCTCTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFCKRQTQALPARQAGHRHVGQI*GGASVD Trigger: ATCGACAGAGGCCCCTCCTCATATCTGTCCAACGTG...TCTATGTCCTGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGCTGCATATGCTGTGCTaGCCGTCGGGGTGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASELHMLC*PSGWTR Trigger: TCGTGTCCACCCCGACGGGCAGCACAGCATATGCAG...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGCAGCTGCATATGCTGTaGTGCCCGTCGGGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASEQLHML*CPSGWT Trigger: TGTCCACCCCGACGGGCAGCACAGCATATGCAGCTG...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCACATGGAGGCCCCGGCTaGAGCTGCATATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCVAHTSDPALLWIIAHGGPG*SCICCA Trigger: AGCACAGCATATGCAGCTGCAGCCGGGGCCTCCATG...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | ATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGGGGCCCATGGGAGAGATCACTGAGGCCGTTGTaGATGGCTGTCTTCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MGIPDLGISGGYGGPWERSLRPL*MAVFLS Trigger: AGACAAGAAGACAGCCATCCACAACGGCCTCAGTGA...TCTCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS-3UTR CCA 90 bp | ATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGGGGCCCATGGGAGAGACTGATGCTGTCTCCATaGCGGATTTCCTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MGIPDLGISGGYGGPWERLMLSP*RISCLF Trigger: GAAGAGACAGGAAATCCGCCATGGAGACAGCATCAG...TCTCTCCCATGGGCCCCCGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS-3UTR CCA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGCTGATGCTGTCTCCATaGCGGATTTCCTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPGAAALLCEECEVVGWLMLSP*RISCLF Trigger: GAAGAGACAGGAAATCCGCCATGGAGACAGCATCAG...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGCACGTTGGACAGATATaGGGAGGGGCCTCTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SGGQTERDLAISRNTKSKHVGQI*GGASVD Trigger: ATCGACAGAGGCCCCTCCTCATATCTGTCCAACGTG...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGGACATAGAGTTCCTGGCTTCCGGTaGCAGCATAATCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFCKRQTQALPARQAGHRVPGFR*QHNLQL Trigger: GAGCTGAAGATTATGCTGTCACCGGAAGCCAGGAAC...TCTATGTCCTGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTTTCGAACATTCCAGTaGAGACACTGGGCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PARQAGHRCLDSHVVCQGFRTFQ*RHWARL Trigger: GAGCCTTGCCCAGTGTCTGCACTGGAATGTTCGAAA...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTCACTGAGGCCGTTGTaGATGGCTGTCTTCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PARQAGHRCLDSHVVCQGSLRPL*MAVFLS Trigger: AGACAAGAAGACAGCCATCCACAACGGCCTCAGTGA...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTATGGTCTGCGGGTTCTaGAGCACGCAGGCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSMVCGF*STQAFG Trigger: ACCAAAGGCCTGCGTGCTGCAGAACCCGCAGACCAT...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCAATGTGCATGATGGTCTaGGGGTTCTGCAGCACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCVAHTSDPALLWIIAMCMMV*GFCSTQ Trigger: CTGCGTGCTGCAGAACCCGCAGACCATCATGCACAT...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGAGCTCTTTGAAGGGCTaGAGTAAGCTGGCATCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGGQTERDLAISRNTKSKSSLKG*SKLASR Trigger: CCGAGATGCCAGCTTACTGCAGCCCTTCAAAGAGCT...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGGGCCCCGGCTGCAGCTaGATATGCTGTGCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMGPGCS*ICCAAR Trigger: ACGGGCAGCACAGCATATGCAGCTGCAGCCGGGGCC...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGATCTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGGTAGACATCCACGTTaGACAGATATGAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KADLFCKRQTQALPARQAGRHPR*TDMRRG Trigger: GCCCCTCCTCATATCTGTCCAACGTGGATGTCTACC...TGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAGATCAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | TTTCAACAGACTGATTTATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGGTCGCACACACAGATaGAGGGCAGCGGGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQQTDLWEFLTWESQGDTGRTHR*RAAGSR Trigger: CCTGCTACCCGCTGCCCTCCATCTGTGTGTGCGACC...CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGTCGGCACTCAGCTCCTaGCTCAGGTTCATCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGGQTERDLAISRNTKSKSALSS*LRFIFS Trigger: AGAAAAGATGAACCTGAGTCAGGAGCTGAGTGCCGA...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TTTCAACAGACTGATTTATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGCAAGGTGGAAGGCCATaGCAGGAGGCACACTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FQQTDLWEFLTWESQGDTQGGRP*QEAHCP Trigger: AGGGCAGTGTGCCTCCTGTCATGGCCTTCCACCTTG...CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCACACGATAGGCCGGAATaGCAGCGAGTGGGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSHDRPE*QRVGAD Trigger: ATCTGCCCCCACTCGCTGTCATTCCGGCCTATCGTG...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGGTTCCTGGCTTCCGGTaGCAGCATAATCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASEVPGFR*QHNLQL Trigger: GAGCTGAAGATTATGCTGTCACCGGAAGCCAGGAAC...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCAGTTCCTGGCTTCCGGTaGCAGCATAATCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRCVAHTSDPALLWIIAVPGFR*QHNLQL Trigger: GAGCTGAAGATTATGCTGTCACCGGAAGCCAGGAAC...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGAGGCATAGAGCAAGGTaGCATCTCCTCCAAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SGGQTERDLAISRNTKSKRHRAR*HLLQGI Trigger: TATGCCTTGGAGGAGATGGCACCTTGCTCTATGCCT...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCACTGCATATGCTGTGCTaGCCGTCGGGGTGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSLHMLC*PSGWTR Trigger: TCGTGTCCACCCCGACGGGCAGCACAGCATATGCAG...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TTTCAACAGACTGATTTATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGCATGGAGGCCCCGGCTaGAGCTGCATATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FQQTDLWEFLTWESQGDTHGGPG*SCICCA Trigger: AGCACAGCATATGCAGCTGCAGCCGGGGCCTCCATG...CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGATCTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCATTTCGAACATTCCAGTaGAGACACTGGGCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KADLFCKRQTQALPARQAFRTFQ*RHWARL Trigger: GAGCCTTGCCCAGTGTCTGCACTGGAATGTTCGAAA...TGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAGATCAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCACCCAGGGATCCAAGGTaGAAGGCCATGACAGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSPRDPR*KAMTGG Trigger: GCCTCCTGTCATGGCCTTCCACCTTGGATCCCTGGG...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGGGTAGACATCCACGTTaGACAGATATGAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASEGRHPR*TDMRRG Trigger: GCCCCTCCTCATATCTGTCCAACGTGGATGTCTACC...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGTCGGCACTCAGCTCCTaGCTCAGGTTCATCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASESALSS*LRFIFS Trigger: AGAAAAGATGAACCTGAGTCAGGAGCTGAGTGCCGA...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGGAGAGCGGGTCCTCCTaGACTCCTTGGTGCTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMESGSS*TPWCCL Trigger: TAGGCAGCACCAAGGAGTTCAGGAGGACCCGCTCTC...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGGGAAGTTCTCAAAGTTaGAGGGGGTCAGAAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASEGSSQS*RGSESP Trigger: TGGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCC...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAATGGTCTGCGGGTTCTaGAGCACGCAGGCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSMVCGF*STQAFG Trigger: ACCAAAGGCCTGCGTGCTGCAGAACCCGCAGACCAT...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGGACATAGAAGTCTTCACGGAACGTaGAGAACTTCTTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFCKRQTQALPARQAGHRSLHGT*RTSSSL Trigger: CAGTGAAGAAGAAGTTCTGCACGTTCCGTGAAGACT...TCTATGTCCTGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGAGGCATAGAGCAAGGTaGCATCTCCTCCAAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASERHRAR*HLLQGI Trigger: TATGCCTTGGAGGAGATGGCACCTTGCTCTATGCCT...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGATCTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGTCCTCCTCATCCTCTaGAAAGTGAGCTTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KADLFCKRQTQALPARQAVLLIL*KVSLLL Trigger: AAGAAGCAAGCTCACTTTCCAGAGGATGAGGAGGAC...TGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAGATCAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTATATGCAGAGCTCTTTaGAGGGCTGCAGTAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSICRAL*RAAVSW Trigger: CCAGCTTACTGCAGCCCTTCAAAGAGCTCTGCATAT...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGTCATCCTCTGGAAAGTaGGCTTGCTTCTTTCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SGGQTERDLAISRNTKSKSSSGK*ACFFRT Trigger: TGTTCGAAAGAAGCAAGCTCACTTTCCAGAGGATGA...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACAGCCGGCACGTTGGGGTaGACCATGGAGGCCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISVSKGRSIHSDPLRISTAGTLG*TMEAPA Trigger: AGCCGGGGCCTCCATGGTCCACCCCAACGTGCCGGC...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCAGTCCTCCTCATCCTCTaGAAAGTGAGCTTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCVAHTSDPALLWIIAVLLIL*KVSLLL Trigger: AAGAAGCAAGCTCACTTTCCAGAGGATGAGGAGGAC...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGTCATCCTCTGGAAAGTaGGCTTGCTTCTTTCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASESSSGK*ACFFRT Trigger: TGTTCGAAAGAAGCAAGCTCACTTTCCAGAGGATGA...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCAAGTCTTCACGGAACGTaGAGAACTTCTTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCVAHTSDPALLWIIASLHGT*RTSSSL Trigger: CAGTGAAGAAGAAGTTCTGCACGTTCCGTGAAGACT...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACACGTTGGGGTGGACCATaGAGGCCCCGGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVSKGRSIHSDPLRISTRWGGP*RPRLQL Trigger: CAGCTGCAGCCGGGGCCTCCATGGTCCACCCCAACG...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTGTCCTCCTCATCCTCTaGAAAGTGAGCTTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSVLLIL*KVSLLL Trigger: AAGAAGCAAGCTCACTTTCCAGAGGATGAGGAGGAC...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGTTCCATGTCAACCGTTaGCTTGCAGGGTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMFHVNR*LAGSWM Trigger: CATCCAGGACCCTGCAAGTCAACGGTTGACATGGAA...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCATCCTCTGGAAAGTaGGCTTGCTTCTTTCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSSSSGK*ACFFRT Trigger: TGTTCGAAAGAAGCAAGCTCACTTTCCAGAGGATGA...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGAGCTCTTTGAAGGGCTaGAGTAAGCTGGCATCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMSSLKG*SKLASR Trigger: CCGAGATGCCAGCTTACTGCAGCCCTTCAAAGAGCT...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAAGGCATAGAGCAAGGTaGCATCTCCTCCAAGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSRHRAR*HLLQGI Trigger: TATGCCTTGGAGGAGATGGCACCTTGCTCTATGCCT...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCACTTCATTTAAGACCTaGTATTGCATAGCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PARQAGHRCLDSHVVCQGTSFKT*YCIACF Trigger: AAAACAGGCTATGCAATACCAGGTCTTAAATGAAGT...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACATGCTGCCCGTCGGGGTaGACACGATCACTCCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVSKGRSIHSDPLRISTCCPSG*TRSLHR Trigger: GCGATGGAGTGATCGTGTCCACCCCGACGGGCAGCA...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGCTGATGCTGTCTCCATaGCGGATTTCCTGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMLMLSP*RISCLF Trigger: GAAGAGACAGGAAATCCGCCATGGAGACAGCATCAG...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| 3UTR CAA 72 bp | TGTTCTAGATCAGTCTGGTGGCAGCTGCTTCTAGATTaGTCAACACTTGCTTTTGAGATGCGTGGCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: CSRSVWWQLLLD*STLAFEMRGTH Trigger: GTGTGTGCCACGCATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCTAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS-3UTR TCA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACAGCTCTTTCACCACCCTaGCCTTCAGCCGGCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISVSKGRSIHSDPLRISTALSPP*PSAGSS Trigger: TGAGGAGCCGGCTGAAGGTCAGGGTGGTGAAAGAGC...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS-3UTR TCA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACACACGATAGGCCGGAATaGCAGCGAGTGGGGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISVSKGRSIHSDPLRISTHDRPE*QRVGAD Trigger: ATCTGCCCCCACTCGCTGTCATTCCGGCCTATCGTG...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR GCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGAGTCTTCACGGAACGTaGAGAACTTCTTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMSLHGT*RTSSSL Trigger: CAGTGAAGAAGAAGTTCTGCACGTTCCGTGAAGACT...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS-3UTR CCA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGACTTCATTTAAGACCTaGTATTGCATAGCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFRLLLQEVRTKLKVASETSFKT*YCIACF Trigger: AAAACAGGCTATGCAATACCAGGTCTTAAATGAAGT...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACACACGTTGGACAGATATaGGGAGGGGCCTCTGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISVSKGRSIHSDPLRISTHVGQI*GGASVD Trigger: ATCGACAGAGGCCCCTCCTCATATCTGTCCAACGTG...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACAATATGCAGAGCTCTTTaGAGGGCTGCAGTAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVSKGRSIHSDPLRISTICRAL*RAAVSW Trigger: CCAGCTTACTGCAGCCCTTCAAAGAGCTCTGCATAT...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CCA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGACTTCATTTAAGACCTaGTATTGCATAGCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMTSFKT*YCIACF Trigger: AAAACAGGCTATGCAATACCAGGTCTTAAATGAAGT...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCGACAGGCTCCGAGACTaGGCCCGGCCCCGGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PARQAGHRCLDSHVVCQGDRLRD*ARPRIG Trigger: CCCTATCCGGGGCCGGGCCAAGTCTCGGAGCCTGTC...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS TCA 90 bp | CAAATGTTGTCACTGGGCACGGTCCATGGAGAGAGCGGGTCCTCCTaGACTCCTTGGTGCTGCCTAGGGCAGGTGAGGCTGACAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QMLSLGTVHGESGSS*TPWCCLGQVRLTGS Trigger: GGAGCCTGTCAGCCTCACCTGCCCTAGGCAGCACCAAGGAGTTCAGGAGGACCCGCTCTCTCCATGGACCGTGCCCAGTGACAACATTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 ENSMUST00000146080.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGGACAGGCTCCGAGACTaGGCCCGGCCCCGGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGGQTERDLAISRNTKSKDRLRD*ARPRIG Trigger: CCCTATCCGGGGCCGGGCCAAGTCTCGGAGCCTGTC...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS TCA 90 bp | CATAATCTTCAGCTCGACCCCTGCAGGGACCACGATAGGCCGGAATaGCAGCGAGTGGGGGCAGATGGGTGTAACCATGATGGCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HNLQLDPCRDHDRPE*QRVGADGCNHDGRH Trigger: GTGCCGGCCATCATGGTTACACCCATCTGCCCCCACTCGCTGTCATTCCGGCCTATCGTGGTCCCTGCAGGGGTCGAGCTGAAGATTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGGTCCTCCTGAACTCCTaGGTGCTGCCTAGGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSPGAAALLCEECEVVGWVLLNS*VLPRAG Trigger: ACCTGCCCTAGGCAGCACCAAGGAGTTCAGGAGGAC...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS CCA 90 bp | CTGGATGTGCATGATGGTCTGCGGGTTCTGCAGCACGCAGGCCTTTaGTCCAAATGTTGTCACTGGGCACGGTCCATGGAGAGAGCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDVHDGLRVLQHAGL*SKCCHWARSMERAG Trigger: ACCCGCTCTCTCCATGGACCGTGCCCAGTGACAACATTTGGACCAAAGGCCTGCGTGCTGCAGAACCCGCAGACCATCATGCACATCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGATGATGGCCGGCACGTaGGGGTGGACCATGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGGQTERDLAISRNTKSKMMAGT*GWTMEA Trigger: GGCCTCCATGGTCCACCCCAACGTGCCGGCCATCAT...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCAGGGGCTGCTGCCCTGTTGTGTGAGGAATGTGAGGTTGTTGGATGGTGGATGGCTGTCTTCTaGTCTCTGGGCTCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LSPGAAALLCEECEVVGWWMAVF*SLGSFT Trigger: GGTGAAAGAGCCCAGAGACAAGAAGACAGCCATCCA...CCATCCAACAACCTCACATTCCTCACACAACAGGGCAGCAGCCCCTGGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTATGATGGCCGGCACGTaGGGGTGGACCATGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSMMAGT*GWTMEA Trigger: GGCCTCCATGGTCCACCCCAACGTGCCGGCCATCAT...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGAGAGCAAGAGAAGGAAGGCCCCCAAGAGCTTGAGGGTCTGCGCAGGTTATATGCAGAGCTCTTaGAAGGGCTGCAGTAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQESKRRKAPKSLRVCAGYMQSS*KGCSKL Trigger: CAGCTTACTGCAGCCCTTCAAAGAGCTCTGCATATA...ACCTGCGCAGACCCTCAAGCTCTTGGGGGCCTTCCTTCTCTTGCTCTCCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS TCA 90 bp | ACTTGTTCCATGTCAACCGTTGACTTGCAGGGTCCTGGATGTGCATaGTGGTCTGCGGGTTCTGCAGCACGCAGGCCTTTGGTCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TCSMSTVDLQGPGCA*WSAGSAARRPLVQM Trigger: CATTTGGACCAAAGGCCTGCGTGCTGCAGAACCCGCAGACCATCATGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS TCA 90 bp | TCCAAGGTGGAAGGCCATGACAGGAGGCACACTGCCCTGGAAAAGTaGGGAGGCATAGAGCAAGGTGCCATCTCCTCCAAGGCATATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKVEGHDRRHTALEK*GGIEQGAISSKAYD Trigger: ATCATATGCCTTGGAGGAGATGGCACCTTGCTCTATGCCTCCTCACTTTTCCAGGGCAGTGTGCCTCCTGTCATGGCCTTCCACCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS GCA 90 bp | GACAAGCACACTCTTGGGAGACTTGTTCCATGTCAACCGTTGACTTaGAGGGTCCTGGATGTGCCAGACTCCGGGTTCCAGAGAATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DKHTLGRLVPCQPLT*RVLDVPDSGFQRMW Trigger: CCACATTCTCTGGAACCCGGAGTCTGGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGTCTCCCAAGAGTGTGCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105612.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTAGGTGGATGGCTGTCTTCTaGTCTCTGGGCTCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QGRQDIDAWTAMWFVKARWMAVF*SLGSFT Trigger: GGTGAAAGAGCCCAGAGACAAGAAGACAGCCATCCA...CCTAGCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TTTCAACAGACTGATTTATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGATGATGGCCGGCACGTaGGGGTGGACCATGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQQTDLWEFLTWESQGDTMMAGT*GWTMEA Trigger: GGCCTCCATGGTCCACCCCAACGTGCCGGCCATCAT...CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGATCTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCACCTTTGGTCCAAATGTaGTCACTGGGCACGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KADLFCKRQTQALPARQAPLVQM*SLGTVH Trigger: ATGGACCGTGCCCAGTGACAACATTTGGACCAAAGG...TGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAGATCAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTATATGCAGAGCTCTTaGAAGGGCTGCAGTAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PARQAGHRCLDSHVVCQGYMQSS*KGCSKL Trigger: CAGCTTACTGCAGCCCTTCAAAGAGCTCTGCATATA...GCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCAGGACATAGATGGAAGTTCTCAAAGTaGAAGGGGGTCAGAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFCKRQTQALPARQAGHRWKFSK*KGVRKP Trigger: GGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCCA...TCTATGTCCTGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS TCA 90 bp | TTCAGCCGGCTCCTCAGGATGACAGCGGCATTCCCCTCTATCACCTaGTTCACTTGGGATTGGAAGTTCTCAAAGTTGAAGGGGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSRLLRMTAAFPSIT*FTWDWKFSKLKGVR Trigger: TCTGACCCCCTTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATAGAGGGGAATGCCGCTGTCATCCTGAGGAGCCGGCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAGTCCTCCTGAACTCCTaGGTGCTGCCTAGGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSVLLNS*VLPRAG Trigger: ACCTGCCCTAGGCAGCACCAAGGAGTTCAGGAGGAC...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTAGGTATATGCAGAGCTCTTaGAAGGGCTGCAGTAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGRQDIDAWTAMWFVKARYMQSS*KGCSKL Trigger: CAGCTTACTGCAGCCCTTCAAAGAGCTCTGCATATA...CCTAGCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGATGACAAGCACACTCTaGGGAGACTTGTTCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGGQTERDLAISRNTKSKMTSTL*GDLFHV Trigger: GACATGGAACAAGTCTCCCAAGAGTGTGCTTGTCAT...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCATGGAAGTTCTCAAAGTaGAAGGGGGTCAGAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRCVAHTSDPALLWIIAWKFSK*KGVRKP Trigger: GGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCCA...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS CCA 90 bp | AGATATGAGGAGGGGCCTCTGTCGATCACCACTTCATTTAAGACCTaGTATTGCATAGCCTGTTTTCCGCCCTCTGTGTCCAGACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RYEEGPLSITTSFKT*YCIACFPPSVSRPF Trigger: AAATGGTCTGGACACAGAGGGCGGAAAACAGGCTATGCAATACCAGGTCTTAAATGAAGTGGTGATCGACAGAGGCCCCTCCTCATATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCAGCATCTCGGATCTTTTaGATGACAAGCACACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRCVAHTSDPALLWIIAASRIF*MTSTLL Trigger: CAAGAGTGTGCTTGTCATCAAAAAGATCCGAGATGC...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAGGCAGGACATAGATGCCTGGACAGCCATGTGGTTTGTCAAGGCTAGGCTGATTCACTTGGGATaGGAAGTTCTCAAAGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QGRQDIDAWTAMWFVKARLIHLG*EVLKVE Trigger: TTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAG...CCTAGCCTTGACAAACCACATGGCTGTCCAGGCATCTATGTCCTGCCTGCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CCCTGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTGCATCTCGGATCTTTTaGATGACAAGCACACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCPGHNVNTGQQAVPSKSASRIF*MTSTLL Trigger: CAAGAGTGTGCTTGTCATCAAAAAGATCCGAGATGC...AGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGATCTGTTCTGCAAAAGGCAGACCCAAGCTCTCCCAGCAAGGCAGGCATATCACCTGATTCACTaGGGATTGGAAGTTCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KADLFCKRQTQALPARQAYHLIH*GLEVLK Trigger: TTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATA...TGCCTGCCTTGCTGGGAGAGCTTGGGTCTGCCTTTTGCAGAACAGATCAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TCTGGGGGCCAGACTGAGAGGGACCTAGCCATCTCCAGAAACACAAAAAGCAAGTATCACCTGATTCACTaGGGATTGGAAGTTCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SGGQTERDLAISRNTKSKYHLIH*GLEVLK Trigger: TTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATA...CTTGCTTTTTGTGTTTCTGGAGATGGCTAGGTCCCTCTCAGTCTGGCCCCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGACACAATGTAAACACTGGACAACAGGCAGTCCCCTCTAAATCTTCAATGACAAGCACACTCTaGGGAGACTTGTTCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: CPGHNVNTGQQAVPSKSSMTSTL*GDLFHV Trigger: GACATGGAACAAGTCTCCCAAGAGTGTGCTTGTCAT...TGAAGATTTAGAGGGGACTGCCTGTTGTCCAGTGTTTACATTGTGTCCAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | AGATCAGTCTGGTGGCAGCTGCTTCTAGATTTGTCAACACTTGCTTTTGAGATGTGGAAGTTCTCAAAGTaGAAGGGGGTCAGAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSVWWQLLLDLSTLAFEMWKFSK*KGVRKP Trigger: GGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCCA...CATCTCAAAAGCAAGTGTTGACAAATCTAGAAGCAGCTGCCACCAGACTGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGCTGATTCACTTGGGATaGGAAGTTCTCAAAGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFRLLLQEVRTKLKVASELIHLG*EVLKVE Trigger: TTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAG...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAGATGCGTGGCACACACTTCAGACCCTGCTCTCCTCTGGATCATAGCACTGATTCACTTGGGATaGGAAGTTCTCAAAGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLRCVAHTSDPALLWIIALIHLG*EVLKVE Trigger: TTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAG...TGCTATGATCCAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TCCTTCCGACTCCTGCTGCAAGAGGTGAGGACAAAACTGAAAGTAGCTAGCGAGTATCACCTGATTCACTaGGGATTGGAAGTTCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SFRLLLQEVRTKLKVASEYHLIH*GLEVLK Trigger: TTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATA...CTCGCTAGCTACTTTCAGTTTTGTCCTCACCTCTTGCAGCAGGAGTCGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS GCA 90 bp | ATGTTGTTTTCCTCCATGAGGTATATGCAGAGCTCTTTGAAGGGCTaGAGTAAGCTGGCATCTCGGATCTTTTTGATGACAAGCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: MLFSSMRYMQSSLKG*SKLASRIFLMTSTL Trigger: GAGTGTGCTTGTCATCAAAAAGATCCGAGATGCCAGCTTACTGCAGCCCTTCAAAGAGCTCTGCATATACCTCATGGAGGAAAACAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | TTTCAACAGACTGATTTATGGGAATTCCTGACCTGGGAATCTCAGGGGGATACGGCATCTCGGATCTTTTaGATGACAAGCACACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQQTDLWEFLTWESQGDTASRIF*MTSTLL Trigger: CAAGAGTGTGCTTGTCATCAAAAAGATCCGAGATGC...CGTATCCCCCTGAGATTCCCAGGTCAGGAATTCCCATAAATCAGTCTGTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS CCA 90 bp | AATGTCATCATAGTCTTCACGGAACGTGCAGAACTTCTTCTTCACTaGTCCAAAGTTTTCATCACTCACTATAGCAGGGTCTTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NVIIVFTERAELLLH*SKVFITHYSRVFQN Trigger: GTTCTGGAAGACCCTGCTATAGTGAGTGATGAAAACTTTGGACCAGTGAAGAAGAAGTTCTGCACGTTCCGTGAAGACTATGATGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACATGGATGGCTGTCTTCTaGTCTCTGGGCTCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ISVSKGRSIHSDPLRISTWMAVF*SLGSFT Trigger: GGTGAAAGAGCCCAGAGACAAGAAGACAGCCATCCA...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS-3UTR CAA 90 bp | ATTTCAGTATCAAAAGGAAGATCAATTCATTCTGACCCCCTCAGAATTTCAACAATGACAAGCACACTCTaGGGAGACTTGTTCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISVSKGRSIHSDPLRISTMTSTL*GDLFHV Trigger: GACATGGAACAAGTCTCCCAAGAGTGTGCTTGTCAT...TGTTGAAATTCTGAGGGGGTCAGAATGAATTGATCTTCCTTTTGATACTGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS GCA 72 bp | CCATGGAGGCCCCGGCTGCAGCTGCATATGCTGTGCTaGCCGTCGGGGTGGACACGATCACTCCATCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PWRPRLQLHMLC*PSGWTRSLHRP Trigger: AGGGCGATGGAGTGATCGTGTCCACCCCGACGGGCAGCACAGCATATGCAGCTGCAGCCGGGGCCTCCATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS GCA 72 bp | GGACCATGGAGGCCCCGGCTGCAGCTGCATATGCTGTaGTGCCCGTCGGGGTGGACACGATCACTCCATCGC | + |
|
Preference number: 6 (lower is better) Translates to: GPWRPRLQLHML*CPSGWTRSLHR Trigger: GCGATGGAGTGATCGTGTCCACCCCGACGGGCAGCACAGCATATGCAGCTGCAGCCGGGGCCTCCATGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS TCA 72 bp | TCACTGGGCACGGTCCATGGAGAGAGCGGGTCCTCCTaGACTCCTTGGTGCTGCCTAGGGCAGGTGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLGTVHGESGSS*TPWCCLGQVRL Trigger: CAGCCTCACCTGCCCTAGGCAGCACCAAGGAGTTCAGGAGGACCCGCTCTCTCCATGGACCGTGCCCAGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 ENSMUST00000146080.8 |
||
| CDS CCA 72 bp | CCTGCAGGGACCACGATAGGCCGGAATGACAGCGAGTaGGGGCAGATGGGTGTAACCATGATGGCCGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: PAGTTIGRNDSE*GQMGVTMMAGT Trigger: CGTGCCGGCCATCATGGTTACACCCATCTGCCCCCACTCGCTGTCATTCCGGCCTATCGTGGTCCCTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS CCA 72 bp | CAGATGGGTGTAACCATGATGGCCGGCACGTTGGGGTaGACCATGGAGGCCCCGGCTGCAGCTGCATATGCT | + |
|
Preference number: 6 (lower is better) Translates to: QMGVTMMAGTLG*TMEAPAAAAYA Trigger: AGCATATGCAGCTGCAGCCGGGGCCTCCATGGTCCACCCCAACGTGCCGGCCATCATGGTTACACCCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS CAA 72 bp | GCGGGTTCTGCAGCACGCAGGCCTTTGGTCCAAATGTaGTCACTGGGCACGGTCCATGGAGAGAGCGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGSAARRPLVQM*SLGTVHGESGS Trigger: GGACCCGCTCTCTCCATGGACCGTGCCCAGTGACAACATTTGGACCAAAGGCCTGCGTGCTGCAGAACCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 ENSMUST00000146080.8 |
||
| CDS TCA 72 bp | CAGCTCGACCCCTGCAGGGACCACGATAGGCCGGAATaGCAGCGAGTGGGGGCAGATGGGTGTAACCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: QLDPCRDHDRPE*QRVGADGCNHD Trigger: ATCATGGTTACACCCATCTGCCCCCACTCGCTGTCATTCCGGCCTATCGTGGTCCCTGCAGGGGTCGAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS TCA 72 bp | GGGTCAGAAAGCCCAGGGATCCAAGGTGGAAGGCCATaGCAGGAGGCACACTGCCCTGGAAAAGTGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSESPGIQGGRP*QEAHCPGKVRR Trigger: CCTCCTCACTTTTCCAGGGCAGTGTGCCTCCTGTCATGGCCTTCCACCTTGGATCCCTGGGCTTTCTGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS CCA 72 bp | CTGCAGCACGCAGGCCTTTGGTCCAAATGTTGTCACTaGGCACGGTCCATGGAGAGAGCGGGTCCTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LQHAGLWSKCCH*ARSMERAGPPE Trigger: TTCAGGAGGACCCGCTCTCTCCATGGACCGTGCCCAGTGACAACATTTGGACCAAAGGCCTGCGTGCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 ENSMUST00000146080.8 |
||
| CDS CCA 72 bp | GCCTTTGGTCCAAATGTTGTCACTGGGCACGGTCCATaGAGAGAGCGGGTCCTCCTGAACTCCTTGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AFGPNVVTGHGP*RERVLLNSLVL Trigger: CAGCACCAAGGAGTTCAGGAGGACCCGCTCTCTCCATGGACCGTGCCCAGTGACAACATTTGGACCAAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 ENSMUST00000146080.8 |
||
| CDS CCA 72 bp | CATGATGGTCTGCGGGTTCTGCAGCACGCAGGCCTTTaGTCCAAATGTTGTCACTGGGCACGGTCCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HDGLRVLQHAGL*SKCCHWARSME Trigger: CTCCATGGACCGTGCCCAGTGACAACATTTGGACCAAAGGCCTGCGTGCTGCAGAACCCGCAGACCATCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS CAA 90 bp | GTGTCCAGACCATTTTCACTGAGGCCGTTGTGGATGGCTGTCTTCTaGTCTCTGGGCTCTTTCACCACCCTGACCTTCAGCCGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VSRPFSLRPLWMAVF*SLGSFTTLTFSRLL Trigger: GAGGAGCCGGCTGAAGGTCAGGGTGGTGAAAGAGCCCAGAGACAAGAAGACAGCCATCCACAACGGCCTCAGTGAAAATGGTCTGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS GCA 72 bp | GCAGGGTCCTGGATGTGCATGATGGTCTGCGGGTTCTaGAGCACGCAGGCCTTTGGTCCAAATGTTGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: AGSWMCMMVCGF*STQAFGPNVVT Trigger: AGTGACAACATTTGGACCAAAGGCCTGCGTGCTGCAGAACCCGCAGACCATCATGCACATCCAGGACCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
||
| CDS TCA 72 bp | ATCAAAAGACACCCATGCCGTGTTCCTGGCTTCCGGTaGCAGCATAATCTTCAGCTCGACCCCTGCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: IKRHPCRVPGFR*QHNLQLDPCRD Trigger: GTCCCTGCAGGGGTCGAGCTGAAGATTATGCTGTCACCGGAAGCCAGGAACACGGCATGGGTGTCTTTTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
||
| CDS TCA 72 bp | AGCACACTCTTGGGAGACTTGTTCCATGTCAACCGTTaGCTTGCAGGGTCCTGGATGTGCCAGACTCCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: STLLGDLFHVNR*LAGSWMCQTPG Trigger: ACCCGGAGTCTGGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGTCTCCCAAGAGTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105612.2 |
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| CDS GCA 72 bp | ACTCTTGGGAGACTTGTTCCATGTCAACCGTTGACTTaGAGGGTCCTGGATGTGCCAGACTCCGGGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TLGRLVPCQPLT*RVLDVPDSGFQ Trigger: CTGGAACCCGGAGTCTGGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGTCTCCCAAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105612.2 |
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| CDS CAA 72 bp | CACTCTTGGGAGACTTGTTCCATGTCAACCGTTGACTaGCAGGGTCCTGGATGTGCCAGACTCCGGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HSWETCSMSTVD*QGPGCARLRVP Trigger: TGGAACCCGGAGTCTGGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGTCTCCCAAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105612.2 |
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| CDS CAA 72 bp | AAGCACACTCTTGGGAGACTTGTTCCATGTCAACCGTaGACTTGCAGGGTCCTGGATGTGCCAGACTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: KHTLGRLVPCQP*TCRVLDVPDSG Trigger: CCCGGAGTCTGGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGTCTCCCAAGAGTGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105612.2 |
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| CDS TCA 72 bp | CCTGTTTTCCGCCCTCTGTGTCCAGACCATTTTCACTaGGGCCGTTGTGGATGGCTGTCTTCTTGTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PVFRPLCPDHFH*GRCGWLSSCLW Trigger: CCAGAGACAAGAAGACAGCCATCCACAACGGCCTCAGTGAAAATGGTCTGGACACAGAGGGCGGAAAACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS TCA 72 bp | AGCACACTCTTGGGAGACTTGTTCCATGTCAACCGTTaGCTTGCAGGGTCCTGGATGTGCATGATGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: STLLGDLFHVNR*LAGSWMCMMVC Trigger: GCAGACCATCATGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGTCTCCCAAGAGTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
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| CDS GCA 72 bp | ACTCTTGGGAGACTTGTTCCATGTCAACCGTTGACTTaGAGGGTCCTGGATGTGCATGATGGTCTGCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: TLGRLVPCQPLT*RVLDVHDGLRV Trigger: AACCCGCAGACCATCATGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGTCTCCCAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
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| CDS CAA 90 bp | CAGGATGACAGCGGCATTCCCCTCTATCACCTGATTCACTTGGGATaGGAAGTTCTCAAAGTTGAAGGGGGTCAGAAAGCCCAGGGATCC | + |
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Preference number: 6 (lower is better) Translates to: QDDSGIPLYHLIHLG*EVLKVEGGQKAQGS Trigger: GGATCCCTGGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATAGAGGGGAATGCCGCTGTCATCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS CAA 90 bp | GCTCCTCAGGATGACAGCGGCATTCCCCTCTATCACCTGATTCACTaGGGATTGGAAGTTCTCAAAGTTGAAGGGGGTCAGAAAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: APQDDSGIPLYHLIH*GLEVLKVEGGQKAQ Trigger: CTGGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATAGAGGGGAATGCCGCTGTCATCCTGAGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS CAA 72 bp | AAGCACACTCTTGGGAGACTTGTTCCATGTCAACCGTaGACTTGCAGGGTCCTGGATGTGCATGATGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: KHTLGRLVPCQP*TCRVLDVHDGL Trigger: CAGACCATCATGCACATCCAGGACCCTGCAAGTCAACGGTTGACATGGAACAAGTCTCCCAAGAGTGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030939.14 ENSMUST00000105613.10 |
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| CDS TCA 72 bp | TCACCTGATTCACTTGGGATTGGAAGTTCTCAAAGTTaGAGGGGGTCAGAAAGCCCAGGGATCCAAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SPDSLGIGSSQS*RGSESPGIQGG Trigger: TCCACCTTGGATCCCTGGGCTTTCTGACCCCCTTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS CAA 72 bp | AGCGGCATTCCCCTCTATCACCTGATTCACTTGGGATaGGAAGTTCTCAAAGTTGAAGGGGGTCAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SGIPLYHLIHLG*EVLKVEGGQKA Trigger: GGCTTTCTGACCCCCTTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATAGAGGGGAATGCCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS CAA 72 bp | GATGACAGCGGCATTCCCCTCTATCACCTGATTCACTaGGGATTGGAAGTTCTCAAAGTTGAAGGGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: DDSGIPLYHLIH*GLEVLKVEGGQ Trigger: CTGACCCCCTTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATAGAGGGGAATGCCGCTGTCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS CAA 90 bp | CAGAGCTCTTTGAAGGGCTGCAGTAAGCTGGCATCTCGGATCTTTTaGATGACAAGCACACTCTTGGGAGACTTGTTCCATGTCAACCGT | + |
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Preference number: 6 (lower is better) Translates to: QSSLKGCSKLASRIF*MTSTLLGDLFHVNR Trigger: ACGGTTGACATGGAACAAGTCTCCCAAGAGTGTGCTTGTCATCAAAAAGATCCGAGATGCCAGCTTACTGCAGCCCTTCAAAGAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS TCA 72 bp | CTCCTCAGGATGACAGCGGCATTCCCCTCTATCACCTaGTTCACTTGGGATTGGAAGTTCTCAAAGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLRMTAAFPSIT*FTWDWKFSKLK Trigger: CTTCAACTTTGAGAACTTCCAATCCCAAGTGAATCAGGTGATAGAGGGGAATGCCGCTGTCATCCTGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS GCA 72 bp | TCCTCCATGAGGTATATGCAGAGCTCTTTGAAGGGCTaGAGTAAGCTGGCATCTCGGATCTTTTTGATGACA | + |
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Preference number: 6 (lower is better) Translates to: SSMRYMQSSLKG*SKLASRIFLMT Trigger: TGTCATCAAAAAGATCCGAGATGCCAGCTTACTGCAGCCCTTCAAAGAGCTCTGCATATACCTCATGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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| CDS GCA 72 bp | TCTGGTTGGAAATGTCATCATAGTCTTCACGGAACGTaGAGAACTTCTTCTTCACTGGTCCAAAGTTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SGWKCHHSLHGT*RTSSSLVQSFH Trigger: ATGAAAACTTTGGACCAGTGAAGAAGAAGTTCTGCACGTTCCGTGAAGACTATGATGACATTTCCAACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030939.14 ENSMUST00000105612.2 ENSMUST00000105613.10 |
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